>HOLB_BUCAI (P57435) DNA polymerase III delta' subunit (EC 2.7.7.7)|
          Length = 326

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 109 QKKRMLLAMHER*PLGVGISASIWFLMIPMHXXISLKMGTFCELHGCSRDSAES 270
           QKK+   A+  + P G+G+S  IWF+   +     + + +  + HGC   SA +
Sbjct: 19  QKKKAHHAILIKTPRGIGVSLLIWFISKWLLCLKPIGLNSCDKCHGCKLMSANN 72

>ZAN_PIG (Q28983) Zonadhesin precursor|
          Length = 2476

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
 Frame = -1

Query: 440  PAAAATNNISS--PRVLPNGSDSEAQFPSELISSCVATILMIQXCTEKQ--YHPAEVAHI 273
            PA   + N  S  P  LP     E Q    ++S      L    CT ++  YHP   +  
Sbjct: 1470 PATCLSLNNPSYCPSTLPCAEGCECQ-KGHILSGTSCVPLSQCGCTTQRGSYHPVGESWY 1528

Query: 272  LDSALSRLXPCSSQN 228
             D++ SRL  CS+ N
Sbjct: 1529 TDNSCSRLCTCSAHN 1543


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,347,946
Number of Sequences: 219361
Number of extensions: 1133357
Number of successful extensions: 2764
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2764
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)