ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14h20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482125.1| Oryza sativa (japonica cultivar-group), mRNA 537 e-149
2dbj|AK099874.1| Oryza sativa (japonica cultivar-group) cDNA clon... 537 e-149
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
4dbj|AP005489.3| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
5dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
6dbj|AK058264.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
7gb|AF030709.1|AF030709 Pisum sativum poly(A) polymerase mRNA, nu... 137 5e-29
8emb|Y12071.1|SOTLR40 S.oleracea mRNA for thylakoid rotamase 94 6e-16
9dbj|AK060624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 1e-11
10ref|NM_111014.2| Arabidopsis thaliana peptidyl-prolyl cis-trans ... 58 4e-05
11gb|AY568524.1| Arabidopsis thaliana multidomain cyclophilin type... 58 4e-05
12gb|AY113168.1| Arabidopsis thaliana AT3g01480/F4P13_3 mRNA, comp... 58 4e-05
13gb|AY039843.1| Arabidopsis thaliana AT3g01480/F4P13_3 mRNA, comp... 58 4e-05
14emb|BX823315.1|CNS0A5FZ Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
15emb|BX823215.1|CNS0A4SI Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
16gb|AY087781.1| Arabidopsis thaliana clone 38383 mRNA, complete s... 58 4e-05
17gb|AC005753.1|AC005753 Homo sapiens chromosome 5, P1 clone 254f1... 44 0.53
18gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC... 42 2.1
19ref|NM_166019.1| Drosophila melanogaster short stop CG18076-RH, ... 42 2.1
20gb|AC099008.1| Drosophila melanogaster, chromosome 2R, region 50... 42 2.1
21gb|AC007851.6|AC007851 Drosophila melanogaster, chromosome 2R, r... 42 2.1
22emb|BX293558.19| Mouse DNA sequence from clone RP23-182P17 on ch... 42 2.1
23emb|BX470200.12| Zebrafish DNA sequence from clone DKEY-207M2 in... 42 2.1
24gb|AC005977.3|AC005977 Drosophila melanogaster, chromosome 2R, r... 42 2.1
25gb|AE003816.4| Drosophila melanogaster chromosome 2R, section 34... 42 2.1
26gb|AC144926.6| Mus musculus chromosome 8, clone RP23-8E24, compl... 40 8.3
27gb|AC131713.3| Mus musculus BAC clone RP23-193O18 from chromosom... 40 8.3
28gb|AC132421.4| Mus musculus BAC clone RP23-294G5 from chromosome... 40 8.3
29gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 8.3
30gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete se... 40 8.3
31emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chr... 40 8.3
32emb|BX537166.6| Zebrafish DNA sequence from clone DKEY-218I12 in... 40 8.3
33emb|AL935056.18| Mouse DNA sequence from clone RP23-185F7 on chr... 40 8.3
34gb|AC024094.28| Homo sapiens 4 RP11-193M13 (Roswell Park Cancer ... 40 8.3
35gb|AC156641.2| Mus musculus BAC clone RP23-204J8 from chromosome... 40 8.3
36gb|AC158222.6| Mus musculus chromosome 8, clone RP23-117M15, com... 40 8.3
37gb|AC153527.9| Mus musculus 10 BAC RP23-320A6 (Roswell Park Canc... 40 8.3
38gb|AC152979.2| Mus musculus 10 BAC RP23-325K4 (Roswell Park Canc... 40 8.3
39emb|BX255960.14| Zebrafish DNA sequence from clone DKEY-265E17 i... 40 8.3
40gb|AC091755.3| Sus scrofa clone RP44-123F10, complete sequence 40 8.3
41ref|XM_573396.1| PREDICTED: Rattus norvegicus similar to density... 40 8.3
42gb|AC091756.3| Sus scrofa clone RP44-13J14, complete sequence 40 8.3
43gb|AC107633.11| Mus musculus chromosome 12, clone RP23-7P3, comp... 40 8.3
44emb|AL953879.7| Zebrafish DNA sequence from clone CH211-151G18, ... 40 8.3
45gb|AF020713.1|AF020713 Bacteriophage SPBc2 complete genome 40 8.3
46emb|CR759836.11| Zebrafish DNA sequence from clone CH211-254B14 ... 40 8.3
47emb|Z99115.2|BSUB0012 Bacillus subtilis complete genome (section... 40 8.3
48emb|AL928981.7| Mouse DNA sequence from clone RP23-54O14 on chro... 40 8.3
49emb|AL593847.36| Mouse DNA sequence from clone RP23-170A23 on ch... 40 8.3
50emb|CR391910.16| Zebrafish DNA sequence from clone DKEY-108F8 in... 40 8.3
51gb|AC158398.2| Mus musculus BAC clone RP23-63H11 from chromosome... 40 8.3
52emb|AL845273.7| Mouse DNA sequence from clone RP23-334D15 on chr... 40 8.3 
>ref|XM_482125.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1522

 Score =  537 bits (271), Expect = e-149
 Identities = 460/523 (87%)
 Strand = Plus / Minus

                                                                        
Query: 86   cctacaatcttgtagctcgggttgacaagattgtctaggcctgagacaacctggattgat 145
            ||||||||||| ||||| |||||| | || ||||||| |||||||||||| || || |||
Sbjct: 1348 cctacaatcttatagcttgggttggcgaggttgtctaagcctgagacaacttgaatcgat 1289

                                                                        
Query: 146  tcaataacgtcccccaccttgagatcagccaagaaatcctcattctcggttacgtatcca 205
            ||||| || ||||| |||||||| || |||||| | ||||| |||||||| || ||||||
Sbjct: 1288 tcaatgacatccccaaccttgaggtctgccaagtagtcctcgttctcggtgacatatcca 1229

                                                                        
Query: 206  aacaccgaataccgcccatccaatatattggaattacttggcgtcaactcactttctttc 265
            || || | |||||||||||||| |||||||| ||| ||||| || | |||||| ||||| 
Sbjct: 1228 aatacggcataccgcccatccagtatattggcattgcttggtgttagctcactctctttt 1169

                                                                        
Query: 266  aagagccagaagacttgactagaagcggagttgtcatcaaattcttctctagccattgcc 325
            || | ||| |||| ||| |||||||| || |||||||||||||| |||||||||||||||
Sbjct: 1168 aacaaccaaaagatttggctagaagcagaattgtcatcaaattcatctctagccattgcc 1109

                                                                        
Query: 326  atcgttccaaatgcattaaaaggaagctttgtttgagccttgtaaaggccaagttcctca 385
            || |||||||||||||||||||||||||||||||||||||||||  |||||||||| |||
Sbjct: 1108 attgttccaaatgcattaaaaggaagctttgtttgagccttgtagcggccaagttcttca 1049

                                                                        
Query: 386  agtgtttcaccgtatataggcgccttgtcaccatcaaccattatctcaagaggtatggta 445
            ||||||||||| |||| |||||| ||||||||||| ||||||| |||||||||||| |||
Sbjct: 1048 agtgtttcaccatatacaggcgctttgtcaccatcgaccattaactcaagaggtattgta 989

                                                                        
Query: 446  cgactcttgccagtactgggatcaataaaaccgtcggctggcccctcaggatctcccgtc 505
            |||   || |||||||||||||||||||| || || ||||| ||||||||||| || || 
Sbjct: 988  cgaactttaccagtactgggatcaataaatccctcagctggtccctcaggatcgccagtt 929

                                                                        
Query: 506  tgaacaacaaaaccatcagctctttggatttccatgccatcatagaacttccgttccacc 565
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 928  tgaacaacaaaaccatcagctctttgaatttccatgccatcatagaacttccgttccacc 869

                                                       
Query: 566  agatctacgaagttcccagaagtcacaggagcattatatccat 608
            ||||||| ||||||||||| ||||||||||||||| |||||||
Sbjct: 868  agatctaagaagttcccagcagtcacaggagcattgtatccat 826
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>dbj|AK099874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G22, full
            insert sequence
          Length = 1523

 Score =  537 bits (271), Expect = e-149
 Identities = 460/523 (87%)
 Strand = Plus / Minus

                                                                        
Query: 86   cctacaatcttgtagctcgggttgacaagattgtctaggcctgagacaacctggattgat 145
            ||||||||||| ||||| |||||| | || ||||||| |||||||||||| || || |||
Sbjct: 1349 cctacaatcttatagcttgggttggcgaggttgtctaagcctgagacaacttgaatcgat 1290

                                                                        
Query: 146  tcaataacgtcccccaccttgagatcagccaagaaatcctcattctcggttacgtatcca 205
            ||||| || ||||| |||||||| || |||||| | ||||| |||||||| || ||||||
Sbjct: 1289 tcaatgacatccccaaccttgaggtctgccaagtagtcctcgttctcggtgacatatcca 1230

                                                                        
Query: 206  aacaccgaataccgcccatccaatatattggaattacttggcgtcaactcactttctttc 265
            || || | |||||||||||||| |||||||| ||| ||||| || | |||||| ||||| 
Sbjct: 1229 aatacggcataccgcccatccagtatattggcattgcttggtgttagctcactctctttt 1170

                                                                        
Query: 266  aagagccagaagacttgactagaagcggagttgtcatcaaattcttctctagccattgcc 325
            || | ||| |||| ||| |||||||| || |||||||||||||| |||||||||||||||
Sbjct: 1169 aacaaccaaaagatttggctagaagcagaattgtcatcaaattcatctctagccattgcc 1110

                                                                        
Query: 326  atcgttccaaatgcattaaaaggaagctttgtttgagccttgtaaaggccaagttcctca 385
            || |||||||||||||||||||||||||||||||||||||||||  |||||||||| |||
Sbjct: 1109 attgttccaaatgcattaaaaggaagctttgtttgagccttgtagcggccaagttcttca 1050

                                                                        
Query: 386  agtgtttcaccgtatataggcgccttgtcaccatcaaccattatctcaagaggtatggta 445
            ||||||||||| |||| |||||| ||||||||||| ||||||| |||||||||||| |||
Sbjct: 1049 agtgtttcaccatatacaggcgctttgtcaccatcgaccattaactcaagaggtattgta 990

                                                                        
Query: 446  cgactcttgccagtactgggatcaataaaaccgtcggctggcccctcaggatctcccgtc 505
            |||   || |||||||||||||||||||| || || ||||| ||||||||||| || || 
Sbjct: 989  cgaactttaccagtactgggatcaataaatccctcagctggtccctcaggatcgccagtt 930

                                                                        
Query: 506  tgaacaacaaaaccatcagctctttggatttccatgccatcatagaacttccgttccacc 565
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 929  tgaacaacaaaaccatcagctctttgaatttccatgccatcatagaacttccgttccacc 870

                                                       
Query: 566  agatctacgaagttcccagaagtcacaggagcattatatccat 608
            ||||||| ||||||||||| ||||||||||||||| |||||||
Sbjct: 869  agatctaagaagttcccagcagtcacaggagcattgtatccat 827
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                            
Query: 86       cctacaatcttgtagctcgggttgacaagattgtctaggcctgagacaacctggattgat 145
                ||||||||||| ||||| |||||| | || ||||||| |||||||||||| || || |||
Sbjct: 18016454 cctacaatcttatagcttgggttggcgaggttgtctaagcctgagacaacttgaatcgat 18016395

                                                                            
Query: 146      tcaataacgtcccccaccttgagatcagccaagaaatcctcattctcggttacgtatcca 205
                ||||| || ||||| |||||||| || |||||| | ||||| |||||||| || ||||||
Sbjct: 18016394 tcaatgacatccccaaccttgaggtctgccaagtagtcctcgttctcggtgacatatcca 18016335

                                                                            
Query: 206      aacaccgaataccgcccatccaatatattggaattacttggcgtcaactcactttctttc 265
                || || | |||||||||||||| |||||||| ||| ||||| || | |||||| ||||| 
Sbjct: 18016334 aatacggcataccgcccatccagtatattggcattgcttggtgttagctcactctctttt 18016275

                                                            
Query: 266      aagagccagaagacttgactagaagcggagttgtcatcaaattc 309
                || | ||| |||| ||| |||||||| || ||||||||||||||
Sbjct: 18016274 aacaaccaaaagatttggctagaagcagaattgtcatcaaattc 18016231



 Score =  151 bits (76), Expect = 3e-33
 Identities = 127/144 (88%)
 Strand = Plus / Minus

                                                                            
Query: 383      tcaagtgtttcaccgtatataggcgccttgtcaccatcaaccattatctcaagaggtatg 442
                |||||||||||||| |||| |||||| ||||||||||| ||||||| |||||||||||| 
Sbjct: 18015950 tcaagtgtttcaccatatacaggcgctttgtcaccatcgaccattaactcaagaggtatt 18015891

                                                                            
Query: 443      gtacgactcttgccagtactgggatcaataaaaccgtcggctggcccctcaggatctccc 502
                ||||||   || |||||||||||||||||||| || || ||||| ||||||||||| || 
Sbjct: 18015890 gtacgaactttaccagtactgggatcaataaatccctcagctggtccctcaggatcgcca 18015831

                                        
Query: 503      gtctgaacaacaaaaccatcagct 526
                || |||||||||||||||||||||
Sbjct: 18015830 gtttgaacaacaaaaccatcagct 18015807



 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Minus

                                                                            
Query: 525      ctctttggatttccatgccatcatagaacttccgttccaccagatctacgaagttcccag 584
                ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 18015548 ctctttgaatttccatgccatcatagaacttccgttccaccagatctaagaagttcccag 18015489

                                        
Query: 585      aagtcacaggagcattatatccat 608
                 ||||||||||||||| |||||||
Sbjct: 18015488 cagtcacaggagcattgtatccat 18015465



 Score =  121 bits (61), Expect = 3e-24
 Identities = 70/73 (95%)
 Strand = Plus / Minus

                                                                            
Query: 311      tctctagccattgccatcgttccaaatgcattaaaaggaagctttgtttgagccttgtaa 370
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 18016129 tctctagccattgccattgttccaaatgcattaaaaggaagctttgtttgagccttgtag 18016070

                             
Query: 371      aggccaagttcct 383
                 ||||||||||||
Sbjct: 18016069 cggccaagttcct 18016057
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>dbj|AP005489.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0013H03
          Length = 152998

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                          
Query: 86     cctacaatcttgtagctcgggttgacaagattgtctaggcctgagacaacctggattgat 145
              ||||||||||| ||||| |||||| | || ||||||| |||||||||||| || || |||
Sbjct: 101489 cctacaatcttatagcttgggttggcgaggttgtctaagcctgagacaacttgaatcgat 101430

                                                                          
Query: 146    tcaataacgtcccccaccttgagatcagccaagaaatcctcattctcggttacgtatcca 205
              ||||| || ||||| |||||||| || |||||| | ||||| |||||||| || ||||||
Sbjct: 101429 tcaatgacatccccaaccttgaggtctgccaagtagtcctcgttctcggtgacatatcca 101370

                                                                          
Query: 206    aacaccgaataccgcccatccaatatattggaattacttggcgtcaactcactttctttc 265
              || || | |||||||||||||| |||||||| ||| ||||| || | |||||| ||||| 
Sbjct: 101369 aatacggcataccgcccatccagtatattggcattgcttggtgttagctcactctctttt 101310

                                                          
Query: 266    aagagccagaagacttgactagaagcggagttgtcatcaaattc 309
              || | ||| |||| ||| |||||||| || ||||||||||||||
Sbjct: 101309 aacaaccaaaagatttggctagaagcagaattgtcatcaaattc 101266



 Score =  151 bits (76), Expect = 3e-33
 Identities = 127/144 (88%)
 Strand = Plus / Minus

                                                                          
Query: 383    tcaagtgtttcaccgtatataggcgccttgtcaccatcaaccattatctcaagaggtatg 442
              |||||||||||||| |||| |||||| ||||||||||| ||||||| |||||||||||| 
Sbjct: 100985 tcaagtgtttcaccatatacaggcgctttgtcaccatcgaccattaactcaagaggtatt 100926

                                                                          
Query: 443    gtacgactcttgccagtactgggatcaataaaaccgtcggctggcccctcaggatctccc 502
              ||||||   || |||||||||||||||||||| || || ||||| ||||||||||| || 
Sbjct: 100925 gtacgaactttaccagtactgggatcaataaatccctcagctggtccctcaggatcgcca 100866

                                      
Query: 503    gtctgaacaacaaaaccatcagct 526
              || |||||||||||||||||||||
Sbjct: 100865 gtttgaacaacaaaaccatcagct 100842



 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Minus

                                                                          
Query: 525    ctctttggatttccatgccatcatagaacttccgttccaccagatctacgaagttcccag 584
              ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 100583 ctctttgaatttccatgccatcatagaacttccgttccaccagatctaagaagttcccag 100524

                                      
Query: 585    aagtcacaggagcattatatccat 608
               ||||||||||||||| |||||||
Sbjct: 100523 cagtcacaggagcattgtatccat 100500



 Score =  121 bits (61), Expect = 3e-24
 Identities = 70/73 (95%)
 Strand = Plus / Minus

                                                                          
Query: 311    tctctagccattgccatcgttccaaatgcattaaaaggaagctttgtttgagccttgtaa 370
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 101164 tctctagccattgccattgttccaaatgcattaaaaggaagctttgtttgagccttgtag 101105

                           
Query: 371    aggccaagttcct 383
               ||||||||||||
Sbjct: 101104 cggccaagttcct 101092
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>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1090H08
          Length = 200720

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                         
Query: 86    cctacaatcttgtagctcgggttgacaagattgtctaggcctgagacaacctggattgat 145
             ||||||||||| ||||| |||||| | || ||||||| |||||||||||| || || |||
Sbjct: 20250 cctacaatcttatagcttgggttggcgaggttgtctaagcctgagacaacttgaatcgat 20191

                                                                         
Query: 146   tcaataacgtcccccaccttgagatcagccaagaaatcctcattctcggttacgtatcca 205
             ||||| || ||||| |||||||| || |||||| | ||||| |||||||| || ||||||
Sbjct: 20190 tcaatgacatccccaaccttgaggtctgccaagtagtcctcgttctcggtgacatatcca 20131

                                                                         
Query: 206   aacaccgaataccgcccatccaatatattggaattacttggcgtcaactcactttctttc 265
             || || | |||||||||||||| |||||||| ||| ||||| || | |||||| ||||| 
Sbjct: 20130 aatacggcataccgcccatccagtatattggcattgcttggtgttagctcactctctttt 20071

                                                         
Query: 266   aagagccagaagacttgactagaagcggagttgtcatcaaattc 309
             || | ||| |||| ||| |||||||| || ||||||||||||||
Sbjct: 20070 aacaaccaaaagatttggctagaagcagaattgtcatcaaattc 20027



 Score =  151 bits (76), Expect = 3e-33
 Identities = 127/144 (88%)
 Strand = Plus / Minus

                                                                         
Query: 383   tcaagtgtttcaccgtatataggcgccttgtcaccatcaaccattatctcaagaggtatg 442
             |||||||||||||| |||| |||||| ||||||||||| ||||||| |||||||||||| 
Sbjct: 19746 tcaagtgtttcaccatatacaggcgctttgtcaccatcgaccattaactcaagaggtatt 19687

                                                                         
Query: 443   gtacgactcttgccagtactgggatcaataaaaccgtcggctggcccctcaggatctccc 502
             ||||||   || |||||||||||||||||||| || || ||||| ||||||||||| || 
Sbjct: 19686 gtacgaactttaccagtactgggatcaataaatccctcagctggtccctcaggatcgcca 19627

                                     
Query: 503   gtctgaacaacaaaaccatcagct 526
             || |||||||||||||||||||||
Sbjct: 19626 gtttgaacaacaaaaccatcagct 19603



 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Minus

                                                                         
Query: 525   ctctttggatttccatgccatcatagaacttccgttccaccagatctacgaagttcccag 584
             ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 19344 ctctttgaatttccatgccatcatagaacttccgttccaccagatctaagaagttcccag 19285

                                     
Query: 585   aagtcacaggagcattatatccat 608
              ||||||||||||||| |||||||
Sbjct: 19284 cagtcacaggagcattgtatccat 19261



 Score =  121 bits (61), Expect = 3e-24
 Identities = 70/73 (95%)
 Strand = Plus / Minus

                                                                         
Query: 311   tctctagccattgccatcgttccaaatgcattaaaaggaagctttgtttgagccttgtaa 370
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 19925 tctctagccattgccattgttccaaatgcattaaaaggaagctttgtttgagccttgtag 19866

                          
Query: 371   aggccaagttcct 383
              ||||||||||||
Sbjct: 19865 cggccaagttcct 19853
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>dbj|AK058264.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A03, full
           insert sequence
          Length = 434

 Score =  139 bits (70), Expect = 1e-29
 Identities = 181/218 (83%)
 Strand = Plus / Minus

                                                                       
Query: 86  cctacaatcttgtagctcgggttgacaagattgtctaggcctgagacaacctggattgat 145
           ||||||||||| ||||| |||||| | || ||||||| |||||||||||| || || |||
Sbjct: 218 cctacaatcttatagcttgggttggcgaggttgtctaagcctgagacaacttgaatcgat 159

                                                                       
Query: 146 tcaataacgtcccccaccttgagatcagccaagaaatcctcattctcggttacgtatcca 205
           ||||| || ||||| |||||||| || |||||| | ||||| |||||||| || ||||||
Sbjct: 158 tcaatgacatccccaaccttgaggtctgccaagtagtcctcgttctcggtgacatatcca 99

                                                                       
Query: 206 aacaccgaataccgcccatccaatatattggaattacttggcgtcaactcactttctttc 265
           || || | |||||||||||||| |||||||| ||| ||||| || | |||||| ||||| 
Sbjct: 98  aatacggcataccgcccatccagtatattggcattgcttggtgttagctcactctctttt 39

                                                 
Query: 266 aagagccagaagacttgactagaagcggagttgtcatc 303
           || | ||| |||| ||| |||||||| || ||||||||
Sbjct: 38  aacaaccaaaagatttggctagaagcagaattgtcatc 1
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>gb|AF030709.1|AF030709 Pisum sativum poly(A) polymerase mRNA, nuclear gene encoding
            chloroplast protein, complete cds
          Length = 1668

 Score =  137 bits (69), Expect = 5e-29
 Identities = 192/233 (82%)
 Strand = Plus / Minus

                                                                        
Query: 161  accttgagatcagccaagaaatcctcattctcggttacgtatccaaacaccgaataccgc 220
            ||||| ||||| || |||||||| ||||| || ||||| || ||||| || | ||| |  
Sbjct: 1296 accttaagatctgctaagaaatcttcattttctgttacatagccaaaaacagcatatcta 1237

                                                                        
Query: 221  ccatccaatatattggaattacttggcgtcaactcactttctttcaagagccagaagact 280
            |||| ||||||||||| ||| || || || ||||||||||||||||| ||||| || |||
Sbjct: 1236 ccatgcaatatattggcattgctcggagttaactcactttctttcaatagccaaaatact 1177

                                                                        
Query: 281  tgactagaagcggagttgtcatcaaattcttctctagccattgccatcgttccaaatgca 340
            || |||||  | |||||||| |||||||| ||||| ||||||||||| || |||||||||
Sbjct: 1176 tggctagagccagagttgtcctcaaattcctctcttgccattgccattgtcccaaatgca 1117

                                                                 
Query: 341  ttaaaaggaagctttgtttgagccttgtaaaggccaagttcctcaagtgtttc 393
            ||||| |||||||||  | |||||||||| || ||||| ||||| || |||||
Sbjct: 1116 ttaaacggaagcttttgtcgagccttgtagagaccaagctcctctagagtttc 1064
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>emb|Y12071.1|SOTLR40 S.oleracea mRNA for thylakoid rotamase
          Length = 1548

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 218/275 (79%)
 Strand = Plus / Minus

                                                                        
Query: 107  ttgacaagattgtctaggcctgagacaacctggattgattcaataacgtcccccaccttg 166
            ||||||||||| || | |||||| ||  |||||| ||| || || ||||| || ||||||
Sbjct: 1361 ttgacaagattatcaacgcctgaaaccgcctggactgactctatgacgtcaccaaccttg 1302

                                                                        
Query: 167  agatcagccaagaaatcctcattctcggttacgtatccaaacaccgaataccgcccatcc 226
            ||||| || |   |||| | ||| || ||||| || |||||||| | ||| || || || 
Sbjct: 1301 agatctgctagataatcttgattatcagttacatagccaaacactgcatatcgtccgtct 1242

                                                                        
Query: 227  aatatattggaattacttggcgtcaactcactttctttcaagagccagaagacttgacta 286
            ||||| |||| ||||||||| ||||  |||||||||||||  | ||| || | ||| || 
Sbjct: 1241 aatatgttggcattacttggggtcagttcactttctttcagcaaccaaaatatttggctt 1182

                                                                        
Query: 287  gaagcggagttgtcatcaaattcttctctagccattgccatcgttccaaatgcattaaaa 346
            ||| | || ||||  |||||||| ||||| ||||| ||||| || ||||| |||||||| 
Sbjct: 1181 gaacctgaattgttctcaaattcctctctggccatggccattgtaccaaaggcattaaat 1122

                                               
Query: 347  ggaagctttgtttgagccttgtaaaggccaagttc 381
            ||||||||||| ||||||||||| || ||||||||
Sbjct: 1121 ggaagctttgtctgagccttgtatagaccaagttc 1087



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 119/148 (80%)
 Strand = Plus / Minus

                                                                        
Query: 461  ctgggatcaataaaaccgtcggctggcccctcaggatctcccgtctgaacaacaaaacca 520
            ||||||||||| ||||| || || || || ||||| ||||| || || |||||||| |||
Sbjct: 1007 ctgggatcaatgaaaccctcagcagggccttcagggtctccggtttgcacaacaaagcca 948

                                                                        
Query: 521  tcagctctttggatttccatgccatcatagaacttccgttccaccagatctacgaagttc 580
            ||   ||||||||| |||||||||||||| || |  |||||||||| ||| |  ||||| 
Sbjct: 947  tcgcgtctttggatctccatgccatcataaaagtgtcgttccaccaaatccagaaagttg 888

                                        
Query: 581  ccagaagtcacaggagcattatatccat 608
            |||| ||| ||||| || ||||| ||||
Sbjct: 887  ccagcagttacaggggcgttataaccat 860
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>dbj|AK060624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G03, full
           insert sequence
          Length = 286

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 100/120 (83%)
 Strand = Plus / Minus

                                                                       
Query: 86  cctacaatcttgtagctcgggttgacaagattgtctaggcctgagacaacctggattgat 145
           ||||||||||| ||||| |||||| | || | ||||| |||||||||||| || || |||
Sbjct: 120 cctacaatcttatagcttgggttggcgaggtagtctaagcctgagacaacttgaatcgat 61

                                                                       
Query: 146 tcaataacgtcccccaccttgagatcagccaagaaatcctcattctcggttacgtatcca 205
           ||||| || ||||| |||||||| || |||||| | ||||| |||||||| || ||||||
Sbjct: 60  tcaatgacatccccaaccttgaggtctgccaagtagtcctcgttctcggtgacatatcca 1
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>ref|NM_111014.2| Arabidopsis thaliana peptidyl-prolyl cis-trans isomerase AT3G01480
            mRNA, complete cds
          Length = 1675

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 488  ccctcaggatctcccgtctgaacaacaaaaccatcagctctttggatttccatgccatca 547
            ||||| ||||||||||| || || ||||| ||||||| ||| ||||| ||||||||||| 
Sbjct: 1092 ccctctggatctcccgtttgtaccacaaatccatcagatctctggatctccatgccatcg 1033

                 
Query: 548  tagaa 552
            |||||
Sbjct: 1032 tagaa 1028



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 131/167 (78%)
 Strand = Plus / Minus

                                                                        
Query: 221  ccatccaatatattggaattacttggcgtcaactcactttctttcaagagccagaagact 280
            |||||||| || |||||||| ||||| |||| |||||| ||||| |  ||||| || |||
Sbjct: 1359 ccatccaagatgttggaattgcttggtgtcagctcactctcttttagcagccaaaacact 1300

                                                                        
Query: 281  tgactagaagcggagttgtcatcaaattcttctctagccattgccatcgttccaaatgca 340
            || || ||  | ||||  |  ||||| |||||||| ||||||||||| || ||||| || 
Sbjct: 1299 tggcttgatcctgagtcattctcaaactcttctcttgccattgccattgtcccaaaagcg 1240

                                                           
Query: 341  ttaaaaggaagctttgtttgagccttgtaaaggccaagttcctcaag 387
            || ||||||| |      |||||||||||||| |||||||| |||||
Sbjct: 1239 ttgaaaggaatcacaacctgagccttgtaaagaccaagttcttcaag 1193
to top
>gb|AY568524.1| Arabidopsis thaliana multidomain cyclophilin type peptidyl-prolyl
           cis-trans isomerase (CYP38) mRNA, complete cds
          Length = 1314

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 488 ccctcaggatctcccgtctgaacaacaaaaccatcagctctttggatttccatgccatca 547
           ||||| ||||||||||| || || ||||| ||||||| ||| ||||| ||||||||||| 
Sbjct: 908 ccctctggatctcccgtttgtaccacaaatccatcagatctctggatctccatgccatcg 849

                
Query: 548 tagaa 552
           |||||
Sbjct: 848 tagaa 844



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 131/167 (78%)
 Strand = Plus / Minus

                                                                        
Query: 221  ccatccaatatattggaattacttggcgtcaactcactttctttcaagagccagaagact 280
            |||||||| || |||||||| ||||| |||| |||||| ||||| |  ||||| || |||
Sbjct: 1175 ccatccaagatgttggaattgcttggtgtcagctcactctcttttagcagccaaaacact 1116

                                                                        
Query: 281  tgactagaagcggagttgtcatcaaattcttctctagccattgccatcgttccaaatgca 340
            || || ||  | ||||  |  ||||| |||||||| ||||||||||| || ||||| || 
Sbjct: 1115 tggcttgatcctgagtcattctcaaactcttctcttgccattgccattgtcccaaaagcg 1056

                                                           
Query: 341  ttaaaaggaagctttgtttgagccttgtaaaggccaagttcctcaag 387
            || ||||||| |      |||||||||||||| |||||||| |||||
Sbjct: 1055 ttgaaaggaatcacaacctgagccttgtaaagaccaagttcttcaag 1009
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>gb|AY113168.1| Arabidopsis thaliana AT3g01480/F4P13_3 mRNA, complete cds
          Length = 1314

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 488 ccctcaggatctcccgtctgaacaacaaaaccatcagctctttggatttccatgccatca 547
           ||||| ||||||||||| || || ||||| ||||||| ||| ||||| ||||||||||| 
Sbjct: 908 ccctctggatctcccgtttgtaccacaaatccatcagatctctggatctccatgccatcg 849

                
Query: 548 tagaa 552
           |||||
Sbjct: 848 tagaa 844



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 131/167 (78%)
 Strand = Plus / Minus

                                                                        
Query: 221  ccatccaatatattggaattacttggcgtcaactcactttctttcaagagccagaagact 280
            |||||||| || |||||||| ||||| |||| |||||| ||||| |  ||||| || |||
Sbjct: 1175 ccatccaagatgttggaattgcttggtgtcagctcactctcttttagcagccaaaacact 1116

                                                                        
Query: 281  tgactagaagcggagttgtcatcaaattcttctctagccattgccatcgttccaaatgca 340
            || || ||  | ||||  |  ||||| |||||||| ||||||||||| || ||||| || 
Sbjct: 1115 tggcttgatcctgagtcattctcaaactcttctcttgccattgccattgtcccaaaagcg 1056

                                                           
Query: 341  ttaaaaggaagctttgtttgagccttgtaaaggccaagttcctcaag 387
            || ||||||| |      |||||||||||||| |||||||| |||||
Sbjct: 1055 ttgaaaggaatcacaacctgagccttgtaaagaccaagttcttcaag 1009
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>gb|AY039843.1| Arabidopsis thaliana AT3g01480/F4P13_3 mRNA, complete cds
          Length = 1593

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 488  ccctcaggatctcccgtctgaacaacaaaaccatcagctctttggatttccatgccatca 547
            ||||| ||||||||||| || || ||||| ||||||| ||| ||||| ||||||||||| 
Sbjct: 1091 ccctctggatctcccgtttgtaccacaaatccatcagatctctggatctccatgccatcg 1032

                 
Query: 548  tagaa 552
            |||||
Sbjct: 1031 tagaa 1027



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 131/167 (78%)
 Strand = Plus / Minus

                                                                        
Query: 221  ccatccaatatattggaattacttggcgtcaactcactttctttcaagagccagaagact 280
            |||||||| || |||||||| ||||| |||| |||||| ||||| |  ||||| || |||
Sbjct: 1358 ccatccaagatgttggaattgcttggtgtcagctcactctcttttagcagccaaaacact 1299

                                                                        
Query: 281  tgactagaagcggagttgtcatcaaattcttctctagccattgccatcgttccaaatgca 340
            || || ||  | ||||  |  ||||| |||||||| ||||||||||| || ||||| || 
Sbjct: 1298 tggcttgatcctgagtcattctcaaactcttctcttgccattgccattgtcccaaaagcg 1239

                                                           
Query: 341  ttaaaaggaagctttgtttgagccttgtaaaggccaagttcctcaag 387
            || ||||||| |      |||||||||||||| |||||||| |||||
Sbjct: 1238 ttgaaaggaatcacaacctgagccttgtaaagaccaagttcttcaag 1192
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>emb|BX823315.1|CNS0A5FZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS21ZH03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1535

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 488  ccctcaggatctcccgtctgaacaacaaaaccatcagctctttggatttccatgccatca 547
            ||||| ||||||||||| || || ||||| ||||||| ||| ||||| ||||||||||| 
Sbjct: 1057 ccctctggatctcccgtttgtaccacaaatccatcagatctctggatctccatgccatcg 998

                 
Query: 548  tagaa 552
            |||||
Sbjct: 997  tagaa 993



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 131/167 (78%)
 Strand = Plus / Minus

                                                                        
Query: 221  ccatccaatatattggaattacttggcgtcaactcactttctttcaagagccagaagact 280
            |||||||| || |||||||| ||||| |||| |||||| ||||| |  ||||| || |||
Sbjct: 1323 ccatccaagatgttggaattgcttggtgtcagctcactctcttttagcagccaaaacact 1264

                                                                        
Query: 281  tgactagaagcggagttgtcatcaaattcttctctagccattgccatcgttccaaatgca 340
            || || ||  | ||||  |  ||||| |||||||| ||||||||||| || ||||| || 
Sbjct: 1263 tggcttgatcctgagtcattctcaaactcttctcttgccattgccattgtcccaaaagcg 1204

                                                           
Query: 341  ttaaaaggaagctttgtttgagccttgtaaaggccaagttcctcaag 387
            || ||||||| |      |||||||||||||| |||||||| |||||
Sbjct: 1203 ttgaaaggaatcacaacctgagccttgtaaagaccaagttcttcaag 1157
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>emb|BX823215.1|CNS0A4SI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS11ZE04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1472

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 488 ccctcaggatctcccgtctgaacaacaaaaccatcagctctttggatttccatgccatca 547
           ||||| ||||||||||| || || ||||| ||||||| ||| ||||| ||||||||||| 
Sbjct: 913 ccctctggatctcccgtttgtaccacaaatccatcagatctctggatctccatgccatcg 854

                
Query: 548 tagaa 552
           |||||
Sbjct: 853 tagaa 849



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 131/167 (78%)
 Strand = Plus / Minus

                                                                        
Query: 221  ccatccaatatattggaattacttggcgtcaactcactttctttcaagagccagaagact 280
            |||||||| || |||||||| ||||| |||| |||||| ||||| |  ||||| || |||
Sbjct: 1180 ccatccaagatgttggaattgcttggtgtcagctcactctcttttagcagccaaaacact 1121

                                                                        
Query: 281  tgactagaagcggagttgtcatcaaattcttctctagccattgccatcgttccaaatgca 340
            || || ||  | ||||  |  ||||| |||||||| ||||||||||| || ||||| || 
Sbjct: 1120 tggcttgatcctgagtcattctcaaactcttctcttgccattgccattgtcccaaaagcg 1061

                                                           
Query: 341  ttaaaaggaagctttgtttgagccttgtaaaggccaagttcctcaag 387
            || ||||||| |      |||||||||||||| |||||||| |||||
Sbjct: 1060 ttgaaaggaatcacaacctgagccttgtaaagaccaagttcttcaag 1014
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>gb|AY087781.1| Arabidopsis thaliana clone 38383 mRNA, complete sequence
          Length = 1547

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 488  ccctcaggatctcccgtctgaacaacaaaaccatcagctctttggatttccatgccatca 547
            ||||| ||||||||||| || || ||||| ||||||| ||| ||||| ||||||||||| 
Sbjct: 1048 ccctctggatctcccgtttgtaccacaaatccatcagatctctggatctccatgccatcg 989

                 
Query: 548  tagaa 552
            |||||
Sbjct: 988  tagaa 984



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 131/167 (78%)
 Strand = Plus / Minus

                                                                        
Query: 221  ccatccaatatattggaattacttggcgtcaactcactttctttcaagagccagaagact 280
            |||||||| || |||||||| ||||| |||| |||||| ||||| |  ||||| || |||
Sbjct: 1315 ccatccaagatgttggaattgcttggtgtcagctcactctcttttagcagccaaaacact 1256

                                                                        
Query: 281  tgactagaagcggagttgtcatcaaattcttctctagccattgccatcgttccaaatgca 340
            || || ||  | ||||  |  ||||| |||||||| ||||||||||| || ||||| || 
Sbjct: 1255 tggcttgatcctgagtcattctcaaactcttctcttgccattgccattgtcccaaaagcg 1196

                                                           
Query: 341  ttaaaaggaagctttgtttgagccttgtaaaggccaagttcctcaag 387
            || ||||||| |      |||||||||||||| |||||||| |||||
Sbjct: 1195 ttgaaaggaatcacaacctgagccttgtaaagaccaagttcttcaag 1149
to top
>gb|AC005753.1|AC005753 Homo sapiens chromosome 5, P1 clone 254f11 (LBNL H164), complete
             sequence
          Length = 120452

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 577   gttcccagaagtcacaggagca 598
             ||||||||||||||||||||||
Sbjct: 19836 gttcccagaagtcacaggagca 19815
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>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence,
             complete sequence
          Length = 105543

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 359   tgagccttgtaaaggccaagttcct 383
             |||||||||||||| ||||||||||
Sbjct: 12298 tgagccttgtaaagaccaagttcct 12274
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>ref|NM_166019.1| Drosophila melanogaster short stop CG18076-RH, transcript variant H
             (shot), mRNA
          Length = 27845

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 454   gccagtactgggatcaataaa 474
             |||||||||||||||||||||
Sbjct: 11254 gccagtactgggatcaataaa 11234
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>gb|AC099008.1| Drosophila melanogaster, chromosome 2R, region 50B-50C, BAC clone
             BACR16G12, complete sequence
          Length = 154681

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 454   gccagtactgggatcaataaa 474
             |||||||||||||||||||||
Sbjct: 59634 gccagtactgggatcaataaa 59614
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>gb|AC007851.6|AC007851 Drosophila melanogaster, chromosome 2R, region 50C-50D, BAC clone
              BACR06M19, complete sequence
          Length = 183161

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 454    gccagtactgggatcaataaa 474
              |||||||||||||||||||||
Sbjct: 143065 gccagtactgggatcaataaa 143045
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>emb|BX293558.19| Mouse DNA sequence from clone RP23-182P17 on chromosome 2, complete
            sequence
          Length = 157273

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 301  atcaaattcttctctagccat 321
            |||||||||||||||||||||
Sbjct: 5473 atcaaattcttctctagccat 5453
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>emb|BX470200.12| Zebrafish DNA sequence from clone DKEY-207M2 in linkage group 4,
             complete sequence
          Length = 172729

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 336   atgcattaaaaggaagctttg 356
             |||||||||||||||||||||
Sbjct: 33208 atgcattaaaaggaagctttg 33188
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>gb|AC005977.3|AC005977 Drosophila melanogaster, chromosome 2R, region 50C6-50C8, P1 clone
             DS04160, complete sequence
          Length = 69330

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 454   gccagtactgggatcaataaa 474
             |||||||||||||||||||||
Sbjct: 18855 gccagtactgggatcaataaa 18835
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>gb|AE003816.4| Drosophila melanogaster chromosome 2R, section 34 of 73 of the complete
             sequence
          Length = 287287

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 454   gccagtactgggatcaataaa 474
             |||||||||||||||||||||
Sbjct: 29175 gccagtactgggatcaataaa 29195
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>gb|AC144926.6| Mus musculus chromosome 8, clone RP23-8E24, complete sequence
          Length = 214694

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   cgccttgtcaccatcaacca 425
             ||||||||||||||||||||
Sbjct: 65908 cgccttgtcaccatcaacca 65889
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>gb|AC131713.3| Mus musculus BAC clone RP23-193O18 from chromosome 18, complete sequence
          Length = 220193

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 576    agttcccagaagtcacagga 595
              ||||||||||||||||||||
Sbjct: 193425 agttcccagaagtcacagga 193406
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>gb|AC132421.4| Mus musculus BAC clone RP23-294G5 from chromosome 18, complete sequence
          Length = 229447

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 576    agttcccagaagtcacagga 595
              ||||||||||||||||||||
Sbjct: 207785 agttcccagaagtcacagga 207804
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 319     cattgccatcgttccaaatg 338
               ||||||||||||||||||||
Sbjct: 1748110 cattgccatcgttccaaatg 1748129
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>gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete sequence
          Length = 113345

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   ccaagttcctcaagtgtttc 393
             ||||||||||||||||||||
Sbjct: 47798 ccaagttcctcaagtgtttc 47779
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>emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chromosome 10 Contains the
              HHEX gene for hematopoietically expressed homeobox, the 5'
              end of the gene for SEC15 (S. cerevisiae)-like (SEC15L), a
              eukaryotic translation initiation factor 2 subunit 2
              (eIF-2-beta) pseudogene and four CpG islands, complete
              sequence
          Length = 190144

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    attaaaaggaagctttgttt 359
              ||||||||||||||||||||
Sbjct: 185689 attaaaaggaagctttgttt 185708
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>emb|BX537166.6| Zebrafish DNA sequence from clone DKEY-218I12 in linkage group 16,
           complete sequence
          Length = 60424

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 415 accatcaaccattatctcaagagg 438
           ||||||||||||| ||||||||||
Sbjct: 799 accatcaaccattttctcaagagg 822
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>emb|AL935056.18| Mouse DNA sequence from clone RP23-185F7 on chromosome 2, complete
              sequence
          Length = 146086

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 581    ccagaagtcacaggagcatt 600
              ||||||||||||||||||||
Sbjct: 144330 ccagaagtcacaggagcatt 144311
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>gb|AC024094.28| Homo sapiens 4 RP11-193M13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 161973

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    ttttaataccgtaaaataattgca 51
             |||||||||| |||||||||||||
Sbjct: 97186 ttttaataccataaaataattgca 97163
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>gb|AC156641.2| Mus musculus BAC clone RP23-204J8 from chromosome 9, complete sequence
          Length = 219981

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 518   ccatcagctctttggatttc 537
             ||||||||||||||||||||
Sbjct: 92758 ccatcagctctttggatttc 92739
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>gb|AC158222.6| Mus musculus chromosome 8, clone RP23-117M15, complete sequence
          Length = 207233

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   cgccttgtcaccatcaacca 425
             ||||||||||||||||||||
Sbjct: 61745 cgccttgtcaccatcaacca 61764
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>gb|AC153527.9| Mus musculus 10 BAC RP23-320A6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205006

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctcactttctttcaagagcc 272
             ||||||||||||||||||||
Sbjct: 10048 ctcactttctttcaagagcc 10067
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>gb|AC152979.2| Mus musculus 10 BAC RP23-325K4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 183269

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctcactttctttcaagagcc 272
              ||||||||||||||||||||
Sbjct: 123471 ctcactttctttcaagagcc 123490
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>emb|BX255960.14| Zebrafish DNA sequence from clone DKEY-265E17 in linkage group 23,
             complete sequence
          Length = 172219

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   tcaagagccagaagacttga 283
             ||||||||||||||||||||
Sbjct: 24054 tcaagagccagaagacttga 24035
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>gb|AC091755.3| Sus scrofa clone RP44-123F10, complete sequence
          Length = 207865

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   ttgtcatcaaattcttctct 315
             ||||||||||||||||||||
Sbjct: 73638 ttgtcatcaaattcttctct 73619
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>ref|XM_573396.1| PREDICTED: Rattus norvegicus similar to density regulated protein
           drp1 (LOC498180), mRNA
          Length = 720

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 304 aaattcttctctagccattg 323
           ||||||||||||||||||||
Sbjct: 449 aaattcttctctagccattg 430
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>gb|AC091756.3| Sus scrofa clone RP44-13J14, complete sequence
          Length = 152058

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    ttgtcatcaaattcttctct 315
              ||||||||||||||||||||
Sbjct: 136270 ttgtcatcaaattcttctct 136251
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>gb|AC107633.11| Mus musculus chromosome 12, clone RP23-7P3, complete sequence
          Length = 202640

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 575    aagttcccagaagtcacagg 594
              ||||||||||||||||||||
Sbjct: 153751 aagttcccagaagtcacagg 153770
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>emb|AL953879.7| Zebrafish DNA sequence from clone CH211-151G18, complete sequence
          Length = 142739

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    tcaagagccagaagacttga 283
              ||||||||||||||||||||
Sbjct: 102398 tcaagagccagaagacttga 102379
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>gb|AF020713.1|AF020713 Bacteriophage SPBc2 complete genome
          Length = 134416

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  tcaaattcttctctagccat 321
            ||||||||||||||||||||
Sbjct: 1236 tcaaattcttctctagccat 1255
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>emb|CR759836.11| Zebrafish DNA sequence from clone CH211-254B14 in linkage group 3,
              complete sequence
          Length = 168413

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    tcaagagccagaagacttga 283
              ||||||||||||||||||||
Sbjct: 126130 tcaagagccagaagacttga 126111
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>emb|Z99115.2|BSUB0012 Bacillus subtilis complete genome (section 12 of 21): from 2207806 to
             2409180
          Length = 201375

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   tcaaattcttctctagccat 321
             ||||||||||||||||||||
Sbjct: 76604 tcaaattcttctctagccat 76585
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>emb|AL928981.7| Mouse DNA sequence from clone RP23-54O14 on chromosome 2, complete
            sequence
          Length = 110096

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 528  tttggatttccatgccatca 547
            ||||||||||||||||||||
Sbjct: 9326 tttggatttccatgccatca 9307
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>emb|AL593847.36| Mouse DNA sequence from clone RP23-170A23 on chromosome 11, complete
              sequence
          Length = 222315

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     aaacatgctaccctacaatc 94
              ||||||||||||||||||||
Sbjct: 119069 aaacatgctaccctacaatc 119088
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>emb|CR391910.16| Zebrafish DNA sequence from clone DKEY-108F8 in linkage group 16,
              complete sequence
          Length = 186084

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 415    accatcaaccattatctcaagagg 438
              ||||||||||||| ||||||||||
Sbjct: 184883 accatcaaccattttctcaagagg 184906
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>gb|AC158398.2| Mus musculus BAC clone RP23-63H11 from chromosome 12, complete sequence
          Length = 171334

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 575    aagttcccagaagtcacagg 594
              ||||||||||||||||||||
Sbjct: 108822 aagttcccagaagtcacagg 108803
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>emb|AL845273.7| Mouse DNA sequence from clone RP23-334D15 on chromosome 2, complete
           sequence
          Length = 158861

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 581 ccagaagtcacaggagcatt 600
           ||||||||||||||||||||
Sbjct: 244 ccagaagtcacaggagcatt 225


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,860,798
Number of Sequences: 3902068
Number of extensions: 4860798
Number of successful extensions: 82294
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82130
Number of HSP's gapped (non-prelim): 163
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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