>UL52_SHV21 (P14346) Helicase/primase complex protein (Probable DNA replication|
           gene 56 protein)
          Length = 835

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 52  ELLCRYTQTS--NSYPVHKCIIAPSLIG-RQSSCSPWACWAG 168
           ++L  Y +++   +Y  HKCI  P LIG     C+ +  WAG
Sbjct: 316 DMLTYYNKSTYLKTYITHKCIHLPDLIGYAPQDCTSFVYWAG 357

>DUFFY_GORGO (Q95LF9) Duffy antigen/chemokine receptor (CD234 antigen)|
          Length = 336

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
 Frame = +3

Query: 138 QLLTMGLLGWFGHWRGVAQGTGLTRXRCWAAVASWSGSA--HAPLVLEVNASGGRCLP 305
           Q L +G     GH  G  Q  GLT       V  W  +A    P+ L   ASGG C P
Sbjct: 143 QALLLGCHASLGHRLGAGQVPGLTLG---LTVGIWGVAALLTLPVTLASGASGGLCTP 197

>RL10_NITOC (Q3J8Q5) 50S ribosomal protein L10|
          Length = 186

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 246 GSAHAPLVLEVNASGGRCLPPDPXEEATWMHDSATSSAM 362
           G  H  LV+++   GGR LPP+  E    M     + AM
Sbjct: 111 GKEHPKLVVKMGCLGGRLLPPEGVENLAKMPTKEQAVAM 149

>BCAS1_HUMAN (O75363) Breast carcinoma amplified sequence 1 (Novel amplified in|
           breast cancer 1) (Amplified and overexpressed in breast
           cancer)
          Length = 584

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 16/67 (23%), Positives = 24/67 (35%)
 Frame = -2

Query: 308 GRETTPTAGVDLKHQRCMXXXXXXXXXXXXXXPCQPSALCYPSPVPKPAQQAHGEQLLCL 129
           G E +PT   DLK  +                 C PS        P+PA++   E+    
Sbjct: 310 GAEKSPTTSADLKSDKANFTSQETQGAGKNSKGCNPSGHTQSVTTPEPAKEGTKEKSGPT 369

Query: 128 PIKLGAI 108
            + LG +
Sbjct: 370 SLPLGKL 376


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,486,763
Number of Sequences: 219361
Number of extensions: 971078
Number of successful extensions: 2817
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2816
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)