Clone Name | rbasd15b10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22 | 30 | 1.5 | 2 | SPR4_CAEEL (O17582) Suppressor of presenilin protein 4 | 29 | 3.3 |
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>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22| Length = 907 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -2 Query: 345 RGRSYSKSPVRARDDSPDAKGYRRSRS 265 RGRSYS+SP R R SP RR S Sbjct: 865 RGRSYSRSPSRTRSPSPAPSRRRRRDS 891
>SPR4_CAEEL (O17582) Suppressor of presenilin protein 4| Length = 1311 Score = 28.9 bits (63), Expect = 3.3 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +3 Query: 291 HQENHPWHGLVTCYSCDH 344 H + H W+ L CYSCD+ Sbjct: 1180 HLDRHGWNQLYKCYSCDY 1197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,104,075 Number of Sequences: 219361 Number of extensions: 632924 Number of successful extensions: 1102 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1075 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1101 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)