ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd14i14 |
|---|---|
| Clone Library Name | barley_pub |
>EF1G2_ORYSA (Q6YW46) Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma| 2) Length = 418 Score = 218 bits (555), Expect = 6e-57 Identities = 100/113 (88%), Positives = 109/113 (96%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 WFCDYKY +ENTVS+VT+NKVGGFLQRMDLCRKYAFGKMLVIGSE PFKVKGLWLFRG + Sbjct: 306 WFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPE 365 Query: 277 IPEFVMNEVYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 119 IP+FVM+EVYDMELYEWTKVD+SDEAQK+RV AMIEDLEPFEG+SLLDAKCFK Sbjct: 366 IPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGESLLDAKCFK 418
>EF1G1_ORYSA (Q9ZRI7) Elongation factor 1-gamma 1 (EF-1-gamma 1) (eEF-1B gamma| 1) Length = 418 Score = 217 bits (552), Expect = 1e-56 Identities = 99/113 (87%), Positives = 109/113 (96%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 WFCDYKY +ENTVS+VT+NKVGGFLQRMDLCRKYAFGKMLVIGSE PFKVKGLWLFRG + Sbjct: 306 WFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPE 365 Query: 277 IPEFVMNEVYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 119 IP+FVM+EVYDMELYEWTKVD+SDEAQK+RV AMIEDLEPFEG++LLDAKCFK Sbjct: 366 IPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGEALLDAKCFK 418
>EF1G3_ORYSA (Q5Z627) Elongation factor 1-gamma 3 (EF-1-gamma 3) (eEF-1B gamma| 3) Length = 416 Score = 216 bits (551), Expect = 2e-56 Identities = 100/113 (88%), Positives = 107/113 (94%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 WFCDYKY +ENTVS+VT+NKVGGFLQRMDLCRKYAFGKMLVIGS PFKVKGLWLFRGQD Sbjct: 304 WFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSTPPFKVKGLWLFRGQD 363 Query: 277 IPEFVMNEVYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 119 IP+FVM+EVYDMELYEWTKVDLSDEAQK+RV AMIED EPFEG+ LLDAKCFK Sbjct: 364 IPKFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQEPFEGEDLLDAKCFK 416
>EF1G1_ARATH (O04487) Probable elongation factor 1-gamma 1 (EF-1-gamma 1)| (eEF-1B gamma 1) Length = 414 Score = 204 bits (520), Expect = 7e-53 Identities = 92/113 (81%), Positives = 104/113 (92%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 WFCDYKY +EN VS+VTLNKVGGFLQRMDL RKY+FGKML+ GSE PFKVKGLWLFRG + Sbjct: 302 WFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPE 361 Query: 277 IPEFVMNEVYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 119 IP+F+M+EVYDMELYEWTKVD+SDEAQK+RV MIED EPFEG++LLDAKCFK Sbjct: 362 IPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 414
>EF1G2_ARATH (Q9FVT2) Probable elongation factor 1-gamma 2 (EF-1-gamma 2)| (eEF-1B gamma 2) Length = 413 Score = 204 bits (520), Expect = 7e-53 Identities = 92/113 (81%), Positives = 104/113 (92%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 WFCDYKY +EN VS+VTLNKVGGFLQRMDL RKY+FGKML+ GSE PFKVKGLWLFRG + Sbjct: 301 WFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPE 360 Query: 277 IPEFVMNEVYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 119 IP+F+M+EVYDMELYEWTKVD+SDEAQK+RV MIED EPFEG++LLDAKCFK Sbjct: 361 IPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 413
>EF1G_PRUAV (Q9FUM1) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 422 Score = 202 bits (515), Expect = 3e-52 Identities = 94/113 (83%), Positives = 102/113 (90%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 WFC+YKY +ENTVS+VTLNKVGGFLQRMDL RKYAFGKMLVIGSE PFKVKGLWLFRGQ+ Sbjct: 310 WFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQE 369 Query: 277 IPEFVMNEVYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 119 IP FVM E YDMELY WTKVDLSDE QK+RV +IED EPFEG++LLDAKCFK Sbjct: 370 IPPFVMEECYDMELYNWTKVDLSDENQKERVNQVIEDQEPFEGEALLDAKCFK 422
>EF1G_TRYCR (P34715) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 411 Score = 82.8 bits (203), Expect = 4e-16 Identities = 41/113 (36%), Positives = 69/113 (61%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 ++C YKY E+N + ++T N + G+ QRM+ RKYAFG L+IG E + LW+FRG+ Sbjct: 301 FWCRYKYNEDNKMQFMTANLIRGWFQRMEHVRKYAFGVALIIGEERRHDIVALWVFRGRG 360 Query: 277 IPEFVMNEVYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 119 +P ++ +V D EL++W +V AQ++R+ + P + +L+ + FK Sbjct: 361 MPA-IVEDVEDTELFDWEEV-ADVAAQRERITDYLSWEGPTIPRPVLEGRVFK 411
>EF1G_CAEEL (P54412) Probable elongation factor 1-gamma (EF-1-gamma) (eEF-1B| gamma) Length = 398 Score = 76.6 bits (187), Expect = 3e-14 Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 1/114 (0%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W C+YKY E+ T+++++ N + G QR++ +K AF M++ G++ + G+W+++G Sbjct: 285 WKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDK 344 Query: 277 IP-EFVMNEVYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 119 + E + D E Y WTK+D +A KK V + F G+ K FK Sbjct: 345 LAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEGDFGGKKFNQGKIFK 398
>EF1G_CARAU (Q90YC0) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 442 Score = 74.3 bits (181), Expect = 1e-13 Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 4/117 (3%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W+ +Y++ EE T+S+++ N + G QR+D RK AF +++ G+ + G+W+FRGQ+ Sbjct: 327 WYAEYRFPEELTMSFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQE 386 Query: 277 IPEFVMNEVY--DMELYEWTKVDLSDEAQKKRVEAMIEDLEPFE--GQSLLDAKCFK 119 + F ++E + D E Y W K+D+ E K V+ F+ G+S K FK Sbjct: 387 L-AFTLSEDWQIDYESYTWRKLDVDSEECKTMVKEYFAWEGEFKHVGKSFNQGKIFK 442
>EF1G_DROME (Q9NJH0) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 431 Score = 72.4 bits (176), Expect = 5e-13 Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 2/93 (2%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 WF +YKY EE + +++ N + G QR+D RK AF + + G + + G+W++RGQD Sbjct: 317 WFGEYKYNEELSKVFMSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQD 376 Query: 277 IPEFVMNEVY--DMELYEWTKVDLSDEAQKKRV 185 + F ++ + D E+Y+W K+D E KK V Sbjct: 377 L-AFTLSPDWQIDYEVYDWKKLDAKSEETKKLV 408
>EF1G_BRARE (Q6PE25) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 442 Score = 72.0 bits (175), Expect = 7e-13 Identities = 34/106 (32%), Positives = 64/106 (60%), Gaps = 2/106 (1%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W+ +Y++ EE T+++++ N + G QR+D RK AF +++ G+ + G+W+FRGQD Sbjct: 327 WYAEYRFPEELTMAFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQD 386 Query: 277 IPEFVMNEVY--DMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQ 146 + F +++ + D E Y W K+D+ E K M+++ +EG+ Sbjct: 387 L-AFPLSDDWQIDYESYTWRKLDVDSEECK----TMVKEYFAWEGE 427
>EF1GA_XENLA (P26642) Elongation factor 1-gamma-A (EF-1-gamma-A) (eEF-1B| gamma-A) (p47) Length = 436 Score = 70.9 bits (172), Expect = 2e-12 Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 2/94 (2%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W+ +YK+ EE T ++++ N + G QR+D RK F +++ G+ + G+W+FRGQD Sbjct: 321 WYAEYKFPEELTQAFMSCNLITGMFQRLDKLRKTGFASVILFGTNNNSSISGVWVFRGQD 380 Query: 277 IPEFVMNEVY--DMELYEWTKVDLSDEAQKKRVE 182 + F ++E + D E Y W K+D E K V+ Sbjct: 381 L-AFTLSEDWQIDYESYNWRKLDSGSEECKTLVK 413
>EF1GB_XENLA (Q91375) Elongation factor 1-gamma-B (EF-1-gamma-B) (eEF-1B| gamma-B) (p47) Length = 437 Score = 69.7 bits (169), Expect = 3e-12 Identities = 35/114 (30%), Positives = 63/114 (55%), Gaps = 2/114 (1%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W+ +YK+ EE T ++++ N + G QR+D RK AF +++ G+ + G+W+FRG D Sbjct: 322 WYAEYKFPEELTQTFMSCNLITGMFQRLDKLRKTAFASVILFGTNNNSTISGVWVFRGHD 381 Query: 277 IPEFVMNEVY--DMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCF 122 + F ++E + D E Y W K+ E+ + M+++ +EG+ K F Sbjct: 382 L-AFTLSEDWQIDYESYTWRKL----ESDSEECRTMVKEYFAWEGEFKHVGKAF 430
>EF1G_RAT (Q68FR6) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 68.2 bits (165), Expect = 1e-11 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 4/117 (3%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W+ +Y++ EE T ++++ N + G QR+D RK AF +++ G+ + G+W+FRGQD Sbjct: 321 WYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQD 380 Query: 277 IPEFVMNEVY--DMELYEWTKVDLSDEAQKKRVEAMIEDLEPFE--GQSLLDAKCFK 119 + F ++ + D E Y W K+D E + V F+ G+++ K FK Sbjct: 381 L-AFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAVNQGKIFK 436
>EF1G_RABIT (P29694) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 67.8 bits (164), Expect = 1e-11 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 4/117 (3%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W+ +Y++ EE T ++++ N + G QR+D RK AF +++ G+ + G+W+FRGQ+ Sbjct: 321 WYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGIWVFRGQE 380 Query: 277 IPEFVMNEVY--DMELYEWTKVDLSDEAQKKRVEAMIEDLEPFE--GQSLLDAKCFK 119 + F ++ + D E Y W K+D S E + V F+ G++ K FK Sbjct: 381 L-AFPLSPDWQVDYESYTWRKLDPSSEETQTLVREYFAWEGAFQHVGKAFNQGKVFK 436
>EF1G_MOUSE (Q9D8N0) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 66.6 bits (161), Expect = 3e-11 Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 4/117 (3%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W+ +Y++ EE T ++++ N + G QR+D RK AF +++ G+ + G+W+FRGQ+ Sbjct: 321 WYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQE 380 Query: 277 IPEFVMNEVY--DMELYEWTKVDLSDEAQKKRVEAMIEDLEPFE--GQSLLDAKCFK 119 + F ++ + D E Y W K+D E + V F+ G+++ K FK Sbjct: 381 L-AFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGTFQHVGKAVNQGKIFK 436
>EF1G_ARTSA (P12261) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 429 Score = 66.6 bits (161), Expect = 3e-11 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W+ +YKYQ+E Y++ N + G QR++ RK AF + V G + + G+W++RGQD Sbjct: 315 WYSEYKYQDELAKVYMSCNLITGMFQRIEKMRKQAFASVCVFGEDNDSSISGIWVWRGQD 374 Query: 277 IP-EFVMNEVYDMELYEWTKVDLSDEAQKKRV 185 + + + D E Y+W K+D + K V Sbjct: 375 LAFKLSPDWQIDYESYDWKKLDPDAQETKDLV 406
>EF1G_HUMAN (P26641) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 65.9 bits (159), Expect = 5e-11 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W+ +Y++ EE T ++++ N + G QR+D RK AF +++ G+ + G+W+FRGQ+ Sbjct: 321 WYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQE 380 Query: 277 IPEFVMNEVY--DMELYEWTKVDLSDEAQKKRVEAMIEDLEPFE--GQSLLDAKCFK 119 + F ++ + D E Y W K+D E + V F+ G++ K FK Sbjct: 381 L-AFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 436
>EF1G_PIG (Q29387) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| (Fragment) Length = 432 Score = 65.5 bits (158), Expect = 6e-11 Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 4/117 (3%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W+ +Y++ EE T ++++ N + G QR+D RK AF +++ G+ + G+W+FRGQ+ Sbjct: 317 WYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQE 376 Query: 277 IPEFVMNEVY--DMELYEWTKVDLSDEAQKKRVEAMI--EDLEPFEGQSLLDAKCFK 119 + F ++ + D E Y W K+D E + V E G++ K FK Sbjct: 377 L-AFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAYQHVGKAFNQGKIFK 432
>EF1G_SCHPO (P40921) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 409 Score = 63.9 bits (154), Expect = 2e-10 Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 2/115 (1%) Frame = -2 Query: 457 WFCDYKYQEE-NTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQ 281 W DY Y E+ ++T N +GGF QR++ RKY FG +VIG + G ++ +G Sbjct: 297 WKVDYSYPEDLKQPVFMTNNLIGGFFQRLEASRKYIFGCCVVIGENGDNTITGAFVIKGH 356 Query: 280 D-IPEFVMNEVYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 119 D +P F + D Y +TK+D++ K +E +P EG+ + D K K Sbjct: 357 DYVPAF--DVAPDWGSYTFTKLDINKPEDKAFIEDAWAWDKPIEGREVADGKVCK 409
>EF1G2_YEAST (P36008) Elongation factor 1-gamma 2 (EF-1-gamma 2) (Translation| elongation factor 1B gamma 2) (Eukaryotic elongation factor 1Bgamma 2) (eEF1Bgamma 2) Length = 412 Score = 63.5 bits (153), Expect = 2e-10 Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 5/118 (4%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W YKY +E T+++++ N VGGF R+ KY FG ++V G + G + RGQD Sbjct: 297 WKVGYKYNDELTLTFMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQD 356 Query: 277 I-PEFVMNEVYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPF----EGQSLLDAKCFK 119 P F + D E YE+TK+D + E K+ V M +P E + ++D K K Sbjct: 357 FAPAF--DVAPDWESYEYTKLDPTKEEDKEFVNNMWAWDKPVVVNGEDKEIVDGKVLK 412
>EF1G1_YEAST (P29547) Elongation factor 1-gamma 1 (EF-1-gamma 1) (Translation| elongation factor 1B gamma 1) (Eukaryotic elongation factor 1Bgamma 1) (eEF1Bgamma 1) (Calcium and membrane-binding protein 1) (Calcium phospholipid-binding protein) (CPBP) Length = 415 Score = 60.1 bits (144), Expect = 3e-09 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 5/118 (4%) Frame = -2 Query: 457 WFCDYKYQEENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD 278 W YKY +E T+++++ N VGGF R+ KY FG ++V G + G + RGQD Sbjct: 300 WKVTYKYNDELTLTFMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQD 359 Query: 277 -IPEFVMNEVYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPF----EGQSLLDAKCFK 119 +P F + D E Y++ K+D +++ K+ + M +P E + ++D K K Sbjct: 360 YVPAF--DVAPDWESYDYAKLDPTNDDDKEFINNMWAWDKPVSVNGEPKEIVDGKVLK 415
>Y115_ADE02 (P03290) Hypothetical protein E-115| Length = 115 Score = 31.2 bits (69), Expect = 1.3 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 3/79 (3%) Frame = +1 Query: 100 PGSAPLT*STWRPARTAPRTAQGPRSWPQHASSGPHRRG---QPWSTHRAPCHRPRS*QT 270 P S PL T A PR + PR+ P RRG PWS P R ++ + Sbjct: 41 PSSTPLKVCTAPRAAPPPRASCAPRATP--------RRGWTMTPWSNATWPTRRAKT-GS 91 Query: 271 QGCPAHGRATVP*P*RAPQ 327 PA ++ P P R+P+ Sbjct: 92 ASAPAGPASSAPWPARSPE 110
>RPOA2_PYRHO (O93777) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 397 Score = 31.2 bits (69), Expect = 1.3 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 8/55 (14%) Frame = -2 Query: 310 VKGLWLFRGQDIPEFVMNEVYDM-----ELYEWTKVDLS---DEAQKKRVEAMIE 170 +K L +G+D+PE V E+Y+ E Y+ TKV++ DE K+ +A+IE Sbjct: 7 IKSLIEKKGKDLPESVKQELYEKLIKYNEKYKLTKVEVETIIDEVIKEYEKALIE 61
>SSB_SHEHA (P77953) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 226 Score = 30.8 bits (68), Expect = 1.7 Identities = 21/73 (28%), Positives = 31/73 (42%) Frame = +1 Query: 136 PARTAPRTAQGPRSWPQHASSGPHRRGQPWSTHRAPCHRPRS*QTQGCPAHGRATVP*P* 315 P + AP+ P+ PQ A P +P S + P + Q+QG A P P Sbjct: 135 PQQQAPQQGYAPK--PQSAPQQPAYAPKPQSAPQQPAQQQGGYQSQGQQPQAPAYAPKPQ 192 Query: 316 RAPQNQSRASCQK 354 APQ + + Q+ Sbjct: 193 AAPQQRPAPAPQQ 205
>APTX_DROME (Q8MSG8) Protein aprataxin-like| Length = 662 Score = 30.0 bits (66), Expect = 2.9 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 136 PARTAPRTAQGPRSWPQHASSGPHRRGQPWSTHRAPCHRPRS 261 P R P + + P H SGP PW+ R PCH+ ++ Sbjct: 500 PFRNTPHLNRQSQK-PPHPRSGPRGPMAPWTGPRFPCHQQQN 540
>P320_TRYBB (P21787) Microtubule-associated protein P320 (Fragment)| Length = 290 Score = 29.6 bits (65), Expect = 3.8 Identities = 14/54 (25%), Positives = 24/54 (44%) Frame = +2 Query: 236 ELHVIDLVHDKLRDVLPTEEPQSLDLEGRLRTNHEHLAKSIFAAQIHPLQEPAD 397 E H + H+ + + P+E Q + + TN H+ +S F H +P D Sbjct: 136 ESHFLTTTHEAYKPIDPSEYRQKRTVGEEVTTNMRHVDESHFLTTTHEAYKPID 189 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/60 (23%), Positives = 27/60 (45%) Frame = +2 Query: 218 NLGPLIELHVIDLVHDKLRDVLPTEEPQSLDLEGRLRTNHEHLAKSIFAAQIHPLQEPAD 397 N+ + E H + H+ + + P+E Q + + T+ H+ +S F H +P D Sbjct: 168 NMRHVDESHFLTTTHEAYKPIDPSEYRQKRTVGEEVTTDMRHVDESHFLTTTHEAYKPID 227
>YOT5_CAEEL (P34651) Hypothetical protein ZK632.5| Length = 824 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +2 Query: 245 VIDLVHDKLRDVLPTEEPQSLDLEGRLRTNHEHLAKSIFA 364 V+ ++H L +VL T ++L E RLR H+ +IFA Sbjct: 640 VLRMLHTALNEVLETRNSETLTREPRLRYAFFHMNTTIFA 679
>SI1L1_MOUSE (Q8C0T5) Signal-induced proliferation-associated 1-like protein 1| Length = 1782 Score = 29.3 bits (64), Expect = 5.0 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 5 P*VTSKLFQKRPTVSTLNFKS*IGSLPPPSRSQAVLRSLEALGVQQGLPLER 160 P V S+L + P S LN G +PPP R+ + RS+ + G PLER Sbjct: 1079 PQVPSQL--QSPMTSRLNAGKGDGKMPPPERAANIPRSISS----DGRPLER 1124
>AROC_STRT2 (Q5M555) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 388 Score = 29.3 bits (64), Expect = 5.0 Identities = 22/62 (35%), Positives = 28/62 (45%) Frame = +2 Query: 224 GPLIELHVIDLVHDKLRDVLPTEEPQSLDLEGRLRTNHEHLAKSIFAAQIHPLQEPADLV 403 G I LHVI+ H K D++ E D+E RL+T + HP ADLV Sbjct: 69 GAPITLHVINKDHQKWLDIMAVE-----DIEDRLKTKRK---------ITHPRPGHADLV 114 Query: 404 QG 409 G Sbjct: 115 GG 116
>AROC_STRT1 (Q5M0L9) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 388 Score = 29.3 bits (64), Expect = 5.0 Identities = 22/62 (35%), Positives = 28/62 (45%) Frame = +2 Query: 224 GPLIELHVIDLVHDKLRDVLPTEEPQSLDLEGRLRTNHEHLAKSIFAAQIHPLQEPADLV 403 G I LHVI+ H K D++ E D+E RL+T + HP ADLV Sbjct: 69 GAPITLHVINKDHQKWLDIMAVE-----DIEDRLKTKRK---------ITHPRPGHADLV 114 Query: 404 QG 409 G Sbjct: 115 GG 116
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 29.3 bits (64), Expect = 5.0 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 2/104 (1%) Frame = +1 Query: 136 PARTAPRTAQGPRSWPQHASSGPHRRGQPWSTHRAPCHRP--RS*QTQGCPAHGRATVP* 309 P AP+T+ P + ASS P RR P +P RP R +T +A P Sbjct: 686 PRPRAPQTSSSPPPVRRGASSSPQRRQSP-----SPSTRPIRRVSRTPEPKKIKKAASP- 739 Query: 310 P*RAPQNQSRASCQKHICGTDPSAAGTRRPCSG*RRTQCSLPGT 441 +PQ+ R S + + G+ AA ++P + Q P T Sbjct: 740 ---SPQSVRRVSSSRSVSGSPEPAA--KKPPAPPSPVQSQSPST 778
>RPOA2_PYRAB (Q9V113) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 397 Score = 29.3 bits (64), Expect = 5.0 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 8/55 (14%) Frame = -2 Query: 310 VKGLWLFRGQDIPEFVMNEVYDM-----ELYEWTKVDLS---DEAQKKRVEAMIE 170 +K L +G+D+PE V E+Y+ E Y+ TK ++ DE K+ A++E Sbjct: 7 IKSLIEKKGKDLPESVKQELYEKLIKYNEKYKLTKAEVETIIDEVVKEYERALVE 61
>AGRP_MOUSE (P56473) Agouti-related protein precursor| Length = 131 Score = 29.3 bits (64), Expect = 5.0 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -2 Query: 226 TKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK*AEHCLG 98 T D ++E ++ EA+ E L+P +S +C + E CLG Sbjct: 53 TTADRAEEVLLQKAEALAEVLDPQNRESRSPRRCVRLHESCLG 95
>PO11_SCICO (Q03277) Retrovirus-related Pol polyprotein from type-1| retrotransposable element R1 (Retrovirus-related Pol polyprotein from type I retrotransposable element R1) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease] (Fragment) Length = 1004 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = -2 Query: 397 VGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMELYEW 227 +G +LQ M+ R +++G +A V LW +G+++ +NE + L EW Sbjct: 74 LGPYLQYMENVRVKCGNTYMIMGMDAN-AVSPLWFSKGENLGRGRLNEANGLLLEEW 129
>SI1L1_HUMAN (O43166) Signal-induced proliferation-associated 1-like protein 1| (High-risk human papilloma viruses E6 oncoproteins targeted protein 1) (E6-targeted protein 1) Length = 1803 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +2 Query: 38 PTVSTLNFKS*IGSLPPPSRSQAVLRSLEALGVQQGLPLER 160 P S LN G +PPP R+ + RS+ + G PLER Sbjct: 1088 PMTSRLNAGKGDGKMPPPERAANIPRSISS----DGRPLER 1124
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 28.5 bits (62), Expect = 8.6 Identities = 26/97 (26%), Positives = 34/97 (35%), Gaps = 20/97 (20%) Frame = +1 Query: 169 PRSWPQHASSG-------PHRRGQPWSTHRAPCHRPRS*QTQGCPAHGRATVP*P*RAPQ 327 PR WP+ G P G WS AP R+ C A A P P A Sbjct: 148 PRRWPRAGRRGRRAGACKPSCAGAAWSARGAPLCSYRTSCAGSCGAR-TAPTPAPTCASP 206 Query: 328 NQSRASCQKH-------------ICGTDPSAAGTRRP 399 + + +SC + CG P+AA +P Sbjct: 207 SAAASSCCRRRRACSSPTTAWSGACGAGPTAATAAQP 243
>RPOA2_PYRFU (Q8U0M5) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 397 Score = 28.5 bits (62), Expect = 8.6 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 8/59 (13%) Frame = -2 Query: 310 VKGLWLFRGQDIPEFVMNEVYDM-----ELYEWTKVDLS---DEAQKKRVEAMIEDLEP 158 +K L +G ++PE V +E+Y+ E Y+ TK ++ D+ K+ A++E EP Sbjct: 7 IKSLIEKKGANLPENVKSELYEKLKKYNEKYKLTKAEIEAIIDDVVKEYERALVEPGEP 65 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,717,963 Number of Sequences: 219361 Number of extensions: 1314839 Number of successful extensions: 4347 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 4162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4335 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
