Clone Name | rbasd14k08 |
---|---|
Clone Library Name | barley_pub |
>emb|Z28347.1|HVPLASC1 H.vulgare (NK 1558) gene for plastocyanin Length = 1884 Score = 955 bits (482), Expect = 0.0 Identities = 515/524 (98%), Gaps = 9/524 (1%) Strand = Plus / Minus Query: 1 aattgattaagaagaaggactagtacgtacgtacttatcacgaagagcctcatcgatctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1612 aattgattaagaagaaggactagtacgtacgtacttatcacgaagagcctcatcgatctt 1553 Query: 61 atagagtagagtagagtaga-----aaacatatacatacatatagcgtacaattaatcaa 115 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1552 atagagtagagtagagtagagtagaaaacatatacatacatatagcgtacaattaatcaa 1493 Query: 116 tatgatgcatgcatgacgacacgtccaatttgagcgatcaatcgacccaaattggtagct 175 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1492 tatgatgcatgca---cgacacgtccaatttgagcgatcaatcgacccaaattggtagct 1436 Query: 176 tcattagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaa 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1435 tcattagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaa 1376 Query: 236 gccgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1375 gccgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggta 1316 Query: 296 ctcctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacac 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1315 ctcctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacac 1256 Query: 356 cacgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgct 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1255 cacgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgct 1196 Query: 416 gaagtcgttgggctcgaacaccagcacgcccgccgttggcacccaggagcacgtcctgtg 475 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1195 gaagtcgttgggctcgaacaccagcacg-ccgccgttggcacccaggagcacgtcctgtg 1137 Query: 476 ccatcgcggacccgcccagcagcatggcgccggcggccatggcc 519 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 ccatcgcggacccgcccagcagcatggcgccggcggccatggcc 1093
>emb|Y00704.1|HVPCR Barley mRNA for plastocyanin precursor Length = 662 Score = 884 bits (446), Expect = 0.0 Identities = 479/488 (98%), Gaps = 9/488 (1%) Strand = Plus / Minus Query: 37 atcacgaagagcctcatcgatcttatagagtagagtagagtaga-----aaacatataca 91 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 662 atcacgaagagcctcatcgatcttatagagtagagtagagtagagtagaaaacatataca 603 Query: 92 tacatatagcgtacaattaatcaatatgatgcatgcatgacgacacgtccaatttgagcg 151 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 602 tacatatagcgtacaattaatcaatatgatgcatgca---cgacacgtccaatttgagcg 546 Query: 152 atcaatcgacccaaattggtagcttcattagttgacggtgacctttccgaccatgccggc 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 atcaatcgacccaaattggtagcttcattagttgacggtgacctttccgaccatgccggc 486 Query: 212 cccagcgtggggctcgcagtagaagccgtaggtgccggggacggtgagggtgacggagaa 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 cccagcgtggggctcgcagtagaagccgtaggtgccggggacggtgagggtgacggagaa 426 Query: 272 ggtctcgccgggggcgttgaggtactcctcctgggagatcttggagacgtcgacgccgga 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 ggtctcgccgggggcgttgaggtactcctcctgggagatcttggagacgtcgacgccgga 366 Query: 332 gggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaaggt 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 gggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaaggt 306 Query: 392 gatggtctcgccggccttgacgctgaagtcgttgggctcgaacaccagcacgcccgccgt 451 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 305 gatggtctcgccggccttgacgctgaagtcgttgggctcgaacaccagcacg-ccgccgt 247 Query: 452 tggcacccaggagcacgtcctgtgccatcgcggacccgcccagcagcatggcgccggcgg 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 tggcacccaggagcacgtcctgtgccatcgcggacccgcccagcagcatggcgccggcgg 187 Query: 512 ccatggcc 519 |||||||| Sbjct: 186 ccatggcc 179
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 357 bits (180), Expect = 2e-95 Identities = 303/342 (88%), Gaps = 4/342 (1%) Strand = Plus / Plus Query: 178 attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 237 ||||||||||||||||||| |||||||| || || || ||||| |||||||||||||||| Sbjct: 148657 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaagc 148716 Query: 238 cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 297 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 148717 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 148776 Query: 298 cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 357 ||||||| || |||||||| |||||||||||| || || ||||||||||||||||||| Sbjct: 148777 cctcctgcgatatcttggacacgtcgacgccgctcggaaccgcgtcctcgtcgaacacca 148836 Query: 358 cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 417 ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| ||| Sbjct: 148837 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 148896 Query: 418 agtcgttgggctcgaacaccagcacgcccgccgttggcacccaggagcacgtcctgtgcc 477 ||||||| |||||||||||||||||| ||||| ||||| || || ||||| ||||| ||| Sbjct: 148897 agtcgttcggctcgaacaccagcacg-ccgccattggcgccgagaagcacctcctgcgcc 148955 Query: 478 atcgcggacccgcccagcagcatggcgccggcggccatggcc 519 || ||| |||||| |||||||||| |||||||| |||| Sbjct: 148956 atggcg---ccgcccgcgagcatggcgctggcggccacggcc 148994
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 357 bits (180), Expect = 2e-95 Identities = 303/342 (88%), Gaps = 4/342 (1%) Strand = Plus / Plus Query: 178 attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 237 ||||||||||||||||||| |||||||| || || || ||||| |||||||||||||||| Sbjct: 13553 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaagc 13612 Query: 238 cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 297 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 13613 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 13672 Query: 298 cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 357 ||||||| || |||||||| |||||||||||| || || ||||||||||||||||||| Sbjct: 13673 cctcctgcgatatcttggacacgtcgacgccgctcggaaccgcgtcctcgtcgaacacca 13732 Query: 358 cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 417 ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| ||| Sbjct: 13733 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 13792 Query: 418 agtcgttgggctcgaacaccagcacgcccgccgttggcacccaggagcacgtcctgtgcc 477 ||||||| |||||||||||||||||| ||||| ||||| || || ||||| ||||| ||| Sbjct: 13793 agtcgttcggctcgaacaccagcacg-ccgccattggcgccgagaagcacctcctgcgcc 13851 Query: 478 atcgcggacccgcccagcagcatggcgccggcggccatggcc 519 || ||| |||||| |||||||||| |||||||| |||| Sbjct: 13852 atggcg---ccgcccgcgagcatggcgctggcggccacggcc 13890
>dbj|AK070447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049C22, full insert sequence Length = 703 Score = 357 bits (180), Expect = 2e-95 Identities = 303/342 (88%), Gaps = 4/342 (1%) Strand = Plus / Minus Query: 178 attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 237 ||||||||||||||||||| |||||||| || || || ||||| |||||||||||||||| Sbjct: 532 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaagc 473 Query: 238 cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 297 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 472 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 413 Query: 298 cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 357 ||||||| || |||||||| |||||||||||| || || ||||||||||||||||||| Sbjct: 412 cctcctgcgatatcttggacacgtcgacgccgctcggaaccgcgtcctcgtcgaacacca 353 Query: 358 cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 417 ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| ||| Sbjct: 352 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 293 Query: 418 agtcgttgggctcgaacaccagcacgcccgccgttggcacccaggagcacgtcctgtgcc 477 ||||||| |||||||||||||||||| ||||| ||||| || || ||||| ||||| ||| Sbjct: 292 agtcgttcggctcgaacaccagcacg-ccgccattggcgccgagaagcacctcctgcgcc 234 Query: 478 atcgcggacccgcccagcagcatggcgccggcggccatggcc 519 || ||| |||||| |||||||||| |||||||| |||| Sbjct: 233 atggcg---ccgcccgcgagcatggcgctggcggccacggcc 195
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 357 bits (180), Expect = 2e-95 Identities = 303/342 (88%), Gaps = 4/342 (1%) Strand = Plus / Minus Query: 178 attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 237 ||||||||||||||||||| |||||||| || || || ||||| |||||||||||||||| Sbjct: 71885 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaagc 71826 Query: 238 cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 297 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 71825 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 71766 Query: 298 cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 357 ||||||| || |||||||| |||||||||||| || || ||||||||||||||||||| Sbjct: 71765 cctcctgcgatatcttggacacgtcgacgccgctcggaaccgcgtcctcgtcgaacacca 71706 Query: 358 cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 417 ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| ||| Sbjct: 71705 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 71646 Query: 418 agtcgttgggctcgaacaccagcacgcccgccgttggcacccaggagcacgtcctgtgcc 477 ||||||| |||||||||||||||||| ||||| ||||| || || ||||| ||||| ||| Sbjct: 71645 agtcgttcggctcgaacaccagcacg-ccgccattggcgccgagaagcacctcctgcgcc 71587 Query: 478 atcgcggacccgcccagcagcatggcgccggcggccatggcc 519 || ||| |||||| |||||||||| |||||||| |||| Sbjct: 71586 atggcg---ccgcccgcgagcatggcgctggcggccacggcc 71548
>gb|AF093636.1|AF093636 Oryza sativa plastocyanin precursor, mRNA, complete cds Length = 676 Score = 357 bits (180), Expect = 2e-95 Identities = 303/342 (88%), Gaps = 4/342 (1%) Strand = Plus / Minus Query: 178 attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 237 ||||||||||||||||||| |||||||| || || || ||||| |||||||||||||||| Sbjct: 514 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaagc 455 Query: 238 cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 297 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 395 Query: 298 cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 357 ||||||| || |||||||| |||||||||||| || || ||||||||||||||||||| Sbjct: 394 cctcctgcgatatcttggacacgtcgacgccgctcggaaccgcgtcctcgtcgaacacca 335 Query: 358 cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 417 ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| ||| Sbjct: 334 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 275 Query: 418 agtcgttgggctcgaacaccagcacgcccgccgttggcacccaggagcacgtcctgtgcc 477 ||||||| |||||||||||||||||| ||||| ||||| || || ||||| ||||| ||| Sbjct: 274 agtcgttcggctcgaacaccagcacg-ccgccattggcgccgagaagcacctcctgcgcc 216 Query: 478 atcgcggacccgcccagcagcatggcgccggcggccatggcc 519 || ||| |||||| |||||||||| |||||||| |||| Sbjct: 215 atggcg---ccgcccgcgagcatggcgctggcggccacggcc 177
>gb|AF009412.1|AF009412 Oryza sativa plastocyanin precursor, mRNA, complete cds Length = 745 Score = 319 bits (161), Expect = 5e-84 Identities = 298/342 (87%), Gaps = 4/342 (1%) Strand = Plus / Minus Query: 178 attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 237 ||||||||||||||||||| |||||||| || || || ||||| |||||||||||||| | Sbjct: 526 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaanc 467 Query: 238 cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 297 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 466 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 407 Query: 298 cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 357 ||||||| || || ||||| | || ||||||| || || ||||||| ||||||||||| Sbjct: 406 cctcctgcgatattttggacaagttgacgccgctcggaaccgcgtccttgtcgaacacca 347 Query: 358 cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 417 ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| ||| Sbjct: 346 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 287 Query: 418 agtcgttgggctcgaacaccagcacgcccgccgttggcacccaggagcacgtcctgtgcc 477 ||||||| |||||||||||||||||| ||||| ||||| || || ||||| ||||| ||| Sbjct: 286 agtcgttcggctcgaacaccagcacg-ccgccattggcgccgagaagcacctcctgcgcc 228 Query: 478 atcgcggacccgcccagcagcatggcgccggcggccatggcc 519 || ||| |||||| |||||||||| |||||||| |||| Sbjct: 227 atggcg---ccgcccgcgagcatggcgctggcggccacggcc 189
>gb|AY104253.1| Zea mays PCO133617 mRNA sequence Length = 1001 Score = 244 bits (123), Expect = 2e-61 Identities = 228/263 (86%) Strand = Plus / Minus Query: 171 tagcttcattagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcag 230 |||||| ||||||||||||||| ||| |||||||| ||||| || || ||||||||| Sbjct: 737 tagcttaattagttgacggtgatcttgccgaccattccggctccttgatgcggctcgcag 678 Query: 231 tagaagccgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttg 290 |||||||||||||| || || |||||||||||||||||| |||||||||| || |||||| Sbjct: 677 tagaagccgtaggttcccggcacggtgagggtgacggagtaggtctcgcctggcgcgttg 618 Query: 291 aggtactcctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcg 350 |||||||||||||| |||||||||| | ||||||||||| ||||| |||| |||||| Sbjct: 617 aggtactcctcctgcgagatcttggtggcgtcgacgccgctcggcacctcgtcttcgtcg 558 Query: 351 aacaccacgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttg 410 || || |||||||||||| | ||||||||||||||||| |||||||| |||||||||||| Sbjct: 557 aagacgacgttgtgcgggaagccggcgttgttcttgaatgtgatggtgtcgccggccttg 498 Query: 411 acgctgaagtcgttgggctcgaa 433 ||| |||| | | |||||||||| Sbjct: 497 acggtgaactggctgggctcgaa 475
>gb|AY614612.1| Ulva pertusa plastocyanin precursor, mRNA, complete cds; nuclear gene for plastid product Length = 787 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 203 catgccggccccagcgtggggctcgcagtagaagccgtaggtgccgg 249 ||||||||| ||||| |||||||||||||||| |||||| ||||||| Sbjct: 436 catgccggcgccagcatggggctcgcagtagacgccgtatgtgccgg 390
>gb|AF031545.1|AF031545 Fritillaria agrestis plastocyanin (ploc) mRNA, complete cds Length = 720 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 342 tcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 388 ||||| ||||||| ||| ||||||||| ||||||||||||||||||| Sbjct: 366 tcctcatcgaacaacacattgtgcgggaacccggcgttgttcttgaa 320
>ref|NM_106259.2| Arabidopsis thaliana copper ion binding / electron transporter AT1G76100 mRNA, complete cds Length = 771 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 340 cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 388 |||| ||||||||||||||||| || ||| |||| |||||||||||||| Sbjct: 374 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 326
>gb|BT025525.1| Arabidopsis thaliana At1g76100 mRNA, complete cds Length = 516 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 340 cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 388 |||| ||||||||||||||||| || ||| |||| |||||||||||||| Sbjct: 349 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 301
>emb|Z83321.1|ATZ83321 A.thaliana 16 kb chromosome 1 DNA fragment Length = 16202 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 340 cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 388 |||| ||||||||||||||||| || ||| |||| |||||||||||||| Sbjct: 8735 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 8687
>gb|BT021977.1| Arabidopsis thaliana At1g76100 mRNA, complete cds Length = 746 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 340 cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 388 |||| ||||||||||||||||| || ||| |||| |||||||||||||| Sbjct: 385 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 337
>gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I, complete sequence Length = 97554 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 340 cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 388 |||| ||||||||||||||||| || ||| |||| |||||||||||||| Sbjct: 10562 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 10610
>emb|X02965.1|SPPCYA Silene pratensis mRNA for plastocyanin precursor Length = 773 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 342 tcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaaggtgat 394 ||||||||||| || || ||||| ||| |||| |||||||||||||||||||| Sbjct: 402 tcctcgtcgaagacgacattgtgtgggaacccagcgttgttcttgaaggtgat 350
>gb|M20937.1|ATHPCG A.thaliana plastocyanin gene, complete cds Length = 1447 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 340 cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 388 |||| ||||||||||||||||| || ||| |||| |||||||||||||| Sbjct: 1005 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 957
>emb|X04693.1|SOPCG Spinach gene for plastocyanin Length = 1000 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 319 cgtcgacgccggagggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgt 378 ||||||| |||||||| | |||||||||| ||||| |||||||| ||| | ||||| | Sbjct: 611 cgtcgacaccggagggaatctcgtcctcgtcaaacactacgttgtgggggaatccggcat 552 Query: 379 tgttcttgaa 388 |||||||||| Sbjct: 551 tgttcttgaa 542
>gb|DQ226793.1| Boechera divaricarpa isolate SLW-B-C02 mRNA sequence Length = 701 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 340 cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 388 ||||||| |||||||| |||||||| ||| |||| || ||||||||||| Sbjct: 391 cgtcctcatcgaacacaacgttgtgtgggaacccagcattgttcttgaa 343
>gb|J05524.1|CREAPCYN C.reinhardtii apoplastocyanin (PC6-2) mRNA, complete cds Length = 577 Score = 48.1 bits (24), Expect = 0.029 Identities = 72/88 (81%) Strand = Plus / Minus Query: 324 acgccggagggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttc 383 ||||||||||| | ||| ||||||||||| || | |||||| ||| | || ||||||||| Sbjct: 314 acgccggaggggatggcatcctcgtcgaagacgatgttgtgggggaagccagcgttgttc 255 Query: 384 ttgaaggtgatggtctcgccggccttga 411 |||| | | ||||||||||| ||||| Sbjct: 254 acgaagttcacggtctcgccggacttga 227 Score = 44.1 bits (22), Expect = 0.46 Identities = 79/98 (80%) Strand = Plus / Minus Query: 198 ccgaccatgccggccccagcgtggggctcgcagtagaagccgtaggtgccggggacggtg 257 ||||||||||| || || |||||||||||||||| ||||||| ||||| |||| Sbjct: 440 ccgaccatgccagcgccctggtggggctcgcagtagtagccgtactcgccggcagcggtc 381 Query: 258 agggtgacggagaaggtctcgccgggggcgttgaggta 295 || | || ||| ||||||||||||||||||| ||||| Sbjct: 380 agcttcaccgagtaggtctcgccgggggcgttcaggta 343
>emb|Z50186.1|PNPCBMR P.nigra mRNA for plastocyanin b Length = 699 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 339 gcgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaag 389 |||||||||||||| | ||||| || ||| ||||||| |||||||||||| Sbjct: 372 gcgtcctcgtcgaagagaacgttatgtgggaacccggcattgttcttgaag 322
>gb|AC007594.5| Drosophila melanogaster, chromosome 3R, region 87B-87C, BAC clone BACR28I14, complete sequence Length = 161601 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 tagaaaacatatacatacatata 99 ||||||||||||||||||||||| Sbjct: 14856 tagaaaacatatacatacatata 14878
>gb|AC009741.5|AC009741 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone BACR44K17, complete sequence Length = 166863 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 tagaaaacatatacatacatata 99 ||||||||||||||||||||||| Sbjct: 137819 tagaaaacatatacatacatata 137841
>gb|AE003695.2| Drosophila melanogaster chromosome 3R, section 33 of 118 of the complete sequence Length = 225655 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 tagaaaacatatacatacatata 99 ||||||||||||||||||||||| Sbjct: 169114 tagaaaacatatacatacatata 169136
>gb|M97702.1|DROGLUSTD Drosophila melanogaster glutathione S-transferase gene Length = 14707 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 tagaaaacatatacatacatata 99 ||||||||||||||||||||||| Sbjct: 8862 tagaaaacatatacatacatata 8840
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 198 ccgaccatgccggccccagcgtggggctcgcagtagaagccgtaggtgcc 247 ||||||||||| || || |||||||||||||||| || |||||||||| Sbjct: 962935 ccgaccatgccagcaccgcggtggggctcgcagtagtagtcgtaggtgcc 962984
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Plus Query: 192 acctttccgaccatgccggccccagcgtggggctcgcagtag 233 ||||| || ||||||||||| ||| |||||||||||||||| Sbjct: 903742 accttgccaaccatgccggcaccacggtggggctcgcagtag 903783
>gb|DQ122875.1| Chlamydomonas incerta chloroplast plastocyanin (petE) mRNA, complete cds; nuclear gene for chloroplast product Length = 620 Score = 44.1 bits (22), Expect = 0.46 Identities = 64/78 (82%) Strand = Plus / Minus Query: 218 gtggggctcgcagtagaagccgtaggtgccggggacggtgagggtgacggagaaggtctc 277 |||||||||||||||| ||||||| ||||| | ||| || ||| ||| ||||||| Sbjct: 441 gtggggctcgcagtagtagccgtactcgccggcggtggtcagcttgagcgagtaggtctc 382 Query: 278 gccgggggcgttgaggta 295 |||||||||||| ||||| Sbjct: 381 gccgggggcgttcaggta 364 Score = 44.1 bits (22), Expect = 0.46 Identities = 73/90 (81%) Strand = Plus / Minus Query: 324 acgccggagggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttc 383 ||||| ||||| | ||| ||||| ||||| || | |||||| ||| | || ||||||||| Sbjct: 335 acgcccgaggggatggcatcctcatcgaagacgatgttgtgggggaagccagcgttgttc 276 Query: 384 ttgaaggtgatggtctcgccggccttgacg 413 |||| | ||||||||||||| ||||||| Sbjct: 275 acgaagttaatggtctcgccggacttgacg 246
>gb|AC023740.4| Drosophila melanogaster X BAC RP98-27J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163764 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaaaa 83 |||||||||||||||||||||| Sbjct: 79554 tagagtagagtagagtagaaaa 79575
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 488 cgcccagcagcatggcgccggc 509 |||||||||||||||||||||| Sbjct: 4921217 cgcccagcagcatggcgccggc 4921238
>gb|AC119572.26| Ustilago hordei strain 4875-4 clone uhobac-5d9, complete sequence Length = 152059 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 384 ttgaaggtgatggtctcgccgg 405 |||||||||||||||||||||| Sbjct: 108234 ttgaaggtgatggtctcgccgg 108213
>gb|AE012090.1| Xanthomonas axonopodis pv. citri str. 306, section 468 of 469 of the complete genome Length = 10947 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 488 cgcccagcagcatggcgccggc 509 |||||||||||||||||||||| Sbjct: 5903 cgcccagcagcatggcgccggc 5924
>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364 Length = 526707 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 384 ttgaaggtgatggtctcgccgg 405 |||||||||||||||||||||| Sbjct: 478082 ttgaaggtgatggtctcgccgg 478061
>gb|AE003435.3| Drosophila melanogaster chromosome X, section 19 of 74 of the complete sequence Length = 290042 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaaaa 83 |||||||||||||||||||||| Sbjct: 5058 tagagtagagtagagtagaaaa 5079
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 488 cgcccagcagcatggcgccggc 509 |||||||||||||||||||||| Sbjct: 4922453 cgcccagcagcatggcgccggc 4922474
>gb|L07282.1|CREPETE Chlamydomonas reinhardtii plastocyanin (petE) gene, complete cds Length = 3380 Score = 44.1 bits (22), Expect = 0.46 Identities = 64/78 (82%) Strand = Plus / Minus Query: 218 gtggggctcgcagtagaagccgtaggtgccggggacggtgagggtgacggagaaggtctc 277 |||||||||||||||| ||||||| ||||| |||| || | || ||| ||||||| Sbjct: 2666 gtggggctcgcagtagtagccgtactcgccggcagcggtcagcttcaccgagtaggtctc 2607 Query: 278 gccgggggcgttgaggta 295 |||||||||||| ||||| Sbjct: 2606 gccgggggcgttcaggta 2589
>dbj|AB026687.1| Physcomitrella patens mRNA for plastocyanin precursor, complete cds Length = 816 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 222 ggctcgcagtagaagccgtaggtgccgggg 251 |||||||||||||| |||||||||||||| Sbjct: 533 ggctcgcagtagaactcgtaggtgccgggg 504
>gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, complete sequence Length = 156835 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 tatagagtagagtagagtaga 80 ||||||||||||||||||||| Sbjct: 10719 tatagagtagagtagagtaga 10739
>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence Length = 178764 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtagaa 81 ||||||||||||||||||||| Sbjct: 81016 atagagtagagtagagtagaa 81036 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 81092 tagagtagagtagagtagaa 81111 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 81041 atagagtagagtagagtaga 81060
>gb|AC150415.3| Branchiostoma floridae clone CH302-62D14, complete sequence Length = 147823 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaaa 82 ||||||||||||||||||||| Sbjct: 9753 tagagtagagtagagtagaaa 9733
>gb|AF101236.1| Naja sputatrix neutral phospholipase A2 (NPLA2) gene, complete cds Length = 5879 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 tatagagtagagtagagtaga 80 ||||||||||||||||||||| Sbjct: 5167 tatagagtagagtagagtaga 5187 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 5210 tagagtagagtagagtagaa 5229 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 5199 atagagtagagtagagtaga 5218 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 5174 tagagtagagtagagtagaa 5193
>gb|AF101235.1| Naja sputatrix acidic phospholipase A2 (APLA2) gene, complete cds Length = 5879 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 tatagagtagagtagagtaga 80 ||||||||||||||||||||| Sbjct: 5167 tatagagtagagtagagtaga 5187 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 5210 tagagtagagtagagtagaa 5229 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 5199 atagagtagagtagagtaga 5218 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 5174 tagagtagagtagagtagaa 5193
>gb|AC112273.4| Mus musculus BAC clone RP24-122H5 from 3, complete sequence Length = 180155 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtagaa 81 ||||||||||||||||||||| Sbjct: 23590 atagagtagagtagagtagaa 23610
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 tgttcttgaaggtgatggtct 399 ||||||||||||||||||||| Sbjct: 1887141 tgttcttgaaggtgatggtct 1887121
>emb|AL390056.7| Human DNA sequence from clone RP3-493I16 on chromosome 6 Contains the 5' end of the RAB3IP2 gene for RAB3 interacting protein 2 and a CpG island, complete sequence Length = 62390 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 agaaaacatatacatacatat 98 ||||||||||||||||||||| Sbjct: 54178 agaaaacatatacatacatat 54158
>gb|AC128655.8| Homo sapiens 3 BAC RP11-260O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 88017 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 gaaaacatatacatacatata 99 ||||||||||||||||||||| Sbjct: 15125 gaaaacatatacatacatata 15105
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 380 gttcttgaaggtgatggtctcgccg 404 |||||||||||||||||||| |||| Sbjct: 246816 gttcttgaaggtgatggtcttgccg 246840
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 cggcgtcctcgtcgaacacca 357 ||||||||||||||||||||| Sbjct: 9780 cggcgtcctcgtcgaacacca 9760
>dbj|AB223673.1| Aspergillus oryzae cDNA, contig sequence: AoEST0513 Length = 679 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 402 ccggccttgacgctgaagtcgttgg 426 |||||||||||| |||||||||||| Sbjct: 233 ccggccttgacggtgaagtcgttgg 209
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 402 ccggccttgacgctgaagtcgttgg 426 |||||||||||| |||||||||||| Sbjct: 1916240 ccggccttgacggtgaagtcgttgg 1916264
>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence Length = 214702 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 gaaaacatatacatacatata 99 ||||||||||||||||||||| Sbjct: 80589 gaaaacatatacatacatata 80609
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 atggtctcgccggccttgacg 413 ||||||||||||||||||||| Sbjct: 1713808 atggtctcgccggccttgacg 1713828
>gb|AC159909.8| Mus musculus 10 BAC RP23-312M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184546 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtagaa 81 ||||||||||||||||||||| Sbjct: 101295 atagagtagagtagagtagaa 101275 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 101314 tagagtagagtagagtagaa 101295
>gb|AF260581.1|AF260581 Amycolatopsis mediterranei plasmid pHGF8002 tripeptidyl aminopeptidase gene, partial cds; 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase gene, complete cds; and 2,5 dichloro-2,5 cyclohexadiene-1,4 diol dehydrogenase gene, partial cds Length = 2049 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 319 cgtcgacgccggagggcacggcgtc 343 |||||||||||| |||||||||||| Sbjct: 158 cgtcgacgccggcgggcacggcgtc 182
>gb|AC153941.3| Mus musculus 10 BAC RP24-403F8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205654 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtagaa 81 ||||||||||||||||||||| Sbjct: 19438 atagagtagagtagagtagaa 19418 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 19457 tagagtagagtagagtagaa 19438
>emb|CR788232.9| Zebrafish DNA sequence from clone DKEY-283M16 in linkage group 2, complete sequence Length = 70979 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtagaa 81 ||||||||||||||||||||| Sbjct: 60697 atagagtagagtagagtagaa 60677
>dbj|AP004948.1| Lotus japonicus genomic DNA, chromosome , clone:LjT35I07, TM0121b, complete sequence Length = 56086 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 342 tcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaaggtgat 394 ||||||||||| || |||||||| ||| | || || ||||||||||| ||||| Sbjct: 47362 tcctcgtcgaagacaacgttgtgagggaaaccagcattgttcttgaacgtgat 47310
>gb|AC115939.8| Mus musculus chromosome 3, clone RP24-549I13, complete sequence Length = 178373 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtagaa 81 ||||||||||||||||||||| Sbjct: 172923 atagagtagagtagagtagaa 172943
>gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, complete sequence Length = 265797 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 acatatacatacatatagcgtaca 106 ||||||||||||||||| |||||| Sbjct: 81949 acatatacatacatatatcgtaca 81926
>gb|AC123743.11| Mus musculus chromosome 5, clone RP24-116M4, complete sequence Length = 177350 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 19624 atagagtagagtagagtaga 19643
>ref|XM_483748.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1139 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tggcgccggcggccatggcc 519 |||||||||||||||||||| Sbjct: 99 tggcgccggcggccatggcc 118
>gb|AC005179.1| Homo sapiens chromosome 5, P1 clone 1041F10 (LBNL H88), complete sequence Length = 59765 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tagaaaacatatacatacat 96 |||||||||||||||||||| Sbjct: 37318 tagaaaacatatacatacat 37299
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gagggcacggcgtcctcgtcgaac 353 ||||||||||||||||||| |||| Sbjct: 4219645 gagggcacggcgtcctcgttgaac 4219622
>gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome 10, complete sequence Length = 184346 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 137748 atagagtagagtagagtaga 137767
>gb|AC140291.2| Mus musculus BAC clone RP24-326N12 from chromosome 5, complete sequence Length = 167269 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 59347 atagagtagagtagagtaga 59328
>gb|AC147876.1| Homo sapiens BAC clone RP11-718M20 from 4, complete sequence Length = 119938 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 23526 tagagtagagtagagtagaa 23507
>gb|AY491539.1| Nicotiana tabacum voucher Et4-10 ERT10 (ERT10) mRNA, partial cds Length = 457 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 357 acgttgtgcgggtacccggcgttgttcttgaa 388 |||||||| ||| ||||||| ||||||||||| Sbjct: 277 acgttgtgggggaacccggcattgttcttgaa 246
>gb|AC139350.3| Mus musculus BAC clone RP24-254D18 from chromosome 15, complete sequence Length = 161300 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 40793 aaaacatatacatacatata 40812
>gb|AC141437.4| Mus musculus BAC clone RP23-283O7 from chromosome 19, complete sequence Length = 134644 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ctcctcctgggagatcttgg 315 |||||||||||||||||||| Sbjct: 74230 ctcctcctgggagatcttgg 74211
>emb|CT025613.9| Mouse DNA sequence from clone RP23-208M16 on chromosome 13, complete sequence Length = 166222 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 23400 tagagtagagtagagtagaa 23419 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 23339 atagagtagagtagagtaga 23358
>emb|Z99292.1|SPAC17A2 S.pombe chromosome I cosmid c17A2 Length = 36642 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 27464 atagagtagagtagagtaga 27445
>ref|XM_960955.1| Plasmodium falciparum 3D7 DNA repair protein (rad50) partial mRNA Length = 6711 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 3390 aaaacatatacatacatata 3409
>gb|AC127412.4| Mus musculus BAC clone RP23-234O14 from chromosome 16, complete sequence Length = 225685 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 132178 atagagtagagtagagtaga 132159
>gb|AC108409.8| Mus musculus chromosome 19, clone RP23-84G7, complete sequence Length = 270854 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 237377 tagagtagagtagagtagaa 237396 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 237366 atagagtagagtagagtaga 237385
>gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete sequence Length = 99993 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 97038 aaaacatatacatacatata 97019
>gb|AC160629.6| Medicago truncatula clone mth2-24p23, complete sequence Length = 64145 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 15016 aaaacatatacatacatata 14997
>emb|CR339051.6| Zebrafish DNA sequence from clone DKEY-223N8 in linkage group 7, complete sequence Length = 176851 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 5770 tagagtagagtagagtagaa 5751
>gb|AC147365.4| Medicago truncatula clone mth2-10f9, complete sequence Length = 89850 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 64642 aaaacatatacatacatata 64661
>emb|Z99291.1|HS308I13 Human DNA sequence from clone RP1-308I13 on chromosome 1p35-36.3 Contains part of a novel gene, complete sequence Length = 96608 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 aattaatcaatatgatgcat 125 |||||||||||||||||||| Sbjct: 33672 aattaatcaatatgatgcat 33691
>emb|AL445204.3| Human DNA sequence from clone RP11-232K22 on chromosome 13 Contains the 3' end of a novel gene, complete sequence Length = 129923 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 5659 atagagtagagtagagtaga 5678
>emb|AL355512.22| Human DNA sequence from clone RP11-525A16 on chromosome 10 Contains the DUSP5 gene for dual specificity phosphatase 5 (HVH3), two novel genes, a high-mobility group box 3 (HMGB3) pseudogene and a CpG island, complete sequence Length = 199785 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 agaaaacatatacatacata 97 |||||||||||||||||||| Sbjct: 154751 agaaaacatatacatacata 154770
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tgatggtctcgccggccttg 410 |||||||||||||||||||| Sbjct: 2396531 tgatggtctcgccggccttg 2396512
>emb|AL157780.12| Human DNA sequence from clone RP11-98E22 on chromosome 9q33.1-33.3 Contains a CpG island, complete sequence Length = 160114 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 156139 atagagtagagtagagtaga 156120 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 156069 atagagtagagtagagtaga 156050 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 156063 tagagtagagtagagtagaa 156044
>gb|AC055713.29| Homo sapiens 12 BAC RP11-486O12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 118312 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 38516 atagagtagagtagagtaga 38497
>gb|AC092982.3| Homo sapiens 3q BAC RP11-758I14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189219 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 87671 aaaacatatacatacatata 87652
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 ccggcgttgttcttgaaggtgatg 395 ||||||||||| |||||||||||| Sbjct: 1002199 ccggcgttgttgttgaaggtgatg 1002222
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5 Length = 349418 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 241129 aaaacatatacatacatata 241110
>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland Research Institute) complete sequence Length = 147560 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 83 acatatacatacatatagcgtacaatta 110 ||||||||||||||||| | |||||||| Sbjct: 13447 acatatacatacatataacatacaatta 13474
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gagggcacggcgtcctcgtcgaac 353 ||||||||||||||||||| |||| Sbjct: 60600 gagggcacggcgtcctcgttgaac 60577
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7 Length = 349213 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 218 gtggggctcgcagtagaagccgtaggtgccgg 249 |||||||||||||||| || || ||||||||| Sbjct: 60026 gtggggctcgcagtagtagtcgaaggtgccgg 59995
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gagggcacggcgtcctcgtcgaac 353 ||||||||||||||||||| |||| Sbjct: 96627 gagggcacggcgtcctcgttgaac 96604
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 tgccggggacggtgagggtgacgg 267 ||||||||||||||| |||||||| Sbjct: 231576 tgccggggacggtgacggtgacgg 231553
>emb|AL662936.4|OSJN00137 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052P16, complete sequence Length = 155702 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tagaaaacatatacatacat 96 |||||||||||||||||||| Sbjct: 155299 tagaaaacatatacatacat 155318
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 gaaggtctcgccgggggcgt 288 |||||||||||||||||||| Sbjct: 76984 gaaggtctcgccgggggcgt 76965
>emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chromosome 4, complete sequence Length = 160298 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ttgttcttgaaggtgatggt 397 |||||||||||||||||||| Sbjct: 5632 ttgttcttgaaggtgatggt 5651
>emb|AL844601.4| Mouse DNA sequence from clone RP23-245J22 on chromosome 4, complete sequence Length = 166294 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 12596 atagagtagagtagagtaga 12615
>emb|CR456624.7| Zebrafish DNA sequence from clone CH211-69E5 in linkage group 13, complete sequence Length = 172195 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 acatatacatacatatagcg 102 |||||||||||||||||||| Sbjct: 90561 acatatacatacatatagcg 90542
>gb|AC107909.5| Homo sapiens chromosome 8, clone CTD-2340D6, complete sequence Length = 149001 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 9961 tagagtagagtagagtagaa 9980 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 9910 atagagtagagtagagtaga 9929
>emb|BX470065.7| Zebrafish DNA sequence from clone DKEY-105H11 in linkage group 24, complete sequence Length = 198444 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 142838 aaaacatatacatacatata 142819
>emb|BX465841.9| Zebrafish DNA sequence from clone CH211-198K5 in linkage group 21, complete sequence Length = 83186 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 28704 tagagtagagtagagtagaa 28723 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 28698 atagagtagagtagagtaga 28717 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 28637 tagagtagagtagagtagaa 28656 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 28626 atagagtagagtagagtaga 28645 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 28565 tagagtagagtagagtagaa 28584 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 28554 atagagtagagtagagtaga 28573
>gb|AC104986.5| Homo sapiens chromosome 8, clone RP11-410L14, complete sequence Length = 153411 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 22932 atagagtagagtagagtaga 22913
>gb|DQ450368.1| Uncultured bacterium clone X16 16S ribosomal RNA gene, partial sequence Length = 361 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cggcgtcctcgtcgaacacc 356 |||||||||||||||||||| Sbjct: 86 cggcgtcctcgtcgaacacc 67
>gb|AC026339.23| Homo sapiens 12 BAC RP11-109A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55087 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 38079 tagagtagagtagagtagaa 38098 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 38038 atagagtagagtagagtaga 38057
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 ttcttgaaggtgatggtctcgccg 404 ||||||||||||||||||| |||| Sbjct: 1631031 ttcttgaaggtgatggtcttgccg 1631008
>gb|AC097513.2| Homo sapiens BAC clone RP11-419E3 from 4, complete sequence Length = 151389 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gaaaacatatacatacatat 98 |||||||||||||||||||| Sbjct: 75068 gaaaacatatacatacatat 75049
>gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromosome ul, complete sequence Length = 212965 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 159814 atagagtagagtagagtaga 159833
>gb|AC009309.4| Homo sapiens BAC clone RP11-301O19 from 2, complete sequence Length = 170720 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 162465 atagagtagagtagagtaga 162484
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 cccgcccagcagcatggcgc 505 |||||||||||||||||||| Sbjct: 3039775 cccgcccagcagcatggcgc 3039756
>gb|AC177806.2| Gallus gallus BAC clone CH261-13L12 from chromosome ul, complete sequence Length = 250495 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 89035 atagagtagagtagagtaga 89054
>emb|AL844155.6| Mouse DNA sequence from clone RP23-163L4 on chromosome 2, complete sequence Length = 193188 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 38936 tagagtagagtagagtagaa 38955 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 38885 atagagtagagtagagtaga 38904
>emb|BX936465.15| Zebrafish DNA sequence from clone CH211-95J16 in linkage group 18, complete sequence Length = 116706 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 4696 aaaacatatacatacatata 4677
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 488 cgcccagcagcatggcgccggcggccatggcc 519 |||||||||||| |||| ||||||||| |||| Sbjct: 1408617 cgcccagcagcacggcgtcggcggccagggcc 1408586
>gb|AC124805.3| Branchiostoma floridae, clone -25B24, complete sequence Length = 67731 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 41227 atagagtagagtagagtaga 41208
>gb|AC160392.2| Mus musculus BAC clone RP23-240E9 from chromosome 9, complete sequence Length = 199695 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 68989 tagagtagagtagagtagaa 69008
>dbj|AK036340.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630059E20 product:unclassifiable, full insert sequence Length = 4703 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 2965 tagagtagagtagagtagaa 2984
>gb|AC009110.10| Homo sapiens chromosome 16 clone RP11-467O15, complete sequence Length = 188763 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 95813 atagagtagagtagagtaga 95794
>gb|AC007351.40|AC007351 Homo sapiens 12 BAC RP11-492N15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195501 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 101933 tagagtagagtagagtagaa 101952
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gttcttgaaggtgatggtct 399 |||||||||||||||||||| Sbjct: 4353248 gttcttgaaggtgatggtct 4353267
>gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, region 37D, BAC clone BACR28G24, complete sequence Length = 171375 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gaaaacatatacatacatat 98 |||||||||||||||||||| Sbjct: 57041 gaaaacatatacatacatat 57060
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tagaaaacatatacatacat 96 |||||||||||||||||||| Sbjct: 5454650 tagaaaacatatacatacat 5454669
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tggcgccggcggccatggcc 519 |||||||||||||||||||| Sbjct: 27885698 tggcgccggcggccatggcc 27885679
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 491 ccagcagcatggcgccggcggccatggc 518 ||||| ||||||||||| |||||||||| Sbjct: 4826435 ccagcggcatggcgccgccggccatggc 4826408
>gb|AC048340.24| Homo sapiens 12 BAC RP11-469A24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 76354 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 44156 atagagtagagtagagtaga 44137
>gb|AC157523.2| Pan troglodytes BAC clone CH251-526G6 from chromosome unknown, complete sequence Length = 165776 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 63737 atagagtagagtagagtaga 63718 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 63701 tagagtagagtagagtagaa 63682
>gb|AC022415.5|AC022415 Homo sapiens chromosome 19 clone CTC-359D24, complete sequence Length = 180510 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 119837 tagagtagagtagagtagaa 119818
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 gtcgttgggctcgaacacca 438 |||||||||||||||||||| Sbjct: 454478 gtcgttgggctcgaacacca 454459
>gb|AC013354.6|AC013354 Genomic sequence for Arabidopsis thaliana BAC F15H18 from chromosome I, complete sequence Length = 95327 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 79913 atagagtagagtagagtaga 79932
>gb|AC104201.12| Mus musculus chromosome 19, clone RP24-531I1, complete sequence Length = 166165 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 28530 tagagtagagtagagtagaa 28549 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 28519 atagagtagagtagagtaga 28538
>gb|AC129949.4| Branchiostoma floridae, clone -25H14, complete sequence Length = 71462 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 8988 atagagtagagtagagtaga 9007
>gb|AC096554.1| Homo sapiens BAC clone RP11-76I14 from 2, complete sequence Length = 144683 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 112807 atagagtagagtagagtaga 112788 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 112771 tagagtagagtagagtagaa 112752
>gb|AC084288.9| Mus musculus Strain C57BL6/J Chromosome 2 BAC, RP23-108H5, complete sequence Length = 200393 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 47327 atagagtagagtagagtaga 47308 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 47276 tagagtagagtagagtagaa 47257
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cggcgtcctcgtcgaacacc 356 |||||||||||||||||||| Sbjct: 55212 cggcgtcctcgtcgaacacc 55231
>gb|AC108857.13| Mus musculus chromosome 1, clone RP24-389A10, complete sequence Length = 190617 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 34997 atagagtagagtagagtaga 34978
>gb|AC135388.2| Homo sapiens 12 BAC RP11-474D1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85801 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 17063 atagagtagagtagagtaga 17044 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 17017 tagagtagagtagagtagaa 16998
>gb|AC069551.4|AC069551 Genomic sequence for Arabidopsis thaliana BAC T10O22 from chromosome I, complete sequence Length = 92948 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 88093 atagagtagagtagagtaga 88074
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 491 ccagcagcatggcgccggcggccatggc 518 ||||| ||||||||||| |||||||||| Sbjct: 107025 ccagcggcatggcgccgccggccatggc 106998
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 491 ccagcagcatggcgccggcggccatggc 518 ||||| ||||||||||| |||||||||| Sbjct: 68594 ccagcggcatggcgccgccggccatggc 68567
>dbj|AB006038.1| Cyprinus carpio cERK1 mRNA for extracellular signal regulated protein kinase 1, complete cds Length = 1539 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 1514 aaaacatatacatacatata 1533
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tggcgccggcggccatggcc 519 |||||||||||||||||||| Sbjct: 93776 tggcgccggcggccatggcc 93757
>emb|Z50185.1|PNPCAMR P.nigra mRNA for plastocyanin a Length = 721 Score = 40.1 bits (20), Expect = 7.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 342 tcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaag 389 ||||||||||| || | |||||| ||| | ||||| |||||||||||| Sbjct: 381 tcctcgtcgaagacaatgttgtgtgggaatccggcattgttcttgaag 334
>gb|AF114235.1|AF114235 Scenedesmus obliquus plastocyanin (Pcy) gene, Pcy-1 allele, complete cds Length = 3736 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 190 tgacctttccgaccatgccggccccagcgtggggctcgca 229 ||||||| |||||||||||||| || |||||||||||| Sbjct: 3161 tgaccttgccgaccatgccggcgccctggtggggctcgca 3122
>emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in linkage group 10, complete sequence Length = 202134 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 aattaatcaatatgatgcat 125 |||||||||||||||||||| Sbjct: 88416 aattaatcaatatgatgcat 88397
>emb|BX927197.7| Zebrafish DNA sequence from clone DKEY-28F16 in linkage group 18, complete sequence Length = 70511 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 3637 aaaacatatacatacatata 3618
>dbj|AK060067.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H07, full insert sequence Length = 1139 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tggcgccggcggccatggcc 519 |||||||||||||||||||| Sbjct: 99 tggcgccggcggccatggcc 118
>emb|AL135928.6| Human DNA sequence from clone RP4-534P7 on chromosome 1 Contains the 5' end of a gene for a beta 1,3-N-acetylgalactosaminyltransferase-II (MGC39558) protein and a mitochondrial cytochrome b (MTCYB) pocessed pseudogene, complete sequence Length = 82939 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 73003 aaaacatatacatacatata 73022
>gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71 of 83 of the complete sequence Length = 266205 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gaaaacatatacatacatat 98 |||||||||||||||||||| Sbjct: 188613 gaaaacatatacatacatat 188632
>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete sequence Length = 291923 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aaacatatacatacatatag 100 |||||||||||||||||||| Sbjct: 56101 aaacatatacatacatatag 56082
>dbj|AP004835.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-629D8, complete sequence Length = 134743 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 129596 tagagtagagtagagtagaa 129615
>gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, region 50A2-50A3, P1 clones DS08976 and DS01149, complete sequence Length = 129605 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aaacatatacatacatatag 100 |||||||||||||||||||| Sbjct: 96957 aaacatatacatacatatag 96938
>dbj|AP002778.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-643C11, complete sequence Length = 160242 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 11889 tagagtagagtagagtagaa 11908
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 aagagcctcatcgatcttat 62 |||||||||||||||||||| Sbjct: 1855650 aagagcctcatcgatcttat 1855669
>gb|AC150407.2| Branchiostoma floridae clone CH302-54J24, complete sequence Length = 175896 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 61321 atagagtagagtagagtaga 61340
>emb|BX901974.11| Zebrafish DNA sequence from clone DKEY-30F3 in linkage group 3, complete sequence Length = 192650 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 123034 aaaacatatacatacatata 123053
>gb|AC150390.2| Branchiostoma floridae clone CH302-115N8, complete sequence Length = 230518 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 agagtagagtagagtagaaa 82 |||||||||||||||||||| Sbjct: 157611 agagtagagtagagtagaaa 157630 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 137891 atagagtagagtagagtaga 137910
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01, complete sequence Length = 150283 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tagaaaacatatacatacat 96 |||||||||||||||||||| Sbjct: 9280 tagaaaacatatacatacat 9299
>emb|BX000989.10| Mouse DNA sequence from clone RP23-33D17 on chromosome 4, complete sequence Length = 236166 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 183200 tagagtagagtagagtagaa 183219 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 183179 atagagtagagtagagtaga 183198
>gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from clone y126 Length = 37164 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gagggcacggcgtcctcgtcgaac 353 ||||||||||||||||||| |||| Sbjct: 13981 gagggcacggcgtcctcgttgaac 13958
>emb|AL731697.16| Mouse DNA sequence from clone RP23-188L7 on chromosome X, complete sequence Length = 200250 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 121389 atagagtagagtagagtaga 121408
>emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chromosome 2, complete sequence Length = 167978 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 72130 aaaacatatacatacatata 72111
>emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chromosome 4, complete sequence Length = 199565 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 21629 aaaacatatacatacatata 21610
>emb|AL806522.4| Mouse DNA sequence from clone RP23-167H2 on chromosome 2, complete sequence Length = 189104 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 128621 tagagtagagtagagtagaa 128602
>gb|AC138594.10| Mus musculus chromosome 7, clone RP24-283N22, complete sequence Length = 167184 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaaacatatacatacatata 99 |||||||||||||||||||| Sbjct: 99139 aaaacatatacatacatata 99158
>dbj|AP004294.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1651H12 Length = 180236 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tagagtagagtagagtagaa 81 |||||||||||||||||||| Sbjct: 47987 tagagtagagtagagtagaa 48006 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atagagtagagtagagtaga 80 |||||||||||||||||||| Sbjct: 47946 atagagtagagtagagtaga 47965
>dbj|AP004369.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-448P19, complete sequences Length = 158310 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 agaaaacatatacatacata 97 |||||||||||||||||||| Sbjct: 81417 agaaaacatatacatacata 81398 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,939,201 Number of Sequences: 3902068 Number of extensions: 3939201 Number of successful extensions: 123063 Number of sequences better than 10.0: 165 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120785 Number of HSP's gapped (non-prelim): 2224 length of query: 529 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 506 effective length of database: 17,143,297,704 effective search space: 8674508638224 effective search space used: 8674508638224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)