Clone Name | rbasd14i21 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_191881.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2637 Score = 309 bits (156), Expect = 6e-81 Identities = 243/272 (89%) Strand = Plus / Minus Query: 397 ctcctctgatgcatctgcaagtgcctcgagcatgttcaaaacatcattagtatcgtccaa 456 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 2583 ctcctctgatgcatctgcaagcgcctcaagcatgttcaaaacatcattagtatcgtccaa 2524 Query: 457 ataatacttggccttgcttggtttctggccgactgtgcaggcatagagcgaggtttgggg 516 ||| ||||| ||||||||||| ||||||||||||||||| ||||| | || |||||||| Sbjct: 2523 atagtacttagccttgcttggcttctggccgactgtgcacgcatataatgatgtttgggg 2464 Query: 517 atcaacaatgctccgcctcataatatcagctattccttcaaacatatcctcatctgatcg 576 |||||| ||||||| ||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 2463 atcaactatgctccttctcatgatatcagcaattccttcaaacatatcctcgtctgatct 2404 Query: 577 atcatcacctatgcagaggacaaaatctgcttgctttttattctctgtcagcatcgatag 636 |||||| ||||||||||| ||||||||||| || | || |||||||||||| | ||||| Sbjct: 2403 atcatcgcctatgcagagaacaaaatctgcctgtctcttgttctctgtcagcgttgatag 2344 Query: 637 gatcttctctgcgacaaatcccttgctgacac 668 ||||||||| || |||||||| |||||||||| Sbjct: 2343 gatcttctcagcaacaaatcctttgctgacac 2312
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 309 bits (156), Expect = 6e-81 Identities = 243/272 (89%) Strand = Plus / Minus Query: 397 ctcctctgatgcatctgcaagtgcctcgagcatgttcaaaacatcattagtatcgtccaa 456 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 30457264 ctcctctgatgcatctgcaagcgcctcaagcatgttcaaaacatcattagtatcgtccaa 30457205 Query: 457 ataatacttggccttgcttggtttctggccgactgtgcaggcatagagcgaggtttgggg 516 ||| ||||| ||||||||||| ||||||||||||||||| ||||| | || |||||||| Sbjct: 30457204 atagtacttagccttgcttggcttctggccgactgtgcacgcatataatgatgtttgggg 30457145 Query: 517 atcaacaatgctccgcctcataatatcagctattccttcaaacatatcctcatctgatcg 576 |||||| ||||||| ||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 30457144 atcaactatgctccttctcatgatatcagcaattccttcaaacatatcctcgtctgatct 30457085 Query: 577 atcatcacctatgcagaggacaaaatctgcttgctttttattctctgtcagcatcgatag 636 |||||| ||||||||||| ||||||||||| || | || |||||||||||| | ||||| Sbjct: 30457084 atcatcgcctatgcagagaacaaaatctgcctgtctcttgttctctgtcagcgttgatag 30457025 Query: 637 gatcttctctgcgacaaatcccttgctgacac 668 ||||||||| || |||||||| |||||||||| Sbjct: 30457024 gatcttctcagcaacaaatcctttgctgacac 30456993 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 403 tgatgcatctgcaagtgcctcgagcatgttcaaaacatcattagtatcgtcca 455 |||||||| |||||| ||||| |||||| ||||||||||||||||||| |||| Sbjct: 42651578 tgatgcatatgcaagcgcctcaagcatgctcaaaacatcattagtatcatcca 42651630 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 203 ttattgacattgatctgactatctgtatattactaaagctgcact 247 |||||||||||||| || ||| ||| ||||||||||| |||||| Sbjct: 30457459 ttattgacattgatttgtctaactgagtattactaaagttgcact 30457415
>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435H01 Length = 160141 Score = 309 bits (156), Expect = 6e-81 Identities = 243/272 (89%) Strand = Plus / Minus Query: 397 ctcctctgatgcatctgcaagtgcctcgagcatgttcaaaacatcattagtatcgtccaa 456 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 85527 ctcctctgatgcatctgcaagcgcctcaagcatgttcaaaacatcattagtatcgtccaa 85468 Query: 457 ataatacttggccttgcttggtttctggccgactgtgcaggcatagagcgaggtttgggg 516 ||| ||||| ||||||||||| ||||||||||||||||| ||||| | || |||||||| Sbjct: 85467 atagtacttagccttgcttggcttctggccgactgtgcacgcatataatgatgtttgggg 85408 Query: 517 atcaacaatgctccgcctcataatatcagctattccttcaaacatatcctcatctgatcg 576 |||||| ||||||| ||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 85407 atcaactatgctccttctcatgatatcagcaattccttcaaacatatcctcgtctgatct 85348 Query: 577 atcatcacctatgcagaggacaaaatctgcttgctttttattctctgtcagcatcgatag 636 |||||| ||||||||||| ||||||||||| || | || |||||||||||| | ||||| Sbjct: 85347 atcatcgcctatgcagagaacaaaatctgcctgtctcttgttctctgtcagcgttgatag 85288 Query: 637 gatcttctctgcgacaaatcccttgctgacac 668 ||||||||| || |||||||| |||||||||| Sbjct: 85287 gatcttctcagcaacaaatcctttgctgacac 85256 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 203 ttattgacattgatctgactatctgtatattactaaagctgcact 247 |||||||||||||| || ||| ||| ||||||||||| |||||| Sbjct: 85722 ttattgacattgatttgtctaactgagtattactaaagttgcact 85678
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 309 bits (156), Expect = 6e-81 Identities = 243/272 (89%) Strand = Plus / Minus Query: 397 ctcctctgatgcatctgcaagtgcctcgagcatgttcaaaacatcattagtatcgtccaa 456 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 142991 ctcctctgatgcatctgcaagcgcctcaagcatgttcaaaacatcattagtatcgtccaa 142932 Query: 457 ataatacttggccttgcttggtttctggccgactgtgcaggcatagagcgaggtttgggg 516 ||| ||||| ||||||||||| ||||||||||||||||| ||||| | || |||||||| Sbjct: 142931 atagtacttagccttgcttggcttctggccgactgtgcacgcatataatgatgtttgggg 142872 Query: 517 atcaacaatgctccgcctcataatatcagctattccttcaaacatatcctcatctgatcg 576 |||||| ||||||| ||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 142871 atcaactatgctccttctcatgatatcagcaattccttcaaacatatcctcgtctgatct 142812 Query: 577 atcatcacctatgcagaggacaaaatctgcttgctttttattctctgtcagcatcgatag 636 |||||| ||||||||||| ||||||||||| || | || |||||||||||| | ||||| Sbjct: 142811 atcatcgcctatgcagagaacaaaatctgcctgtctcttgttctctgtcagcgttgatag 142752 Query: 637 gatcttctctgcgacaaatcccttgctgacac 668 ||||||||| || |||||||| |||||||||| Sbjct: 142751 gatcttctcagcaacaaatcctttgctgacac 142720 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 203 ttattgacattgatctgactatctgtatattactaaagctgcact 247 |||||||||||||| || ||| ||| ||||||||||| |||||| Sbjct: 143186 ttattgacattgatttgtctaactgagtattactaaagttgcact 143142
>dbj|AK105417.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A05, full insert sequence Length = 2455 Score = 309 bits (156), Expect = 6e-81 Identities = 243/272 (89%) Strand = Plus / Minus Query: 397 ctcctctgatgcatctgcaagtgcctcgagcatgttcaaaacatcattagtatcgtccaa 456 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 1984 ctcctctgatgcatctgcaagcgcctcaagcatgttcaaaacatcattagtatcgtccaa 1925 Query: 457 ataatacttggccttgcttggtttctggccgactgtgcaggcatagagcgaggtttgggg 516 ||| ||||| ||||||||||| ||||||||||||||||| ||||| | || |||||||| Sbjct: 1924 atagtacttagccttgcttggcttctggccgactgtgcacgcatataatgatgtttgggg 1865 Query: 517 atcaacaatgctccgcctcataatatcagctattccttcaaacatatcctcatctgatcg 576 |||||| ||||||| ||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 1864 atcaactatgctccttctcatgatatcagcaattccttcaaacatatcctcgtctgatct 1805 Query: 577 atcatcacctatgcagaggacaaaatctgcttgctttttattctctgtcagcatcgatag 636 |||||| ||||||||||| ||||||||||| || | || |||||||||||| | ||||| Sbjct: 1804 atcatcgcctatgcagagaacaaaatctgcctgtctcttgttctctgtcagcgttgatag 1745 Query: 637 gatcttctctgcgacaaatcccttgctgacac 668 ||||||||| || |||||||| |||||||||| Sbjct: 1744 gatcttctcagcaacaaatcctttgctgacac 1713 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 203 ttattgacattgatctgactatctgtatattactaaagctgcact 247 |||||||||||||| || ||| ||| ||||||||||| |||||| Sbjct: 2179 ttattgacattgatttgtctaactgagtattactaaagttgcact 2135
>dbj|AK101207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031A01, full insert sequence Length = 3122 Score = 309 bits (156), Expect = 6e-81 Identities = 243/272 (89%) Strand = Plus / Minus Query: 397 ctcctctgatgcatctgcaagtgcctcgagcatgttcaaaacatcattagtatcgtccaa 456 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 2726 ctcctctgatgcatctgcaagcgcctcaagcatgttcaaaacatcattagtatcgtccaa 2667 Query: 457 ataatacttggccttgcttggtttctggccgactgtgcaggcatagagcgaggtttgggg 516 ||| ||||| ||||||||||| ||||||||||||||||| ||||| | || |||||||| Sbjct: 2666 atagtacttagccttgcttggcttctggccgactgtgcacgcatataatgatgtttgggg 2607 Query: 517 atcaacaatgctccgcctcataatatcagctattccttcaaacatatcctcatctgatcg 576 |||||| ||||||| ||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 2606 atcaactatgctccttctcatgatatcagcaattccttcaaacatatcctcgtctgatct 2547 Query: 577 atcatcacctatgcagaggacaaaatctgcttgctttttattctctgtcagcatcgatag 636 |||||| ||||||||||| ||||||||||| || | || |||||||||||| | ||||| Sbjct: 2546 atcatcgcctatgcagagaacaaaatctgcctgtctcttgttctctgtcagcgttgatag 2487 Query: 637 gatcttctctgcgacaaatcccttgctgacac 668 ||||||||| || |||||||| |||||||||| Sbjct: 2486 gatcttctcagcaacaaatcctttgctgacac 2455 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 203 ttattgacattgatctgactatctgtatattactaaagctgcact 247 |||||||||||||| || ||| ||| ||||||||||| |||||| Sbjct: 2921 ttattgacattgatttgtctaactgagtattactaaagttgcact 2877
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 403 tgatgcatctgcaagtgcctcgagcatgttcaaaacatcattagtatcgtcca 455 |||||||| |||||| ||||| |||||| ||||||||||||||||||| |||| Sbjct: 172461 tgatgcatatgcaagcgcctcaagcatgctcaaaacatcattagtatcatcca 172513
>gb|AF483209.1| Solanum tuberosum putative trehalose synthase (StTS1) gene, exons 1 through 4 and complete cds Length = 8590 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 553 ttcaaacatatcctcatctgatcgatcatcacctatgcagaggacaaaatc 603 |||||||||||| |||||||||| ||||||||| ||||| || |||||||| Sbjct: 7103 ttcaaacatatcttcatctgatctatcatcaccaatgcaaagcacaaaatc 7053
>ref|XM_475716.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2700 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 553 ttcaaacatatcctcatctgatcgatcatcacctatgcagaggacaaaatctgc 606 ||||||||||||||||||||| | |||||||| ||||| | ||||||||||| Sbjct: 2439 ttcaaacatatcctcatctgacctgtcatcaccaatgcataatacaaaatctgc 2386
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 553 ttcaaacatatcctcatctgatcgatcatcacctatgcagaggacaaaatctgc 606 ||||||||||||||||||||| | |||||||| ||||| | ||||||||||| Sbjct: 85568 ttcaaacatatcctcatctgacctgtcatcaccaatgcataatacaaaatctgc 85515
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 553 ttcaaacatatcctcatctgatcgatcatcacctatgcagaggacaaaatctgc 606 ||||||||||||||||||||| | |||||||| ||||| | ||||||||||| Sbjct: 25445207 ttcaaacatatcctcatctgacctgtcatcaccaatgcataatacaaaatctgc 25445154
>dbj|AK072066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H22, full insert sequence Length = 3498 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 553 ttcaaacatatcctcatctgatcgatcatcacctatgcagaggacaaaatctgc 606 ||||||||||||||||||||| | |||||||| ||||| | ||||||||||| Sbjct: 2614 ttcaaacatatcctcatctgacctgtcatcaccaatgcataatacaaaatctgc 2561
>ref|NM_117886.2| Arabidopsis thaliana ATTPS5; transferase, transferring glycosyl groups / trehalose-phosphatase AT4G17770 (ATTPS5) mRNA, complete cds Length = 3052 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 554 tcaaacatatcctcatctgatcgatcatcacctatgcagag 594 ||||||||||||||||| || ||||||||||| | |||||| Sbjct: 2671 tcaaacatatcctcatcagaccgatcatcaccgacgcagag 2631
>emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 9 Length = 81835 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 554 tcaaacatatcctcatctgatcgatcatcacctatgcagag 594 ||||||||||||||||| || ||||||||||| | |||||| Sbjct: 45210 tcaaacatatcctcatcagaccgatcatcaccgacgcagag 45170
>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47 Length = 198067 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 554 tcaaacatatcctcatctgatcgatcatcacctatgcagag 594 ||||||||||||||||| || ||||||||||| | |||||| Sbjct: 40222 tcaaacatatcctcatcagaccgatcatcaccgacgcagag 40182
>dbj|AK221368.1| Arabidopsis thaliana mRNA for trehalose-6-phosphate synthase like protein, complete cds, clone: RAFL25-34-L01 Length = 633 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 554 tcaaacatatcctcatctgatcgatcatcacctatgcagag 594 ||||||||||||||||| || ||||||||||| | |||||| Sbjct: 337 tcaaacatatcctcatcagaccgatcatcaccgacgcagag 297
>gb|BT005967.1| Arabidopsis thaliana At4g17770 gene, complete cds Length = 2589 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 554 tcaaacatatcctcatctgatcgatcatcacctatgcagag 594 ||||||||||||||||| || ||||||||||| | |||||| Sbjct: 2378 tcaaacatatcctcatcagaccgatcatcaccgacgcagag 2338
>gb|AY089209.1| Arabidopsis thaliana clone 95947 mRNA, complete sequence Length = 2957 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 554 tcaaacatatcctcatctgatcgatcatcacctatgcagag 594 ||||||||||||||||| || ||||||||||| | |||||| Sbjct: 2670 tcaaacatatcctcatcagaccgatcatcaccgacgcagag 2630
>dbj|AK118703.1| Arabidopsis thaliana At4g17770 mRNA for putative trehalose-6-phosphate synthase, complete cds, clone: RAFL19-96-N16 Length = 2774 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 554 tcaaacatatcctcatctgatcgatcatcacctatgcagag 594 ||||||||||||||||| || ||||||||||| | |||||| Sbjct: 2479 tcaaacatatcctcatcagaccgatcatcaccgacgcagag 2439
>ref|NM_127426.2| Arabidopsis thaliana ATTPS11; transferase, transferring glycosyl groups AT2G18700 (ATTPS11) mRNA, complete cds Length = 2800 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 461 tacttggccttgcttggtttctggccgactgtgca 495 |||||||||||||| |||||||| || |||||||| Sbjct: 2447 tacttggccttgctcggtttctgaccaactgtgca 2413
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 553 ttcaaacatatcctcatctgatcgatcatcaccta 587 |||||||||||| |||||||| |||||||| |||| Sbjct: 77949 ttcaaacatatcttcatctgaacgatcatctccta 77983
>gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map CIC06E08, complete sequence Length = 88413 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 461 tacttggccttgcttggtttctggccgactgtgca 495 |||||||||||||| |||||||| || |||||||| Sbjct: 31530 tacttggccttgctcggtttctgaccaactgtgca 31496
>gb|AY081537.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1047 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 461 tacttggccttgcttggtttctggccgactgtgca 495 |||||||||||||| |||||||| || |||||||| Sbjct: 755 tacttggccttgctcggtttctgaccaactgtgca 721
>gb|AY042865.1| Arabidopsis thaliana Unknown protein (At2g18700) mRNA, complete cds Length = 1122 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 461 tacttggccttgcttggtttctggccgactgtgca 495 |||||||||||||| |||||||| || |||||||| Sbjct: 770 tacttggccttgctcggtttctgaccaactgtgca 736
>dbj|AP006632.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16I03, TM0056, complete sequence Length = 102883 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 457 ataatacttggccttgcttggtttctg 483 |||||||||||||||||| |||||||| Sbjct: 94318 ataatacttggccttgctaggtttctg 94344
>emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in linkage group 11, complete sequence Length = 128109 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 171 ataaaataaaccaaaactagac 192 |||||||||||||||||||||| Sbjct: 115722 ataaaataaaccaaaactagac 115701
>gb|AC137667.18| Medicago truncatula clone mth2-30h5, complete sequence Length = 111249 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 553 ttcaaacatatcctcatctgatcgatcatcacc 585 ||||||||| ||||||||||||| |||||||| Sbjct: 29105 ttcaaacatgtcctcatctgatctgtcatcacc 29137
>gb|AC135160.22| Medicago truncatula clone mth2-20m5, complete sequence Length = 120202 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 553 ttcaaacatatcctcatctgatcgatcatcacc 585 ||||||||| ||||||||||||| |||||||| Sbjct: 94936 ttcaaacatgtcctcatctgatctgtcatcacc 94904
>emb|AL929208.9| Zebrafish DNA sequence from clone DKEY-56P7 in linkage group 7, complete sequence Length = 189608 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 593 aggacaaaatctgcttgctttttat 617 |||| |||||||||||||||||||| Sbjct: 168730 aggaaaaaatctgcttgctttttat 168706
>ref|NM_100521.1| Arabidopsis thaliana ATTPS7; transferase, transferring glycosyl groups / trehalose-phosphatase AT1G06410 (ATTPS7) mRNA, complete cds Length = 3053 Score = 40.1 bits (20), Expect = 9.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 444 tagtatcgtccaaataatacttggccttgcttggtttctggccgactgtgca 495 ||||||||||||| || || || ||||||||||| || || || |||||||| Sbjct: 2470 tagtatcgtccaagtagtatttagccttgcttggcttttgcccaactgtgca 2419
>gb|AC165138.6| Mus musculus chromosome 15, clone RP24-61P10, complete sequence Length = 170282 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 gacaaaatctgcttgctttt 614 |||||||||||||||||||| Sbjct: 60573 gacaaaatctgcttgctttt 60592
>gb|AF470088.1| Zea mays P-type R2R3 Myb protein (Myb41) gene, partial cds Length = 1913 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ctgcactccagctagctgaa 260 |||||||||||||||||||| Sbjct: 546 ctgcactccagctagctgaa 527
>gb|AC147362.2| Homo sapiens chromosome 16 clone RP11-449J19, complete sequence Length = 169792 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 tcagctattccttcaaacatatcc 565 ||||||||||||||||| |||||| Sbjct: 157552 tcagctattccttcaaagatatcc 157575 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 tcagctattccttcaaacatatcc 565 ||||||||||||||||| |||||| Sbjct: 114192 tcagctattccttcaaagatatcc 114215 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 tcagctattccttcaaacatatcc 565 ||||||||||||||||| |||||| Sbjct: 79596 tcagctattccttcaaagatatcc 79573
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 578 tcatcacctatgcagaggacaaaa 601 |||||||||||| ||||||||||| Sbjct: 154387 tcatcacctatgtagaggacaaaa 154410
>gb|AF523363.1| Leishmania major ORF-q, quinonoid dihydropteridine reductase (QDPR), and 20S proteasome beta 7 subunit genes, complete cds Length = 3540 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ctggccgactgtgcaggcat 500 |||||||||||||||||||| Sbjct: 2998 ctggccgactgtgcaggcat 3017
>gb|AC136621.2| Homo sapiens chromosome 16 clone RP11-481F24, complete sequence Length = 186021 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 tcagctattccttcaaacatatcc 565 ||||||||||||||||| |||||| Sbjct: 149729 tcagctattccttcaaagatatcc 149706
>gb|AC116038.3| Homo sapiens chromosome 3 clone RP11-134J21, complete sequence Length = 167476 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 cagaatgtgaaaattactccaaaa 152 |||||| ||||||||||||||||| Sbjct: 50712 cagaatatgaaaattactccaaaa 50689
>gb|AC108423.10| Mus musculus chromosome 16, clone RP23-443N12, complete sequence Length = 192819 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 aaaaagaagtctagaaaagatacc 86 ||||||||| |||||||||||||| Sbjct: 179547 aaaaagaagcctagaaaagatacc 179570
>emb|AL139389.16| Human DNA sequence from clone RP11-411K7 on chromosome 6 Contains the 3' end of a novel gene, an enhancer of rudimentary homolog (Drosophila)(ERH) pseudogene, the 5' end of a novel gene and a novel gene, complete sequence Length = 156721 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 tctagacagaatgtgaaaat 142 |||||||||||||||||||| Sbjct: 115915 tctagacagaatgtgaaaat 115896
>emb|AL157766.9| Human DNA sequence from clone RP11-40O20 on chromosome 13q12.11-12.2 Contains the 3' end of the SGCG gene for sarcoglycan gamma (35kD dystrophin-associated glycoprotein), the SACS gene for spastic ataxia of Charlevoix-Saguenay (sacsin), a ribosomal protein large P1 (RPLP1) pseudogene and a CpG island, complete sequence Length = 92693 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 tgaacttggcttcaacttag 276 |||||||||||||||||||| Sbjct: 63321 tgaacttggcttcaacttag 63340
>gb|AF224336.1| Frog adenovirus 1, complete genome Length = 26163 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cagctagctgaacttggctt 268 |||||||||||||||||||| Sbjct: 23175 cagctagctgaacttggctt 23156
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 578 tcatcacctatgcagaggacaaaa 601 |||||||||||| ||||||||||| Sbjct: 55711 tcatcacctatgtagaggacaaaa 55688
>gb|AC020766.10| Homo sapiens chromosome 16 clone RP11-70N16, complete sequence Length = 173595 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 tcagctattccttcaaacatatcc 565 ||||||||||||||||| |||||| Sbjct: 39507 tcagctattccttcaaagatatcc 39530 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 tcagctattccttcaaacatatcc 565 ||||||||||||||||| |||||| Sbjct: 5272 tcagctattccttcaaagatatcc 5249
>gb|AC007602.6| Homo sapiens chromosome 16 clone RP11-2D4, complete sequence Length = 167094 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 tcagctattccttcaaacatatcc 565 ||||||||||||||||| |||||| Sbjct: 64705 tcagctattccttcaaagatatcc 64728 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 tcagctattccttcaaacatatcc 565 ||||||||||||||||| |||||| Sbjct: 24326 tcagctattccttcaaagatatcc 24349
>gb|BC053533.1| Homo sapiens MTERF domain containing 2, mRNA (cDNA clone MGC:61716 IMAGE:4417008), complete cds Length = 1612 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aaaattacgagaaggcaaaa 168 |||||||||||||||||||| Sbjct: 1568 aaaattacgagaaggcaaaa 1587
>dbj|AK125469.1| Homo sapiens cDNA FLJ43480 fis, clone OCBBF3000380 Length = 3661 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tgaacttggcttcaacttag 276 |||||||||||||||||||| Sbjct: 350 tgaacttggcttcaacttag 331
>gb|AC002387.3| Arabidopsis thaliana chromosome 2 clone F4L23 map CIC02E07, complete sequence Length = 122928 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 434 aaaacatcattagtatcgtccaaataat 461 |||| |||||||||||||||||| |||| Sbjct: 100461 aaaatatcattagtatcgtccaactaat 100434
>gb|AC093874.3| Homo sapiens BAC clone RP11-624O16 from 4, complete sequence Length = 158245 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 taacagaaaaaagaagtcta 75 |||||||||||||||||||| Sbjct: 15100 taacagaaaaaagaagtcta 15081
>gb|AC016207.9| Homo sapiens, clone RP11-25H20, complete sequence Length = 169476 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 caaaatctgcttgcttttta 616 |||||||||||||||||||| Sbjct: 154745 caaaatctgcttgcttttta 154726
>gb|AC079349.6| Homo sapiens BAC clone RP11-436A7 from 4, complete sequence Length = 193632 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 caaacatatcctcatctgat 574 |||||||||||||||||||| Sbjct: 180278 caaacatatcctcatctgat 180259
>gb|AC091930.3| Homo sapiens chromosome 5 clone RP11-2A20, complete sequence Length = 167826 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 ttcaaaacatcattagtatc 450 |||||||||||||||||||| Sbjct: 92619 ttcaaaacatcattagtatc 92600
>gb|AC139044.6| Mus musculus chromosome 15, clone RP23-249A8, complete sequence Length = 148569 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 595 gacaaaatctgcttgctttt 614 |||||||||||||||||||| Sbjct: 16862 gacaaaatctgcttgctttt 16843
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 acttccgaaacactcaaatc 35 |||||||||||||||||||| Sbjct: 1200853 acttccgaaacactcaaatc 1200872
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 578 tcatcacctatgcagaggacaaaa 601 |||||||||||| ||||||||||| Sbjct: 24353278 tcatcacctatgtagaggacaaaa 24353301
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 557 aacatatcctcatctgatcgatcatcacctatgcagaggacaaa 600 ||||| || ||||| || || |||||||| |||||||||||||| Sbjct: 13824028 aacatgtcttcatcggagcggtcatcaccgatgcagaggacaaa 13823985
>gb|AC068143.4|T2D23 Sequence of BAC T2D23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 41039 Score = 40.1 bits (20), Expect = 9.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 444 tagtatcgtccaaataatacttggccttgcttggtttctggccgactgtgca 495 ||||||||||||| || || || ||||||||||| || || || |||||||| Sbjct: 36098 tagtatcgtccaagtagtatttagccttgcttggcttttgcccaactgtgca 36047
>gb|AC108733.4| Homo sapiens 3 BAC RP11-789F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171184 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gaaaaaagaagtctagaaaa 80 |||||||||||||||||||| Sbjct: 83205 gaaaaaagaagtctagaaaa 83186
>gb|AC087612.6| Homo sapiens chromosome 15, clone RP11-69G7, complete sequence Length = 145405 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 caaaatctgcttgcttttta 616 |||||||||||||||||||| Sbjct: 17721 caaaatctgcttgcttttta 17702
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 557 aacatatcctcatctgatcgatcatcacctatgcagaggacaaa 600 ||||| || ||||| || || |||||||| |||||||||||||| Sbjct: 73512 aacatgtcttcatcggagcggtcatcaccgatgcagaggacaaa 73469
>dbj|AB119998.1| Homo sapiens CES1A2 gene for carboxylesterase HU1b, complete cds Length = 30275 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 tcagctattccttcaaacatatcc 565 ||||||||||||||||| |||||| Sbjct: 17495 tcagctattccttcaaagatatcc 17472
>dbj|AB119997.1| Homo sapiens CES1A1 gene for carboxylesterase HU1a, complete cds Length = 30295 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 tcagctattccttcaaacatatcc 565 ||||||||||||||||| |||||| Sbjct: 17515 tcagctattccttcaaagatatcc 17492
>dbj|AK105382.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B06, full insert sequence Length = 4111 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 557 aacatatcctcatctgatcgatcatcacctatgcagaggacaaa 600 ||||| || ||||| || || |||||||| |||||||||||||| Sbjct: 3133 aacatgtcttcatcggagcggtcatcaccgatgcagaggacaaa 3090
>gb|AC102608.14| Mus musculus chromosome 3, clone RP23-402L6, complete sequence Length = 185014 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ttcaaaacatcattagtatc 450 |||||||||||||||||||| Sbjct: 141504 ttcaaaacatcattagtatc 141523
>dbj|AP002814.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-882G5, complete sequence Length = 167198 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ctgactatctgtatattact 236 |||||||||||||||||||| Sbjct: 4257 ctgactatctgtatattact 4276
>dbj|AP001836.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-693I21, complete sequence Length = 145782 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ctgactatctgtatattact 236 |||||||||||||||||||| Sbjct: 87772 ctgactatctgtatattact 87791
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 578 tcatcacctatgcagaggacaaaa 601 |||||||||||| ||||||||||| Sbjct: 24664947 tcatcacctatgtagaggacaaaa 24664970 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,973,352 Number of Sequences: 3902068 Number of extensions: 6973352 Number of successful extensions: 116076 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115716 Number of HSP's gapped (non-prelim): 360 length of query: 673 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 650 effective length of database: 17,143,297,704 effective search space: 11143143507600 effective search space used: 11143143507600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)