Clone Name | rbasd14k08 |
---|---|
Clone Library Name | barley_pub |
>PLAS_HORVU (P08248) Plastocyanin, chloroplast precursor| Length = 155 Score = 182 bits (461), Expect(2) = 1e-46 Identities = 87/88 (98%), Positives = 87/88 (98%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS 266 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYL APGETFS Sbjct: 68 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLTAPGETFS 127 Query: 265 VTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 VTLTVPGTYGFYCEPHAGAGMVGKVTVN Sbjct: 128 VTLTVPGTYGFYCEPHAGAGMVGKVTVN 155 Score = 24.3 bits (51), Expect(2) = 1e-46 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = -3 Query: 473 QDVLLGANGG 444 QDVLLGANGG Sbjct: 59 QDVLLGANGG 68
>PLAS_ORYSA (P20423) Plastocyanin, chloroplast precursor| Length = 154 Score = 180 bits (457), Expect(2) = 8e-46 Identities = 85/88 (96%), Positives = 88/88 (100%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS 266 GVLVFEPNDF+VK+GETITFKNNAG+PHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS Sbjct: 67 GVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS 126 Query: 265 VTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 VTLTVPGTYGFYCEPHAGAGMVGKVTVN Sbjct: 127 VTLTVPGTYGFYCEPHAGAGMVGKVTVN 154 Score = 22.7 bits (47), Expect(2) = 8e-46 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = -3 Query: 473 QDVLLGANGG 444 Q+VLLGANGG Sbjct: 58 QEVLLGANGG 67
>PLAS1_TOBAC (P35476) Plastocyanin A'/A''| Length = 99 Score = 140 bits (354), Expect = 2e-33 Identities = 68/90 (75%), Positives = 75/90 (83%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEEYLNAPGET 272 G L F P +FSV AGE ITFKNNAG+PHNVVFDED +P+GVDVSKI S+EEYLN PGET Sbjct: 10 GGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDVSKISMSEEEYLNGPGET 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 +SVTL+ GTY FYC PH GAGMVGKVTVN Sbjct: 70 YSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99
>PLAS_MERPE (P00295) Plastocyanin| Length = 99 Score = 138 bits (347), Expect = 1e-32 Identities = 66/90 (73%), Positives = 74/90 (82%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEE--YLNAPGET 272 G L F PN+FSV +GE ITFKNNAG+PHNVVFDED +PSGVD SKIS +E LNAPGET Sbjct: 10 GELAFVPNNFSVPSGEKITFKNNAGFPHNVVFDEDEIPSGVDASKISMDEADLLNAPGET 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 ++VTLT G+Y FYC PH GAGMVGKVTVN Sbjct: 70 YAVTLTEKGSYSFYCSPHQGAGMVGKVTVN 99
>PLAS_LACSA (P00290) Plastocyanin| Length = 99 Score = 138 bits (347), Expect = 1e-32 Identities = 66/90 (73%), Positives = 75/90 (83%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEEYLNAPGET 272 G LVFEP+ FSV +GE I FKNNAG+PHNVVFDED +P+GVD SKI S+E+ LNAPGET Sbjct: 10 GGLVFEPSTFSVASGEKIVFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAPGET 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 ++VTLT GTY FYC PH GAGMVGKVTVN Sbjct: 70 YAVTLTEKGTYSFYCAPHQGAGMVGKVTVN 99
>PLAS_DAUCA (P20422) Plastocyanin| Length = 97 Score = 138 bits (347), Expect = 1e-32 Identities = 64/87 (73%), Positives = 74/87 (85%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS 266 G LVF P+ FSV GE I+FKNNAG+PHN+VFDED VP+GVDVSKISQE+YL+ GE+F+ Sbjct: 10 GALVFSPSSFSVAKGEGISFKNNAGFPHNIVFDEDEVPAGVDVSKISQEDYLDGAGESFT 69 Query: 265 VTLTVPGTYGFYCEPHAGAGMVGKVTV 185 VTLT GTY FYCEPHAGAGM G+VTV Sbjct: 70 VTLTEKGTYKFYCEPHAGAGMKGEVTV 96
>PLAS_PETCR (P17341) Plastocyanins A and B| Length = 97 Score = 137 bits (346), Expect = 1e-32 Identities = 64/88 (72%), Positives = 72/88 (81%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS 266 G LVF P+ F+V AGE ITFKNNAG+PHN+VFDED VP+GV+ KISQ EYLN GET+ Sbjct: 10 GGLVFSPSSFTVAAGEKITFKNNAGFPHNIVFDEDEVPAGVNAEKISQPEYLNGAGETYE 69 Query: 265 VTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 VTLT GTY FYCEPHAGAGM G+VTVN Sbjct: 70 VTLTEKGTYKFYCEPHAGAGMKGEVTVN 97
>PLAS_SOLCR (P00297) Plastocyanin| Length = 99 Score = 137 bits (345), Expect = 2e-32 Identities = 65/90 (72%), Positives = 74/90 (82%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEEYLNAPGET 272 G L F P +FS+ AGE ITFKNNAG+PHNVVFDED +P+GVD SKIS +E+ LNAPGET Sbjct: 10 GGLAFVPGNFSISAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGET 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 +SVTL+ GTY FYC PH GAGMVGKVTVN Sbjct: 70 YSVTLSEKGTYSFYCSPHQGAGMVGKVTVN 99
>PLAS_SILPR (P07030) Plastocyanin, chloroplast precursor| Length = 165 Score = 136 bits (343), Expect = 3e-32 Identities = 66/90 (73%), Positives = 75/90 (83%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEEYLNAPGET 272 G L F P+D S+ +GE ITFKNNAG+PHNVVFDED VP+GVDV+KIS +E+ LNAPGE Sbjct: 76 GGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVDVTKISMPEEDLLNAPGEE 135 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 +SVTLT GTY FYC PHAGAGMVGKVTVN Sbjct: 136 YSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165
>PLAS_SAMNI (P00291) Plastocyanin| Length = 99 Score = 135 bits (341), Expect = 5e-32 Identities = 66/90 (73%), Positives = 75/90 (83%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEEYLNAPGET 272 G L F P++FSV +GE ITFKNNAG+PHNVVFDED VPSGVD +KI S+++ LNAPGET Sbjct: 10 GSLAFIPSNFSVPSGEKITFKNNAGFPHNVVFDEDEVPSGVDSAKISMSEDDLLNAPGET 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 +SVTLT GTY FYC PH GAGMVGKVTVN Sbjct: 70 YSVTLTESGTYKFYCSPHQGAGMVGKVTVN 99
>PLAS2_ARATH (P42699) Plastocyanin major isoform, chloroplast precursor| (DNA-damage-repair/toleration protein DRT112) Length = 167 Score = 135 bits (341), Expect = 5e-32 Identities = 65/90 (72%), Positives = 70/90 (77%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEE--YLNAPGET 272 G L F PNDFS+ GE I FKNNAGYPHNVVFDED +PSGVDV+KIS +E LN GET Sbjct: 78 GSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDVAKISMDEQDLLNGAGET 137 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 + V LT PGTY FYC PH GAGMVGKVTVN Sbjct: 138 YEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167
>PLAS_SPIOL (P00289) Plastocyanin, chloroplast precursor| Length = 168 Score = 135 bits (340), Expect = 7e-32 Identities = 65/90 (72%), Positives = 72/90 (80%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEEYLNAPGET 272 G L F P DFSV +GE I FKNNAG+PHNVVFDED +PSGVD +KI S+E+ LNAPGET Sbjct: 79 GSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMSEEDLLNAPGET 138 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 + VTLT GTY FYC PH GAGMVGKVTVN Sbjct: 139 YKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168
>PLAS2_TOBAC (P35477) Plastocyanin B'/B''| Length = 99 Score = 135 bits (339), Expect = 9e-32 Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEEYLNAPGET 272 G L F P +FSV AGE ITFKNNAG+PHNVVFDED +P+GVD SKI S+E+ LN PGET Sbjct: 10 GGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNGPGET 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 +SVTL+ GTY FYC PH GAGMVGKVTVN Sbjct: 70 YSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99
>PLAS_CUCPE (P00292) Plastocyanin| Length = 99 Score = 134 bits (336), Expect = 2e-31 Identities = 64/90 (71%), Positives = 70/90 (77%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEEYLNAPGET 272 G L F PNDFSV AGE I FKNNAG+PHNVVFDED +PSGVD KIS +E+ LNAPGE Sbjct: 10 GSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMNEEDLLNAPGEV 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 + V LT G+Y FYC PH GAGMVGKVTVN Sbjct: 70 YKVNLTEKGSYSFYCSPHQGAGMVGKVTVN 99
>PLAS_SOLTU (P00296) Plastocyanin| Length = 99 Score = 133 bits (335), Expect = 3e-31 Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEEYLNAPGET 272 G L F P +FSV AGE ITFKNNAG+PHNVVFDED +P+GVD SKIS +E+ LNA GET Sbjct: 10 GSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMAEEDLLNAAGET 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 +SVTL+ GTY FYC PH GAGMVGKVTVN Sbjct: 70 YSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99
>PLAS_PHAVU (P00287) Plastocyanin| Length = 99 Score = 133 bits (335), Expect = 3e-31 Identities = 64/90 (71%), Positives = 72/90 (80%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEEYLNAPGET 272 G LVF P++FSV +GE I FKNNAG+PHNVVFDED +P+GVD KIS +EE LNAPGET Sbjct: 10 GSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGET 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 + VTL GTY FYC PH GAGMVGKVTVN Sbjct: 70 YVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 99
>PLAS_LYCES (P17340) Plastocyanin, chloroplast precursor| Length = 170 Score = 133 bits (335), Expect = 3e-31 Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEEYLNAPGET 272 G L F P +FSV AGE ITFKNNAG+PHNVVFDED +P+GVD SKI S+E+ LNA GET Sbjct: 81 GSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAAGET 140 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 +SVTL+ GTY FYC PH GAGMVGKVTVN Sbjct: 141 YSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170
>PLAS_VICFA (P00288) Plastocyanin| Length = 99 Score = 132 bits (333), Expect = 4e-31 Identities = 63/90 (70%), Positives = 71/90 (78%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEEYLNAPGET 272 G L F PN F V AG+TI FKNNAG+PHNVVFDED +PSGVD +KIS +E+ LNAPGET Sbjct: 10 GGLAFVPNSFEVSAGDTIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMPEEDLLNAPGET 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 +SV L GTY FYC PH GAGMVG+VTVN Sbjct: 70 YSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 99
>PLAS_CAPBU (P00294) Plastocyanin| Length = 99 Score = 132 bits (333), Expect = 4e-31 Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEE--YLNAPGET 272 G L F PNDFS+ GE I FKNNAG+PHNVVFDED +PSGVD SKIS +E LNA GET Sbjct: 10 GSLAFVPNDFSIAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDENDLLNAAGET 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 + V LT GTY FYC PH GAGMVGKVTVN Sbjct: 70 YEVALTEAGTYSFYCAPHQGAGMVGKVTVN 99
>PLAS_RUMOB (P00298) Plastocyanin| Length = 99 Score = 131 bits (330), Expect = 1e-30 Identities = 62/89 (69%), Positives = 71/89 (79%), Gaps = 2/89 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEEYLNAPGET 272 G L F P F+V AGE I FKNNAG+PHN+VFDED VP+GVD SKI S+E+ LNAPGET Sbjct: 10 GALAFVPGSFTVAAGEKIVFKNNAGFPHNIVFDEDEVPAGVDASKISMSEEDLLNAPGET 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 ++VTL+ GTY FYC PH GAGMVGKVTV Sbjct: 70 YAVTLSEKGTYSFYCSPHQGAGMVGKVTV 98
>PLAS_CHLRE (P18068) Plastocyanin, chloroplast precursor (PC6-2)| Length = 145 Score = 131 bits (329), Expect = 1e-30 Identities = 56/88 (63%), Positives = 71/88 (80%) Frame = -1 Query: 448 AGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETF 269 +G L F P ++K+GET+ F NNAG+PHN+VFDEDA+PSGV+ IS+++YLNAPGET+ Sbjct: 57 SGALEFVPKTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETY 116 Query: 268 SVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 SV LT G YG+YCEPH GAGMVGK+ V Sbjct: 117 SVKLTAAGEYGYYCEPHQGAGMVGKIIV 144
>PLAS_PEA (P16002) Plastocyanin, chloroplast precursor| Length = 168 Score = 129 bits (325), Expect = 4e-30 Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEEYLNAPGET 272 G L F P+ V AGETI FKNNAG+PHNVVFDED +P+GVD SKIS +E+ LNAPGET Sbjct: 79 GGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGET 138 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 +SV L GTY FYC PH GAGMVG+VTVN Sbjct: 139 YSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168
>PLAS_CUCSA (P00293) Plastocyanin| Length = 99 Score = 129 bits (324), Expect = 5e-30 Identities = 60/90 (66%), Positives = 71/90 (78%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEEYLNAPGET 272 G L F PN+F+V +GE ITFKNNAG+PHNVVFDED +PSGVD KIS +E+ L+APG+ Sbjct: 10 GSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDSGKISMNEEDLLBAPGZV 69 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 + V LT G+Y FYC PH GAGMVGKVTVN Sbjct: 70 YZVZLTZKGSYSFYCSPHQGAGMVGKVTVN 99
>PLAS2_POPNI (P11970) Plastocyanin B, chloroplast precursor| Length = 168 Score = 129 bits (324), Expect = 5e-30 Identities = 64/90 (71%), Positives = 71/90 (78%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEEYLNAPGET 272 G L F P++FSV AGE I FKNNAG+PHNV+FDEDAVPSGVDVSKI S+E+ LNA GET Sbjct: 79 GSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEEDLLNAKGET 138 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 F V L+ G Y FYC PH GAGMVGKV VN Sbjct: 139 FEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168
>PLAS1_ARATH (P11490) Plastocyanin minor isoform, chloroplast precursor| Length = 171 Score = 129 bits (324), Expect = 5e-30 Identities = 61/89 (68%), Positives = 70/89 (78%), Gaps = 2/89 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEE--YLNAPGET 272 G L F P++F+V GE I FKNNAG+PHNVVFDED +PSGVD SKIS +E LN GET Sbjct: 82 GSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDETALLNGAGET 141 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 + VTLT PG+YGFYC PH GAGMVGK+TV Sbjct: 142 YEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170
>PLAS1_POPNI (P00299) Plastocyanin A, chloroplast precursor| Length = 168 Score = 128 bits (321), Expect = 1e-29 Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEEYLNAPGET 272 G L F P++FS+ GE I FKNNAG+PHN+VFDED++PSGVD SKI S+E+ LNA GET Sbjct: 79 GSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGET 138 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 F V L+ G Y FYC PH GAGMVGKVTVN Sbjct: 139 FEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168
>PLAS_CHLFU (P00300) Plastocyanin| Length = 98 Score = 126 bits (316), Expect = 4e-29 Identities = 53/88 (60%), Positives = 69/88 (78%) Frame = -1 Query: 448 AGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETF 269 +G LVFEP+ ++KAGET+T+ NNAG+PHN+VFDED VPSG + +S E+YLNAPGE++ Sbjct: 10 SGALVFEPSSVTIKAGETVTWVNNAGFPHNIVFDEDEVPSGANAEALSHEDYLNAPGESY 69 Query: 268 SVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 S GTYG++CEPH GAGM G +TV Sbjct: 70 SAKFDTAGTYGYFCEPHQGAGMKGTITV 97
>PLAS_PHYPA (Q9SXW9) Plastocyanin, chloroplast precursor| Length = 168 Score = 125 bits (315), Expect = 5e-29 Identities = 57/88 (64%), Positives = 66/88 (75%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS 266 G L F P D SV AGE++TF NN G+PHNVVFDEDAVP+GV I+ E+YLN P E+FS Sbjct: 81 GALGFYPKDISVAAGESVTFVNNKGFPHNVVFDEDAVPAGVKTEDINHEDYLNGPNESFS 140 Query: 265 VTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 +T PGTY FYCEPH GAGM G VTV+ Sbjct: 141 ITFKTPGTYEFYCEPHQGAGMKGVVTVS 168
>PLAS_FRIAG (O22646) Plastocyanin, chloroplast precursor| Length = 166 Score = 125 bits (314), Expect = 7e-29 Identities = 59/90 (65%), Positives = 67/90 (74%), Gaps = 2/90 (2%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEEYLNAPGET 272 G L F P++ V AGET+ FKNNAG+PHNV+FDED VP GVD IS +E+ LNAPGET Sbjct: 77 GSLAFVPSNIEVAAGETVVFKNNAGFPHNVLFDEDEVPKGVDAGAISMKEEDLLNAPGET 136 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 FSVTL GTY YC PH GAGM GK+TVN Sbjct: 137 FSVTLKEKGTYSIYCSPHQGAGMAGKITVN 166
>PLAS_SCEOB (P26956) Plastocyanin, chloroplast precursor| Length = 145 Score = 122 bits (307), Expect = 5e-28 Identities = 51/88 (57%), Positives = 70/88 (79%) Frame = -1 Query: 448 AGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETF 269 +G LVFEP ++KAG+++T+ NNAG+PHN+VFDEDAVP+GV+ +S ++YLNAPGE++ Sbjct: 57 SGALVFEPATVTIKAGDSVTWTNNAGFPHNIVFDEDAVPAGVNADALSHDDYLNAPGESY 116 Query: 268 SVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 + G YG++CEPH GAGMVGKV V Sbjct: 117 TAKFDTAGEYGYFCEPHQGAGMVGKVIV 144
>PLAS_GINBI (P84338) Plastocyanin| Length = 99 Score = 121 bits (303), Expect = 1e-27 Identities = 59/92 (64%), Positives = 68/92 (73%), Gaps = 2/92 (2%) Frame = -1 Query: 451 TAGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEEYLNAPG 278 + G L F PN+ V AGE I FKNNAG+PHNV+FDEDAVP+GVDVS I S+E+ LNAPG Sbjct: 8 SGGELAFIPNELQVNAGEQIVFKNNAGFPHNVIFDEDAVPAGVDVSSISMSEEDLLNAPG 67 Query: 277 ETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 182 ET+ V L GTY F+C PH G GM G VTVN Sbjct: 68 ETYVVKLDKKGTYRFFCAPHQGIGMSGIVTVN 99
>PLAS_ENTPR (P07465) Plastocyanin| Length = 98 Score = 118 bits (295), Expect = 1e-26 Identities = 54/87 (62%), Positives = 66/87 (75%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS 266 G L F PN+ +V AGE+I F NNAG+PHN+VFDEDAVP+GVD IS E+YLN+ G+T Sbjct: 11 GSLAFVPNNITVGAGESIEFINNAGFPHNIVFDEDAVPAGVDADAISAEDYLNSKGQTVV 70 Query: 265 VTLTVPGTYGFYCEPHAGAGMVGKVTV 185 LT PGTYG YC+PH+GAGM +TV Sbjct: 71 RKLTTPGTYGVYCDPHSGAGMKMTITV 97
>PLAS_ULVAR (P13133) Plastocyanin| Length = 98 Score = 116 bits (291), Expect = 3e-26 Identities = 54/87 (62%), Positives = 63/87 (72%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS 266 G L F P+ SV AGE I F NNAG+PHN+VFDEDAVP+GVD IS ++YLN+ GET Sbjct: 11 GALAFVPSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVV 70 Query: 265 VTLTVPGTYGFYCEPHAGAGMVGKVTV 185 L+ PG YG YCEPHAGAGM +TV Sbjct: 71 RKLSTPGVYGVYCEPHAGAGMKMTITV 97
>PLAS_ULVPE (P56274) Plastocyanin| Length = 98 Score = 115 bits (289), Expect = 6e-26 Identities = 54/87 (62%), Positives = 63/87 (72%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS 266 G L F P+ SV AGE I F NNAG+PHN+VFDEDAVP+GVD IS ++YLN+ GET Sbjct: 11 GSLAFVPSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVV 70 Query: 265 VTLTVPGTYGFYCEPHAGAGMVGKVTV 185 L+ PG YG YCEPHAGAGM +TV Sbjct: 71 RKLSTPGVYGVYCEPHAGAGMKMTITV 97
>PLAS_SYNY3 (P21697) Plastocyanin precursor| Length = 126 Score = 92.4 bits (228), Expect = 7e-19 Identities = 45/88 (51%), Positives = 59/88 (67%) Frame = -1 Query: 448 AGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETF 269 +G LVFEP+ ++KAGE + + NN PHN+VF D V + +K+S + A GE+F Sbjct: 39 SGALVFEPSTVTIKAGEEVKWVNNKLSPHNIVFAADGVDADT-AAKLSHKGLAFAAGESF 97 Query: 268 SVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 + T T PGTY +YCEPH GAGMVGKV V Sbjct: 98 TSTFTEPGTYTYYCEPHRGAGMVGKVVV 125
>PLAS_PROHO (P50057) Plastocyanin precursor| Length = 131 Score = 89.0 bits (219), Expect = 7e-18 Identities = 42/84 (50%), Positives = 54/84 (64%) Frame = -1 Query: 436 VFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFSVTL 257 ++EP S+ AG+T+ F N PHNV+FD+ VP+G +S + APG +SVTL Sbjct: 49 LYEPKALSISAGDTVEFVMNKVGPHNVIFDK--VPAGESAPALSNTKLAIAPGSFYSVTL 106 Query: 256 TVPGTYGFYCEPHAGAGMVGKVTV 185 PGTY FYC PH GAGMVG +TV Sbjct: 107 GTPGTYSFYCTPHRGAGMVGTITV 130
>PLAS_ANAVT (Q3M9H8) Plastocyanin precursor| Length = 139 Score = 86.7 bits (213), Expect = 4e-17 Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 5/92 (5%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPS-GVDVSK-ISQEEYLNAPGET 272 G+LVFEP ++K G+T+ F NN PHNVVFD P+ D++K +S ++ L +PG++ Sbjct: 46 GLLVFEPAKLTIKPGDTVEFLNNKVPPHNVVFDATLNPAKSADLAKSLSHKQLLMSPGQS 105 Query: 271 FSVTLTV---PGTYGFYCEPHAGAGMVGKVTV 185 S T G Y FYCEPH GAGMVGK+TV Sbjct: 106 TSTTFPADAPAGDYSFYCEPHRGAGMVGKITV 137
>PLAS_ANASP (P46444) Plastocyanin precursor| Length = 139 Score = 85.5 bits (210), Expect = 8e-17 Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 5/92 (5%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPS-GVDVSK-ISQEEYLNAPGET 272 G+LVFEP ++K G+T+ F NN PHNVVFD P+ D++K +S ++ L +PG++ Sbjct: 46 GLLVFEPAKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQS 105 Query: 271 FSVTLTV---PGTYGFYCEPHAGAGMVGKVTV 185 S T G Y FYCEPH GAGMVGK+TV Sbjct: 106 TSTTFPADAPAGEYTFYCEPHRGAGMVGKITV 137
>PLAS_ANASO (O52830) Plastocyanin precursor| Length = 139 Score = 85.5 bits (210), Expect = 8e-17 Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 5/92 (5%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPS-GVDVSK-ISQEEYLNAPGET 272 G+LVFEP ++K G+T+ F NN PHNVVFD P+ D++K +S ++ L +PG++ Sbjct: 46 GLLVFEPAKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQS 105 Query: 271 FSVTLTV---PGTYGFYCEPHAGAGMVGKVTV 185 S T G Y FYCEPH GAGMVGK+TV Sbjct: 106 TSTTFPADAPAGEYTFYCEPHRGAGMVGKITV 137
>PLAS_ANAVA (P0C178) Plastocyanin| Length = 105 Score = 85.5 bits (210), Expect = 8e-17 Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 5/92 (5%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPS-GVDVSK-ISQEEYLNAPGET 272 G+LVFEP ++K G+T+ F NN PHNVVFD P+ D++K +S ++ L +PG++ Sbjct: 12 GLLVFEPAKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQS 71 Query: 271 FSVTLTV---PGTYGFYCEPHAGAGMVGKVTV 185 S T G Y FYCEPH GAGMVGK+TV Sbjct: 72 TSTTFPADAPAGEYTFYCEPHRGAGMVGKITV 103
>PLAS_SYNP7 (P55020) Plastocyanin precursor| Length = 125 Score = 84.3 bits (207), Expect = 2e-16 Identities = 39/87 (44%), Positives = 55/87 (63%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS 266 G+L FEP+ ++AG+T+ + NN PHNVV + ++S ++ +PGETF Sbjct: 46 GMLAFEPSTIEIQAGDTVQWVNNKLAPHNVVVEGQP--------ELSHKDLAFSPGETFE 97 Query: 265 VTLTVPGTYGFYCEPHAGAGMVGKVTV 185 T + PGTY +YCEPH GAGMVGK+ V Sbjct: 98 ATFSEPGTYTYYCEPHRGAGMVGKIVV 124
>PLAS_PHOLA (Q51883) Plastocyanin precursor| Length = 139 Score = 82.0 bits (201), Expect = 9e-16 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 5/93 (5%) Frame = -1 Query: 448 AGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVD--VSKISQEEYLNAPGE 275 +G+L FEP + +V G+T+ + NN PHN++FD+ VP K+S + + +PGE Sbjct: 45 SGLLQFEPANVTVHPGDTVKWVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGE 104 Query: 274 TFSVTLTVP---GTYGFYCEPHAGAGMVGKVTV 185 ++ +T + GTY +YC PH GAGMVGK+TV Sbjct: 105 SYEITFSSDFPAGTYTYYCAPHRGAGMVGKITV 137
>AZUP_ACHCY (P19567) Pseudoazurin precursor (Blue copper protein)| Length = 152 Score = 60.1 bits (144), Expect = 4e-09 Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITF-KNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETF 269 G +VFEP V G+T+TF + G HNV + +P G + K + E + Sbjct: 42 GAMVFEPASLKVAPGDTVTFIPTDKG--HNVETIKGMIPDGAEAFK-------SKINENY 92 Query: 268 SVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 VT T PG YG C PH G GMVG V V Sbjct: 93 KVTFTAPGVYGVKCTPHYGMGMVGVVQV 120
>PLAS_DRYCA (Q7SIB8) Plastocyanin| Length = 102 Score = 59.7 bits (143), Expect = 5e-09 Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 5/92 (5%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDA-----VPSGVDVSKISQEEYLNAP 281 G F P+ +V AGE + F HN+VFD A V S + + + + + L+ Sbjct: 10 GNFKFYPDSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSED 69 Query: 280 GETFSVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 +F ++ PGTY FYC PH A M G +TV Sbjct: 70 EPSFKAKVSTPGTYTFYCTPHKSANMKGTLTV 101
>AZUP_RHILV (Q52825) Putative pseudoazurin precursor (Blue copper protein)| Length = 152 Score = 55.5 bits (132), Expect = 9e-08 Identities = 30/89 (33%), Positives = 42/89 (47%) Frame = -1 Query: 451 TAGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGET 272 T G +VFEP + G+T+TF HNV + +P GV ++ + P E Sbjct: 35 TDGAMVFEPGFLKIAPGDTVTFIPT-DKSHNVETFKGLIPDGVP-------DFKSKPNEQ 86 Query: 271 FSVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 + V +PG Y C PH G GMV + V Sbjct: 87 YQVKFDIPGAYVLKCTPHVGMGMVALIQV 115
>AZUP_PARPN (P80401) Pseudoazurin precursor| Length = 145 Score = 55.5 bits (132), Expect = 9e-08 Identities = 32/88 (36%), Positives = 46/88 (52%) Frame = -1 Query: 448 AGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETF 269 +G +VFEP + G+ I F HNV ++ +P GV E + + E++ Sbjct: 35 SGAMVFEPAFVRAEPGDVINFVPT-DKSHNVEAIKEILPEGV-------ESFKSKINESY 86 Query: 268 SVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 ++T+T PG YG C PH G GMVG V V Sbjct: 87 TLTVTEPGLYGVKCTPHFGMGMVGLVQV 114
>AZUP_PARDE (P80649) Pseudoazurin| Length = 123 Score = 54.7 bits (130), Expect = 2e-07 Identities = 32/88 (36%), Positives = 45/88 (51%) Frame = -1 Query: 448 AGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETF 269 +G +VFEP + G+ I F HNV ++ +P GV+ K + E + Sbjct: 13 SGAMVFEPAFIRAEPGDVINFIPT-DKSHNVEAIKEILPEGVETFK-------SKINEAY 64 Query: 268 SVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 ++T+T PG YG C PH G GMVG V V Sbjct: 65 ALTVTEPGLYGVKCTPHFGMGMVGLVQV 92
>AMCY_METEX (P04172) Amicyanin-alpha precursor| Length = 119 Score = 50.4 bits (119), Expect = 3e-06 Identities = 31/83 (37%), Positives = 41/83 (49%) Frame = -1 Query: 433 FEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFSVTLT 254 F+ + +KAG +T+ N PHNV F SG V K + L + +T+SV Sbjct: 44 FQTPEVRIKAGSAVTWTNTEALPHNVHFK-----SGPGVEKDVEGPMLRS-NQTYSVKFN 97 Query: 253 VPGTYGFYCEPHAGAGMVGKVTV 185 PGTY + C PH M GKV V Sbjct: 98 APGTYDYICTPH--PFMKGKVVV 118
>AZUP_ALCFA (P04377) Pseudoazurin precursor (Cupredoxin) (Blue copper protein)| Length = 146 Score = 49.3 bits (116), Expect = 6e-06 Identities = 28/87 (32%), Positives = 41/87 (47%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFS 266 G +VFEP G+T+TF HNV +D +P G E++ + E + Sbjct: 37 GAMVFEPAYIKANPGDTVTFIP-VDKGHNVESIKDMIPEGA-------EKFKSKINENYV 88 Query: 265 VTLTVPGTYGFYCEPHAGAGMVGKVTV 185 +T+T PG Y C PH GM+ + V Sbjct: 89 LTVTQPGAYLVKCTPHYAMGMIALIAV 115
>AMCY_PARDE (P22364) Amicyanin precursor| Length = 131 Score = 46.6 bits (109), Expect = 4e-05 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%) Frame = -1 Query: 433 FEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAP----GETFS 266 +E + VK G+T+T+ N PHNV F V+ + E L P + +S Sbjct: 56 YETPELHVKVGDTVTWINREAMPHNVHF----------VAGVLGEAALKGPMMKKEQAYS 105 Query: 265 VTLTVPGTYGFYCEPHAGAGMVGKVTV 185 +T T GTY ++C PH M GKV V Sbjct: 106 LTFTEAGTYDYHCTPH--PFMRGKVVV 130
>AMCY_PARVE (P22365) Amicyanin precursor| Length = 132 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/79 (29%), Positives = 40/79 (50%) Frame = -1 Query: 421 DFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFSVTLTVPGT 242 + ++KAGET+ + N PHNV F + V ++ ++ + +++T G+ Sbjct: 61 EVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRGEMMTKD------QAYAITFNEAGS 114 Query: 241 YGFYCEPHAGAGMVGKVTV 185 Y ++C PH M GKV V Sbjct: 115 YDYFCTPH--PFMRGKVIV 131
>AZUP_METEX (P04171) Pseudoazurin| Length = 123 Score = 42.0 bits (97), Expect = 0.001 Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITF-KNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLNAPGETF 269 G++VF+P +K G++I F + G HNV + P G D K + G+ Sbjct: 14 GMMVFDPALVRLKPGDSIKFLPTDKG--HNVETIKGMAPDGADYVKTTV-------GQEA 64 Query: 268 SVTLTVPGTYGFYCEPHAGAGMVGKVTV 185 V G YGF C PH GMV V V Sbjct: 65 VVKFDKEGVYGFKCAPHYMMGMVALVVV 92
>PLAS_THAOC (P84800) Plastocyanin (Fragments)| Length = 38 Score = 35.4 bits (80), Expect = 0.097 Identities = 21/41 (51%), Positives = 23/41 (56%) Frame = -1 Query: 445 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGV 323 G+LVFEP KAG PHNVVFDED +P GV Sbjct: 13 GLLVFEP----AKAG-----------PHNVVFDEDNIPPGV 38
>NOLL_RHISN (P55431) Nodulation protein nolL (EC 2.3.1.-)| Length = 366 Score = 28.9 bits (63), Expect = 9.1 Identities = 16/66 (24%), Positives = 29/66 (43%) Frame = -1 Query: 274 TFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN**SYQFGSIDRSNWTCRHACIILINCTLY 95 T S+ + TY F+C G + T+ +++N RH +++ +C Sbjct: 178 TLSIVPLLRYTYPFFC-----LGFLFAQTIE---------EQANTMLRHKSLLMFSCWAV 223 Query: 94 VCICFL 77 C+CFL Sbjct: 224 ACLCFL 229 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,672,198 Number of Sequences: 219361 Number of extensions: 971821 Number of successful extensions: 2896 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 2810 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2856 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)