ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14k22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018439.1| Zea mays clone EL01N0372H05.d mRNA sequence 363 5e-97
2ref|NM_197772.1| Oryza sativa (japonica cultivar-group) putative... 335 1e-88
3gb|AY104046.1| Zea mays PCO084385 mRNA sequence 331 2e-87
4gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 170 4e-39
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 170 4e-39
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 170 4e-39
7dbj|AK139061.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 46 0.15
8dbj|AK015617.1| Mus musculus adult male testis cDNA, RIKEN full-... 46 0.15
9gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, comp... 46 0.15
10ref|NM_029144.1| Mus musculus RIKEN cDNA 4930503B20 gene (493050... 46 0.15
11ref|NM_197080.1| Oryza sativa (japonica cultivar-group) hypothet... 44 0.61
12gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 gen... 44 0.61
13gb|AY854330.1| Uncultured bacterium clone Thompsons42 16S riboso... 42 2.4
14dbj|AB185704.1| Uncultured rumen bacterium gene for 16S rRNA, pa... 42 2.4
15dbj|AB185692.1| Uncultured rumen bacterium gene for 16S rRNA, pa... 42 2.4
16dbj|AB185673.1| Uncultured rumen bacterium gene for 16S rRNA, pa... 42 2.4
17dbj|AB185662.1| Uncultured rumen bacterium gene for 16S rRNA, pa... 42 2.4
18emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 42 2.4
19gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
20gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
21gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 9.5
22ref|XM_954828.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.5
23ref|XM_331052.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.5
24ref|XM_749567.1| Aspergillus fumigatus Af293 t-complex protein 1... 40 9.5
25gb|AC011288.4| Homo sapiens BAC clone RP11-27B1 from 7, complete... 40 9.5
26emb|BX908789.1| Neurospora crassa DNA linkage group VII BAC clon... 40 9.5
27emb|AL929355.1|PFA929355 Plasmodium falciparum strain 3D7, chrom... 40 9.5
28emb|BX901956.4| Zebrafish DNA sequence from clone CH211-284C12 i... 40 9.5
29gb|AC155834.6| Mus musculus 10 BAC RP24-93K4 (Roswell Park Cance... 40 9.5
30gb|AC020895.8| Homo sapiens chromosome 19 clone CTC-312O10, comp... 40 9.5
31gb|AC153876.8| Mus musculus 10 BAC RP23-218D7 (Roswell Park Canc... 40 9.5
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
33gb|DQ217942.1| Homo sapiens EGF-like module containing mucin-lik... 40 9.5
34gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Canc... 40 9.5
35emb|AL954713.11| Mouse DNA sequence from clone RP23-463K8 on chr... 40 9.5
36emb|AL935200.9| Zebrafish DNA sequence from clone CH211-237I5, c... 40 9.5
37emb|AL845366.6| Zebrafish DNA sequence from clone CH211-167C22 i... 40 9.5
38gb|AC171336.3| Mus musculus BAC RP24-286O17 (Roswell Park Cance... 40 9.5
39dbj|AB065918.1| Homo sapiens gene for seven transmembrane helix ... 40 9.5 
>gb|BT018439.1| Zea mays clone EL01N0372H05.d mRNA sequence
          Length = 1397

 Score =  363 bits (183), Expect = 5e-97
 Identities = 420/498 (84%), Gaps = 7/498 (1%)
 Strand = Plus / Plus

                                                                       
Query: 200 atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 259
           ||||| ||||||||||||||||| || || || ||||  ||||||||||| || | ||||
Sbjct: 369 atgctagaataagatggcagtgatgacgaaggataggtggagctgccatattgtgagtag 428

                                                                       
Query: 260 ctggacctatataacggatctaatcctgc------ataactgctcctcacaggttctctg 313
           ||||||||||| |  | ||||||||||||      ||||||||| || |||||||||| |
Sbjct: 429 ctggacctatacagtgaatctaatcctgctcccacataactgcttctgacaggttctcgg 488

                                                                       
Query: 314 tgcgcagccagggaatcctggataagctgttgggcagattgtacctgggacgacgtcccc 373
           || |||||||  || |||||||| ||||| || |||| ||||||||| || || ||||||
Sbjct: 489 tgtgcagccaacgagtcctggatgagctgctgtgcagcttgtacctgtgaagatgtcccc 548

                                                                       
Query: 374 tttatttcaacagttatatcatcagggcttcccaaactctcttgaattgtgacaacagca 433
           |||||||||||||| |||||||| || || ||||||||||| |||||||| |||||||| 
Sbjct: 549 tttatttcaacagtaatatcatctggactacccaaactctcctgaattgtaacaacagct 608

                                                                       
Query: 434 ccactgttagcccgtatgtatgcaatgtttgctcctttgacccctatgatatcttccgca 493
           ||||| ||||| |||||||| ||||| ||||||||||| || ||||| || ||||| |||
Sbjct: 609 ccactattagctcgtatgtacgcaatatttgctcctttaactcctataatgtcttcagca 668

                                                                       
Query: 494 tatgtaagtgggatttgcatggtttgtgttatctgcgtaagtagagggccagcaccatgc 553
           || ||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| 
Sbjct: 669 taggtaagtgggatttgcatggtttgggttatctgtgtaagtagcgggccagcaccatgt 728

                                                                       
Query: 554 attccagaaggccgtaatgctgacaatgcaggatctcgtccatatagtgacacgcctgag 613
           |||||||  || |||| || |||||| || ||||| || ||||| ||||| |||||||||
Sbjct: 729 attccaggtggtcgtagtgttgacaaggctggatcccgcccataaagtgatacgcctgag 788

                                                                       
Query: 614 cgatgaatgttatgttctaccagcggtttcgcgttcaagatacaaatggtcccttttcat 673
           |||||||||||||| |||| ||  || ||| |||||||||||||||   ||||| |||| 
Sbjct: 789 cgatgaatgttatgatctaacaaagg-ttctcgttcaagatacaaagtatccctcttcac 847

                             
Query: 674 tggaagaacatattcatc 691
           |||||||| |||||||||
Sbjct: 848 tggaagaatatattcatc 865
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>ref|NM_197772.1| Oryza sativa (japonica cultivar-group) putative nucleic acid binding
            protein (OSJNBa0027P10.5), mRNA
          Length = 1377

 Score =  335 bits (169), Expect = 1e-88
 Identities = 463/561 (82%), Gaps = 10/561 (1%)
 Strand = Plus / Minus

                                                                        
Query: 140  tagtaccggtaagtggaaccgtaaccaccaagacctgaagacgaatatccactcccgtcc 199
            |||||||||||||  || || || ||||| |||||||||||||||||||||| ||| |||
Sbjct: 1376 tagtaccggtaagatgacccatatccaccgagacctgaagacgaatatccacccccatcc 1317

                                                                        
Query: 200  atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 259
            ||||| ||||| ||||||| |||||| ||||| |||| ||||||||||||||| |  |||
Sbjct: 1316 atgctagaatacgatggcaatgacgacgacggataggtcgagctgccatactgtgaatag 1257

                                                                        
Query: 260  ctggacctatataacggatctaatcctgcataactgctcctcacaggttctctgtgcgca 319
            || | ||||||||  ||||||||||||||||| |||||||| ||||  || || || || 
Sbjct: 1256 cttggcctatatactggatctaatcctgcatagctgctcctgacagaatccctatgtgcc 1197

                                                                        
Query: 320  gccagggaatcctggataagctgttgggcagattgtacctgggacgacgtcccctttatt 379
            ||||| ||||||||||| || || | ||||| |||||| || || || |||||||| |||
Sbjct: 1196 gccagagaatcctggatgagttgataggcagcttgtacttgtgatgatgtccccttcatt 1137

                                                                        
Query: 380  tcaacagttatatcatcagggcttcccaaactctcttgaattgtgacaacagcaccactg 439
            |||||||| ||||| |||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 1136 tcaacagtaatatcgtcagggctccccaaactctcttgaattgtgacgactgcaccactg 1077

                                                                        
Query: 440  ttagcccgtatgtatgcaatgtttgctcctttgacccctatgatatcttccgcatatgta 499
            ||||| |||||||||||||| ||||||||||| || || || || ||||| || || |||
Sbjct: 1076 ttagctcgtatgtatgcaatatttgctcctttcactccaattatgtcttcagcgtaggta 1017

                                                                        
Query: 500  agtgggatttgcatggtttgtgttatctgcgtaagtagagggccagc---------acca 550
            || || |||||||| ||||| |||||||| | ||||||||||||| |         ||||
Sbjct: 1016 aggggaatttgcattgtttgagttatctgtgaaagtagagggccaccaggtccaccacca 957

                                                                        
Query: 551  tgcattccagaaggccgtaatgctgacaatgcaggatctcgtccatatagtgacacgcct 610
            || |||||||| |  ||||||| |||||| |||||||| || ||||| || || || |||
Sbjct: 956  tgtattccagaggttcgtaatgttgacaaggcaggatcccgcccataaagcgaaacacct 897

                                                                        
Query: 611  gagcgatgaatgttatgttctaccagcggtttcgcgttcaagatacaaatggtccctttt 670
            ||||||||||| || || |||| ||  || ||| ||||| ||| ||| | |||| || ||
Sbjct: 896  gagcgatgaatattgtggtctatcaatgg-ttcccgttcgagaaacagagggtctctctt 838

                                 
Query: 671  cattggaagaacatattcatc 691
            ||||||||||| |||||||||
Sbjct: 837  cattggaagaatatattcatc 817
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>gb|AY104046.1| Zea mays PCO084385 mRNA sequence
          Length = 1747

 Score =  331 bits (167), Expect = 2e-87
 Identities = 373/442 (84%), Gaps = 6/442 (1%)
 Strand = Plus / Minus

                                                                        
Query: 200  atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 259
            ||||| ||||||||||||||||| || || || ||||  ||||||||||| || | ||||
Sbjct: 1431 atgctagaataagatggcagtgatgacgaaggataggtggagctgccatattgtgagtag 1372

                                                                        
Query: 260  ctggacctatataacggatctaatcctgc------ataactgctcctcacaggttctctg 313
            ||||||||||| |  | ||||||||||||      ||||||||| || |||||||||| |
Sbjct: 1371 ctggacctatacagtgaatctaatcctgctcccacataactgcttctgacaggttctcgg 1312

                                                                        
Query: 314  tgcgcagccagggaatcctggataagctgttgggcagattgtacctgggacgacgtcccc 373
            || |||||||  || |||||||| ||||| || |||| ||||||||| || || ||||||
Sbjct: 1311 tgtgcagccaacgagtcctggatgagctgctgtgcagcttgtacctgtgaagatgtcccc 1252

                                                                        
Query: 374  tttatttcaacagttatatcatcagggcttcccaaactctcttgaattgtgacaacagca 433
            |||||||||||||| |||||||| || || ||||||||||| |||||||| |||||||| 
Sbjct: 1251 tttatttcaacagtaatatcatctggactacccaaactctcctgaattgtaacaacagcc 1192

                                                                        
Query: 434  ccactgttagcccgtatgtatgcaatgtttgctcctttgacccctatgatatcttccgca 493
            ||||| ||||| |||||||| ||||| ||||||||||| || ||||| || ||||| |||
Sbjct: 1191 ccactattagctcgtatgtacgcaatatttgctcctttaactcctataatgtcttcagca 1132

                                                                        
Query: 494  tatgtaagtgggatttgcatggtttgtgttatctgcgtaagtagagggccagcaccatgc 553
            || ||||||||||||||||||||||| |||||||| |||||||| | |||||||||||| 
Sbjct: 1131 taggtaagtgggatttgcatggtttgggttatctgtgtaagtagtgagccagcaccatgt 1072

                                                                        
Query: 554  attccagaaggccgtaatgctgacaatgcaggatctcgtccatatagtgacacgcctgag 613
            | | |||| || |||| || |||||| || ||||| || ||||| ||||| |||||||||
Sbjct: 1071 actgcagagggtcgtagtgttgacaaggctggatcacgcccataaagtgatacgcctgag 1012

                                  
Query: 614  cgatgaatgttatgttctacca 635
            |||||||||||||| |||||||
Sbjct: 1011 cgatgaatgttatgatctacca 990
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>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score =  170 bits (86), Expect = 4e-39
 Identities = 161/186 (86%)
 Strand = Plus / Minus

                                                                         
Query: 346   ggcagattgtacctgggacgacgtcccctttatttcaacagttatatcatcagggcttcc 405
             ||||| |||||| || || || |||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 72444 ggcagcttgtacttgtgatgatgtccccttcatttcaacagtaatatcgtcagggctccc 72385

                                                                         
Query: 406   caaactctcttgaattgtgacaacagcaccactgttagcccgtatgtatgcaatgtttgc 465
             ||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||
Sbjct: 72384 caaactctcttgaattgtgacgactgcaccactgttagctcgtatgtatgcaatatttgc 72325

                                                                         
Query: 466   tcctttgacccctatgatatcttccgcatatgtaagtgggatttgcatggtttgtgttat 525
             |||||| || || || || ||||| || || ||||| || |||||||| ||||| |||||
Sbjct: 72324 tcctttcactccaattatgtcttcagcgtaggtaaggggaatttgcattgtttgagttat 72265

                   
Query: 526   ctgcgt 531
             ||||||
Sbjct: 72264 ctgcgt 72259



 Score =  147 bits (74), Expect = 6e-32
 Identities = 143/166 (86%)
 Strand = Plus / Minus

                                                                         
Query: 140   tagtaccggtaagtggaaccgtaaccaccaagacctgaagacgaatatccactcccgtcc 199
             |||||||||||||  || || || ||||| |||||||||||||||||||||| ||| |||
Sbjct: 72740 tagtaccggtaagatgacccatatccaccgagacctgaagacgaatatccacccccatcc 72681

                                                                         
Query: 200   atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 259
             ||||| ||||| ||||||| |||||| ||||| |||| ||||||||||||||| |  |||
Sbjct: 72680 atgctagaatacgatggcaatgacgacgacggataggtcgagctgccatactgtgaatag 72621

                                                           
Query: 260   ctggacctatataacggatctaatcctgcataactgctcctcacag 305
             || | ||||||||  ||||||||||||||||| |||||||| ||||
Sbjct: 72620 cttggcctatatactggatctaatcctgcatagctgctcctgacag 72575



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 119/146 (81%), Gaps = 1/146 (0%)
 Strand = Plus / Minus

                                                                         
Query: 546   caccatgcattccagaaggccgtaatgctgacaatgcaggatctcgtccatatagtgaca 605
             ||||||| |||||||| |  ||||||| |||||| |||||||| || ||||| || || |
Sbjct: 72003 caccatgtattccagaggttcgtaatgttgacaaggcaggatcccgcccataaagcgaaa 71944

                                                                         
Query: 606   cgcctgagcgatgaatgttatgttctaccagcggtttcgcgttcaagatacaaatggtcc 665
             | |||||||||||||| || || |||| ||  || ||| ||||| ||| ||| | |||| 
Sbjct: 71943 cacctgagcgatgaatattgtggtctatcaatgg-ttcccgttcgagaaacagagggtct 71885

                                       
Query: 666   cttttcattggaagaacatattcatc 691
             || ||||||||||||| |||||||||
Sbjct: 71884 ctcttcattggaagaatatattcatc 71859
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  170 bits (86), Expect = 4e-39
 Identities = 161/186 (86%)
 Strand = Plus / Minus

                                                                            
Query: 346      ggcagattgtacctgggacgacgtcccctttatttcaacagttatatcatcagggcttcc 405
                ||||| |||||| || || || |||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 21757761 ggcagcttgtacttgtgatgatgtccccttcatttcaacagtaatatcgtcagggctccc 21757702

                                                                            
Query: 406      caaactctcttgaattgtgacaacagcaccactgttagcccgtatgtatgcaatgtttgc 465
                ||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||
Sbjct: 21757701 caaactctcttgaattgtgacgactgcaccactgttagctcgtatgtatgcaatatttgc 21757642

                                                                            
Query: 466      tcctttgacccctatgatatcttccgcatatgtaagtgggatttgcatggtttgtgttat 525
                |||||| || || || || ||||| || || ||||| || |||||||| ||||| |||||
Sbjct: 21757641 tcctttcactccaattatgtcttcagcgtaggtaaggggaatttgcattgtttgagttat 21757582

                      
Query: 526      ctgcgt 531
                ||||||
Sbjct: 21757581 ctgcgt 21757576



 Score =  147 bits (74), Expect = 6e-32
 Identities = 143/166 (86%)
 Strand = Plus / Minus

                                                                            
Query: 140      tagtaccggtaagtggaaccgtaaccaccaagacctgaagacgaatatccactcccgtcc 199
                |||||||||||||  || || || ||||| |||||||||||||||||||||| ||| |||
Sbjct: 21758057 tagtaccggtaagatgacccatatccaccgagacctgaagacgaatatccacccccatcc 21757998

                                                                            
Query: 200      atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 259
                ||||| ||||| ||||||| |||||| ||||| |||| ||||||||||||||| |  |||
Sbjct: 21757997 atgctagaatacgatggcaatgacgacgacggataggtcgagctgccatactgtgaatag 21757938

                                                              
Query: 260      ctggacctatataacggatctaatcctgcataactgctcctcacag 305
                || | ||||||||  ||||||||||||||||| |||||||| ||||
Sbjct: 21757937 cttggcctatatactggatctaatcctgcatagctgctcctgacag 21757892



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 119/146 (81%), Gaps = 1/146 (0%)
 Strand = Plus / Minus

                                                                            
Query: 546      caccatgcattccagaaggccgtaatgctgacaatgcaggatctcgtccatatagtgaca 605
                ||||||| |||||||| |  ||||||| |||||| |||||||| || ||||| || || |
Sbjct: 21757320 caccatgtattccagaggttcgtaatgttgacaaggcaggatcccgcccataaagcgaaa 21757261

                                                                            
Query: 606      cgcctgagcgatgaatgttatgttctaccagcggtttcgcgttcaagatacaaatggtcc 665
                | |||||||||||||| || || |||| ||  || ||| ||||| ||| ||| | |||| 
Sbjct: 21757260 cacctgagcgatgaatattgtggtctatcaatgg-ttcccgttcgagaaacagagggtct 21757202

                                          
Query: 666      cttttcattggaagaacatattcatc 691
                || ||||||||||||| |||||||||
Sbjct: 21757201 ctcttcattggaagaatatattcatc 21757176



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 210      aagatggcagtgacgatgacgg 231
                ||||||||||||||||||||||
Sbjct: 17870645 aagatggcagtgacgatgacgg 17870666
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  170 bits (86), Expect = 4e-39
 Identities = 161/186 (86%)
 Strand = Plus / Minus

                                                                            
Query: 346      ggcagattgtacctgggacgacgtcccctttatttcaacagttatatcatcagggcttcc 405
                ||||| |||||| || || || |||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 21769424 ggcagcttgtacttgtgatgatgtccccttcatttcaacagtaatatcgtcagggctccc 21769365

                                                                            
Query: 406      caaactctcttgaattgtgacaacagcaccactgttagcccgtatgtatgcaatgtttgc 465
                ||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||
Sbjct: 21769364 caaactctcttgaattgtgacgactgcaccactgttagctcgtatgtatgcaatatttgc 21769305

                                                                            
Query: 466      tcctttgacccctatgatatcttccgcatatgtaagtgggatttgcatggtttgtgttat 525
                |||||| || || || || ||||| || || ||||| || |||||||| ||||| |||||
Sbjct: 21769304 tcctttcactccaattatgtcttcagcgtaggtaaggggaatttgcattgtttgagttat 21769245

                      
Query: 526      ctgcgt 531
                ||||||
Sbjct: 21769244 ctgcgt 21769239



 Score =  147 bits (74), Expect = 6e-32
 Identities = 143/166 (86%)
 Strand = Plus / Minus

                                                                            
Query: 140      tagtaccggtaagtggaaccgtaaccaccaagacctgaagacgaatatccactcccgtcc 199
                |||||||||||||  || || || ||||| |||||||||||||||||||||| ||| |||
Sbjct: 21769720 tagtaccggtaagatgacccatatccaccgagacctgaagacgaatatccacccccatcc 21769661

                                                                            
Query: 200      atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 259
                ||||| ||||| ||||||| |||||| ||||| |||| ||||||||||||||| |  |||
Sbjct: 21769660 atgctagaatacgatggcaatgacgacgacggataggtcgagctgccatactgtgaatag 21769601

                                                              
Query: 260      ctggacctatataacggatctaatcctgcataactgctcctcacag 305
                || | ||||||||  ||||||||||||||||| |||||||| ||||
Sbjct: 21769600 cttggcctatatactggatctaatcctgcatagctgctcctgacag 21769555



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 119/146 (81%), Gaps = 1/146 (0%)
 Strand = Plus / Minus

                                                                            
Query: 546      caccatgcattccagaaggccgtaatgctgacaatgcaggatctcgtccatatagtgaca 605
                ||||||| |||||||| |  ||||||| |||||| |||||||| || ||||| || || |
Sbjct: 21768983 caccatgtattccagaggttcgtaatgttgacaaggcaggatcccgcccataaagcgaaa 21768924

                                                                            
Query: 606      cgcctgagcgatgaatgttatgttctaccagcggtttcgcgttcaagatacaaatggtcc 665
                | |||||||||||||| || || |||| ||  || ||| ||||| ||| ||| | |||| 
Sbjct: 21768923 cacctgagcgatgaatattgtggtctatcaatgg-ttcccgttcgagaaacagagggtct 21768865

                                          
Query: 666      cttttcattggaagaacatattcatc 691
                || ||||||||||||| |||||||||
Sbjct: 21768864 ctcttcattggaagaatatattcatc 21768839



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 210      aagatggcagtgacgatgacgg 231
                ||||||||||||||||||||||
Sbjct: 17879898 aagatggcagtgacgatgacgg 17879919
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>dbj|AK139061.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730011B16
            product:unclassifiable, full insert sequence
          Length = 3175

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 293  ctgctcctcacaggttctctgtg 315
            |||||||||||||||||||||||
Sbjct: 1748 ctgctcctcacaggttctctgtg 1770
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>dbj|AK015617.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930483N21 product:similar to DNAJ-LIKE
            PROTEIN [Rattus norvegicus], full insert sequence
          Length = 1614

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 293  ctgctcctcacaggttctctgtg 315
            |||||||||||||||||||||||
Sbjct: 1026 ctgctcctcacaggttctctgtg 1004
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>gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, complete sequence
          Length = 209209

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 293    ctgctcctcacaggttctctgtg 315
              |||||||||||||||||||||||
Sbjct: 150212 ctgctcctcacaggttctctgtg 150190
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>ref|NM_029144.1| Mus musculus RIKEN cDNA 4930503B20 gene (4930503B20Rik), mRNA
          Length = 1614

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 293  ctgctcctcacaggttctctgtg 315
            |||||||||||||||||||||||
Sbjct: 1026 ctgctcctcacaggttctctgtg 1004
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>ref|NM_197080.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0029C15.20), mRNA
          Length = 225

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 210 aagatggcagtgacgatgacgg 231
           ||||||||||||||||||||||
Sbjct: 146 aagatggcagtgacgatgacgg 167
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>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete
             sequence
          Length = 148816

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 210   aagatggcagtgacgatgacgg 231
             ||||||||||||||||||||||
Sbjct: 61396 aagatggcagtgacgatgacgg 61375
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>gb|AY854330.1| Uncultured bacterium clone Thompsons42 16S ribosomal RNA gene,
           partial sequence
          Length = 1535

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 462 ttgctcctttgacccctatga 482
           |||||||||||||||||||||
Sbjct: 232 ttgctcctttgacccctatga 212
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>dbj|AB185704.1| Uncultured rumen bacterium gene for 16S rRNA, partial sequence,
           clone: U28-E06
          Length = 1548

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 462 ttgctcctttgacccctatga 482
           |||||||||||||||||||||
Sbjct: 235 ttgctcctttgacccctatga 215
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>dbj|AB185692.1| Uncultured rumen bacterium gene for 16S rRNA, partial sequence,
           clone: U28-D06
          Length = 1541

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 462 ttgctcctttgacccctatga 482
           |||||||||||||||||||||
Sbjct: 234 ttgctcctttgacccctatga 214
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>dbj|AB185673.1| Uncultured rumen bacterium gene for 16S rRNA, partial sequence,
           clone: U28-B07
          Length = 1547

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 462 ttgctcctttgacccctatga 482
           |||||||||||||||||||||
Sbjct: 235 ttgctcctttgacccctatga 215
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>dbj|AB185662.1| Uncultured rumen bacterium gene for 16S rRNA, partial sequence,
           clone: U28-A07
          Length = 1546

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 462 ttgctcctttgacccctatga 482
           |||||||||||||||||||||
Sbjct: 235 ttgctcctttgacccctatga 215
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 376    tatttcaacagttatatcatcaggg 400
              |||||||||||||||||||| ||||
Sbjct: 239710 tatttcaacagttatatcattaggg 239734
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
              complete sequence
          Length = 156772

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    atccactcccgtccatgctt 205
              ||||||||||||||||||||
Sbjct: 145515 atccactcccgtccatgctt 145496
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>gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0672D07,
             complete sequence
          Length = 136465

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   atccactcccgtccatgctt 205
             ||||||||||||||||||||
Sbjct: 13643 atccactcccgtccatgctt 13624
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 314     tgcgcagccagggaatcctg 333
               ||||||||||||||||||||
Sbjct: 2015864 tgcgcagccagggaatcctg 2015883
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>ref|XM_954828.1| Neurospora crassa OR74A hypothetical protein (NCU02277.1) partial
           mRNA
          Length = 714

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 469 tttgacccctatgatatctt 488
           ||||||||||||||||||||
Sbjct: 274 tttgacccctatgatatctt 293
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>ref|XM_331052.1| Neurospora crassa OR74A hypothetical protein (NCU02277.1) partial
           mRNA
          Length = 714

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 469 tttgacccctatgatatctt 488
           ||||||||||||||||||||
Sbjct: 274 tttgacccctatgatatctt 293
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>ref|XM_749567.1| Aspergillus fumigatus Af293 t-complex protein 1, subunit zeta
            (Afu3g09590) partial mRNA
          Length = 1623

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 317  gcagccagggaatcctggat 336
            ||||||||||||||||||||
Sbjct: 1403 gcagccagggaatcctggat 1384
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>gb|AC011288.4| Homo sapiens BAC clone RP11-27B1 from 7, complete sequence
          Length = 159722

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   aactctcttgaattgtgaca 427
             ||||||||||||||||||||
Sbjct: 37880 aactctcttgaattgtgaca 37861
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>emb|BX908789.1| Neurospora crassa DNA linkage group VII BAC clone B13D24
          Length = 107482

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   tttgacccctatgatatctt 488
             ||||||||||||||||||||
Sbjct: 11125 tttgacccctatgatatctt 11106
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>emb|AL929355.1|PFA929355 Plasmodium falciparum strain 3D7, chromosome 9; segment 1/5
          Length = 330050

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   tttcaacagttatatcatca 397
             ||||||||||||||||||||
Sbjct: 94999 tttcaacagttatatcatca 94980
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>emb|BX901956.4| Zebrafish DNA sequence from clone CH211-284C12 in linkage group 3,
              complete sequence
          Length = 197042

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    ctaccagctagtaccggtaa 151
              ||||||||||||||||||||
Sbjct: 158019 ctaccagctagtaccggtaa 158038
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>gb|AC155834.6| Mus musculus 10 BAC RP24-93K4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 164109

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   tatttcaacagttatatcat 395
             ||||||||||||||||||||
Sbjct: 87019 tatttcaacagttatatcat 87038
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>gb|AC020895.8| Homo sapiens chromosome 19 clone CTC-312O10, complete sequence
          Length = 139846

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   atgcaatgtttgctcctttg 472
             ||||||||||||||||||||
Sbjct: 67068 atgcaatgtttgctcctttg 67087
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>gb|AC153876.8| Mus musculus 10 BAC RP23-218D7 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 217077

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 395   tcagggcttcccaaactctcttga 418
             |||| |||||||||||||||||||
Sbjct: 81470 tcagagcttcccaaactctcttga 81447
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 186     atccactcccgtccatgctt 205
               ||||||||||||||||||||
Sbjct: 4259036 atccactcccgtccatgctt 4259017
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>gb|DQ217942.1| Homo sapiens EGF-like module containing mucin-like hormone
             receptor-like 1 (EMR1) gene, complete cds
          Length = 55525

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   atgcaatgtttgctcctttg 472
             ||||||||||||||||||||
Sbjct: 22196 atgcaatgtttgctcctttg 22215
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>gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166966

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    aactctcttgaattgtgaca 427
              ||||||||||||||||||||
Sbjct: 158938 aactctcttgaattgtgaca 158957
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>emb|AL954713.11| Mouse DNA sequence from clone RP23-463K8 on chromosome 2, complete
             sequence
          Length = 171734

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 205   tgaataagatggcagtgacgatga 228
             ||||||||||||| ||||||||||
Sbjct: 90666 tgaataagatggcggtgacgatga 90689
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>emb|AL935200.9| Zebrafish DNA sequence from clone CH211-237I5, complete sequence
          Length = 160710

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   ctaccagctagtaccggtaa 151
             ||||||||||||||||||||
Sbjct: 66956 ctaccagctagtaccggtaa 66937
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>emb|AL845366.6| Zebrafish DNA sequence from clone CH211-167C22 in linkage group 20,
             complete sequence
          Length = 149189

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 543   cagcaccatgcattccagaa 562
             ||||||||||||||||||||
Sbjct: 52956 cagcaccatgcattccagaa 52937
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>gb|AC171336.3| Mus musculus  BAC RP24-286O17 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 164528

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    tatttcaacagttatatcat 395
              ||||||||||||||||||||
Sbjct: 137860 tatttcaacagttatatcat 137879
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>dbj|AB065918.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds,
             isolate:CBRC7TM_481
          Length = 49228

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   atgcaatgtttgctcctttg 472
             ||||||||||||||||||||
Sbjct: 18499 atgcaatgtttgctcctttg 18518


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,899,195
Number of Sequences: 3902068
Number of extensions: 4899195
Number of successful extensions: 76038
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75844
Number of HSP's gapped (non-prelim): 189
length of query: 694
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 671
effective length of database: 17,143,297,704
effective search space: 11503152759384
effective search space used: 11503152759384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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