ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd14j04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464026.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1875 Score = 105 bits (53), Expect = 5e-20 Identities = 110/131 (83%) Strand = Plus / Minus Query: 60 cttcttctttttctgggccttggcaattgtcttcctgtcaacgnaagcangtagntcctc 119 ||||||||||||||| |||||||||| ||| ||||| | | | || |||| ||||| Sbjct: 1857 cttcttctttttctgagccttggcaacctccttactgtcgatgtaggctagtagttcctc 1798 Query: 120 ttgcctgataagagcctcgngcagagccttctttgttacantgagctcagcttccagngc 179 |||||||||||||||||| | || ||||||||||||||| | || ||||||||||| || Sbjct: 1797 ttgcctgataagagcctcatgtagggccttctttgttacaataagttcagcttccagcgc 1738 Query: 180 atccacacggc 190 ||||||||||| Sbjct: 1737 atccacacggc 1727
>dbj|AK060180.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-B05, full insert sequence Length = 1467 Score = 105 bits (53), Expect = 5e-20 Identities = 110/131 (83%) Strand = Plus / Minus Query: 60 cttcttctttttctgggccttggcaattgtcttcctgtcaacgnaagcangtagntcctc 119 ||||||||||||||| |||||||||| ||| ||||| | | | || |||| ||||| Sbjct: 1252 cttcttctttttctgagccttggcaacctccttactgtcgatgtaggctagtagttcctc 1193 Query: 120 ttgcctgataagagcctcgngcagagccttctttgttacantgagctcagcttccagngc 179 |||||||||||||||||| | || ||||||||||||||| | || ||||||||||| || Sbjct: 1192 ttgcctgataagagcctcatgtagggccttctttgttacaataagttcagcttccagcgc 1133 Query: 180 atccacacggc 190 ||||||||||| Sbjct: 1132 atccacacggc 1122
>gb|AY103718.1| Zea mays PCO128797 mRNA sequence Length = 1097 Score = 85.7 bits (43), Expect = 4e-14 Identities = 134/164 (81%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 25 tctctctccttgtcctagtagcaagacattggcttcttcttctttttctgggccttggca 84 |||| ||||||||||||||||||| ||||| ||| |||||||| |||| ||||||||| Sbjct: 943 tctccctccttgtcctagtagcaaagcattg-ctt--tcttctttctctgagccttggca 887 Query: 85 attgtcttcctgtcaacgnaagcangtagntcctcttgcctgataagagcctcgngcaga 144 || || | ||| | | | ||| | || |||||||||||||||||||||||| ||| | Sbjct: 886 atctctttgcggtcgatgtacgcaagcagttcctcttgcctgataagagcctcgtgcaaa 827 Query: 145 gccttctttgttacantgagctcagcttccagngcatccacacg 188 ||||||||||||||| | || || ||||||| ||||| ||||| Sbjct: 826 gccttctttgttacaattagttcggcttccaatgcatcgacacg 783
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 6e-07 Identities = 41/45 (91%) Strand = Plus / Minus Query: 146 ccttctttgttacantgagctcagcttccagngcatccacacggc 190 |||||||||||||| | || ||||||||||| ||||||||||||| Sbjct: 1747794 ccttctttgttacaataagttcagcttccagcgcatccacacggc 1747750 Score = 58.0 bits (29), Expect = 1e-05 Identities = 65/78 (83%) Strand = Plus / Minus Query: 60 cttcttctttttctgggccttggcaattgtcttcctgtcaacgnaagcangtagntcctc 119 ||||||||||||||| |||||||||| ||| ||||| | | | || |||| ||||| Sbjct: 1747986 cttcttctttttctgagccttggcaacctccttactgtcgatgtaggctagtagttcctc 1747927 Query: 120 ttgcctgataagagcctc 137 |||||||||||||||||| Sbjct: 1747926 ttgcctgataagagcctc 1747909
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 61.9 bits (31), Expect = 6e-07 Identities = 41/45 (91%) Strand = Plus / Minus Query: 146 ccttctttgttacantgagctcagcttccagngcatccacacggc 190 |||||||||||||| | || ||||||||||| ||||||||||||| Sbjct: 65806 ccttctttgttacaataagttcagcttccagcgcatccacacggc 65762 Score = 58.0 bits (29), Expect = 1e-05 Identities = 65/78 (83%) Strand = Plus / Minus Query: 60 cttcttctttttctgggccttggcaattgtcttcctgtcaacgnaagcangtagntcctc 119 ||||||||||||||| |||||||||| ||| ||||| | | | || |||| ||||| Sbjct: 65998 cttcttctttttctgagccttggcaacctccttactgtcgatgtaggctagtagttcctc 65939 Query: 120 ttgcctgataagagcctc 137 |||||||||||||||||| Sbjct: 65938 ttgcctgataagagcctc 65921
>ref|NM_203088.1| Arabidopsis thaliana EIF2 BETA AT5G20920 (EIF2 BETA) transcript variant AT5G20920.2 mRNA, complete cds Length = 1151 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 280 ttggcttcttcttctttttct 260
>ref|NM_122100.2| Arabidopsis thaliana EIF2 BETA AT5G20920 (EIF2 BETA) transcript variant AT5G20920.1 mRNA, complete cds Length = 1194 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 323 ttggcttcttcttctttttct 303
>ref|XM_718047.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P2B (CaO19_5928), mRNA Length = 336 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 293 ttggcttcttcttctttttct 273
>ref|XM_717900.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P2B (CaO19_13349), mRNA Length = 336 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 293 ttggcttcttcttctttttct 273
>ref|XM_716398.1| Candida albicans SC5314 hypothetical protein (CaO19_2993), mRNA Length = 315 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 22 ttggcttcttcttctttttct 42
>ref|XM_716397.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P1A (CaO19_2992), mRNA Length = 321 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 278 ttggcttcttcttctttttct 258
>ref|XM_716126.1| Candida albicans SC5314 hypothetical protein (CaO19_10510), mRNA Length = 315 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 22 ttggcttcttcttctttttct 42
>ref|XM_716125.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P1A (CaO19_10509), mRNA Length = 321 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 278 ttggcttcttcttctttttct 258
>gb|U80448.1| Caenorhabditis elegans cosmid F59A3, complete sequence Length = 42663 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 gcttcttcttctttttctggg 76 ||||||||||||||||||||| Sbjct: 11543 gcttcttcttctttttctggg 11523
>gb|AC093131.2| Papio anubis clone RP41-51G4, complete sequence Length = 181049 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 cttcttcttctttttctgggc 77 ||||||||||||||||||||| Sbjct: 70678 cttcttcttctttttctgggc 70698
>gb|BT000056.1| Arabidopsis thaliana translation initiation factor eIF-2 beta chain-like protein (At5g20920) mRNA, complete cds Length = 844 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 211 ttggcttcttcttctttttct 191
>emb|AL033497.1|CAC49C10 C.albicans cosmid Ca49C10 Length = 37825 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 3465 ttggcttcttcttctttttct 3485
>ref|NM_204597.1| Gallus gallus eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2), mRNA Length = 1405 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 336 ttggcttcttcttctttttct 316
>gb|AY128324.1| Arabidopsis thaliana translation initiation factor eIF-2 beta chain-like protein (At5g20920) mRNA, complete cds Length = 1095 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 282 ttggcttcttcttctttttct 262
>emb|CR385806.1| Gallus gallus finished cDNA, clone ChEST69l11 Length = 1390 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 345 ttggcttcttcttctttttct 325
>ref|NM_182039.3| Caenorhabditis elegans F59A3.2b (F59A3.2) mRNA, complete cds Length = 2131 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 gcttcttcttctttttctggg 76 ||||||||||||||||||||| Sbjct: 86 gcttcttcttctttttctggg 66
>ref|NM_059216.2| Caenorhabditis elegans F59A3.2a (F59A3.2) mRNA, complete cds Length = 2943 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 gcttcttcttctttttctggg 76 ||||||||||||||||||||| Sbjct: 86 gcttcttcttctttttctggg 66
>emb|BX829594.1|CNS0A1BT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1040 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 280 ttggcttcttcttctttttct 260
>gb|AF317662.1|AF317662 Candida albicans 60S acidic ribosomal protein type P2-B (p2B) gene, complete cds Length = 481 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 300 ttggcttcttcttctttttct 280
>gb|AF317659.1|AF317659 Candida albicans 60S acidic ribosomal protein type P1-A (p1A) gene, complete cds Length = 398 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 285 ttggcttcttcttctttttct 265
>emb|AJ294707.1|GGA294707 Gallus gallus mRNA for eukaryote initiation factor 2B (EIF2B gene) Length = 1405 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttct 73 ||||||||||||||||||||| Sbjct: 336 ttggcttcttcttctttttct 316
>gb|AC109298.19| Mus musculus chromosome 3, clone RP24-271A4, complete sequence Length = 191546 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tggcttcttcttctttttct 73 |||||||||||||||||||| Sbjct: 103768 tggcttcttcttctttttct 103787
>gb|AC115803.17| Mus musculus chromosome 8, clone RP23-410F24, complete sequence Length = 169100 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 acattggcttcttcttctttttct 73 ||||||||||||||||||| |||| Sbjct: 697 acattggcttcttcttcttcttct 674
>gb|AC160243.10| Mus musculus chromosome 8, clone RP24-130G22, complete sequence Length = 154337 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 acattggcttcttcttctttttct 73 ||||||||||||||||||| |||| Sbjct: 21293 acattggcttcttcttcttcttct 21316
>gb|AC159455.1| Trypanosoma brucei chromosome 5 clone RPCI93-6E7, complete sequence Length = 170328 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 cttcttcttctttttctgggcctt 80 |||||||||||||| ||||||||| Sbjct: 5309 cttcttcttcttttcctgggcctt 5332
>ref|XM_456781.1| Debaryomyces hansenii CBS767 DhTRK1 (DhTRK1) partial mRNA Length = 3153 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttc 72 |||||||||||||||||||| Sbjct: 1552 ttggcttcttcttctttttc 1533
>gb|AC124437.4| Mus musculus BAC clone RP24-257N6 from chromosome 3, complete sequence Length = 149145 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 agcaagacattggcttcttc 63 |||||||||||||||||||| Sbjct: 146875 agcaagacattggcttcttc 146894
>gb|BT012971.1| Lycopersicon esculentum clone 114181F, mRNA sequence Length = 865 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tggcttcttcttctttttct 73 |||||||||||||||||||| Sbjct: 51 tggcttcttcttctttttct 32
>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence Length = 225183 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 gtctctctccttgtcctagt 43 |||||||||||||||||||| Sbjct: 17800 gtctctctccttgtcctagt 17781
>ref|XM_968464.1| PREDICTED: Tribolium castaneum similar to CG11670-PA (LOC662364), mRNA Length = 246 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 ttcttcttctttttctgggc 77 |||||||||||||||||||| Sbjct: 233 ttcttcttctttttctgggc 214
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ttggcttcttcttctttttc 72 |||||||||||||||||||| Sbjct: 871349 ttggcttcttcttctttttc 871368
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14 Length = 198563 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gcttcttcttctttttctgg 75 |||||||||||||||||||| Sbjct: 122686 gcttcttcttctttttctgg 122667
>gb|AC124907.3| Equus caballus clone CH241-409I22, complete sequence Length = 202157 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 tctctctccttgtcctagtagcaa 48 |||||||||||||||||| ||||| Sbjct: 43405 tctctctccttgtcctagcagcaa 43382
>gb|AC154413.3| Mus musculus BAC clone RP24-230J5 from chromosome 13, complete sequence Length = 174730 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tggcttcttcttctttttct 73 |||||||||||||||||||| Sbjct: 86485 tggcttcttcttctttttct 86466
>dbj|AK055518.1| Homo sapiens cDNA FLJ30956 fis, clone HCASM2000202 Length = 1981 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tggcttcttcttctttttct 73 |||||||||||||||||||| Sbjct: 24 tggcttcttcttctttttct 5
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete sequence Length = 104009 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gcttcttcttctttttctgg 75 |||||||||||||||||||| Sbjct: 42368 gcttcttcttctttttctgg 42387
>gb|AC092612.3| Homo sapiens BAC clone RP11-174F8 from 4, complete sequence Length = 145706 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tctctctccttgtcctagta 44 |||||||||||||||||||| Sbjct: 10341 tctctctccttgtcctagta 10322
>ref|XM_692734.1| PREDICTED: Danio rerio similar to bromodomain containing 2 (LOC569354), mRNA Length = 1859 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tggcttcttcttctttttct 73 |||||||||||||||||||| Sbjct: 1739 tggcttcttcttctttttct 1720
>dbj|AK030962.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830471B11 product:unclassifiable, full insert sequence Length = 4788 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tggcttcttcttctttttct 73 |||||||||||||||||||| Sbjct: 4656 tggcttcttcttctttttct 4675
>gb|AC073848.4|AC073848 Homo sapiens BAC clone RP11-669M16 from 4, complete sequence Length = 163636 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tggcttcttcttctttttct 73 |||||||||||||||||||| Sbjct: 113858 tggcttcttcttctttttct 113839
>gb|AF353095.1|AF353095 Arabidopsis thaliana protein synthesis initiation factor eIF2 beta mRNA, complete cds Length = 1160 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tggcttcttcttctttttct 73 |||||||||||||||||||| Sbjct: 308 tggcttcttcttctttttct 289
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gcttcttcttctttttctgg 75 |||||||||||||||||||| Sbjct: 12950155 gcttcttcttctttttctgg 12950174
>gb|AY087810.1| Arabidopsis thaliana clone 3855 mRNA, complete sequence Length = 1134 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tggcttcttcttctttttct 73 |||||||||||||||||||| Sbjct: 321 tggcttcttcttctttttct 302
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tggcttcttcttctttttct 73 |||||||||||||||||||| Sbjct: 39926 tggcttcttcttctttttct 39945
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gcttcttcttctttttctgg 75 |||||||||||||||||||| Sbjct: 24452 gcttcttcttctttttctgg 24471
>emb|AL929270.14| Mouse DNA sequence from clone RP23-100K15 on chromosome X, complete sequence Length = 115038 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 acattggcttcttcttctttttct 73 ||||||| |||||||||||||||| Sbjct: 112746 acattggtttcttcttctttttct 112723
>ref|XM_320711.2| Anopheles gambiae str. PEST ENSANGP00000008820 (ENSANGG00000006647), partial mRNA Length = 1782 Score = 40.1 bits (20), Expect = 2.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 58 ttcttcttctttttctgggccttggcaa 85 ||||||||||||||||| ||||||||| Sbjct: 1775 ttcttcttctttttctgctccttggcaa 1748
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV, complete sequence Length = 183147 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gcttcttcttctttttctgg 75 |||||||||||||||||||| Sbjct: 130423 gcttcttcttctttttctgg 130442
>gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, complete sequence Length = 170353 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 gtctctctccttgtcctagt 43 |||||||||||||||||||| Sbjct: 107978 gtctctctccttgtcctagt 107959
>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 Length = 80196 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gcttcttcttctttttctgg 75 |||||||||||||||||||| Sbjct: 61161 gcttcttcttctttttctgg 61142
>emb|AL162311.5|CNS01RHR Human chromosome 14 DNA sequence BAC R-317N8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167127 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ttcttcttctttttctgggc 77 |||||||||||||||||||| Sbjct: 20033 ttcttcttctttttctgggc 20052
>emb|AJ620491.1| Olea europaea putative gypsy retrotransposon partial integrase pseudogene and LTR, clone Oeg05 Length = 964 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttc 72 |||||||||||||||||||| Sbjct: 515 ttggcttcttcttctttttc 496
>emb|AJ620490.1| Olea europaea putative gypsy retrotransposon partial integrase pseudogene and LTR, clone Oeg04 Length = 1390 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttctttttc 72 |||||||||||||||||||| Sbjct: 513 ttggcttcttcttctttttc 494
>gb|AC131698.4| Mus musculus BAC clone RP23-428E12 from 3, complete sequence Length = 191438 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 agcaagacattggcttcttc 63 |||||||||||||||||||| Sbjct: 170554 agcaagacattggcttcttc 170535
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 tctctctccttgtcctagtagcaa 48 |||||||||||||||||| ||||| Sbjct: 551599 tctctctccttgtcctagcagcaa 551576
>emb|AL672287.12| Mouse DNA sequence from clone RP23-151I8 on chromosome X, complete sequence Length = 81776 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 acattggcttcttcttctttttct 73 ||||||| |||||||||||||||| Sbjct: 79484 acattggtttcttcttctttttct 79461
>gb|M27296.1|SUSEND16 Sea urchin (S.purpuratus) Endo16 gene, partial cds Length = 794 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cttcttcttctttttctggg 76 |||||||||||||||||||| Sbjct: 778 cttcttcttctttttctggg 759
>gb|AC153385.3| Mus musculus 6 BAC RP23-64D14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226269 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 tctttttctgggccttggc 83 ||||||||||||||||||| Sbjct: 103231 tctttttctgggccttggc 103249
>gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, complete sequence Length = 196086 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 ttctttttctgggccttgg 82 ||||||||||||||||||| Sbjct: 113810 ttctttttctgggccttgg 113792
>ref|XM_550396.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1090 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 acattggcttcttcttctt 68 ||||||||||||||||||| Sbjct: 806 acattggcttcttcttctt 788
>gb|AC165958.2| Mus musculus BAC clone RP23-417I20 from chromosome 16, complete sequence Length = 186202 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 ctctctccttgtcctagta 44 ||||||||||||||||||| Sbjct: 80312 ctctctccttgtcctagta 80330
>gb|AC169508.1| Mus musculus BAC clone RP23-167I21 from chromosome 16, complete sequence Length = 211870 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 ctctctccttgtcctagta 44 ||||||||||||||||||| Sbjct: 32834 ctctctccttgtcctagta 32852
>ref|NM_212675.1| Danio rerio eukaryotic translation initiation factor 2, subunit 2 beta (eif2s2), mRNA Length = 1317 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 128 ggcttcttcttctttttct 110
>gb|AC167468.2| Mus musculus BAC clone RP23-163J2 from chromosome 10, complete sequence Length = 219954 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 ttggcttcttcttcttttt 71 ||||||||||||||||||| Sbjct: 53300 ttggcttcttcttcttttt 53318
>gb|AC139043.6| Mus musculus chromosome 3, clone RP23-321I11, complete sequence Length = 194537 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 ctttttctgggccttggca 84 ||||||||||||||||||| Sbjct: 47727 ctttttctgggccttggca 47745
>ref|XM_368455.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00789.4) partial mRNA Length = 1005 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 371 ggcttcttcttctttttct 353
>ref|XM_362595.1| Magnaporthe grisea 70-15 hypothetical protein (MG08178.4) partial mRNA Length = 2817 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 60 cttcttctttttctgggccttgg 82 |||||||||||||||| |||||| Sbjct: 522 cttcttctttttctggcccttgg 500
>ref|XM_418967.1| PREDICTED: Gallus gallus similar to chromosome 6 open reading frame 145 (LOC420880), mRNA Length = 3128 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 tggcttcttcttctttttc 72 ||||||||||||||||||| Sbjct: 2807 tggcttcttcttctttttc 2825
>gb|AC100986.9| Mus musculus chromosome 3, clone RP23-77E5, complete sequence Length = 112141 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 59261 ggcttcttcttctttttct 59279
>gb|AY809024.1| Schistosoma japonicum SJCHGC08662 protein mRNA, partial cds Length = 760 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttcttttt 71 ||||||||||||||||||| Sbjct: 386 ttggcttcttcttcttttt 368
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 tcttcttctttttctgggc 77 ||||||||||||||||||| Sbjct: 4590540 tcttcttctttttctgggc 4590558
>ref|NM_001040371.1| Danio rerio zgc:136620 (zgc:136620), mRNA Length = 2965 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgggcct 79 |||||||||||| |||||||||| Sbjct: 2626 cttcttcttcttcttctgggcct 2604
>gb|AC165348.3| Mus musculus BAC clone RP23-300C11 from chromosome 3, complete sequence Length = 198637 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 9793 ggcttcttcttctttttct 9775
>gb|AC121302.7| Mus musculus chromosome 13, clone RP23-163B12, complete sequence Length = 190256 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 cttcttcttctttttctgg 75 ||||||||||||||||||| Sbjct: 166714 cttcttcttctttttctgg 166732
>emb|Z75548.1|CER90 Caenorhabditis elegans Cosmid R90, complete sequence Length = 25360 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 20102 ggcttcttcttctttttct 20084
>gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, complete sequence Length = 239758 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 ttctttttctgggccttgg 82 ||||||||||||||||||| Sbjct: 145254 ttctttttctgggccttgg 145272
>gb|AC072028.14| Homo sapiens 3 BAC RP11-190C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186739 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 ttggcttcttcttcttttt 71 ||||||||||||||||||| Sbjct: 45826 ttggcttcttcttcttttt 45844
>ref|XM_799742.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510637.9) partial mRNA Length = 6191 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 58 ttcttcttctttttctgggcctt 80 ||||| ||||||||||||||||| Sbjct: 5665 ttctttttctttttctgggcctt 5687
>emb|CR720005.2|CNS0GII3 Tetraodon nigroviridis full-length cDNA Length = 1764 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 174 ggcttcttcttctttttct 156
>emb|CR697488.2|CNS0G14S Tetraodon nigroviridis full-length cDNA Length = 1645 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 50 ggcttcttcttctttttct 32
>emb|CR696725.2|CNS0G0JL Tetraodon nigroviridis full-length cDNA Length = 1766 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 172 ggcttcttcttctttttct 154
>emb|CR679835.2|CNS0FNIF Tetraodon nigroviridis full-length cDNA Length = 1454 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 172 ggcttcttcttctttttct 154
>emb|CR664557.2|CNS0FBQR Tetraodon nigroviridis full-length cDNA Length = 1454 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 172 ggcttcttcttctttttct 154
>emb|CR651203.2|CNS0F1FT Tetraodon nigroviridis full-length cDNA Length = 1728 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 145 ggcttcttcttctttttct 127
>emb|BX629346.17| Zebrafish DNA sequence from clone DKEY-16N21 in linkage group 6, complete sequence Length = 214213 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 101605 ggcttcttcttctttttct 101587
>gb|BC115198.1| Danio rerio similar to alpha globin regulatory element containing gene, mRNA (cDNA clone MGC:136620 IMAGE:7039976), complete cds Length = 2965 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgggcct 79 |||||||||||| |||||||||| Sbjct: 2626 cttcttcttcttcttctgggcct 2604
>emb|AL356141.9| Human DNA sequence from clone RP11-269L3 on chromosome 10, complete sequence Length = 87871 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 ttcttcttctttttctggg 76 ||||||||||||||||||| Sbjct: 31429 ttcttcttctttttctggg 31411
>emb|AL161445.10| Human DNA sequence from clone RP11-326F20 on chromosome 9 Contains the B4GALT1 gene for UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 (GGTB2), a novel gene, the SPINK4 gene for serine protease inhibitor, Kazal type 4 (PEC-60), the 3' end of the BAG1 gene for BCL2-associated athanogene and a CpG island, complete sequence Length = 163396 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 85582 ggcttcttcttctttttct 85600
>gb|AC162918.3| Mus musculus BAC clone RP23-370K14 from chromosome 10, complete sequence Length = 165624 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttcttttt 71 ||||||||||||||||||| Sbjct: 88147 ttggcttcttcttcttttt 88129
>gb|AC154318.3| Mus musculus BAC clone RP23-316D19 from chromosome 12, complete sequence Length = 176391 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttcttttt 71 ||||||||||||||||||| Sbjct: 91080 ttggcttcttcttcttttt 91062
>emb|AL929176.4| Zebrafish DNA sequence from clone XX-187G17 in linkage group 3 Contains two novel genes similar to hbaa1 (hemoglobin alpha-adult 1), the ba1 gene for ba1 globin, a novel gene similar to ba1, a novel gene for alpha and a novel gene for beta globin, a novel gene, a novel gene similar to human CGTHBA (conserved gene telomeric to alpha globin cluster), a novel gene similar to human MPG (N-methylpurine-DNA glycosylase) and two CpG islands, complete sequence Length = 100902 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgggcct 79 |||||||||||| |||||||||| Sbjct: 74409 cttcttcttcttcttctgggcct 74387
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgg 75 ||||||||||||||||||| Sbjct: 59811 cttcttcttctttttctgg 59793
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgg 75 ||||||||||||||||||| Sbjct: 3106 cttcttcttctttttctgg 3088
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60 Length = 196677 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgg 75 ||||||||||||||||||| Sbjct: 194783 cttcttcttctttttctgg 194765
>emb|BX323026.5| Mouse DNA sequence from clone RP24-95F14 on chromosome 11 Contains the Ppm1d gene for magnesium-dependent protein phosphatase 1D delta isoform, the 5' end of the Bcas3 gene for breast carcinoma amplified sequence 3 and a CpG island, complete sequence Length = 130030 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgg 75 ||||||||||||||||||| Sbjct: 11306 cttcttcttctttttctgg 11288
>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6, complete sequence Length = 220671 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 23840 ggcttcttcttctttttct 23822
>gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosome 10, complete sequence Length = 209583 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 ttcttctttttctgggcct 79 ||||||||||||||||||| Sbjct: 195171 ttcttctttttctgggcct 195153
>gb|BC066706.1| Danio rerio eukaryotic translation initiation factor 2, subunit 2 beta, mRNA (cDNA clone MGC:77084 IMAGE:6960321), complete cds Length = 1317 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 128 ggcttcttcttctttttct 110
>ref|NM_001025534.1| Danio rerio similar to alpha globin regulatory element containing gene (bY187G17.8), mRNA Length = 2503 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgggcct 79 |||||||||||| |||||||||| Sbjct: 2181 cttcttcttcttcttctgggcct 2159
>gb|AC090458.5| Homo sapiens chromosome 11, clone CTD-2572N17, complete sequence Length = 142233 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 cttcttctttttctgggcc 78 ||||||||||||||||||| Sbjct: 101612 cttcttctttttctgggcc 101630
>gb|AC111151.3| Homo sapiens chromosome 11, clone CTD-2557D6, complete sequence Length = 131271 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 60 cttcttctttttctgggcc 78 ||||||||||||||||||| Sbjct: 82465 cttcttctttttctgggcc 82447
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 acattggcttcttcttctt 68 ||||||||||||||||||| Sbjct: 1336658 acattggcttcttcttctt 1336676
>ref|NM_166415.1| Drosophila melanogaster CG3216-RB, transcript variant B (CG3216), mRNA Length = 3426 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 cttctttttctgggccttg 81 ||||||||||||||||||| Sbjct: 1636 cttctttttctgggccttg 1654
>dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBa, evx homologue on hoxBa Length = 235883 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 138198 ggcttcttcttctttttct 138216
>dbj|AB207138.1| Oryzias latipes nppc3 and nppb genes for C-type natriuretic peptide-3 precursor, B-type natriuretic peptide precursor, complete cds Length = 38866 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 28715 ggcttcttcttctttttct 28733
>ref|NM_136611.2| Drosophila melanogaster Mystery 45A CG8070-RA (Mys45A), mRNA Length = 2391 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 ttcttcttctttttctgggcctt 80 ||||| ||||||||||||||||| Sbjct: 915 ttctttttctttttctgggcctt 893
>ref|NM_079319.2| Drosophila melanogaster Eukaryotic initiation factor 2 CG4153-RA (eIF-2beta), mRNA Length = 1136 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 346 ggcttcttcttctttttct 328
>gb|AY071253.1| Drosophila melanogaster RE29270 full length cDNA Length = 1150 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 346 ggcttcttcttctttttct 328
>gb|AY070560.1| Drosophila melanogaster LD33051 full length cDNA Length = 2390 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 ttcttcttctttttctgggcctt 80 ||||| ||||||||||||||||| Sbjct: 900 ttctttttctttttctgggcctt 878
>ref|XM_692813.1| PREDICTED: Danio rerio similar to Eukaryotic translation initiation factor 2, subunit 2 beta (LOC569429), mRNA Length = 1332 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 173 ggcttcttcttctttttct 155
>gb|AF173549.1|AF173549 Drosophila melanogaster mystery 45A mRNA, complete cds Length = 2139 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 ttcttcttctttttctgggcctt 80 ||||| ||||||||||||||||| Sbjct: 833 ttctttttctttttctgggcctt 811
>gb|AC161147.6| Mus musculus BAC clone RP23-357G12 from chromosome 6, complete sequence Length = 225957 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 ttggcttcttcttcttttt 71 ||||||||||||||||||| Sbjct: 163207 ttggcttcttcttcttttt 163189
>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170988 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 94957 ggcttcttcttctttttct 94975
>emb|BX649593.5| Zebrafish DNA sequence from clone CH211-12G4 in linkage group 18, complete sequence Length = 71293 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgggcct 79 |||||||||||| |||||||||| Sbjct: 69337 cttcttcttcttcttctgggcct 69315
>gb|AC025763.5| Homo sapiens chromosome 16 clone CTB-186A5, complete sequence Length = 194690 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 165435 ggcttcttcttctttttct 165417
>gb|AC093049.1| Drosophila melanogaster, chromosome 2R, region 45A-45A, BAC clone BACR08E17, complete sequence Length = 178262 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 ttcttcttctttttctgggcctt 80 ||||| ||||||||||||||||| Sbjct: 9368 ttctttttctttttctgggcctt 9346
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 7092367 ggcttcttcttctttttct 7092349
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 ttggcttcttcttcttttt 71 ||||||||||||||||||| Sbjct: 17494152 ttggcttcttcttcttttt 17494170
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 acattggcttcttcttctt 68 ||||||||||||||||||| Sbjct: 4214322 acattggcttcttcttctt 4214340 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 aagacattggcttcttctt 65 ||||||||||||||||||| Sbjct: 3703883 aagacattggcttcttctt 3703901
>gb|AC139667.5| Homo sapiens 3 BAC RP11-88B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135668 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 49 gacattggcttcttcttcttttt 71 |||||| |||||||||||||||| Sbjct: 59631 gacattagcttcttcttcttttt 59653
>gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, region 45A-46A, BAC clone BACR10M14, complete sequence Length = 189757 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 58 ttcttcttctttttctgggcctt 80 ||||| ||||||||||||||||| Sbjct: 40682 ttctttttctttttctgggcctt 40704
>gb|AC007888.7|AC007888 Drosophila melanogaster, chromosome 2R, region 57B6-57B13, BAC clone BACR10P11, complete sequence Length = 164035 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 cttctttttctgggccttg 81 ||||||||||||||||||| Sbjct: 47282 cttctttttctgggccttg 47300
>gb|AC090523.1|AC090523 Caenorhabditis briggsae cosmid CB015N01, complete sequence Length = 98319 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 cttcttcttctttttctgg 75 ||||||||||||||||||| Sbjct: 46214 cttcttcttctttttctgg 46232
>gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, complete sequence Length = 196085 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 51 cattggcttcttcttctttttct 73 |||||||||||||||||| |||| Sbjct: 129085 cattggcttcttcttcttcttct 129107
>gb|AC137643.3| Homo sapiens chromosome 16 clone RP11-95H3, complete sequence Length = 159836 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 91955 ggcttcttcttctttttct 91973
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 ttggcttcttcttcttttt 71 ||||||||||||||||||| Sbjct: 123147 ttggcttcttcttcttttt 123165
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 aagacattggcttcttctt 65 ||||||||||||||||||| Sbjct: 112363 aagacattggcttcttctt 112381
>gb|AC016651.8| Homo sapiens chromosome 5 clone RP1-251I12, complete sequence Length = 117963 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 cttcttcttctttttctgg 75 ||||||||||||||||||| Sbjct: 102959 cttcttcttctttttctgg 102977
>gb|AF296838.1|T29J13 Arabidopsis thaliana BAC T29J13 Length = 100592 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 tggcttcttcttctttttc 72 ||||||||||||||||||| Sbjct: 52732 tggcttcttcttctttttc 52750
>emb|AJ620188.1| Solanum yellow leaf curl virus segment B, complete sequence Length = 2702 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 ttcttcttctttttctggg 76 ||||||||||||||||||| Sbjct: 2228 ttcttcttctttttctggg 2210
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 acattggcttcttcttctt 68 ||||||||||||||||||| Sbjct: 52289 acattggcttcttcttctt 52307
>emb|BX682227.3| Mouse DNA sequence from clone RP23-190N2 on chromosome X, complete sequence Length = 76641 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgg 75 ||||||||||||||||||| Sbjct: 72674 cttcttcttctttttctgg 72656
>emb|AL808135.13| Mouse DNA sequence from clone RP23-186D8 on chromosome X, complete sequence Length = 155880 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgg 75 ||||||||||||||||||| Sbjct: 69249 cttcttcttctttttctgg 69231
>emb|AL663069.10| Mouse DNA sequence from clone RP23-410P8 on chromosome 11, complete sequence Length = 55963 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 cttcttctttttctgggcc 78 ||||||||||||||||||| Sbjct: 34960 cttcttctttttctgggcc 34978
>emb|AL953863.13| Zebrafish DNA sequence from clone CH211-113F11 in linkage group 14, complete sequence Length = 163814 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 57 cttcttcttctttttctgggcct 79 |||||||||||| |||||||||| Sbjct: 95401 cttcttcttcttcttctgggcct 95423
>emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 in linkage group 13, complete sequence Length = 165993 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 gcttcttcttctttttctg 74 ||||||||||||||||||| Sbjct: 3447 gcttcttcttctttttctg 3429
>dbj|AK108226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-F04, full insert sequence Length = 1089 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 acattggcttcttcttctt 68 ||||||||||||||||||| Sbjct: 805 acattggcttcttcttctt 787
>gb|AC154783.2| Mus musculus BAC clone RP24-466C8 from 12, complete sequence Length = 167125 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 ttggcttcttcttcttttt 71 ||||||||||||||||||| Sbjct: 19045 ttggcttcttcttcttttt 19063
>gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.419_J_16, complete sequence Length = 203591 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 cttggcaattgtcttcctg 96 ||||||||||||||||||| Sbjct: 143011 cttggcaattgtcttcctg 142993
>gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16 of 73 of the complete sequence Length = 243313 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 58 ttcttcttctttttctgggcctt 80 ||||| ||||||||||||||||| Sbjct: 47524 ttctttttctttttctgggcctt 47546
>emb|AL133299.4|CNS01DUN Human chromosome 14 DNA sequence BAC R-62H20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 164935 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 cttctttttctgggccttg 81 ||||||||||||||||||| Sbjct: 46347 cttctttttctgggccttg 46329
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete sequence Length = 265524 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 215109 ggcttcttcttctttttct 215127
>gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60 of 73 of the complete sequence Length = 303438 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 cttctttttctgggccttg 81 ||||||||||||||||||| Sbjct: 203986 cttctttttctgggccttg 203968
>dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-752I5, complete sequence Length = 200108 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 cttggcaattgtcttcctg 96 ||||||||||||||||||| Sbjct: 128404 cttggcaattgtcttcctg 128422
>gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, region 44F12-45A4, P1 clones DS05998, DS07727, DS05175, and DS01885, complete sequence Length = 204617 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 ttcttcttctttttctgggcctt 80 ||||| ||||||||||||||||| Sbjct: 1180 ttctttttctttttctgggcctt 1158
>dbj|AP005660.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1090H4, complete sequence Length = 161970 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 cctcttgcctgataagagc 134 ||||||||||||||||||| Sbjct: 155653 cctcttgcctgataagagc 155635
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 ttggcttcttcttcttttt 71 ||||||||||||||||||| Sbjct: 17503192 ttggcttcttcttcttttt 17503210
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 7092246 ggcttcttcttctttttct 7092228
>emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb0069I24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 68450 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 60053 ggcttcttcttctttttct 60035
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 667 ggcttcttcttctttttct 649
>gb|AC005268.1|AC005268 Drosophila melanogaster DNA sequence (P1s DS03550 (D225) and DS02397 (D206)), complete sequence Length = 89791 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 cttctttttctgggccttg 81 ||||||||||||||||||| Sbjct: 75743 cttctttttctgggccttg 75761
>emb|AL929130.4| Zebrafish DNA sequence from clone CH211-287M16 in linkage group 18, complete sequence Length = 149702 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 57 cttcttcttctttttctgggcct 79 |||||||||||| |||||||||| Sbjct: 44 cttcttcttcttcttctgggcct 22
>emb|AL844896.7| Mouse DNA sequence from clone RP23-356L21 on chromosome 2, complete sequence Length = 83203 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 caattgtcttcctgtcaac 101 ||||||||||||||||||| Sbjct: 48264 caattgtcttcctgtcaac 48282
>gb|L19197.1|DROEIF2BET Drosophila melanogaster eIF-2 beta-subunit mRNA, complete cds Length = 1099 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ggcttcttcttctttttct 73 ||||||||||||||||||| Sbjct: 311 ggcttcttcttctttttct 293
>gb|AC002311.1| Arabidopsis thaliana chromosome I BAC T26J12 genomic sequence, complete sequence Length = 85855 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 gcttcttcttctttttctg 74 ||||||||||||||||||| Sbjct: 72490 gcttcttcttctttttctg 72508
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 cttcttcttctttttctgg 75 ||||||||||||||||||| Sbjct: 17829 cttcttcttctttttctgg 17847
>dbj|AP003692.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1608C10, complete sequence Length = 149110 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 cctcttgcctgataagagc 134 ||||||||||||||||||| Sbjct: 37146 cctcttgcctgataagagc 37128 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,586,095 Number of Sequences: 3902068 Number of extensions: 2586095 Number of successful extensions: 696814 Number of sequences better than 10.0: 162 Number of HSP's better than 10.0 without gapping: 162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 694377 Number of HSP's gapped (non-prelim): 2436 length of query: 190 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 168 effective length of database: 17,147,199,772 effective search space: 2880729561696 effective search space used: 2880729561696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
