ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14k15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550136.1| Oryza sativa (japonica cultivar-group), mRNA 335 1e-88
2gb|BT017853.1| Zea mays clone EL01N0511C02.c mRNA sequence 335 1e-88
3dbj|AK121921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 335 1e-88
4gb|AY104326.1| Zea mays PCO064465 mRNA sequence 313 4e-82
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
6dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
7dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
8ref|NM_102946.3| Arabidopsis thaliana unknown protein AT1G32130 ... 62 3e-06
9gb|AC084165.1|AC084165 Arabidopsis thaliana chromosome 1 BAC F3C... 46 0.15
10ref|XM_483143.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.60
11ref|XM_483144.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.60
12gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8 44 0.60
13gb|AC009041.10| Homo sapiens chromosome 16 clone RP11-161M6, com... 44 0.60
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
15dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
16dbj|AK067229.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
17dbj|AK067381.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
18gb|AF251068.2| Oryza sativa (japonica cultivar-group) alkaline a... 44 0.60
19emb|AL024496.7|HS422E10 Human DNA sequence from clone LA16-422E1... 44 0.60
20gb|AC163617.5| Mus musculus BAC clone RP23-115O21 from chromosom... 42 2.4
21gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 2.4
22gb|AC150391.2| Branchiostoma floridae clone CH302-119J21, comple... 42 2.4
23gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
24gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequ... 42 2.4
25gb|AC155810.5| Mus musculus BAC clone RP24-181I18 from chromosom... 42 2.4
26emb|BX088524.16| Zebrafish DNA sequence from clone CH211-215A9 i... 42 2.4
27dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
28emb|CR627488.8| Zebrafish DNA sequence from clone CH211-242B23 i... 42 2.4
29ref|XM_457530.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 9.4
30ref|NM_003922.2| Homo sapiens hect (homologous to the E6-AP (UBE... 40 9.4
31ref|XM_706922.1| Candida albicans SC5314 hypothetical protein (C... 40 9.4
32ref|XM_706901.1| Candida albicans SC5314 hypothetical protein (C... 40 9.4
33gb|AC112671.25| Mus musculus chromosome 13, clone RP24-299O19, c... 40 9.4
34ref|XM_745837.1| Aspergillus fumigatus Af293 hypothetical protei... 40 9.4
35gb|AC124362.3| Mus musculus BAC clone RP24-528N1 from chromosome... 40 9.4
36gb|AC073236.8| Homo sapiens BAC clone RP11-774B15 from 7, comple... 40 9.4
37emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS... 40 9.4
38emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 9.4
39gb|BC040929.1| Homo sapiens hect (homologous to the E6-AP (UBE3A... 40 9.4
40gb|AC022239.16| Homo sapiens chromosome 8, clone RP11-148O21, co... 40 9.4
41gb|AC122110.4| Mus Musculus Strain C57BL6/J Chromosome 2 BAC, RP... 40 9.4
42gb|U50078.1|HSU50078 Human guanine nucleotide exchange factor p5... 40 9.4
43gb|AY275833.1| Homo sapiens polymerase (DNA directed), alpha (PO... 40 9.4
44gb|AC154706.2| Mus musculus BAC clone RP23-132D23 from chromosom... 40 9.4
45gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, comple... 40 9.4
46gb|AC090830.11| Homo sapiens chromosome 15, clone CTD-2171B22, c... 40 9.4
47emb|CT485675.4| RP43-034D18, complete sequence 40 9.4
48emb|Z68003.1|CEE02H4 Caenorhabditis elegans Cosmid E02H4, comple... 40 9.4
49emb|AL844546.8| Mouse DNA sequence from clone RP23-243I3 on chro... 40 9.4
50emb|AL928560.6| Mouse DNA sequence from clone RP23-353N23 on chr... 40 9.4
51gb|AC118274.9| Homo sapiens chromosome 15, clone RP11-265M18, co... 40 9.4
52gb|AC079375.24| Homo sapiens X BAC RP11-757E1 (Roswell Park Canc... 40 9.4 
>ref|XM_550136.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2134

 Score =  335 bits (169), Expect = 1e-88
 Identities = 271/306 (88%)
 Strand = Plus / Minus

                                                                        
Query: 378  ttacaagtacttgaccatcccacggccttcnacactaagctttgaagcctgaaggttttt 437
            |||||||||||||| ||| ||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct: 1699 ttacaagtacttgatcattccacgcccttcaacactgagttttgacgcctgaaggttttt 1640

                                                                        
Query: 438  cttctttggcgctttcagctgctgcagtttcttgttcatcttcagccgacgctggtcttg 497
            ||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||||||||
Sbjct: 1639 cttctttggtgctttcagctgctgcaatttcttgttcatctttagccggcgctggtcttg 1580

                                                                        
Query: 498  aacttgntgcttagcacgagcccgtatctggtcgggatcaattttggaatgtggacgaat 557
             ||    ||||||||||||||||  || || ||||||||||||||||| || || |||||
Sbjct: 1579 gacaacctgcttagcacgagccctaatttgttcgggatcaattttggactgcgggcgaat 1520

                                                                        
Query: 558  gacaaagtccagangtgatgcttctggcctagaagcatgctgcctagaaccactttgccc 617
             ||||||||||   ||||||||||||||||||||||||||||||| | ||||| ||||||
Sbjct: 1519 aacaaagtccaagggtgatgcttctggcctagaagcatgctgccttgcaccaccttgccc 1460

                                                                        
Query: 618  ggacttgcgctgagagaagtcagcatcaagatcatcgtctcggggttccattccagacct 677
             |||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||
Sbjct: 1459 agacttgcgctgagagaagtcagcatcaagatcatcgtccctggattccattccagaact 1400

                  
Query: 678  acttga 683
            ||||||
Sbjct: 1399 acttga 1394
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>gb|BT017853.1| Zea mays clone EL01N0511C02.c mRNA sequence
          Length = 882

 Score =  335 bits (169), Expect = 1e-88
 Identities = 268/302 (88%)
 Strand = Plus / Minus

                                                                       
Query: 379 tacaagtacttgaccatcccacggccttcnacactaagctttgaagcctgaaggtttttc 438
           |||| |||||||| ||| ||||||||||| || || ||||| || |||||||||||||||
Sbjct: 553 tacaggtacttgatcatgccacggccttccacgctgagcttcgacgcctgaaggtttttc 494

                                                                       
Query: 439 ttctttggcgctttcagctgctgcagtttcttgttcatcttcagccgacgctggtcttga 498
           ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| 
Sbjct: 493 ttcttgggcgctttcagctgctgcaatttcttgttcatcttcagccgacgctggtcttgg 434

                                                                       
Query: 499 acttgntgcttagcacgagcccgtatctggtcgggatcaattttggaatgtggacgaatg 558
           ||    ||||||||||||||||||||||| || || ||||||||||| ||||||||||||
Sbjct: 433 acagcctgcttagcacgagcccgtatctgctcagggtcaattttggactgtggacgaatg 374

                                                                       
Query: 559 acaaagtccagangtgatgcttctggcctagaagcatgctgcctagaaccactttgcccg 618
           |||||||||| | | || ||||| |||||||||||||||||||| |||| ||||||||| 
Sbjct: 373 acaaagtccaaaggcgaggcttccggcctagaagcatgctgccttgaactactttgccca 314

                                                                       
Query: 619 gacttgcgctgagagaagtcagcatcaagatcatcgtctcggggttccattccagaccta 678
           |||||||| || || |||||||||||||||||||| |||| || |||||||||||| |||
Sbjct: 313 gacttgcgttgtgaaaagtcagcatcaagatcatcatctctggattccattccagagcta 254

             
Query: 679 ct 680
           ||
Sbjct: 253 ct 252
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>dbj|AK121921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106E16, full
            insert sequence
          Length = 2134

 Score =  335 bits (169), Expect = 1e-88
 Identities = 271/306 (88%)
 Strand = Plus / Minus

                                                                        
Query: 378  ttacaagtacttgaccatcccacggccttcnacactaagctttgaagcctgaaggttttt 437
            |||||||||||||| ||| ||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct: 1699 ttacaagtacttgatcattccacgcccttcaacactgagttttgacgcctgaaggttttt 1640

                                                                        
Query: 438  cttctttggcgctttcagctgctgcagtttcttgttcatcttcagccgacgctggtcttg 497
            ||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||||||||
Sbjct: 1639 cttctttggtgctttcagctgctgcaatttcttgttcatctttagccggcgctggtcttg 1580

                                                                        
Query: 498  aacttgntgcttagcacgagcccgtatctggtcgggatcaattttggaatgtggacgaat 557
             ||    ||||||||||||||||  || || ||||||||||||||||| || || |||||
Sbjct: 1579 gacaacctgcttagcacgagccctaatttgttcgggatcaattttggactgcgggcgaat 1520

                                                                        
Query: 558  gacaaagtccagangtgatgcttctggcctagaagcatgctgcctagaaccactttgccc 617
             ||||||||||   ||||||||||||||||||||||||||||||| | ||||| ||||||
Sbjct: 1519 aacaaagtccaagggtgatgcttctggcctagaagcatgctgccttgcaccaccttgccc 1460

                                                                        
Query: 618  ggacttgcgctgagagaagtcagcatcaagatcatcgtctcggggttccattccagacct 677
             |||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||
Sbjct: 1459 agacttgcgctgagagaagtcagcatcaagatcatcgtccctggattccattccagaact 1400

                  
Query: 678  acttga 683
            ||||||
Sbjct: 1399 acttga 1394
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>gb|AY104326.1| Zea mays PCO064465 mRNA sequence
          Length = 879

 Score =  313 bits (158), Expect = 4e-82
 Identities = 267/303 (88%), Gaps = 1/303 (0%)
 Strand = Plus / Minus

                                                                       
Query: 379 tacaagtacttgaccatcccacggccttcnacactaagctttgaagcctgaaggtttttc 438
           |||| |||||||| ||| ||||||||||| || || ||||| || |||||||||||||||
Sbjct: 562 tacaggtacttgatcatgccacggccttccacgctgagcttcgacgcctgaaggtttttc 503

                                                                       
Query: 439 ttctttggcgctttcagctgctgcagtttcttgttcatcttcagccgacgctggtcttga 498
           ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| 
Sbjct: 502 ttcttgggcgctttcagctgctgcaatttcttgttcatcttcagccgacgctggtcttgg 443

                                                                       
Query: 499 acttgntgcttagcacgagcccgtatctggtcgggatcaattttggaatgtggacgaatg 558
           ||    ||||||||||||||||||||||| || || ||||||||||| ||||||||||||
Sbjct: 442 acagcctgcttagcacgagcccgtatctgctcagggtcaattttggactgtggacgaatg 383

                                                                       
Query: 559 acaaagtccagangtgatgcttctggcctagaagcatgctg-cctagaaccactttgccc 617
           |||||||||| | | || ||||| ||||||||||| ||||| ||| |||| |||||||||
Sbjct: 382 acaaagtccaaaggcgaggcttccggcctagaagcgtgctgcccttgaactactttgccc 323

                                                                       
Query: 618 ggacttgcgctgagagaagtcagcatcaagatcatcgtctcggggttccattccagacct 677
            |||||||| || || |||||||||||||||||||| |||| || |||||||||||| ||
Sbjct: 322 agacttgcgttgtgaaaagtcagcatcaagatcatcatctctggattccattccagagct 263

              
Query: 678 act 680
           |||
Sbjct: 262 act 260
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  131 bits (66), Expect = 3e-27
 Identities = 92/101 (91%)
 Strand = Plus / Minus

                                                                           
Query: 378     ttacaagtacttgaccatcccacggccttcnacactaagctttgaagcctgaaggttttt 437
               |||||||||||||| ||| ||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct: 2563886 ttacaagtacttgatcattccacgcccttcaacactgagttttgacgcctgaaggttttt 2563827

                                                        
Query: 438     cttctttggcgctttcagctgctgcagtttcttgttcatct 478
               ||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 2563826 cttctttggtgctttcagctgctgcaatttcttgttcatct 2563786



 Score =  129 bits (65), Expect = 1e-26
 Identities = 126/147 (85%)
 Strand = Plus / Minus

                                                                           
Query: 481     agccgacgctggtcttgaacttgntgcttagcacgagcccgtatctggtcgggatcaatt 540
               ||||| ||||||||||| ||    ||||||||||||||||  || || ||||||||||||
Sbjct: 2563673 agccggcgctggtcttggacaacctgcttagcacgagccctaatttgttcgggatcaatt 2563614

                                                                           
Query: 541     ttggaatgtggacgaatgacaaagtccagangtgatgcttctggcctagaagcatgctgc 600
               ||||| || || ||||| ||||||||||   |||||||||||||||||||||||||||||
Sbjct: 2563613 ttggactgcgggcgaataacaaagtccaagggtgatgcttctggcctagaagcatgctgc 2563554

                                          
Query: 601     ctagaaccactttgcccggacttgcgc 627
               || | ||||| |||||| |||||||||
Sbjct: 2563553 cttgcaccaccttgcccagacttgcgc 2563527



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                        
Query: 627     ctgagagaagtcagcatcaagatcatcgtctcggggttccattccagacctacttga 683
               |||||||||||||||||||||||||||||| | || |||||||||||| ||||||||
Sbjct: 2563440 ctgagagaagtcagcatcaagatcatcgtccctggattccattccagaactacttga 2563384
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>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0416D03
          Length = 157112

 Score =  131 bits (66), Expect = 3e-27
 Identities = 92/101 (91%)
 Strand = Plus / Minus

                                                                          
Query: 378    ttacaagtacttgaccatcccacggccttcnacactaagctttgaagcctgaaggttttt 437
              |||||||||||||| ||| ||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct: 118307 ttacaagtacttgatcattccacgcccttcaacactgagttttgacgcctgaaggttttt 118248

                                                       
Query: 438    cttctttggcgctttcagctgctgcagtttcttgttcatct 478
              ||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 118247 cttctttggtgctttcagctgctgcaatttcttgttcatct 118207



 Score =  129 bits (65), Expect = 1e-26
 Identities = 126/147 (85%)
 Strand = Plus / Minus

                                                                          
Query: 481    agccgacgctggtcttgaacttgntgcttagcacgagcccgtatctggtcgggatcaatt 540
              ||||| ||||||||||| ||    ||||||||||||||||  || || ||||||||||||
Sbjct: 118094 agccggcgctggtcttggacaacctgcttagcacgagccctaatttgttcgggatcaatt 118035

                                                                          
Query: 541    ttggaatgtggacgaatgacaaagtccagangtgatgcttctggcctagaagcatgctgc 600
              ||||| || || ||||| ||||||||||   |||||||||||||||||||||||||||||
Sbjct: 118034 ttggactgcgggcgaataacaaagtccaagggtgatgcttctggcctagaagcatgctgc 117975

                                         
Query: 601    ctagaaccactttgcccggacttgcgc 627
              || | ||||| |||||| |||||||||
Sbjct: 117974 cttgcaccaccttgcccagacttgcgc 117948



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                       
Query: 627    ctgagagaagtcagcatcaagatcatcgtctcggggttccattccagacctacttga 683
              |||||||||||||||||||||||||||||| | || |||||||||||| ||||||||
Sbjct: 117861 ctgagagaagtcagcatcaagatcatcgtccctggattccattccagaactacttga 117805
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>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0434B04
          Length = 167029

 Score =  131 bits (66), Expect = 3e-27
 Identities = 92/101 (91%)
 Strand = Plus / Minus

                                                                         
Query: 378   ttacaagtacttgaccatcccacggccttcnacactaagctttgaagcctgaaggttttt 437
             |||||||||||||| ||| ||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct: 13661 ttacaagtacttgatcattccacgcccttcaacactgagttttgacgcctgaaggttttt 13602

                                                      
Query: 438   cttctttggcgctttcagctgctgcagtttcttgttcatct 478
             ||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 13601 cttctttggtgctttcagctgctgcaatttcttgttcatct 13561



 Score =  129 bits (65), Expect = 1e-26
 Identities = 126/147 (85%)
 Strand = Plus / Minus

                                                                         
Query: 481   agccgacgctggtcttgaacttgntgcttagcacgagcccgtatctggtcgggatcaatt 540
             ||||| ||||||||||| ||    ||||||||||||||||  || || ||||||||||||
Sbjct: 13448 agccggcgctggtcttggacaacctgcttagcacgagccctaatttgttcgggatcaatt 13389

                                                                         
Query: 541   ttggaatgtggacgaatgacaaagtccagangtgatgcttctggcctagaagcatgctgc 600
             ||||| || || ||||| ||||||||||   |||||||||||||||||||||||||||||
Sbjct: 13388 ttggactgcgggcgaataacaaagtccaagggtgatgcttctggcctagaagcatgctgc 13329

                                        
Query: 601   ctagaaccactttgcccggacttgcgc 627
             || | ||||| |||||| |||||||||
Sbjct: 13328 cttgcaccaccttgcccagacttgcgc 13302



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                      
Query: 627   ctgagagaagtcagcatcaagatcatcgtctcggggttccattccagacctacttga 683
             |||||||||||||||||||||||||||||| | || |||||||||||| ||||||||
Sbjct: 13215 ctgagagaagtcagcatcaagatcatcgtccctggattccattccagaactacttga 13159
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>ref|NM_102946.3| Arabidopsis thaliana unknown protein AT1G32130 mRNA, complete cds
          Length = 1853

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 436  ttcttctttggcgctttcagctgctgcagtttcttgttcatcttcagccgacgctggtc 494
            ||||||||||   |||| |||||||| ||||||||||||||||| | ||||||||||||
Sbjct: 1530 ttcttctttgttccttttagctgctgaagtttcttgttcatcttgacccgacgctggtc 1472
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>gb|AC084165.1|AC084165 Arabidopsis thaliana chromosome 1 BAC F3C3 genomic sequence, complete
             sequence
          Length = 90132

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 436   ttcttctttggcgctttcagctgctgcagtttcttgttcatct 478
             ||||||||||   |||| |||||||| ||||||||||||||||
Sbjct: 66955 ttcttctttgttccttttagctgctgaagtttcttgttcatct 66913
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>ref|XM_483143.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2616

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 285  tggccatggtggaagagtgctt 306
            ||||||||||||||||||||||
Sbjct: 1304 tggccatggtggaagagtgctt 1325
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>ref|XM_483144.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2500

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 285  tggccatggtggaagagtgctt 306
            ||||||||||||||||||||||
Sbjct: 1311 tggccatggtggaagagtgctt 1332
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>gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8
          Length = 278911

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 276    gccctccgatggccatggtgga 297
              ||||||||||||||||||||||
Sbjct: 246813 gccctccgatggccatggtgga 246792
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>gb|AC009041.10| Homo sapiens chromosome 16 clone RP11-161M6, complete sequence
          Length = 162342

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 276    gccctccgatggccatggtgga 297
              ||||||||||||||||||||||
Sbjct: 101782 gccctccgatggccatggtgga 101761
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 285      tggccatggtggaagagtgctt 306
                ||||||||||||||||||||||
Sbjct: 24470438 tggccatggtggaagagtgctt 24470459
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>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1142B04
          Length = 161964

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 285   tggccatggtggaagagtgctt 306
             ||||||||||||||||||||||
Sbjct: 86154 tggccatggtggaagagtgctt 86175
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>dbj|AK067229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096C15, full
            insert sequence
          Length = 2616

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 285  tggccatggtggaagagtgctt 306
            ||||||||||||||||||||||
Sbjct: 1304 tggccatggtggaagagtgctt 1325
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>dbj|AK067381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102C10, full
            insert sequence
          Length = 2499

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 285  tggccatggtggaagagtgctt 306
            ||||||||||||||||||||||
Sbjct: 1310 tggccatggtggaagagtgctt 1331
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>gb|AF251068.2| Oryza sativa (japonica cultivar-group) alkaline alpha-galactosidase
            mRNA, complete cds
          Length = 2694

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 285  tggccatggtggaagagtgctt 306
            ||||||||||||||||||||||
Sbjct: 1385 tggccatggtggaagagtgctt 1406
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>emb|AL024496.7|HS422E10 Human DNA sequence from clone LA16-422E10 on chromosome 16 Contains an
             EST and five putative CpG islands, complete sequence
          Length = 27210

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 276   gccctccgatggccatggtgga 297
             ||||||||||||||||||||||
Sbjct: 22294 gccctccgatggccatggtgga 22273
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>gb|AC163617.5| Mus musculus BAC clone RP23-115O21 from chromosome 8, complete sequence
          Length = 224322

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 415   agctttgaagcctgaaggttt 435
             |||||||||||||||||||||
Sbjct: 52557 agctttgaagcctgaaggttt 52537
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 511     gcacgagcccgtatctggtcg 531
               |||||||||||||||||||||
Sbjct: 1717205 gcacgagcccgtatctggtcg 1717185
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>gb|AC150391.2| Branchiostoma floridae clone CH302-119J21, complete sequence
          Length = 157607

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 100    aacatgacaaacatttgtaca 120
              |||||||||||||||||||||
Sbjct: 113230 aacatgacaaacatttgtaca 113250
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>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0094K23, complete sequence
          Length = 167482

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 60    tcaaacttaaaacttacagcccaat 84
             ||||||||||||||| |||||||||
Sbjct: 91562 tcaaacttaaaactttcagcccaat 91586
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>gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequence
          Length = 183894

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 231    gctaatctacattagccaaga 251
              |||||||||||||||||||||
Sbjct: 165919 gctaatctacattagccaaga 165899
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>gb|AC155810.5| Mus musculus BAC clone RP24-181I18 from chromosome 8, complete sequence
          Length = 168291

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 415   agctttgaagcctgaaggttt 435
             |||||||||||||||||||||
Sbjct: 30692 agctttgaagcctgaaggttt 30712
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>emb|BX088524.16| Zebrafish DNA sequence from clone CH211-215A9 in linkage group 10,
              complete sequence
          Length = 228624

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 99     aaacatgacaaacatttgtacagtaaaag 127
              |||||||||||||||||| ||| ||||||
Sbjct: 104351 aaacatgacaaacatttgcacattaaaag 104323
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 60       tcaaacttaaaacttacagcccaat 84
                ||||||||||||||| |||||||||
Sbjct: 19496155 tcaaacttaaaactttcagcccaat 19496179
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>emb|CR627488.8| Zebrafish DNA sequence from clone CH211-242B23 in linkage group 10,
              complete sequence
          Length = 137433

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 99     aaacatgacaaacatttgtacagtaaaag 127
              |||||||||||||||||| ||| ||||||
Sbjct: 132560 aaacatgacaaacatttgcacattaaaag 132532
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>ref|XM_457530.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B13541g)
           partial mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 450 tttcagctgctgcagtttcttgtt 473
           |||||||||||||||||| |||||
Sbjct: 616 tttcagctgctgcagtttgttgtt 593
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>ref|NM_003922.2| Homo sapiens hect (homologous to the E6-AP (UBE3A) carboxyl terminus)
             domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA
          Length = 15156

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 624   gcgctgagagaagtcagcat 643
             ||||||||||||||||||||
Sbjct: 13250 gcgctgagagaagtcagcat 13269
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>ref|XM_706922.1| Candida albicans SC5314 hypothetical protein (CaO19.8264), mRNA
          Length = 2913

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 461  gcagtttcttgttcatcttc 480
            ||||||||||||||||||||
Sbjct: 2900 gcagtttcttgttcatcttc 2881
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>ref|XM_706901.1| Candida albicans SC5314 hypothetical protein (CaO19.649), mRNA
          Length = 2913

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 461  gcagtttcttgttcatcttc 480
            ||||||||||||||||||||
Sbjct: 2900 gcagtttcttgttcatcttc 2881
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>gb|AC112671.25| Mus musculus chromosome 13, clone RP24-299O19, complete sequence
          Length = 139581

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   aatctacattagccaagaaa 253
             ||||||||||||||||||||
Sbjct: 27228 aatctacattagccaagaaa 27247
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>ref|XM_745837.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g10420) partial
            mRNA
          Length = 2181

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    ttcgattcaattgcatcagg 24
            ||||||||||||||||||||
Sbjct: 1250 ttcgattcaattgcatcagg 1231
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>gb|AC124362.3| Mus musculus BAC clone RP24-528N1 from chromosome 13, complete sequence
          Length = 173382

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    aatctacattagccaagaaa 253
              ||||||||||||||||||||
Sbjct: 112271 aatctacattagccaagaaa 112290
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>gb|AC073236.8| Homo sapiens BAC clone RP11-774B15 from 7, complete sequence
          Length = 171012

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     caaacatgacaaacatttgt 117
              ||||||||||||||||||||
Sbjct: 160372 caaacatgacaaacatttgt 160353
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>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
               hansenii
          Length = 1349926

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 450     tttcagctgctgcagtttcttgtt 473
               |||||||||||||||||| |||||
Sbjct: 1054027 tttcagctgctgcagtttgttgtt 1054050
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>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL
             Y-1140 of Kluyveromyces lactis
          Length = 2234072

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    caaacatgacaaacatttgt 117
             ||||||||||||||||||||
Sbjct: 10607 caaacatgacaaacatttgt 10588
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>gb|BC040929.1| Homo sapiens hect (homologous to the E6-AP (UBE3A) carboxyl
           terminus) domain and RCC1 (CHC1)-like domain (RLD) 1,
           mRNA (cDNA clone IMAGE:4472317), partial cds
          Length = 2431

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 624 gcgctgagagaagtcagcat 643
           ||||||||||||||||||||
Sbjct: 534 gcgctgagagaagtcagcat 553
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>gb|AC022239.16| Homo sapiens chromosome 8, clone RP11-148O21, complete sequence
          Length = 191630

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    ccaagaaattccatttccac 265
              ||||||||||||||||||||
Sbjct: 117962 ccaagaaattccatttccac 117943
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>gb|AC122110.4| Mus Musculus Strain C57BL6/J Chromosome 2 BAC, RP23-319K8, Complete
             Sequence, complete sequence
          Length = 179550

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    gtcaaacttaaaacttacag 78
             ||||||||||||||||||||
Sbjct: 30963 gtcaaacttaaaacttacag 30944
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>gb|U50078.1|HSU50078 Human guanine nucleotide exchange factor p532 mRNA, complete cds
          Length = 15164

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 624   gcgctgagagaagtcagcat 643
             ||||||||||||||||||||
Sbjct: 13258 gcgctgagagaagtcagcat 13277
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>gb|AY275833.1| Homo sapiens polymerase (DNA directed), alpha (POLA) gene, complete cds
          Length = 304837

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 482    gccgacgctggtcttgaact 501
              ||||||||||||||||||||
Sbjct: 191488 gccgacgctggtcttgaact 191507
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>gb|AC154706.2| Mus musculus BAC clone RP23-132D23 from chromosome 14, complete sequence
          Length = 215330

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     gtcaaacttaaaacttacag 78
              ||||||||||||||||||||
Sbjct: 210140 gtcaaacttaaaacttacag 210121
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>gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, complete sequence
          Length = 233877

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   ttgtacagtaaaaggcacca 133
             ||||||||||||||||||||
Sbjct: 91014 ttgtacagtaaaaggcacca 91033
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>gb|AC090830.11| Homo sapiens chromosome 15, clone CTD-2171B22, complete sequence
          Length = 84896

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 624  gcgctgagagaagtcagcat 643
            ||||||||||||||||||||
Sbjct: 7628 gcgctgagagaagtcagcat 7647
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>emb|CT485675.4| RP43-034D18, complete sequence
          Length = 163081

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 482   gccgacgctggtcttgaact 501
             ||||||||||||||||||||
Sbjct: 17261 gccgacgctggtcttgaact 17242
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>emb|Z68003.1|CEE02H4 Caenorhabditis elegans Cosmid E02H4, complete sequence
          Length = 35409

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    tcaaacatgacaaacatttgtaca 120
             ||||| ||||||||||||||||||
Sbjct: 23663 tcaaagatgacaaacatttgtaca 23686
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>emb|AL844546.8| Mouse DNA sequence from clone RP23-243I3 on chromosome 2, complete
              sequence
          Length = 170475

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 478    ttcagccgacgctggtcttgaact 501
              ||||||||| ||||||||||||||
Sbjct: 153945 ttcagccgaggctggtcttgaact 153922
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>emb|AL928560.6| Mouse DNA sequence from clone RP23-353N23 on chromosome 2, complete
              sequence
          Length = 209502

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    cccaaatcaccaagttttcg 204
              ||||||||||||||||||||
Sbjct: 128460 cccaaatcaccaagttttcg 128479
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>gb|AC118274.9| Homo sapiens chromosome 15, clone RP11-265M18, complete sequence
          Length = 177432

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 624    gcgctgagagaagtcagcat 643
              ||||||||||||||||||||
Sbjct: 138611 gcgctgagagaagtcagcat 138592
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>gb|AC079375.24| Homo sapiens X BAC RP11-757E1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 172649

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 482   gccgacgctggtcttgaact 501
             ||||||||||||||||||||
Sbjct: 17465 gccgacgctggtcttgaact 17446


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,987,305
Number of Sequences: 3902068
Number of extensions: 5987305
Number of successful extensions: 308963
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 308589
Number of HSP's gapped (non-prelim): 369
length of query: 685
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 662
effective length of database: 17,143,297,704
effective search space: 11348863080048
effective search space used: 11348863080048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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