ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14i08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466542.1| Oryza sativa (japonica cultivar-group), mRNA 256 8e-65
2dbj|AK101163.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
3gb|BT017914.1| Zea mays clone EL01N0518E07.c mRNA sequence 182 1e-42
4gb|BT024009.1| Zea mays clone EL01N0402C05 mRNA sequence 182 1e-42
5gb|AY110339.1| Zea mays CL6346_1 mRNA sequence 174 2e-40
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
7dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
8gb|AC153764.3| Loxodonta africana clone VMRC15-169D19, complete ... 48 0.038
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
10dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
11dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
12dbj|AK103383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
13gb|AC024200.2| Caenorhabditis elegans cosmid Y71F9AL, complete s... 44 0.59
14ref|NM_058665.3| Caenorhabditis elegans Y71F9AL.16 (actin) mRNA,... 44 0.59
15gb|AC024851.1|AC024851 Caenorhabditis elegans clone Y71F9AL, com... 44 0.59
16gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosom... 42 2.3
17gb|BC003445.1| Mus musculus REX2, RNA exonuclease 2 homolog (S. ... 42 2.3
18gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, co... 42 2.3
19ref|XM_753779.1| Ustilago maydis 521 hypothetical protein (UM027... 42 2.3
20emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 42 2.3
21dbj|AK150287.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 2.3
22dbj|AK172641.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 2.3
23dbj|AK171619.1| Mus musculus B6-derived CD11 +ve dendritic cells... 42 2.3
24emb|BX072533.17| Zebrafish DNA sequence from clone CH211-158C3 i... 42 2.3
25ref|NM_204307.1| Gallus gallus ARP3 actin-related protein 3 homo... 42 2.3
26gb|AF288600.1| Gallus gallus actin related protein 3 mRNA, compl... 42 2.3
27dbj|AK007731.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 42 2.3
28gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, ... 42 2.3
29dbj|AK206023.1| Mus musculus cDNA, clone:Y2G0103I08, strand:minu... 42 2.3
30gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone... 42 2.3
31emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chrom... 42 2.3
32ref|NM_024233.2| Mus musculus REX2, RNA exonuclease 2 homolog (S... 42 2.3
33gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, com... 40 9.2
34gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, co... 40 9.2
35gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, com... 40 9.2
36gb|AC102661.7| Mus musculus chromosome 3, clone RP23-114K16, com... 40 9.2
37gb|AC102460.13| Mus musculus chromosome 3, clone RP24-318G1, com... 40 9.2
38gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 9.2
39gb|AC035247.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 9.2
40gb|BT013825.1| Lycopersicon esculentum clone 132749R, mRNA sequence 40 9.2
41gb|AC158215.3| Mus musculus chromosome 7, clone RP24-180E12, com... 40 9.2
42gb|AY812618.1| Schistosoma japonicum SJCHGC05551 protein mRNA, p... 40 9.2
43gb|AC022699.11| Mus musculus chromosome 10, clone RP23-107I8, co... 40 9.2
44gb|AC153572.13| Mus musculus 10 BAC RP23-187O15 (Roswell Park Ca... 40 9.2
45gb|AC163664.3| Mus musculus BAC clone RP23-310P18 from chromosom... 40 9.2
46emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chr... 40 9.2
47gb|BC086420.1| Rattus norvegicus REX2, RNA exonuclease 2 homolog... 40 9.2
48gb|AC141900.3| Mus musculus BAC clone RP23-47I1 from chromosome ... 40 9.2
49gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosom... 40 9.2
50gb|DQ493927.1| Homo sapiens fibroblast growth factor receptor 2 ... 40 9.2
51gb|AC146195.3| Pan troglodytes BAC clone RP43-25F5 from 7, compl... 40 9.2
52gb|AC099798.4| Homo sapiens BAC clone RP11-559E21 from 7, comple... 40 9.2
53ref|NM_001008326.1| Rattus norvegicus REX2, RNA exonuclease 2 ho... 40 9.2
54gb|AC102472.7| Mus musculus, clone RP24-380G1, complete sequence 40 9.2
55gb|AC164010.2| Mus musculus chromosome 18, clone RP24-391C15, co... 40 9.2
56dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
57gb|AC009988.12| Homo sapiens chromosome 10 clone RP11-62L18, com... 40 9.2
58gb|AC026395.11| Homo sapiens chromosome 10 clone RP11-45D20, com... 40 9.2
59gb|AF410480.1|AF410480S1 Homo sapiens keratinocyte growth factor... 40 9.2
60gb|AC092027.3| Homo sapiens BAC clone RP11-438N22 from 7, comple... 40 9.2
61gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 1... 40 9.2
62gb|AC155940.6| Mus musculus 10 BAC RP24-94O5 (Roswell Park Cance... 40 9.2
63dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
64emb|BX530092.15| Mouse DNA sequence from clone RP23-45N17 on chr... 40 9.2
65gb|AC107672.6| Mus musculus chromosome 1, clone RP24-95P4, compl... 40 9.2
66gb|AC087422.1|AC087422 Caenorhabditis briggsae cosmid CB033P12, ... 40 9.2
67dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
68gb|AC123953.4| Mus musculus chromosome UL clone RP23-234O13, com... 40 9.2
69dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
70dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
71gb|AF233344.1|AF233344 Homo sapiens fibroblast growth factor rec... 40 9.2
72dbj|AK107858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
73gb|AC167817.4| Mus musculus BAC clone RP23-146N9 from chromosome... 40 9.2
74gb|AC136376.3| Mus musculus BAC clone RP23-243M12 from 14, compl... 40 9.2
75gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map ... 40 9.2
76emb|AL928705.5| Mouse DNA sequence from clone RP23-200K17 on chr... 40 9.2 
>ref|XM_466542.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1941

 Score =  256 bits (129), Expect = 8e-65
 Identities = 195/217 (89%)
 Strand = Plus / Minus

                                                                        
Query: 455  agtacatccctttgaaaacgggattcgatcggcagatgcttgcaccgtactcttcatact 514
            ||||||||||||||||||| |||||||  |||||||||||||| || |||||||||||||
Sbjct: 1602 agtacatccctttgaaaacaggattcgtccggcagatgcttgcgccatactcttcatact 1543

                                                                        
Query: 515  ctgcttttgtgtggcaagcctcgtagaattctgctgtagatgcaagcaccgatccaccaa 574
            ||||||||||||||||||||||||||||||| || ||||| |||||||| || |||||||
Sbjct: 1542 ctgcttttgtgtggcaagcctcgtagaattcagcggtagaggcaagcacagaaccaccaa 1483

                                                                        
Query: 575  accaaaccgcatatctttgaattggatgactaaccacatttacttccacgggttgagcct 634
            |||| || |||||||||||||| ||||| ||||| ||||||||||| |  ||||| ||||
Sbjct: 1482 accagacagcatatctttgaataggatggctaactacatttacttctataggttgggcct 1423

                                                 
Query: 635  tggcatctccaccaagccgagcattagatgcacggac 671
            | |||||||||||||| ||||||||||||||| ||||
Sbjct: 1422 ttgcatctccaccaagtcgagcattagatgcaaggac 1386
to top
>dbj|AK101163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028A09, full
            insert sequence
          Length = 1941

 Score =  248 bits (125), Expect = 2e-62
 Identities = 194/217 (89%)
 Strand = Plus / Minus

                                                                        
Query: 455  agtacatccctttgaaaacgggattcgatcggcagatgcttgcaccgtactcttcatact 514
            ||||||||||||||||||| | |||||  |||||||||||||| || |||||||||||||
Sbjct: 1602 agtacatccctttgaaaacagtattcgtccggcagatgcttgcgccatactcttcatact 1543

                                                                        
Query: 515  ctgcttttgtgtggcaagcctcgtagaattctgctgtagatgcaagcaccgatccaccaa 574
            ||||||||||||||||||||||||||||||| || ||||| |||||||| || |||||||
Sbjct: 1542 ctgcttttgtgtggcaagcctcgtagaattcagcggtagaggcaagcacagaaccaccaa 1483

                                                                        
Query: 575  accaaaccgcatatctttgaattggatgactaaccacatttacttccacgggttgagcct 634
            |||| || |||||||||||||| ||||| ||||| ||||||||||| |  ||||| ||||
Sbjct: 1482 accagacagcatatctttgaataggatggctaactacatttacttctataggttgggcct 1423

                                                 
Query: 635  tggcatctccaccaagccgagcattagatgcacggac 671
            | |||||||||||||| ||||||||||||||| ||||
Sbjct: 1422 ttgcatctccaccaagtcgagcattagatgcaaggac 1386
to top
>gb|BT017914.1| Zea mays clone EL01N0518E07.c mRNA sequence
          Length = 1182

 Score =  182 bits (92), Expect = 1e-42
 Identities = 149/168 (88%)
 Strand = Plus / Minus

                                                                       
Query: 453 tcagtacatccctttgaaaacgggattcgatcggcagatgcttgcaccgtactcttcata 512
           |||||||||||||||||| || ||||||| |||||||||||| ||||||||||| || ||
Sbjct: 840 tcagtacatccctttgaagacaggattcgttcggcagatgctggcaccgtactcctcgta 781

                                                                       
Query: 513 ctctgcttttgtgtggcaagcctcgtagaattctgctgtagatgcaagcaccgatccacc 572
           |||||| |||||||||||||||||||||||||| || || || |||||||| || |||||
Sbjct: 780 ctctgcctttgtgtggcaagcctcgtagaattcggcagttgaagcaagcacagagccacc 721

                                                           
Query: 573 aaaccaaaccgcatatctttgaattggatgactaaccacatttacttc 620
           |||||| ||||||||||| || ||||||||||| ||||| || |||||
Sbjct: 720 aaaccataccgcatatctctggattggatgactgaccacgttcacttc 673
to top
>gb|BT024009.1| Zea mays clone EL01N0402C05 mRNA sequence
          Length = 1828

 Score =  182 bits (92), Expect = 1e-42
 Identities = 149/168 (88%)
 Strand = Plus / Minus

                                                                        
Query: 453  tcagtacatccctttgaaaacgggattcgatcggcagatgcttgcaccgtactcttcata 512
            |||||||||||||||||| || ||||||| |||||||||||| ||||||||||| || ||
Sbjct: 1505 tcagtacatccctttgaagacaggattcgttcggcagatgctggcaccgtactcctcgta 1446

                                                                        
Query: 513  ctctgcttttgtgtggcaagcctcgtagaattctgctgtagatgcaagcaccgatccacc 572
            |||||| |||||||||||||||||||||||||| || || || |||||||| || |||||
Sbjct: 1445 ctctgcctttgtgtggcaagcctcgtagaattcggcagttgaagcaagcacagagccacc 1386

                                                            
Query: 573  aaaccaaaccgcatatctttgaattggatgactaaccacatttacttc 620
            |||||| ||||||||||| || ||||||||||| ||||| || |||||
Sbjct: 1385 aaaccataccgcatatctctggattggatgactgaccacgttcacttc 1338
to top
>gb|AY110339.1| Zea mays CL6346_1 mRNA sequence
          Length = 1174

 Score =  174 bits (88), Expect = 2e-40
 Identities = 148/168 (88%)
 Strand = Plus / Minus

                                                                       
Query: 453 tcagtacatccctttgaaaacgggattcgatcggcagatgcttgcaccgtactcttcata 512
           |||||||||||||||||| || ||||||| |||||||||||| ||||||||||| || ||
Sbjct: 826 tcagtacatccctttgaagacaggattcgttcggcagatgctggcaccgtactcctcgta 767

                                                                       
Query: 513 ctctgcttttgtgtggcaagcctcgtagaattctgctgtagatgcaagcaccgatccacc 572
           |||||| |||||||||||||||||||||||||| || || || |||||||| || |||||
Sbjct: 766 ctctgcctttgtgtggcaagcctcgtagaattcggcggttgaagcaagcacagagccacc 707

                                                           
Query: 573 aaaccaaaccgcatatctttgaattggatgactaaccacatttacttc 620
           |||||| ||||||||||| || || |||||||| ||||| || |||||
Sbjct: 706 aaaccataccgcatatctctggatcggatgactgaccacgttcacttc 659
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  121 bits (61), Expect = 3e-24
 Identities = 76/81 (93%)
 Strand = Plus / Minus

                                                                            
Query: 455      agtacatccctttgaaaacgggattcgatcggcagatgcttgcaccgtactcttcatact 514
                ||||||||||||||||||| |||||||  |||||||||||||| || |||||||||||||
Sbjct: 23201102 agtacatccctttgaaaacaggattcgtccggcagatgcttgcgccatactcttcatact 23201043

                                     
Query: 515      ctgcttttgtgtggcaagcct 535
                |||||||||||||||||||||
Sbjct: 23201042 ctgcttttgtgtggcaagcct 23201022



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 78/88 (88%)
 Strand = Plus / Minus

                                                                            
Query: 533      cctcgtagaattctgctgtagatgcaagcaccgatccaccaaaccaaaccgcatatcttt 592
                ||||||||||||| || ||||| |||||||| || ||||||||||| || ||||||||||
Sbjct: 23200830 cctcgtagaattcagcggtagaggcaagcacagaaccaccaaaccagacagcatatcttt 23200771

                                            
Query: 593      gaattggatgactaaccacatttacttc 620
                |||| ||||| ||||| |||||||||||
Sbjct: 23200770 gaataggatggctaactacatttacttc 23200743



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                        
Query: 632      ccttggcatctccaccaagccgagcattagatgcacggac 671
                |||| |||||||||||||| ||||||||||||||| ||||
Sbjct: 23200612 cctttgcatctccaccaagtcgagcattagatgcaaggac 23200573
to top
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1568_B05
          Length = 115325

 Score =  121 bits (61), Expect = 3e-24
 Identities = 76/81 (93%)
 Strand = Plus / Minus

                                                                         
Query: 455   agtacatccctttgaaaacgggattcgatcggcagatgcttgcaccgtactcttcatact 514
             ||||||||||||||||||| |||||||  |||||||||||||| || |||||||||||||
Sbjct: 58333 agtacatccctttgaaaacaggattcgtccggcagatgcttgcgccatactcttcatact 58274

                                  
Query: 515   ctgcttttgtgtggcaagcct 535
             |||||||||||||||||||||
Sbjct: 58273 ctgcttttgtgtggcaagcct 58253



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 78/88 (88%)
 Strand = Plus / Minus

                                                                         
Query: 533   cctcgtagaattctgctgtagatgcaagcaccgatccaccaaaccaaaccgcatatcttt 592
             ||||||||||||| || ||||| |||||||| || ||||||||||| || ||||||||||
Sbjct: 58061 cctcgtagaattcagcggtagaggcaagcacagaaccaccaaaccagacagcatatcttt 58002

                                         
Query: 593   gaattggatgactaaccacatttacttc 620
             |||| ||||| ||||| |||||||||||
Sbjct: 58001 gaataggatggctaactacatttacttc 57974



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 632   ccttggcatctccaccaagccgagcattagatgcacggac 671
             |||| |||||||||||||| ||||||||||||||| ||||
Sbjct: 57843 cctttgcatctccaccaagtcgagcattagatgcaaggac 57804
to top
>gb|AC153764.3| Loxodonta africana clone VMRC15-169D19, complete sequence
          Length = 147688

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 144   ttttctaaagaaaaatacaacagc 167
             ||||||||||||||||||||||||
Sbjct: 25575 ttttctaaagaaaaatacaacagc 25552
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 453     tcagtacatccctttgaaaacgg 475
               |||||||||||||||||||||||
Sbjct: 1603702 tcagtacatccctttgaaaacgg 1603724
to top
>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1163_G08
          Length = 150676

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 453    tcagtacatccctttgaaaacgg 475
              |||||||||||||||||||||||
Sbjct: 131190 tcagtacatccctttgaaaacgg 131212
to top
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0582D05
          Length = 150483

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 453  tcagtacatccctttgaaaacgg 475
            |||||||||||||||||||||||
Sbjct: 3202 tcagtacatccctttgaaaacgg 3224
to top
>dbj|AK103383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127G06, full
            insert sequence
          Length = 1855

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 453  tcagtacatccctttgaaaacgg 475
            |||||||||||||||||||||||
Sbjct: 1565 tcagtacatccctttgaaaacgg 1543
to top
>gb|AC024200.2| Caenorhabditis elegans cosmid Y71F9AL, complete sequence
          Length = 68145

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 565   gatccaccaaaccaaaccgcatatct 590
             ||||| ||||||||||||||||||||
Sbjct: 25801 gatcctccaaaccaaaccgcatatct 25826
to top
>ref|NM_058665.3| Caenorhabditis elegans Y71F9AL.16 (actin) mRNA, complete cds
          Length = 1601

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 565  gatccaccaaaccaaaccgcatatct 590
            ||||| ||||||||||||||||||||
Sbjct: 1171 gatcctccaaaccaaaccgcatatct 1146
to top
>gb|AC024851.1|AC024851 Caenorhabditis elegans clone Y71F9AL, complete sequence
          Length = 67345

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 565   gatccaccaaaccaaaccgcatatct 590
             ||||| ||||||||||||||||||||
Sbjct: 25801 gatcctccaaaccaaaccgcatatct 25826
to top
>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence
          Length = 215980

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    agcaccttttctaaagaaaaa 158
              |||||||||||||||||||||
Sbjct: 102936 agcaccttttctaaagaaaaa 102916
to top
>gb|BC003445.1| Mus musculus REX2, RNA exonuclease 2 homolog (S. cerevisiae), mRNA
           (cDNA clone MGC:6864 IMAGE:2651110), complete cds
          Length = 1023

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 138 agcaccttttctaaagaaaaa 158
           |||||||||||||||||||||
Sbjct: 785 agcaccttttctaaagaaaaa 805
to top
>gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, complete sequence
          Length = 181915

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 516   tgcttttgtgtggcaagcctc 536
             |||||||||||||||||||||
Sbjct: 78643 tgcttttgtgtggcaagcctc 78663
to top
>ref|XM_753779.1| Ustilago maydis 521 hypothetical protein (UM02725.1) partial mRNA
          Length = 3807

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 183  aggcaccgccagcgccatccg 203
            |||||||||||||||||||||
Sbjct: 3644 aggcaccgccagcgccatccg 3664
to top
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
               hansenii
          Length = 2037969

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 258     tatagtatacaaaagatatattgac 282
               |||||||||||||| ||||||||||
Sbjct: 1089750 tatagtatacaaaacatatattgac 1089774
to top
>dbj|AK150287.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830001J05 product:small
           fragment nuclease, full insert sequence
          Length = 991

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 138 agcaccttttctaaagaaaaa 158
           |||||||||||||||||||||
Sbjct: 765 agcaccttttctaaagaaaaa 785
to top
>dbj|AK172641.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830223B02 product:small fragment
           nuclease, full insert sequence
          Length = 1053

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 138 agcaccttttctaaagaaaaa 158
           |||||||||||||||||||||
Sbjct: 827 agcaccttttctaaagaaaaa 847
to top
>dbj|AK171619.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730320E20
           product:small fragment nuclease, full insert sequence
          Length = 978

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 138 agcaccttttctaaagaaaaa 158
           |||||||||||||||||||||
Sbjct: 752 agcaccttttctaaagaaaaa 772
to top
>emb|BX072533.17| Zebrafish DNA sequence from clone CH211-158C3 in linkage group 15,
             complete sequence
          Length = 183704

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 56    agccacaccagcccacccaca 76
             |||||||||||||||||||||
Sbjct: 68222 agccacaccagcccacccaca 68202
to top
>ref|NM_204307.1| Gallus gallus ARP3 actin-related protein 3 homolog (yeast) (ACTR3),
            mRNA
          Length = 1682

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 565  gatccaccaaaccaaaccgcatatctttg 593
            ||||| ||||||||||| |||||||||||
Sbjct: 1225 gatcctccaaaccaaacggcatatctttg 1197
to top
>gb|AF288600.1| Gallus gallus actin related protein 3 mRNA, complete cds
          Length = 1682

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 565  gatccaccaaaccaaaccgcatatctttg 593
            ||||| ||||||||||| |||||||||||
Sbjct: 1225 gatcctccaaaccaaacggcatatctttg 1197
to top
>dbj|AK007731.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810038D15
           product:OLIGORIBONUCLEASE, MITOCHONDRIAL PRECURSOR (EC
           3.1.-.-) (SMALL FRAGMENT NUCLEASE) (CGI-114) homolog
           [Homo sapiens], full insert sequence
          Length = 1077

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 138 agcaccttttctaaagaaaaa 158
           |||||||||||||||||||||
Sbjct: 851 agcaccttttctaaagaaaaa 871
to top
>gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 324604

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 516   tgcttttgtgtggcaagcctc 536
             |||||||||||||||||||||
Sbjct: 79758 tgcttttgtgtggcaagcctc 79778
to top
>dbj|AK206023.1| Mus musculus cDNA, clone:Y2G0103I08, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000034524, based on BLAT search
          Length = 156

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 138 agcaccttttctaaagaaaaa 158
           |||||||||||||||||||||
Sbjct: 37  agcaccttttctaaagaaaaa 57
to top
>gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone rp23-327i21, complete
              sequence
          Length = 218889

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     acaccagcccacccacaaaaa 80
              |||||||||||||||||||||
Sbjct: 163110 acaccagcccacccacaaaaa 163090
to top
>emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chromosome 9, complete
              sequence
          Length = 228508

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    agcaccttttctaaagaaaaa 158
              |||||||||||||||||||||
Sbjct: 228016 agcaccttttctaaagaaaaa 227996
to top
>ref|NM_024233.2| Mus musculus REX2, RNA exonuclease 2 homolog (S. cerevisiae)
           (Rexo2), mRNA
          Length = 1077

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 138 agcaccttttctaaagaaaaa 158
           |||||||||||||||||||||
Sbjct: 851 agcaccttttctaaagaaaaa 871
to top
>gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, complete sequence
          Length = 183724

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    acaccagcccacccacaaaa 79
             ||||||||||||||||||||
Sbjct: 96820 acaccagcccacccacaaaa 96801
to top
>gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, complete sequence
          Length = 147518

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     acaccagcccacccacaaaa 79
              ||||||||||||||||||||
Sbjct: 128170 acaccagcccacccacaaaa 128151
to top
>gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, complete sequence
          Length = 199827

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    acaccagcccacccacaaaa 79
             ||||||||||||||||||||
Sbjct: 82277 acaccagcccacccacaaaa 82258
to top
>gb|AC102661.7| Mus musculus chromosome 3, clone RP23-114K16, complete sequence
          Length = 176493

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     acaccagcccacccacaaaa 79
              ||||||||||||||||||||
Sbjct: 147714 acaccagcccacccacaaaa 147733
to top
>gb|AC102460.13| Mus musculus chromosome 3, clone RP24-318G1, complete sequence
          Length = 197362

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    acaccagcccacccacaaaa 79
             ||||||||||||||||||||
Sbjct: 11389 acaccagcccacccacaaaa 11408
to top
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 639     atctccaccaagccgagcat 658
               ||||||||||||||||||||
Sbjct: 1278585 atctccaccaagccgagcat 1278566
to top
>gb|AC035247.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-108D4, complete
              sequence
          Length = 204935

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     acaccagcccacccacaaaa 79
              ||||||||||||||||||||
Sbjct: 163559 acaccagcccacccacaaaa 163578
to top
>gb|BT013825.1| Lycopersicon esculentum clone 132749R, mRNA sequence
          Length = 2205

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 71/88 (80%)
 Strand = Plus / Minus

                                                                        
Query: 571  ccaaaccaaaccgcatatctttgaattggatgactaaccacatttacttccacgggttga 630
            ||||||||||| ||| |||| || || ||||  || |||||||| ||||| || ||||| 
Sbjct: 1482 ccaaaccaaactgcacatctctggataggattgctgaccacattcacttcaactggttgt 1423

                                        
Query: 631  gccttggcatctccaccaagccgagcat 658
            || ||| ||| |||||| | ||||||||
Sbjct: 1422 gctttgacatttccacctaaccgagcat 1395
to top
>gb|AC158215.3| Mus musculus chromosome 7, clone RP24-180E12, complete sequence
          Length = 156342

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     acaccagcccacccacaaaa 79
              ||||||||||||||||||||
Sbjct: 130590 acaccagcccacccacaaaa 130571
to top
>gb|AY812618.1| Schistosoma japonicum SJCHGC05551 protein mRNA, partial cds
          Length = 1462

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 556  gcaagcaccgatccaccaaaccaaaccgcata 587
            ||||| || ||||||||||||||||| |||||
Sbjct: 1183 gcaagtactgatccaccaaaccaaacagcata 1152
to top
>gb|AC022699.11| Mus musculus chromosome 10, clone RP23-107I8, complete sequence
          Length = 225763

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    acaccagcccacccacaaaa 79
             ||||||||||||||||||||
Sbjct: 43298 acaccagcccacccacaaaa 43279
to top
>gb|AC153572.13| Mus musculus 10 BAC RP23-187O15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 210950

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     acaccagcccacccacaaaa 79
              ||||||||||||||||||||
Sbjct: 151246 acaccagcccacccacaaaa 151265
to top
>gb|AC163664.3| Mus musculus BAC clone RP23-310P18 from chromosome 14, complete sequence
          Length = 221930

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 275    atattgacgaaatgttgtttatct 298
              |||||||| |||||||||||||||
Sbjct: 174687 atattgactaaatgttgtttatct 174664
to top
>emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chromosome 16, complete
             sequence
          Length = 212903

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    acaccagcccacccacaaaa 79
             ||||||||||||||||||||
Sbjct: 48362 acaccagcccacccacaaaa 48343
to top
>gb|BC086420.1| Rattus norvegicus REX2, RNA exonuclease 2 homolog (S. cerevisiae),
           mRNA (cDNA clone MGC:105914 IMAGE:7300740), complete cds
          Length = 1208

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 gcaccttttctaaagaaaaa 158
           ||||||||||||||||||||
Sbjct: 949 gcaccttttctaaagaaaaa 968
to top
>gb|AC141900.3| Mus musculus BAC clone RP23-47I1 from chromosome 12, complete sequence
          Length = 145868

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    acaccagcccacccacaaaa 79
             ||||||||||||||||||||
Sbjct: 73260 acaccagcccacccacaaaa 73241
to top
>gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosome 5, complete sequence
          Length = 193210

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    gatgtatagtatacaaaaga 273
              ||||||||||||||||||||
Sbjct: 129939 gatgtatagtatacaaaaga 129920
to top
>gb|DQ493927.1| Homo sapiens fibroblast growth factor receptor 2
           (bacteria-expressed kinase, keratinocyte growth factor
           receptor, craniofacial dysostosis 1, Crouzon syndrome,
           Pfeiffer syndrome, Jackson-Weiss syndrome) (FGFR2) gene,
           complete cds
          Length = 122913

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 accttttctaaagaaaaata 160
           ||||||||||||||||||||
Sbjct: 808 accttttctaaagaaaaata 827
to top
>gb|AC146195.3| Pan troglodytes BAC clone RP43-25F5 from 7, complete sequence
          Length = 170968

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 513  ctctgcttttgtgtggcaag 532
            ||||||||||||||||||||
Sbjct: 2337 ctctgcttttgtgtggcaag 2356
to top
>gb|AC099798.4| Homo sapiens BAC clone RP11-559E21 from 7, complete sequence
          Length = 131328

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 513  ctctgcttttgtgtggcaag 532
            ||||||||||||||||||||
Sbjct: 4331 ctctgcttttgtgtggcaag 4350
to top
>ref|NM_001008326.1| Rattus norvegicus REX2, RNA exonuclease 2 homolog (S. cerevisiae)
           (Rexo2), mRNA
          Length = 1208

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 gcaccttttctaaagaaaaa 158
           ||||||||||||||||||||
Sbjct: 949 gcaccttttctaaagaaaaa 968
to top
>gb|AC102472.7| Mus musculus, clone RP24-380G1, complete sequence
          Length = 187010

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     acaccagcccacccacaaaa 79
              ||||||||||||||||||||
Sbjct: 172455 acaccagcccacccacaaaa 172436
to top
>gb|AC164010.2| Mus musculus chromosome 18, clone RP24-391C15, complete sequence
          Length = 162585

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    acaccagcccacccacaaaa 79
             ||||||||||||||||||||
Sbjct: 98477 acaccagcccacccacaaaa 98458
to top
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0560B06
          Length = 161720

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    gcctgctactgctagctagg 393
              ||||||||||||||||||||
Sbjct: 122761 gcctgctactgctagctagg 122742
to top
>gb|AC009988.12| Homo sapiens chromosome 10 clone RP11-62L18, complete sequence
          Length = 174398

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    accttttctaaagaaaaata 160
              ||||||||||||||||||||
Sbjct: 134941 accttttctaaagaaaaata 134922
to top
>gb|AC026395.11| Homo sapiens chromosome 10 clone RP11-45D20, complete sequence
          Length = 172777

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   accttttctaaagaaaaata 160
             ||||||||||||||||||||
Sbjct: 15662 accttttctaaagaaaaata 15643
to top
>gb|AF410480.1|AF410480S1 Homo sapiens keratinocyte growth factor receptor 2 (FGFR2) gene,
           exons 1 and 2
          Length = 25008

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 accttttctaaagaaaaata 160
           ||||||||||||||||||||
Sbjct: 526 accttttctaaagaaaaata 545
to top
>gb|AC092027.3| Homo sapiens BAC clone RP11-438N22 from 7, complete sequence
          Length = 17521

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 513  ctctgcttttgtgtggcaag 532
            ||||||||||||||||||||
Sbjct: 4331 ctctgcttttgtgtggcaag 4350
to top
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete
             Sequence, complete sequence
          Length = 105198

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   gcctgctactgctagctagg 393
             ||||||||||||||||||||
Sbjct: 60372 gcctgctactgctagctagg 60353
to top
>gb|AC155940.6| Mus musculus 10 BAC RP24-94O5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 211515

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     acaccagcccacccacaaaa 79
              ||||||||||||||||||||
Sbjct: 168668 acaccagcccacccacaaaa 168649
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 374      gcctgctactgctagctagg 393
                ||||||||||||||||||||
Sbjct: 15106709 gcctgctactgctagctagg 15106690
to top
>emb|BX530092.15| Mouse DNA sequence from clone RP23-45N17 on chromosome X, complete
              sequence
          Length = 136088

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     acaccagcccacccacaaaa 79
              ||||||||||||||||||||
Sbjct: 133772 acaccagcccacccacaaaa 133791
to top
>gb|AC107672.6| Mus musculus chromosome 1, clone RP24-95P4, complete sequence
          Length = 178519

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    acaccagcccacccacaaaa 79
             ||||||||||||||||||||
Sbjct: 29823 acaccagcccacccacaaaa 29804
to top
>gb|AC087422.1|AC087422 Caenorhabditis briggsae cosmid CB033P12, complete sequence
          Length = 97900

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 564   cgatccaccaaaccaaaccg 583
             ||||||||||||||||||||
Sbjct: 82055 cgatccaccaaaccaaaccg 82074
to top
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0784G04
          Length = 157458

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    gcctgctactgctagctagg 393
              ||||||||||||||||||||
Sbjct: 145901 gcctgctactgctagctagg 145882
to top
>gb|AC123953.4| Mus musculus chromosome UL clone RP23-234O13, complete sequence
          Length = 194728

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     acaccagcccacccacaaaa 79
              ||||||||||||||||||||
Sbjct: 109198 acaccagcccacccacaaaa 109217
to top
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1329D01
          Length = 141938

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    gcctgctactgctagctagg 393
              ||||||||||||||||||||
Sbjct: 132956 gcctgctactgctagctagg 132937
to top
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0043B10
          Length = 167399

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   gcctgctactgctagctagg 393
             ||||||||||||||||||||
Sbjct: 78675 gcctgctactgctagctagg 78656
to top
>gb|AF233344.1|AF233344 Homo sapiens fibroblast growth factor receptor 2 (FGFR2) gene,
            promoter sequence
          Length = 3338

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 141  accttttctaaagaaaaata 160
            ||||||||||||||||||||
Sbjct: 1985 accttttctaaagaaaaata 2004
to top
>dbj|AK107858.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B04, full
           insert sequence
          Length = 766

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 374 gcctgctactgctagctagg 393
           ||||||||||||||||||||
Sbjct: 100 gcctgctactgctagctagg 81
to top
>gb|AC167817.4| Mus musculus BAC clone RP23-146N9 from chromosome 17, complete sequence
          Length = 213670

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    acaccagcccacccacaaaa 79
             ||||||||||||||||||||
Sbjct: 53509 acaccagcccacccacaaaa 53528
to top
>gb|AC136376.3| Mus musculus BAC clone RP23-243M12 from 14, complete sequence
          Length = 197646

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 275   atattgacgaaatgttgtttatct 298
             |||||||| |||||||||||||||
Sbjct: 21088 atattgactaaatgttgtttatct 21065
to top
>gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map 17, complete sequence
          Length = 234061

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     acaccagcccacccacaaaa 79
              ||||||||||||||||||||
Sbjct: 110289 acaccagcccacccacaaaa 110270
to top
>emb|AL928705.5| Mouse DNA sequence from clone RP23-200K17 on chromosome X, complete
              sequence
          Length = 197883

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     acaccagcccacccacaaaa 79
              ||||||||||||||||||||
Sbjct: 134973 acaccagcccacccacaaaa 134954


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,515,297
Number of Sequences: 3902068
Number of extensions: 5515297
Number of successful extensions: 105667
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105356
Number of HSP's gapped (non-prelim): 311
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top