>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)|
            (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte
            nuclear envelope protein 1) (Myne-1) (Enaptin)
          Length = 8797

 Score = 32.7 bits (73), Expect = 0.84
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +2

Query: 302  DDILEAK*RQQQRYSWASNGDTDTGGRGCPASGCSSHQRWSGAFGSCS 445
            + +L+    QQ   SW+S  + DT G   P SG S+  R     G CS
Sbjct: 8657 EKLLDVSSSQQDLSSWSSADELDTSGSVSPTSGRSTPNRQKTPRGKCS 8704

>CRYL1_PONPY (Q5RDZ2) Lambda-crystallin homolog|
          Length = 318

 Score = 32.7 bits (73), Expect = 0.84
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 431 TPPTISGDCCSRTPDTPDHLCQCRRWTPKSIFAVAVISPRV 309
           T   ++ D C + PD P+HL   R+W  + +  +A +  +V
Sbjct: 275 TAEKVNQDMCMKVPDDPEHLAARRQWRDECLMRLAKLKSQV 315

>CRYL1_HUMAN (Q9Y2S2) Lambda-crystallin homolog|
          Length = 318

 Score = 32.7 bits (73), Expect = 0.84
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 431 TPPTISGDCCSRTPDTPDHLCQCRRWTPKSIFAVAVISPRV 309
           T   ++ D C + PD P+HL   R+W  + +  +A +  +V
Sbjct: 275 TAEKVNQDMCMKVPDDPEHLAARRQWRDECLMRLAKLKSQV 315

>CRYL1_MOUSE (Q99KP3) Lambda-crystallin homolog|
          Length = 318

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 431 TPPTISGDCCSRTPDTPDHLCQCRRWTPKSIFAVAVI 321
           T   +S D C + PD P+HL   R+W    +  ++++
Sbjct: 275 TVERVSEDMCMKVPDDPEHLAARRQWRDDCLMKLSIL 311

>ISPDF_BARQU (Q6G164) IspD/ispF bifunctional enzyme [Includes:|
           2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT);
           2-C-methyl-D-erythritol 2,4-cyclod
          Length = 391

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 317 PRVCHPGRCRARHPGCRSLQLVGHPVESQL 228
           P +CH  RC  +HP   ++ LV HP + Q+
Sbjct: 27  PVICHTVRCFCQHPAITTIILVIHPEDRQI 56

>RFAK_ECOLI (P27242) Lipopolysaccharide 1,2-N-acetylglucosaminetransferase (EC|
           2.4.1.56)
          Length = 357

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = -2

Query: 509 IFVAALDHLRRHPLPVD-ALDHRCSCRTPPTISGDCCSRTPDTPDHLCQCRRWTPKSIFA 333
           I+  AL       + VD AL H  +    PT++    SRTP+ P HL     W+P    +
Sbjct: 271 IYTVALTKYSDFVISVDTALVHIAAAYHKPTLAFYPNSRTPEYPSHLI----WSPNHHKS 326

Query: 332 VAVISP 315
           + ++SP
Sbjct: 327 IQIVSP 332

>DECA_DROSI (P91706) Protein decapentaplegic precursor (Protein DPP-C)|
          Length = 593

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +2

Query: 26  NEHQATSFKEQRLHFKTSLNYRES*HLFASSSTRG*HQLPQKASVFIVSTT 178
           N H   + KEQR H K S ++R      AS+ST   HQ     S+F+   T
Sbjct: 134 NNHNKMAVKEQRSHHKKSHHHRSHQPKQASASTES-HQSSSIESIFVEEPT 183

>NUCM_PARTE (P15689) NADH-ubiquinone oxidoreductase 49 kDa subunit (EC 1.6.5.3)|
           (EC 1.6.99.3) (NADH dehydrogenase subunit 7)
          Length = 400

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 353 TPKSIFAVAVISPRVCHPGRCRARHPGCRSLQLVGHPVESQLLA 222
           +PK  F V ++S     P RC+ R P    LQ++    +  LLA
Sbjct: 339 SPKGEFGVTLVSDGSNKPYRCKVRSPAYHHLQVLPKMSKGHLLA 382

>DL_DROME (P10041) Neurogenic locus protein delta precursor|
          Length = 833

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
 Frame = -2

Query: 449 HRCSCRTPPTISGDCCSRTPDTPD-HLCQCRR-WTPKSIFA-VAVISPRVCHPGRCRARH 279
           + C     P  +G  C   P T   + C C   W+ K     V   S + CH G CR   
Sbjct: 333 YSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPCHQGICRNVR 392

Query: 278 PGCRS 264
           PG  S
Sbjct: 393 PGLGS 397


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,766,584
Number of Sequences: 219361
Number of extensions: 1440162
Number of successful extensions: 3583
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3582
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)