Clone Name | rbasd14i18 |
---|---|
Clone Library Name | barley_pub |
>WBS22_MOUSE (Q9CY21) Putative methyltransferase WBSCR22 (EC 2.1.1.-)| (Williams-Beuren syndrome chromosome region 22 protein homolog) Length = 281 Score = 121 bits (303), Expect = 2e-27 Identities = 71/155 (45%), Positives = 95/155 (61%) Frame = -2 Query: 663 LKAFFGSLYRCLARGARAVLQFYADNVKQTEMLVSFAMKAGFAGGVVIDWPHSSKAKKSY 484 L FF SLY L RGARAVLQ Y +N +Q E++ + A +AGF GGVV+D+P+S+KAKK Y Sbjct: 142 LYCFFSSLYSALVRGARAVLQLYPENSEQLELITTQATRAGFTGGVVVDFPNSAKAKKFY 201 Query: 483 LVLTCGTSSVTSLPKGKGENGEMCXXXXXXXXXXXXXDQTVGTYGRNRSNKRQKVNKKNG 304 L L G S TSLPKG E+ + +++ T R K ++ K Sbjct: 202 LCLFSGPS--TSLPKGLTESQD-----------ADQASESMFTSERAPHKKARRDLVKKS 248 Query: 303 RGKDWLLRKKEQMRKRGREVPADTKYTGRKRKTRF 199 R +W+L KKE+ R++G+EV DT+YTGRKRK RF Sbjct: 249 R--EWVLEKKERRRRQGKEVRPDTQYTGRKRKPRF 281
>WBS22_HUMAN (O43709) Putative methyltransferase WBSCR22 (EC 2.1.1.-)| (Williams-Beuren syndrome chromosome region 22 protein) Length = 281 Score = 115 bits (287), Expect = 2e-25 Identities = 70/157 (44%), Positives = 96/157 (61%), Gaps = 2/157 (1%) Frame = -2 Query: 663 LKAFFGSLYRCLARGARAVLQFYADNVKQTEMLVSFAMKAGFAGGVVIDWPHSSKAKKSY 484 L FF SL+ L RG+RAVLQ Y +N +Q E++ + A KAGF+GG+V+D+P+S+KAKK Y Sbjct: 142 LYCFFASLFSVLVRGSRAVLQLYPENSEQLELITTQATKAGFSGGMVVDYPNSAKAKKFY 201 Query: 483 LVLTCGTSSVTSLPKGKGENGEMCXXXXXXXXXXXXXDQTVGTYGR--NRSNKRQKVNKK 310 L L G S T +P+G EN + ++V T R R ++R V K Sbjct: 202 LCLFSGPS--TFIPEGLSENQD-----------EVEPRESVFTNERFPLRMSRRGMVRK- 247 Query: 309 NGRGKDWLLRKKEQMRKRGREVPADTKYTGRKRKTRF 199 + W+L KKE+ R++GREV DT+YTGRKRK RF Sbjct: 248 ---SRAWVLEKKERHRRQGREVRPDTQYTGRKRKPRF 281
>YAU6_SCHPO (Q10162) Hypothetical methyltransferase C26A3.06 in chromosome I| Length = 268 Score = 96.3 bits (238), Expect = 7e-20 Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 1/156 (0%) Frame = -2 Query: 663 LKAFFGSLYRCLARGARAVLQFYADNVKQTEMLVSFAMKAGFAGGVVIDWPHSSKAKKSY 484 L FF +LY + RG RAV+Q+Y + K +M++ A KAGFAGG+V+D P S + KK Y Sbjct: 137 LNRFFQTLYISMKRGGRAVMQYYPETEKSQQMIMDTARKAGFAGGIVVDHPESKRQKKYY 196 Query: 483 LVLTCGTSSVTSLPKGKGENGEMCXXXXXXXXXXXXXDQTVGTYGRNRSNKRQKVNKKNG 304 LVL G + + T+ G N ++ K K++ Sbjct: 197 LVLQAGGTRTLDI-----------------------SSMTLDQEGTNAKQRKLK-KKQDM 232 Query: 303 RGKDWLLRKKEQMRKRGR-EVPADTKYTGRKRKTRF 199 +++++ KKE RKRGR VP D+KY+GR+RK F Sbjct: 233 STREYIIHKKELNRKRGRLHVPKDSKYSGRRRKAAF 268
>BUD23_YEAST (P25627) Putative methyltransferase BUD23 (EC 2.1.1.-) (Bud site| selection protein 23) Length = 275 Score = 92.4 bits (228), Expect = 1e-18 Identities = 57/155 (36%), Positives = 83/155 (53%) Frame = -2 Query: 663 LKAFFGSLYRCLARGARAVLQFYADNVKQTEMLVSFAMKAGFAGGVVIDWPHSSKAKKSY 484 L FF +LY L +G + V QFY N Q + ++ A AGF+GG+V+D P S K KK Y Sbjct: 137 LMRFFNTLYAALKKGGKFVAQFYPKNDDQVDDILQSAKVAGFSGGLVVDDPESKKNKKYY 196 Query: 483 LVLTCGTSSVTSLPKGKGENGEMCXXXXXXXXXXXXXDQTVGTYGRNRSNKRQKVNKKNG 304 LVL+ G P+G+ + ++ V + + +R K K Sbjct: 197 LVLSSGAP-----PQGEEQ---------VNLDGVTMDEENVNL--KKQLRQRLKGGKDKE 240 Query: 303 RGKDWLLRKKEQMRKRGREVPADTKYTGRKRKTRF 199 K ++LRKKE M++RGR+V D+K+TGRKR+ RF Sbjct: 241 SAKSFILRKKELMKRRGRKVAKDSKFTGRKRRHRF 275
>CP46A_HUMAN (Q9Y6A2) Cytochrome p450 46A1 (EC 1.14.13.98) (Cholesterol| 24-hydroxylase) (CH24H) Length = 500 Score = 31.2 bits (69), Expect = 2.9 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = -2 Query: 300 GKDWLLRKKEQMRKRGREVPAD 235 G+DW+ R++E + KRG EVPAD Sbjct: 254 GRDWVQRRREAL-KRGEEVPAD 274
>CP46A_MOUSE (Q9WVK8) Cytochrome p450 46A1 (EC 1.14.13.98) (Cholesterol| 24-hydroxylase) (CH24H) Length = 500 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -2 Query: 330 RQKVNKKNGRGKDWLLRKKEQMRKRGREVPAD 235 R+ + GKDW+ R++E + KRG ++PAD Sbjct: 244 RESIRLLRQVGKDWVQRRREAL-KRGEDMPAD 274 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,728,156 Number of Sequences: 219361 Number of extensions: 1390150 Number of successful extensions: 3672 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3574 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3660 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)