Clone Name | rbasd14k05 |
---|---|
Clone Library Name | barley_pub |
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 44.3 bits (103), Expect = 2e-04 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 4/94 (4%) Frame = -1 Query: 567 AADRSLSPAXEHAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSV 388 +A S S H H P P P H A PG ++ Y P P R++PGY + Sbjct: 29 SAGSSASYHPHHPHPHAPPPPPPPPPPHLHAAHPGPALPEYFPRP------RREPGYQAP 82 Query: 387 MXPRHPXTAPQQ----QWSPSYLYMPYPHASPES 298 P P P + +PSY PY ++S S Sbjct: 83 AAPPGPPGPPPEALYPAQAPSYPQAPYSYSSAGS 116
>ALX1_CAEEL (P34552) Apoptosis-linked gene 2-interacting protein X 1 (Protein| pqn-58) (Protein YNK1) Length = 882 Score = 35.8 bits (81), Expect = 0.087 Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Frame = -1 Query: 516 SPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQQQW--- 346 SP NAP A P SV P P +M+ PG P PQ Q Sbjct: 749 SPANAPPRPPPPRPAAP--SVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQ 806 Query: 345 SPSYLYMPYPHASPESYYQDYY 280 P Y P P+ P+ +Q Y Sbjct: 807 HPGYYQQPMPYGQPQPMFQPQY 828
>HID_DROME (Q24106) Cell death protein W (Protein head involution defective)| (Protein wrinkled) Length = 410 Score = 35.0 bits (79), Expect = 0.15 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = -1 Query: 519 FSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQP-GYSSVMXPRHPXTAPQQQWS 343 F P+ P P + H P TSVS ++ E + +QQP + S P P P Q Sbjct: 132 FFPHGHPNPNSNPHPRTPRTSVS-FSSGEEYNFFRQQQPQPHPSYPAPSTPQPMPPQSAP 190 Query: 342 PSYLYMPYPHAS 307 P + YP S Sbjct: 191 PMHCSHSYPQQS 202
>GDBX_WHEAT (P21292) Gamma-gliadin precursor| Length = 302 Score = 33.1 bits (74), Expect = 0.56 Identities = 19/71 (26%), Positives = 30/71 (42%) Frame = -1 Query: 501 PQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMP 322 PQP ++H T P P+Q Y + Q + P+ P PQQ + P +P Sbjct: 53 PQPHQTFHHQPQQT-----FPQPQQTYPHQPQQQFPQTQQPQQPFPQPQQTF-PQQPQLP 106 Query: 321 YPHASPESYYQ 289 +P + + Q Sbjct: 107 FPQQPQQPFPQ 117
>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) (Protein oracle) Length = 723 Score = 33.1 bits (74), Expect = 0.56 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = -1 Query: 567 AADRSLSPAXEHAHQEFSPYNAPQP-VMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSS 391 AA S +P+ ++ E AP+P V++ + +P S Y P P Y+ PG + Sbjct: 367 AAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRP----SVYQPVPASSYS--PSPGANY 420 Query: 390 VMXPRHPXTAPQQQWSPSYLYMPYP 316 P P AP SP+ Y P P Sbjct: 421 SPTPYTPSPAPAYTPSPAPTYTPSP 445
>SPT5H_PONPY (Q5R405) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1083 Score = 32.7 bits (73), Expect = 0.73 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Frame = -1 Query: 522 EFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPR--HPXTAPQ-Q 352 +FSPY AP P SY + S AP P GY + P HP +P Sbjct: 885 QFSPYAAPSPQGSYQPSPSPQSYHQVAPSP---------AGYQNTHSPASYHPTPSPMAY 935 Query: 351 QWSPSYLYMPYPHASP 304 Q SPS + Y +P Sbjct: 936 QASPSPSPVGYSPMTP 951 Score = 29.6 bits (65), Expect = 6.2 Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 8/99 (8%) Frame = -1 Query: 561 DRSLSPAXEHAHQEFSPYNAPQPVMSYHTA---QPGTSVSXYAPXPEQGYTMRQQPGYSS 391 D S +PA A +P + Y A +P S Y P Q PGY Sbjct: 806 DGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNP-----QTPGYPD 860 Query: 390 VMXPR-HPXTAPQQQWSPSYL----YMPYPHASPESYYQ 289 P+ +P PQ +P+ + PY SP+ YQ Sbjct: 861 PSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQ 899
>SPT5H_HUMAN (O00267) Transcription elongation factor SPT5 (hSPT5) (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) (DSIF p160) (Tat-cotransactivator 1 protein) (Tat-CT1 protein) Length = 1087 Score = 32.7 bits (73), Expect = 0.73 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Frame = -1 Query: 522 EFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPR--HPXTAPQ-Q 352 +FSPY AP P SY + S AP P GY + P HP +P Sbjct: 889 QFSPYAAPSPQGSYQPSPSPQSYHQVAPSP---------AGYQNTHSPASYHPTPSPMAY 939 Query: 351 QWSPSYLYMPYPHASP 304 Q SPS + Y +P Sbjct: 940 QASPSPSPVGYSPMTP 955 Score = 29.6 bits (65), Expect = 6.2 Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 8/99 (8%) Frame = -1 Query: 561 DRSLSPAXEHAHQEFSPYNAPQPVMSYHTA---QPGTSVSXYAPXPEQGYTMRQQPGYSS 391 D S +PA A +P + Y A +P S Y P Q PGY Sbjct: 810 DGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNP-----QTPGYPD 864 Query: 390 VMXPR-HPXTAPQQQWSPSYL----YMPYPHASPESYYQ 289 P+ +P PQ +P+ + PY SP+ YQ Sbjct: 865 PSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQ 903
>SPT5H_MOUSE (O55201) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1082 Score = 32.7 bits (73), Expect = 0.73 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Frame = -1 Query: 522 EFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPR--HPXTAPQ-Q 352 +FSPY AP P SY + S AP P GY + P HP +P Sbjct: 883 QFSPYAAPSPQGSYQPSPSPQSYHQVAPSP---------AGYQNTHSPASYHPTPSPMAY 933 Query: 351 QWSPSYLYMPYPHASP 304 Q SPS + Y +P Sbjct: 934 QASPSPSPVGYSPMTP 949 Score = 29.6 bits (65), Expect = 6.2 Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 8/99 (8%) Frame = -1 Query: 561 DRSLSPAXEHAHQEFSPYNAPQPVMSYHTA---QPGTSVSXYAPXPEQGYTMRQQPGYSS 391 D S +PA A +P + Y A +P S Y P Q PGY Sbjct: 804 DGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNP-----QTPGYPD 858 Query: 390 VMXPR-HPXTAPQQQWSPSYL----YMPYPHASPESYYQ 289 P+ +P PQ +P+ + PY SP+ YQ Sbjct: 859 PSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQ 897
>LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) Length = 727 Score = 32.3 bits (72), Expect = 0.96 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Frame = -1 Query: 567 AADRSLSPAXEHAHQEFSPYNAPQP-VMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSS 391 A S +PA ++ E AP+P V++ + +P S Y P P Y+ PG + Sbjct: 371 AVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRP----SVYQPVPASTYS--PSPGANY 424 Query: 390 VMXPRHPXTAPQQQWSPSYLYMPYP 316 P P AP SP+ Y P P Sbjct: 425 SPTPYTPSPAPAYTPSPAPAYTPSP 449 Score = 30.4 bits (67), Expect = 3.6 Identities = 17/58 (29%), Positives = 24/58 (41%) Frame = -1 Query: 567 AADRSLSPAXEHAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYS 394 A+ S SP ++ ++P AP S A + V Y P P YT P Y+ Sbjct: 413 ASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYN 470
>CHS2_EXODE (P30601) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 2) (Class-I chitin synthase 2) Length = 928 Score = 32.3 bits (72), Expect = 0.96 Identities = 17/55 (30%), Positives = 21/55 (38%) Frame = -1 Query: 447 YAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMPYPHASPESYYQDY 283 Y+P P+ Y + P + P P T P Y P PH P Y DY Sbjct: 116 YSPHPQGDYALDPYPSHDE---PYRPDTDNVPILQPDSAYGPDPHTQPGMDYDDY 167
>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox| protein NK-1) Length = 659 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/69 (28%), Positives = 24/69 (34%) Frame = -1 Query: 546 PAXEHAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPX 367 PA H+HQ P+ P P P S + P T P S + P P Sbjct: 213 PAHPHSHQHPHPHPHPHP-------HPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPA 265 Query: 366 TAPQQQWSP 340 QQ SP Sbjct: 266 MHSDQQMSP 274
>PKP4_HUMAN (Q99569) Plakophilin-4 (p0071)| Length = 1211 Score = 31.6 bits (70), Expect = 1.6 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 16/106 (15%) Frame = -1 Query: 555 SLSPAXEHAHQEFSPYNAPQPVMSYHTAQ---------PGTS------VSXY-APXPEQG 424 S SPA S Y+ QP M Y+ +Q PG+S +S Y +P EQ Sbjct: 1047 SSSPALLGIRDPRSEYDRTQPPMQYYNSQGDATHKGLYPGSSKPSPIYISSYSSPAREQN 1106 Query: 423 YTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMPYPHASPESYYQD 286 ++ Q Y S + ++ + LY+ PH+ + Y+ D Sbjct: 1107 RRLQHQQLYYS------QDDSNRKNFDAYRLYLQSPHSYEDPYFDD 1146
>EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear antigen 6)| (EBNA-6) (EBNA-3C) (EBNA-4B) Length = 992 Score = 31.6 bits (70), Expect = 1.6 Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 2/76 (2%) Frame = -1 Query: 561 DRSLSPAXEHAHQEFSPYNAPQ-PVMSYHTAQPGTS-VSXYAPXPEQGYTMRQQPGYSSV 388 D + PA + +Q + APQ P Y P + Y P G PGY+ Sbjct: 736 DVAAQPAPQAPYQGYQEPPAPQAPYQGYQEPPPPQAPYQGYQEPPAHGLQSSSYPGYAGP 795 Query: 387 MXPRHPXTAPQQQWSP 340 PR + W+P Sbjct: 796 WTPRSQHPCYRHPWAP 811
>SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) (Protein foggy) Length = 1084 Score = 31.2 bits (69), Expect = 2.1 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Frame = -1 Query: 522 EFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPR--HPXTAPQ-Q 352 ++SPY AP P SY + S AP P GY + P HP +P Sbjct: 887 QYSPYAAPSPQGSYQPSPSPQSYHQVAPSP---------VGYQNTHSPASYHPTPSPMAY 937 Query: 351 QWSPSYLYMPYPHASP 304 Q SPS + Y +P Sbjct: 938 QASPSPSPVGYSPMTP 953
>MYLK2_HUMAN (Q9H1R3) Myosin light chain kinase 2, skeletal/cardiac muscle (EC| 2.7.11.18) (MLCK2) Length = 595 Score = 31.2 bits (69), Expect = 2.1 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = -1 Query: 501 PQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMP 322 P + TA P TSV P EQG + Q PG V A ++ SP++L+ P Sbjct: 92 PPAALPQQTATPETSVKK--PKAEQGASGSQDPGKPRVGKKAAEGQAAARRGSPAFLHSP 149
>STUA_EMENI (P36011) Cell pattern formation-associated protein stuA| Length = 622 Score = 31.2 bits (69), Expect = 2.1 Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Frame = -1 Query: 486 SYHTAQPGTSVSXYAPXPEQ---GYTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMPYP 316 SY+T P SV A Q T Q S M PR TAPQ W+P Y P P Sbjct: 463 SYYTTNP--SVGGLAHDHSQLTPDMTGSPQQNGSGRMTPRTSNTAPQ--WAPGYTTPPRP 518 Query: 315 HASPESY 295 A+ Y Sbjct: 519 AAASSLY 525
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 31.2 bits (69), Expect = 2.1 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 13/86 (15%) Frame = -1 Query: 558 RSLSPAXEHAHQEFSPYNAPQPVMSYH---TAQPGTSVSXYAPXPEQGYTMRQQPGYSSV 388 RS SPA +H P+ S H ++Q G+S+ ++P P + T P Y Sbjct: 315 RSTSPAGQHH----------SPISSRHHSSSSQSGSSIQRHSPSPRRKRT--PSPSYQRT 362 Query: 387 MXP----------RHPXTAPQQQWSP 340 + P H ++PQ++ SP Sbjct: 363 LTPPLRRSASPYPSHSLSSPQRKQSP 388
>AMOL1_HUMAN (Q8IY63) Angiomotin-like protein 1| Length = 956 Score = 31.2 bits (69), Expect = 2.1 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = -1 Query: 528 HQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQ-QPGYSSVMXPRHPXTA 361 H+ PY APQPV + +V Y P PE G T R Q + S M P ++ Sbjct: 343 HEMVKPYPAPQPV------RTDVAVLRYQPPPEYGVTSRPCQLPFPSTMQQHSPMSS 393
>SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 238 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Frame = -1 Query: 531 AHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMR-QQPGYSSVMXP-RHPXTAP 358 A Q S YN P SY Q V +A + GY + P Y + P + P P Sbjct: 161 APQPQSGYNQPPAQQSYGQQQAQPHVQPHAQPQQGGYAPKPAAPAYQAPAAPAQRPAPQP 220 Query: 357 QQQWSP 340 QQ ++P Sbjct: 221 QQNFTP 226
>SPT5H_CHICK (Q5ZI08) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1079 Score = 30.8 bits (68), Expect = 2.8 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 3/76 (3%) Frame = -1 Query: 522 EFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPR--HPXTAPQ-Q 352 +FSPY P P SY + S AP P GY + P HP +P Sbjct: 881 QFSPYAVPSPQGSYQPSPSPQSYHQVAPSP---------VGYQNTHSPASYHPTPSPMAY 931 Query: 351 QWSPSYLYMPYPHASP 304 Q SPS + Y +P Sbjct: 932 QASPSPSPVGYSPMTP 947
>ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog| Length = 332 Score = 30.8 bits (68), Expect = 2.8 Identities = 24/92 (26%), Positives = 31/92 (33%), Gaps = 4/92 (4%) Frame = -1 Query: 567 AADRSLSPAXEHAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSV 388 A+ + P + + P +AP+P Q Y P PEQ P +S Sbjct: 97 ASAQPRQPVQQPPEAQVPPQHAPRPTQP---VQQPVQQPAYQPQPEQPLQQPVSPQVASA 153 Query: 387 MXPRHPXTAPQQQ----WSPSYLYMPYPHASP 304 P H P QQ P P P A P Sbjct: 154 PQPVHSAPQPAQQAFQPAEPVAAPQPEPVAEP 185
>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1063 Score = 30.8 bits (68), Expect = 2.8 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%) Frame = -1 Query: 477 TAQPGTSVSXYAPX-----PEQGYTMRQQPGYSSVMXPRHPXTAPQ--QQWSPSYLYMPY 319 T P S Y P P Q ++++ G R P +P+ + PSY + PY Sbjct: 809 TEDPEVSTPSYNPSAKELDPSQALEIKERRGSDG---SRSPTASPKLGNAYLPSYHHSPY 865 Query: 318 PHASPESYYQDYYS 277 HA ++ Q Y S Sbjct: 866 KHAHIPAHAQHYQS 879
>CASC3_MOUSE (Q8K3W3) Protein CASC3 (Cancer susceptibility candidate gene 3| protein homolog) (Metastatic lymph node protein 51 homolog) (MLN 51 protein homolog) (Barentsz protein) (Btz) Length = 697 Score = 30.8 bits (68), Expect = 2.8 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%) Frame = -1 Query: 552 LSPAXEHAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQ--GYTMRQQPGYSSVMXP 379 + P H P+ +P P+ + P S+S P P+Q T PG + P Sbjct: 569 VQPEMHLPHPGLHPHQSPGPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNP 628 Query: 378 RHPXTAPQQQWSPSYLYMPYPHASPESY 295 +P P +LY P A P+ Y Sbjct: 629 NYPYAPGALPPPPPHLY-PNTQAPPQVY 655
>ZYX_MOUSE (Q62523) Zyxin| Length = 564 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = -1 Query: 501 PQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQQ 352 PQP+ + P +SVS +P P +T QQ V +HP P Q Sbjct: 281 PQPIKKWCLRMPPSSVSTGSPQP-PSFTYAQQKEKPLVQEKQHPQPPPAQ 329
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 3/72 (4%) Frame = -1 Query: 558 RSLSPAXEHAHQEFSPYNAP--QPVMSYHTAQ-PGTSVSXYAPXPEQGYTMRQQPGYSSV 388 +SL+ H P +P QP + H AQ PG + P P + + PG + Sbjct: 328 KSLAQTPGHGKFPLGPVKSPAQQPGTAKHPAQQPGPQTAAKVPGPTKTPAQQSGPGKTPA 387 Query: 387 MXPRHPXTAPQQ 352 P +PQQ Sbjct: 388 QQPGPTKPSPQQ 399
>FOXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related protein FKHL2)| (Transcription factor BF-2) (Brain factor 2) (BF2) (HFK2) Length = 469 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/62 (32%), Positives = 24/62 (38%) Frame = -1 Query: 534 HAHQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTAPQ 355 H H P APQP QP P P +G R++ G SS H AP+ Sbjct: 52 HHHHHHPPPPAPQPPPPPQQQQP-------PPPPRRGARRRRRRGPSSCCSAAHAHGAPE 104 Query: 354 QQ 349 Q Sbjct: 105 GQ 106
>YWIS_WHEAT (P14723) Hypothetical 16 kDa protein in middle repetitive insertion| sequence WIS1 Length = 151 Score = 30.0 bits (66), Expect = 4.8 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 8/72 (11%) Frame = -1 Query: 507 NAPQPVMSYHTAQPGTSVSXYAPXPE-QGYTMRQQPGYSSVMXPRH-------PXTAPQQ 352 +AP P+ + H P S+S AP P+ + + + V P H P P Sbjct: 10 SAPLPLSAAHILLPSPSLSSPAPSPQLRSLSCTTSAAATPVPVPHHCLRCCDPPPPPPPP 69 Query: 351 QWSPSYLYMPYP 316 SPS +P+P Sbjct: 70 TPSPSISLLPFP 81
>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2| Length = 954 Score = 30.0 bits (66), Expect = 4.8 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = -3 Query: 280 QPAGDARAATTSGAAPGLVSPARRREPQLV--QRHVIFSPTRTAYGTARLRLATGGR 116 +PA + A+TS +AP +PAR+ P Q +PT G AR + T GR Sbjct: 66 RPAAPSAPASTSSSAPTPAAPARQASPASAHQQAPTPGAPTPRPQGGARPGMPTPGR 122
>AMOL1_MOUSE (Q9D4H4) Angiomotin-like protein 1| Length = 882 Score = 29.6 bits (65), Expect = 6.2 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -1 Query: 528 HQEFSPYNAPQPVMSYHTAQPGTSVSXYAPXPEQGYTMR 412 H+ PY APQP A+ +V Y P PE G T R Sbjct: 269 HEMVKPYPAPQP------ARTEVAVLRYQPPPEYGVTSR 301
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 29.3 bits (64), Expect = 8.1 Identities = 21/84 (25%), Positives = 27/84 (32%), Gaps = 15/84 (17%) Frame = -1 Query: 510 YNAPQPVMSYHTAQP-----GTSVSXYAPXPEQGYTMRQQPGYSSVMXPRHPXTA----- 361 Y P P + P G + Y P+Q +QQ + P P Sbjct: 300 YRTPPPTNTSRGQSPYPPAHGQNSGSYPSSPQQQQQQQQQQQQQAGQQPGGPVPGGPPPG 359 Query: 360 -----PQQQWSPSYLYMPYPHASP 304 PQQ P+ Y PYP P Sbjct: 360 TGQQPPQQNTPPTSQYSPYPQRYP 383
>ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog| Length = 327 Score = 29.3 bits (64), Expect = 8.1 Identities = 26/92 (28%), Positives = 29/92 (31%), Gaps = 17/92 (18%) Frame = -1 Query: 528 HQEFSPYNAPQP-----------VMSYHTAQPGTSVS--XYAPXPEQGYTMRQQPGYSSV 388 HQ PY + QP V H +P V Y P PEQ P + Sbjct: 89 HQYLPPYASAQPRQPVQQPPEAQVPPQHAPRPAQPVQQPAYQPQPEQPLQQPVSPQVAPA 148 Query: 387 MXPRHPXTAPQQQ----WSPSYLYMPYPHASP 304 P H P QQ P P P A P Sbjct: 149 PQPVHSAPQPAQQAFQPAEPVAAPQPEPVAEP 180
>PDCD7_MOUSE (Q9WTY1) Programmed cell death protein 7 (ES18)| Length = 482 Score = 29.3 bits (64), Expect = 8.1 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = -1 Query: 441 PXPEQGYTMRQQPGYSSVMXPRHPXTAPQQQWSPSYLYMPYP 316 P P R PG +V PR P P WSP + P P Sbjct: 87 PLPPPPPQCRPFPGPDAVERPRPPPPGPGPPWSPRWAEAPPP 128
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 29.3 bits (64), Expect = 8.1 Identities = 25/97 (25%), Positives = 31/97 (31%), Gaps = 11/97 (11%) Frame = -1 Query: 558 RSLSPAXEHAHQEFSPYNAPQPVMSY-----------HTAQPGTSVSXYAPXPEQGYTMR 412 R SP H H Y P P Y ++ P T V P +G+ + Sbjct: 167 RRPSPPSRHGHPPPPTYAQPPPTPIYSPSPQVQPPPTYSPPPPTHVQPTPSPPSRGH--Q 224 Query: 411 QQPGYSSVMXPRHPXTAPQQQWSPSYLYMPYPHASPE 301 QP P H P Q SP P P P+ Sbjct: 225 PQPPTHRHAPPTHRHAPPTHQPSPLRHLPPSPRRQPQ 261
>EFP_NOCFA (Q5YTL1) Elongation factor P (EF-P)| Length = 187 Score = 29.3 bits (64), Expect = 8.1 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = -3 Query: 256 ATTSGAAPGLVSPARRREPQLVQRHVIFSPTRTAYGTARLRLATGGRVAKKT--AS*YIE 83 A TS GLV + Q+V+ + A+ +L+ G++ KT A +E Sbjct: 2 ADTSDFKNGLVLKIDGQLQQIVEFQHVKPGKGPAFVRTKLKNVVSGKIVDKTFNAGVKVE 61 Query: 82 TSXVVARVACYLFHD 38 T+ V R YL+HD Sbjct: 62 TATVDRRDMTYLYHD 76 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,654,411 Number of Sequences: 219361 Number of extensions: 1075952 Number of successful extensions: 4091 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3648 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3990 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)