ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14k05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4) 44 2e-04
2ALX1_CAEEL (P34552) Apoptosis-linked gene 2-interacting protein ... 36 0.087
3HID_DROME (Q24106) Cell death protein W (Protein head involution... 35 0.15
4GDBX_WHEAT (P21292) Gamma-gliadin precursor 33 0.56
5LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alterna... 33 0.56
6SPT5H_PONPY (Q5R405) Transcription elongation factor SPT5 (DRB s... 33 0.73
7SPT5H_HUMAN (O00267) Transcription elongation factor SPT5 (hSPT5... 33 0.73
8SPT5H_MOUSE (O55201) Transcription elongation factor SPT5 (DRB s... 33 0.73
9LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alterna... 32 0.96
10CHS2_EXODE (P30601) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP ... 32 0.96
11SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouc... 32 1.3
12PKP4_HUMAN (Q99569) Plakophilin-4 (p0071) 32 1.6
13EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear a... 32 1.6
14SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB s... 31 2.1
15MYLK2_HUMAN (Q9H1R3) Myosin light chain kinase 2, skeletal/cardi... 31 2.1
16STUA_EMENI (P36011) Cell pattern formation-associated protein stuA 31 2.1
17K0853_HUMAN (Q5T200) Protein KIAA0853 31 2.1
18AMOL1_HUMAN (Q8IY63) Angiomotin-like protein 1 31 2.1
19SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB) (He... 31 2.1
20SPT5H_CHICK (Q5ZI08) Transcription elongation factor SPT5 (DRB s... 31 2.8
21ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog 31 2.8
22PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3... 31 2.8
23CASC3_MOUSE (Q8K3W3) Protein CASC3 (Cancer susceptibility candid... 31 2.8
24ZYX_MOUSE (Q62523) Zyxin 31 2.8
25PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presyna... 30 3.6
26FOXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related ... 30 3.6
27YWIS_WHEAT (P14723) Hypothetical 16 kDa protein in middle repeti... 30 4.8
28IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2 30 4.8
29AMOL1_MOUSE (Q9D4H4) Angiomotin-like protein 1 30 6.2
30OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid) 29 8.1
31ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog 29 8.1
32PDCD7_MOUSE (Q9WTY1) Programmed cell death protein 7 (ES18) 29 8.1
33EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline... 29 8.1
34EFP_NOCFA (Q5YTL1) Elongation factor P (EF-P) 29 8.1

>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)|
          Length = 309

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
 Frame = -1

Query: 567 AADRSLSPAXEHAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSV 388
           +A  S S    H H    P   P P    H A PG ++  Y P P      R++PGY + 
Sbjct: 29  SAGSSASYHPHHPHPHAPPPPPPPPPPHLHAAHPGPALPEYFPRP------RREPGYQAP 82

Query: 387 MXPRHPXTAPQQ----QWSPSYLYMPYPHASPES 298
             P  P   P +      +PSY   PY ++S  S
Sbjct: 83  AAPPGPPGPPPEALYPAQAPSYPQAPYSYSSAGS 116



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>ALX1_CAEEL (P34552) Apoptosis-linked gene 2-interacting protein X 1 (Protein|
           pqn-58) (Protein YNK1)
          Length = 882

 Score = 35.8 bits (81), Expect = 0.087
 Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 3/82 (3%)
 Frame = -1

Query: 516 SPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQQQW--- 346
           SP NAP        A P  SV    P P    +M+  PG      P      PQ Q    
Sbjct: 749 SPANAPPRPPPPRPAAP--SVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQ 806

Query: 345 SPSYLYMPYPHASPESYYQDYY 280
            P Y   P P+  P+  +Q  Y
Sbjct: 807 HPGYYQQPMPYGQPQPMFQPQY 828



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>HID_DROME (Q24106) Cell death protein W (Protein head involution defective)|
           (Protein wrinkled)
          Length = 410

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -1

Query: 519 FSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQP-GYSSVMXPRHPXTAPQQQWS 343
           F P+  P P  + H   P TSVS ++   E  +  +QQP  + S   P  P   P Q   
Sbjct: 132 FFPHGHPNPNSNPHPRTPRTSVS-FSSGEEYNFFRQQQPQPHPSYPAPSTPQPMPPQSAP 190

Query: 342 PSYLYMPYPHAS 307
           P +    YP  S
Sbjct: 191 PMHCSHSYPQQS 202



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>GDBX_WHEAT (P21292) Gamma-gliadin precursor|
          Length = 302

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 19/71 (26%), Positives = 30/71 (42%)
 Frame = -1

Query: 501 PQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMP 322
           PQP  ++H     T      P P+Q Y  + Q  +     P+ P   PQQ + P    +P
Sbjct: 53  PQPHQTFHHQPQQT-----FPQPQQTYPHQPQQQFPQTQQPQQPFPQPQQTF-PQQPQLP 106

Query: 321 YPHASPESYYQ 289
           +P    + + Q
Sbjct: 107 FPQQPQQPFPQ 117



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>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced|
           PDZ-motif protein) (Protein cypher) (Protein oracle)
          Length = 723

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = -1

Query: 567 AADRSLSPAXEHAHQEFSPYNAPQP-VMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSS 391
           AA  S +P+   ++ E     AP+P V++  + +P    S Y P P   Y+    PG + 
Sbjct: 367 AAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRP----SVYQPVPASSYS--PSPGANY 420

Query: 390 VMXPRHPXTAPQQQWSPSYLYMPYP 316
              P  P  AP    SP+  Y P P
Sbjct: 421 SPTPYTPSPAPAYTPSPAPTYTPSP 445



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>SPT5H_PONPY (Q5R405) Transcription elongation factor SPT5 (DRB|
            sensitivity-inducing factor large subunit) (DSIF large
            subunit)
          Length = 1083

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
 Frame = -1

Query: 522  EFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPR--HPXTAPQ-Q 352
            +FSPY AP P  SY  +    S    AP P          GY +   P   HP  +P   
Sbjct: 885  QFSPYAAPSPQGSYQPSPSPQSYHQVAPSP---------AGYQNTHSPASYHPTPSPMAY 935

Query: 351  QWSPSYLYMPYPHASP 304
            Q SPS   + Y   +P
Sbjct: 936  QASPSPSPVGYSPMTP 951



 Score = 29.6 bits (65), Expect = 6.2
 Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
 Frame = -1

Query: 561  DRSLSPAXEHAHQEFSPYNAPQPVMSYHTA---QPGTSVSXYAPXPEQGYTMRQQPGYSS 391
            D S +PA   A    +P    +    Y  A   +P  S   Y   P       Q PGY  
Sbjct: 806  DGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNP-----QTPGYPD 860

Query: 390  VMXPR-HPXTAPQQQWSPSYL----YMPYPHASPESYYQ 289
               P+ +P   PQ   +P+      + PY   SP+  YQ
Sbjct: 861  PSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQ 899



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>SPT5H_HUMAN (O00267) Transcription elongation factor SPT5 (hSPT5) (DRB|
            sensitivity-inducing factor large subunit) (DSIF large
            subunit) (DSIF p160) (Tat-cotransactivator 1 protein)
            (Tat-CT1 protein)
          Length = 1087

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
 Frame = -1

Query: 522  EFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPR--HPXTAPQ-Q 352
            +FSPY AP P  SY  +    S    AP P          GY +   P   HP  +P   
Sbjct: 889  QFSPYAAPSPQGSYQPSPSPQSYHQVAPSP---------AGYQNTHSPASYHPTPSPMAY 939

Query: 351  QWSPSYLYMPYPHASP 304
            Q SPS   + Y   +P
Sbjct: 940  QASPSPSPVGYSPMTP 955



 Score = 29.6 bits (65), Expect = 6.2
 Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
 Frame = -1

Query: 561  DRSLSPAXEHAHQEFSPYNAPQPVMSYHTA---QPGTSVSXYAPXPEQGYTMRQQPGYSS 391
            D S +PA   A    +P    +    Y  A   +P  S   Y   P       Q PGY  
Sbjct: 810  DGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNP-----QTPGYPD 864

Query: 390  VMXPR-HPXTAPQQQWSPSYL----YMPYPHASPESYYQ 289
               P+ +P   PQ   +P+      + PY   SP+  YQ
Sbjct: 865  PSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQ 903



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>SPT5H_MOUSE (O55201) Transcription elongation factor SPT5 (DRB|
            sensitivity-inducing factor large subunit) (DSIF large
            subunit)
          Length = 1082

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
 Frame = -1

Query: 522  EFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPR--HPXTAPQ-Q 352
            +FSPY AP P  SY  +    S    AP P          GY +   P   HP  +P   
Sbjct: 883  QFSPYAAPSPQGSYQPSPSPQSYHQVAPSP---------AGYQNTHSPASYHPTPSPMAY 933

Query: 351  QWSPSYLYMPYPHASP 304
            Q SPS   + Y   +P
Sbjct: 934  QASPSPSPVGYSPMTP 949



 Score = 29.6 bits (65), Expect = 6.2
 Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
 Frame = -1

Query: 561  DRSLSPAXEHAHQEFSPYNAPQPVMSYHTA---QPGTSVSXYAPXPEQGYTMRQQPGYSS 391
            D S +PA   A    +P    +    Y  A   +P  S   Y   P       Q PGY  
Sbjct: 804  DGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNP-----QTPGYPD 858

Query: 390  VMXPR-HPXTAPQQQWSPSYL----YMPYPHASPESYYQ 289
               P+ +P   PQ   +P+      + PY   SP+  YQ
Sbjct: 859  PSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQ 897



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>LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alternatively spliced|
           PDZ-motif protein) (Protein cypher)
          Length = 727

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = -1

Query: 567 AADRSLSPAXEHAHQEFSPYNAPQP-VMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSS 391
           A   S +PA   ++ E     AP+P V++  + +P    S Y P P   Y+    PG + 
Sbjct: 371 AVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRP----SVYQPVPASTYS--PSPGANY 424

Query: 390 VMXPRHPXTAPQQQWSPSYLYMPYP 316
              P  P  AP    SP+  Y P P
Sbjct: 425 SPTPYTPSPAPAYTPSPAPAYTPSP 449



 Score = 30.4 bits (67), Expect = 3.6
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = -1

Query: 567 AADRSLSPAXEHAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYS 394
           A+  S SP   ++   ++P  AP    S   A   + V  Y P P   YT    P Y+
Sbjct: 413 ASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYN 470



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>CHS2_EXODE (P30601) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 2) (Class-I chitin
           synthase 2)
          Length = 928

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 17/55 (30%), Positives = 21/55 (38%)
 Frame = -1

Query: 447 YAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMPYPHASPESYYQDY 283
           Y+P P+  Y +   P +     P  P T       P   Y P PH  P   Y DY
Sbjct: 116 YSPHPQGDYALDPYPSHDE---PYRPDTDNVPILQPDSAYGPDPHTQPGMDYDDY 167



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>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox|
           protein NK-1)
          Length = 659

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/69 (28%), Positives = 24/69 (34%)
 Frame = -1

Query: 546 PAXEHAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPX 367
           PA  H+HQ   P+  P P        P  S   +   P    T    P  S +  P  P 
Sbjct: 213 PAHPHSHQHPHPHPHPHP-------HPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPA 265

Query: 366 TAPQQQWSP 340
               QQ SP
Sbjct: 266 MHSDQQMSP 274



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>PKP4_HUMAN (Q99569) Plakophilin-4 (p0071)|
          Length = 1211

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
 Frame = -1

Query: 555  SLSPAXEHAHQEFSPYNAPQPVMSYHTAQ---------PGTS------VSXY-APXPEQG 424
            S SPA        S Y+  QP M Y+ +Q         PG+S      +S Y +P  EQ 
Sbjct: 1047 SSSPALLGIRDPRSEYDRTQPPMQYYNSQGDATHKGLYPGSSKPSPIYISSYSSPAREQN 1106

Query: 423  YTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMPYPHASPESYYQD 286
              ++ Q  Y S         + ++ +    LY+  PH+  + Y+ D
Sbjct: 1107 RRLQHQQLYYS------QDDSNRKNFDAYRLYLQSPHSYEDPYFDD 1146



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>EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear antigen 6)|
           (EBNA-6) (EBNA-3C) (EBNA-4B)
          Length = 992

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
 Frame = -1

Query: 561 DRSLSPAXEHAHQEFSPYNAPQ-PVMSYHTAQPGTS-VSXYAPXPEQGYTMRQQPGYSSV 388
           D +  PA +  +Q +    APQ P   Y    P  +    Y   P  G      PGY+  
Sbjct: 736 DVAAQPAPQAPYQGYQEPPAPQAPYQGYQEPPPPQAPYQGYQEPPAHGLQSSSYPGYAGP 795

Query: 387 MXPRHPXTAPQQQWSP 340
             PR      +  W+P
Sbjct: 796 WTPRSQHPCYRHPWAP 811



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>SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB|
            sensitivity-inducing factor large subunit) (DSIF large
            subunit) (Protein foggy)
          Length = 1084

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
 Frame = -1

Query: 522  EFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPR--HPXTAPQ-Q 352
            ++SPY AP P  SY  +    S    AP P          GY +   P   HP  +P   
Sbjct: 887  QYSPYAAPSPQGSYQPSPSPQSYHQVAPSP---------VGYQNTHSPASYHPTPSPMAY 937

Query: 351  QWSPSYLYMPYPHASP 304
            Q SPS   + Y   +P
Sbjct: 938  QASPSPSPVGYSPMTP 953



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>MYLK2_HUMAN (Q9H1R3) Myosin light chain kinase 2, skeletal/cardiac muscle (EC|
           2.7.11.18) (MLCK2)
          Length = 595

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = -1

Query: 501 PQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMP 322
           P   +   TA P TSV    P  EQG +  Q PG   V        A  ++ SP++L+ P
Sbjct: 92  PPAALPQQTATPETSVKK--PKAEQGASGSQDPGKPRVGKKAAEGQAAARRGSPAFLHSP 149



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>STUA_EMENI (P36011) Cell pattern formation-associated protein stuA|
          Length = 622

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = -1

Query: 486 SYHTAQPGTSVSXYAPXPEQ---GYTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMPYP 316
           SY+T  P  SV   A    Q     T   Q   S  M PR   TAPQ  W+P Y   P P
Sbjct: 463 SYYTTNP--SVGGLAHDHSQLTPDMTGSPQQNGSGRMTPRTSNTAPQ--WAPGYTTPPRP 518

Query: 315 HASPESY 295
            A+   Y
Sbjct: 519 AAASSLY 525



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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 13/86 (15%)
 Frame = -1

Query: 558 RSLSPAXEHAHQEFSPYNAPQPVMSYH---TAQPGTSVSXYAPXPEQGYTMRQQPGYSSV 388
           RS SPA +H            P+ S H   ++Q G+S+  ++P P +  T    P Y   
Sbjct: 315 RSTSPAGQHH----------SPISSRHHSSSSQSGSSIQRHSPSPRRKRT--PSPSYQRT 362

Query: 387 MXP----------RHPXTAPQQQWSP 340
           + P           H  ++PQ++ SP
Sbjct: 363 LTPPLRRSASPYPSHSLSSPQRKQSP 388



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>AMOL1_HUMAN (Q8IY63) Angiomotin-like protein 1|
          Length = 956

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -1

Query: 528 HQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQ-QPGYSSVMXPRHPXTA 361
           H+   PY APQPV      +   +V  Y P PE G T R  Q  + S M    P ++
Sbjct: 343 HEMVKPYPAPQPV------RTDVAVLRYQPPPEYGVTSRPCQLPFPSTMQQHSPMSS 393



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>SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 238

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = -1

Query: 531 AHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMR-QQPGYSSVMXP-RHPXTAP 358
           A Q  S YN P    SY   Q    V  +A   + GY  +   P Y +   P + P   P
Sbjct: 161 APQPQSGYNQPPAQQSYGQQQAQPHVQPHAQPQQGGYAPKPAAPAYQAPAAPAQRPAPQP 220

Query: 357 QQQWSP 340
           QQ ++P
Sbjct: 221 QQNFTP 226



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>SPT5H_CHICK (Q5ZI08) Transcription elongation factor SPT5 (DRB|
            sensitivity-inducing factor large subunit) (DSIF large
            subunit)
          Length = 1079

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
 Frame = -1

Query: 522  EFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPR--HPXTAPQ-Q 352
            +FSPY  P P  SY  +    S    AP P          GY +   P   HP  +P   
Sbjct: 881  QFSPYAVPSPQGSYQPSPSPQSYHQVAPSP---------VGYQNTHSPASYHPTPSPMAY 931

Query: 351  QWSPSYLYMPYPHASP 304
            Q SPS   + Y   +P
Sbjct: 932  QASPSPSPVGYSPMTP 947



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>ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog|
          Length = 332

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 24/92 (26%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
 Frame = -1

Query: 567 AADRSLSPAXEHAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSV 388
           A+ +   P  +    +  P +AP+P       Q       Y P PEQ       P  +S 
Sbjct: 97  ASAQPRQPVQQPPEAQVPPQHAPRPTQP---VQQPVQQPAYQPQPEQPLQQPVSPQVASA 153

Query: 387 MXPRHPXTAPQQQ----WSPSYLYMPYPHASP 304
             P H    P QQ      P     P P A P
Sbjct: 154 PQPVHSAPQPAQQAFQPAEPVAAPQPEPVAEP 185



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>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin|
            cytoplasmic domain-associated protein 3) (SEMACAP3
            protein)
          Length = 1063

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
 Frame = -1

Query: 477  TAQPGTSVSXYAPX-----PEQGYTMRQQPGYSSVMXPRHPXTAPQ--QQWSPSYLYMPY 319
            T  P  S   Y P      P Q   ++++ G       R P  +P+    + PSY + PY
Sbjct: 809  TEDPEVSTPSYNPSAKELDPSQALEIKERRGSDG---SRSPTASPKLGNAYLPSYHHSPY 865

Query: 318  PHASPESYYQDYYS 277
             HA   ++ Q Y S
Sbjct: 866  KHAHIPAHAQHYQS 879



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>CASC3_MOUSE (Q8K3W3) Protein CASC3 (Cancer susceptibility candidate gene 3|
           protein homolog) (Metastatic lymph node protein 51
           homolog) (MLN 51 protein homolog) (Barentsz protein)
           (Btz)
          Length = 697

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
 Frame = -1

Query: 552 LSPAXEHAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQ--GYTMRQQPGYSSVMXP 379
           + P     H    P+ +P P+ +     P  S+S   P P+Q    T    PG  +   P
Sbjct: 569 VQPEMHLPHPGLHPHQSPGPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNP 628

Query: 378 RHPXTAPQQQWSPSYLYMPYPHASPESY 295
            +P         P +LY P   A P+ Y
Sbjct: 629 NYPYAPGALPPPPPHLY-PNTQAPPQVY 655



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>ZYX_MOUSE (Q62523) Zyxin|
          Length = 564

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -1

Query: 501 PQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQQ 352
           PQP+  +    P +SVS  +P P   +T  QQ     V   +HP   P Q
Sbjct: 281 PQPIKKWCLRMPPSSVSTGSPQP-PSFTYAQQKEKPLVQEKQHPQPPPAQ 329



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>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
           cytomatrix protein)
          Length = 5085

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = -1

Query: 558 RSLSPAXEHAHQEFSPYNAP--QPVMSYHTAQ-PGTSVSXYAPXPEQGYTMRQQPGYSSV 388
           +SL+    H      P  +P  QP  + H AQ PG   +   P P +    +  PG +  
Sbjct: 328 KSLAQTPGHGKFPLGPVKSPAQQPGTAKHPAQQPGPQTAAKVPGPTKTPAQQSGPGKTPA 387

Query: 387 MXPRHPXTAPQQ 352
             P     +PQQ
Sbjct: 388 QQPGPTKPSPQQ 399



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>FOXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related protein FKHL2)|
           (Transcription factor BF-2) (Brain factor 2) (BF2)
           (HFK2)
          Length = 469

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 20/62 (32%), Positives = 24/62 (38%)
 Frame = -1

Query: 534 HAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQ 355
           H H    P  APQP       QP        P P +G   R++ G SS     H   AP+
Sbjct: 52  HHHHHHPPPPAPQPPPPPQQQQP-------PPPPRRGARRRRRRGPSSCCSAAHAHGAPE 104

Query: 354 QQ 349
            Q
Sbjct: 105 GQ 106



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>YWIS_WHEAT (P14723) Hypothetical 16 kDa protein in middle repetitive insertion|
           sequence WIS1
          Length = 151

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
 Frame = -1

Query: 507 NAPQPVMSYHTAQPGTSVSXYAPXPE-QGYTMRQQPGYSSVMXPRH-------PXTAPQQ 352
           +AP P+ + H   P  S+S  AP P+ +  +       + V  P H       P   P  
Sbjct: 10  SAPLPLSAAHILLPSPSLSSPAPSPQLRSLSCTTSAAATPVPVPHHCLRCCDPPPPPPPP 69

Query: 351 QWSPSYLYMPYP 316
             SPS   +P+P
Sbjct: 70  TPSPSISLLPFP 81



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>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2|
          Length = 954

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -3

Query: 280 QPAGDARAATTSGAAPGLVSPARRREPQLV--QRHVIFSPTRTAYGTARLRLATGGR 116
           +PA  +  A+TS +AP   +PAR+  P     Q     +PT    G AR  + T GR
Sbjct: 66  RPAAPSAPASTSSSAPTPAAPARQASPASAHQQAPTPGAPTPRPQGGARPGMPTPGR 122



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>AMOL1_MOUSE (Q9D4H4) Angiomotin-like protein 1|
          Length = 882

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -1

Query: 528 HQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMR 412
           H+   PY APQP      A+   +V  Y P PE G T R
Sbjct: 269 HEMVKPYPAPQP------ARTEVAVLRYQPPPEYGVTSR 301



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>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 21/84 (25%), Positives = 27/84 (32%), Gaps = 15/84 (17%)
 Frame = -1

Query: 510 YNAPQPVMSYHTAQP-----GTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTA----- 361
           Y  P P  +     P     G +   Y   P+Q    +QQ    +   P  P        
Sbjct: 300 YRTPPPTNTSRGQSPYPPAHGQNSGSYPSSPQQQQQQQQQQQQQAGQQPGGPVPGGPPPG 359

Query: 360 -----PQQQWSPSYLYMPYPHASP 304
                PQQ   P+  Y PYP   P
Sbjct: 360 TGQQPPQQNTPPTSQYSPYPQRYP 383



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>ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog|
          Length = 327

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 26/92 (28%), Positives = 29/92 (31%), Gaps = 17/92 (18%)
 Frame = -1

Query: 528 HQEFSPYNAPQP-----------VMSYHTAQPGTSVS--XYAPXPEQGYTMRQQPGYSSV 388
           HQ   PY + QP           V   H  +P   V    Y P PEQ       P  +  
Sbjct: 89  HQYLPPYASAQPRQPVQQPPEAQVPPQHAPRPAQPVQQPAYQPQPEQPLQQPVSPQVAPA 148

Query: 387 MXPRHPXTAPQQQ----WSPSYLYMPYPHASP 304
             P H    P QQ      P     P P A P
Sbjct: 149 PQPVHSAPQPAQQAFQPAEPVAAPQPEPVAEP 180



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>PDCD7_MOUSE (Q9WTY1) Programmed cell death protein 7 (ES18)|
          Length = 482

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = -1

Query: 441 PXPEQGYTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMPYP 316
           P P      R  PG  +V  PR P   P   WSP +   P P
Sbjct: 87  PLPPPPPQCRPFPGPDAVERPRPPPPGPGPPWSPRWAEAPPP 128



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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 25/97 (25%), Positives = 31/97 (31%), Gaps = 11/97 (11%)
 Frame = -1

Query: 558 RSLSPAXEHAHQEFSPYNAPQPVMSY-----------HTAQPGTSVSXYAPXPEQGYTMR 412
           R  SP   H H     Y  P P   Y           ++  P T V      P +G+  +
Sbjct: 167 RRPSPPSRHGHPPPPTYAQPPPTPIYSPSPQVQPPPTYSPPPPTHVQPTPSPPSRGH--Q 224

Query: 411 QQPGYSSVMXPRHPXTAPQQQWSPSYLYMPYPHASPE 301
            QP       P H    P  Q SP     P P   P+
Sbjct: 225 PQPPTHRHAPPTHRHAPPTHQPSPLRHLPPSPRRQPQ 261



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>EFP_NOCFA (Q5YTL1) Elongation factor P (EF-P)|
          Length = 187

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = -3

Query: 256 ATTSGAAPGLVSPARRREPQLVQRHVIFSPTRTAYGTARLRLATGGRVAKKT--AS*YIE 83
           A TS    GLV     +  Q+V+   +      A+   +L+    G++  KT  A   +E
Sbjct: 2   ADTSDFKNGLVLKIDGQLQQIVEFQHVKPGKGPAFVRTKLKNVVSGKIVDKTFNAGVKVE 61

Query: 82  TSXVVARVACYLFHD 38
           T+ V  R   YL+HD
Sbjct: 62  TATVDRRDMTYLYHD 76


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,654,411
Number of Sequences: 219361
Number of extensions: 1075952
Number of successful extensions: 4091
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3990
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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