>TPC6B_HUMAN (Q86SZ2) Trafficking protein particle complex subunit 6B|
          Length = 158

 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 29/42 (69%), Positives = 37/42 (88%)
 Frame = -2

Query: 181 IKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLNRVS 56
           +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN FR L ++S
Sbjct: 65  MKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLTQMS 106

>TPC6B_MOUSE (Q9D289) Trafficking protein particle complex subunit 6B|
          Length = 158

 Score = 68.2 bits (165), Expect = 6e-12
 Identities = 29/42 (69%), Positives = 37/42 (88%)
 Frame = -2

Query: 181 IKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLNRVS 56
           +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN FR L ++S
Sbjct: 65  MKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLIQLS 106

>TRS33_YEAST (Q99394) Transport protein particle 33 kDa subunit (TRAPP 33 kDa|
           subunit)
          Length = 268

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 26/51 (50%), Positives = 35/51 (68%)
 Frame = -2

Query: 181 IKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLNRVSXDPAVENTD 29
           +KFIC+D W ++F KQIDNLKTNHRGTF L D  +R +   S +   +N +
Sbjct: 157 MKFICRDVWKQIFGKQIDNLKTNHRGTFYLLDYDYRPIQSFSLEEDAKNEE 207

>TPC6A_MOUSE (Q78XR0) Trafficking protein particle complex subunit 6A|
          Length = 159

 Score = 58.9 bits (141), Expect = 4e-09
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = -2

Query: 184 AIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLNRVSXDP 47
           A+KF+C+D W+ +F+K +D L+TNH+GT+VLQDN F  L  +   P
Sbjct: 65  ALKFLCRDLWAAMFQKHMDGLRTNHQGTYVLQDNSFPLLVTMGSGP 110

>YA95_SCHPO (Q09784) Hypothetical protein C13G6.05c in chromosome I|
          Length = 245

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 21/53 (39%), Positives = 33/53 (62%)
 Frame = -2

Query: 181 IKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLNRVSXDPAVENTDAT 23
           ++F+C++ W  +F+K +DNLKTN RG FVL D +F W  +++     E    T
Sbjct: 72  MRFLCRELWPIVFRKPLDNLKTNRRGIFVLTDTYFYWFTKMTAMTGTEMAQIT 124

>Y414_MYCGE (P47653) Hypothetical protein MG414|
          Length = 1036

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 157 WSELFKKQIDNLKTNHRGTFVLQDNHFRWLNRV 59
           WSEL  K  DN K       +++DN+F W N +
Sbjct: 84  WSELVNKYSDNYKQ------IIRDNNFHWYNNI 110


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,265,311
Number of Sequences: 219361
Number of extensions: 275226
Number of successful extensions: 712
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 80,573,946
effective HSP length: 38
effective length of database: 72,238,228
effective search space used: 1733717472
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)