>RL13_ARATH (P41127) 60S ribosomal protein L13 (BBC1 protein homolog)|
          Length = 206

 Score =  208 bits (530), Expect = 1e-53
 Identities = 104/140 (74%), Positives = 121/140 (86%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+ + +  KYNMK R G+GFTLEELK AGIPKKLAPTIGI+VDHRRKNRSLEG+Q+N+QR
Sbjct: 55  PVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQR 114

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LKTYK KLVIFPRRARKVKAGDSTPEELA ATQVQGDY+PI R EK  +EL+K+T EMK+
Sbjct: 115 LKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVR-EKPTMELVKLTSEMKS 173

Query: 336 FKAYGKLCVERMNQRQLGAR 277
           FKA+ K+ +ER N+R  GAR
Sbjct: 174 FKAFDKIRLERTNKRHAGAR 193

>RL132_BRANA (P41129) 60S ribosomal protein L13-2 (Cold-induced protein C24B)|
          Length = 206

 Score =  207 bits (527), Expect = 2e-53
 Identities = 105/140 (75%), Positives = 120/140 (85%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+ + +  KYNMK R G+GFTLEELK AGIPKKLAPTIGIS+DHRRKNRSLEG+QSN+QR
Sbjct: 55  PVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGISLDHRRKNRSLEGLQSNVQR 114

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LKTYKAKLVIFPRRARKVKAGDST EELA ATQVQGDYMPI R EK+ +EL+K+T EMK+
Sbjct: 115 LKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVR-EKQAMELVKLTSEMKS 173

Query: 336 FKAYGKLCVERMNQRQLGAR 277
             AY K+ +ER N+R  GAR
Sbjct: 174 VNAYDKIRLERTNKRHAGAR 193

>RL131_BRANA (P41128) 60S ribosomal protein L13-1 (Cold-induced protein C24A)|
          Length = 206

 Score =  207 bits (526), Expect = 3e-53
 Identities = 105/140 (75%), Positives = 120/140 (85%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+ + +  KYNMK R G+GFTLEELK+AGIPKKLAPTIGI+VDHRRKNRSLEG+QSN+QR
Sbjct: 55  PVVHGQTLKYNMKVRTGKGFTLEELKSAGIPKKLAPTIGIAVDHRRKNRSLEGLQSNVQR 114

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LKTYKAKLVIFPRRARKVKAGDST EELA ATQVQGDYMPI R EK   EL+K+T EMK+
Sbjct: 115 LKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVR-EKHATELVKLTTEMKS 173

Query: 336 FKAYGKLCVERMNQRQLGAR 277
            KA+ K+ +ER N+R  GAR
Sbjct: 174 VKAFDKIRLERTNKRHAGAR 193

>RL13_TOBAC (P49627) 60S ribosomal protein L13 (Clone 6.2.1)|
          Length = 202

 Score =  164 bits (416), Expect = 2e-40
 Identities = 84/140 (60%), Positives = 106/140 (75%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+ + +  KYNMK R+GRGF+LEELK AGIPKKLAPTIGI+VDHRR+NRSLEG+Q+N+QR
Sbjct: 51  PIVHGQTLKYNMKVRSGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQR 110

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           L+  + +LV+FPRRA + +     P    TATQV G YMPI R EK  + L KV ++MK+
Sbjct: 111 LEDLQGQLVVFPRRASRSRLVILPPRNCLTATQVHGAYMPIER-EKHQLILSKVLKKMKS 169

Query: 336 FKAYGKLCVERMNQRQLGAR 277
           F AY KL VER N+R +GAR
Sbjct: 170 FNAYAKLRVERTNERHIGAR 189

>RL13_CHLSW (O48513) 60S ribosomal protein L13 (BBC1 protein homolog)|
          Length = 208

 Score =  155 bits (393), Expect = 9e-38
 Identities = 77/140 (55%), Positives = 103/140 (73%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+   +  KYN K R GRGFTLEELK AGIP K APT+GI+VDHRRKNRSLE +Q+N+QR
Sbjct: 56  PIVRCQTVKYNTKQRLGRGFTLEELKEAGIPAKFAPTVGIAVDHRRKNRSLETLQANVQR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LKTY+A LVIFPR  +K KA +++  + + A+Q +G+ +P+ +G K  +EL+K+T +MK 
Sbjct: 116 LKTYRASLVIFPRNMKKPKAFEASAADCSAASQAKGELLPL-KGTKPALELVKITADMKE 174

Query: 336 FKAYGKLCVERMNQRQLGAR 277
              YGKL +ER+N R  G R
Sbjct: 175 GSQYGKLRIERVNARLKGMR 194

>RL13_BRARE (Q90Z10) 60S ribosomal protein L13|
          Length = 210

 Score =  142 bits (359), Expect = 7e-34
 Identities = 75/132 (56%), Positives = 94/132 (71%)
 Frame = -2

Query: 672 KYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQRLKTYKAKL 493
           +Y+ K RAGRGFTLEELK AGI KK+A TIGISVD RR+NRS E +Q+N+QRLK Y+ KL
Sbjct: 64  RYHTKVRAGRGFTLEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKL 123

Query: 492 VIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKAFKAYGKLC 313
           +IFPR+A K K GDST EEL  ATQ+ G  MPI +  K+  +   ++E+ K FKA+  L 
Sbjct: 124 IIFPRKAAKPKKGDSTEEELKMATQLTGPVMPIKKVHKK-EKARVISEDEKNFKAFASLR 182

Query: 312 VERMNQRQLGAR 277
           + R N R  G R
Sbjct: 183 MARANARLFGIR 194

>RL13_CHICK (P41125) 60S ribosomal protein L13 (Breast basic conserved protein|
           1)
          Length = 210

 Score =  136 bits (342), Expect = 7e-32
 Identities = 72/140 (51%), Positives = 94/140 (67%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+      +Y+ K RAGRGF+LEELK AGI K+ A TIGISVD RR+N+S E +Q+N+QR
Sbjct: 56  PIVRCPTVRYHKKVRAGRGFSLEELKLAGINKRFARTIGISVDPRRRNKSTESLQANVQR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LK Y++KL++FPR+    K GDS+PEEL  ATQ+ G  MPI    KR  +   ++EE K 
Sbjct: 116 LKEYRSKLILFPRKPSAPKKGDSSPEELKMATQLSGPVMPIRNVFKR-EKARVISEEEKN 174

Query: 336 FKAYGKLCVERMNQRQLGAR 277
           FKA+  L + R N R  G R
Sbjct: 175 FKAFASLRMARANARLFGIR 194

>RL13_RAT (P41123) 60S ribosomal protein L13|
          Length = 210

 Score =  135 bits (339), Expect = 2e-31
 Identities = 71/140 (50%), Positives = 94/140 (67%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+      +Y+ K RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+S E +Q+N+QR
Sbjct: 56  PIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKMARTIGISVDPRRRNKSTESLQANVQR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LK Y++KL++FPR+    K GDS+ EEL  ATQ+ G  MPI R   +  +   +TEE K 
Sbjct: 116 LKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPI-RNVYKKEKARAITEEEKN 174

Query: 336 FKAYGKLCVERMNQRQLGAR 277
           FKA+  L + R N R  G R
Sbjct: 175 FKAFASLRMARANARLFGIR 194

>RL13_ICTPU (Q90YV5) 60S ribosomal protein L13|
          Length = 210

 Score =  134 bits (338), Expect = 2e-31
 Identities = 72/140 (51%), Positives = 91/140 (65%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+      +YN K RAGRGFTLEELK AGI K++A TIGI+VD RR+NRS E +  N+QR
Sbjct: 56  PIVRCPTVRYNTKVRAGRGFTLEELKAAGINKRVARTIGIAVDPRRRNRSTESLHVNVQR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LK Y++KL++FPR+    K GDST EE+  ATQ+ G  MPI    K+    M +TEE K 
Sbjct: 116 LKVYRSKLILFPRKVSAPKKGDSTEEEVKMATQLTGPVMPIKIVHKKEKARM-ITEEEKK 174

Query: 336 FKAYGKLCVERMNQRQLGAR 277
           F A+  L + R N R  G R
Sbjct: 175 FNAFANLRMARANARLFGIR 194

>RL13_MOUSE (P47963) 60S ribosomal protein L13 (A52)|
          Length = 210

 Score =  134 bits (337), Expect = 3e-31
 Identities = 71/140 (50%), Positives = 94/140 (67%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+      +Y+ K RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+S E +Q+N+QR
Sbjct: 56  PIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LK Y++KL++FPR+    K GDS+ EEL  ATQ+ G  MPI R   +  +   +TEE K 
Sbjct: 116 LKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPI-RNVYKKEKARVITEEEKN 174

Query: 336 FKAYGKLCVERMNQRQLGAR 277
           FKA+  L + R N R  G R
Sbjct: 175 FKAFASLRMARANARLFGIR 194

>RL13_HUMAN (P26373) 60S ribosomal protein L13 (Breast basic conserved protein|
           1)
          Length = 210

 Score =  134 bits (336), Expect = 3e-31
 Identities = 70/140 (50%), Positives = 94/140 (67%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+      +Y+ K RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+S E +Q+N+QR
Sbjct: 56  PIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LK Y++KL++FPR+    K GDS+ EEL  ATQ+ G  MP+ R   +  +   +TEE K 
Sbjct: 116 LKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPV-RNVYKKEKARVITEEEKN 174

Query: 336 FKAYGKLCVERMNQRQLGAR 277
           FKA+  L + R N R  G R
Sbjct: 175 FKAFASLRMARANARLFGIR 194

>RL13_DROME (P41126) 60S ribosomal protein L13 (BBC1 protein homolog)|
          Length = 218

 Score =  133 bits (335), Expect = 5e-31
 Identities = 68/132 (51%), Positives = 92/132 (69%)
 Frame = -2

Query: 672 KYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQRLKTYKAKL 493
           +Y+ K RAGRGFTLEELK AGI    A TIGI+VD RRKN+SLE  Q NIQRLK Y++KL
Sbjct: 64  RYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKL 123

Query: 492 VIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKAFKAYGKLC 313
           ++FP   +K++AG+S+ EE   ATQ++G  +PI   +  +VE  +VT++ K FKA+  L 
Sbjct: 124 ILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLR 183

Query: 312 VERMNQRQLGAR 277
             R + R +G R
Sbjct: 184 KARTDARLVGIR 195

>RL13_BOVIN (Q56JZ1) 60S ribosomal protein L13|
          Length = 210

 Score =  132 bits (331), Expect = 1e-30
 Identities = 70/140 (50%), Positives = 93/140 (66%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+      +Y+ K RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+  E +Q+N+QR
Sbjct: 56  PVVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKCTESLQANVQR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LK Y++KL++FPR+    K GDS+ EEL  ATQ+ G  MPI R   +  +   +TEE K 
Sbjct: 116 LKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPI-RNVYKKEKARVITEEEKN 174

Query: 336 FKAYGKLCVERMNQRQLGAR 277
           FKA+  L + R N R  G R
Sbjct: 175 FKAFASLRMARANARLFGIR 194

>RL13_CRIGR (Q9Z313) 60S ribosomal protein L13|
          Length = 210

 Score =  130 bits (328), Expect = 3e-30
 Identities = 70/140 (50%), Positives = 93/140 (66%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+      +Y+ K RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+S E +Q+N+QR
Sbjct: 56  PIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LK Y++KL++FPR+    K GDS+ EEL  ATQ+ G  M I R   +  +   +TEE K 
Sbjct: 116 LKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMRI-RNVYKKEKARVITEEEKN 174

Query: 336 FKAYGKLCVERMNQRQLGAR 277
           FKA+  L + R N R  G R
Sbjct: 175 FKAFASLRMARANARLFGIR 194

>RL13_SCHPO (O74175) 60S ribosomal protein L13|
          Length = 208

 Score =  125 bits (314), Expect = 1e-28
 Identities = 67/132 (50%), Positives = 88/132 (66%)
 Frame = -2

Query: 672 KYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQRLKTYKAKL 493
           +YNMK RAGRGFTLEELK AG+ +++A TIGI VDHRR+NRS E +Q N++R+K Y A L
Sbjct: 64  RYNMKVRAGRGFTLEELKAAGVSRRVASTIGIPVDHRRRNRSEESLQRNVERIKVYLAHL 123

Query: 492 VIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKAFKAYGKLC 313
           ++FPR+A + K GD+T    A  T V    +PIT  ++ + E   +TEE K F A+  L 
Sbjct: 124 IVFPRKAGQPKKGDATDVSGAEQTDVAA-VLPIT--QEAVEEAKPITEEAKNFNAFSTLS 180

Query: 312 VERMNQRQLGAR 277
            ER   R  GAR
Sbjct: 181 NERAYARYAGAR 192

>RL13_LUMRU (O46157) 60S ribosomal protein L13|
          Length = 188

 Score =  117 bits (293), Expect = 3e-26
 Identities = 62/140 (44%), Positives = 90/140 (64%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P    +  KYN + R GRGF+L+ELK AGI KK A  IGISVD RR+N+S+E +Q N+QR
Sbjct: 33  PQVRCQTFKYNTRLREGRGFSLDELKAAGINKKEARAIGISVDVRRRNKSVESLQLNVQR 92

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           LK Y++KL++FP++  K   GD+T EE+  ATQ++G  +P T   K   +   +T+E + 
Sbjct: 93  LKEYRSKLILFPKKLSKPNKGDATEEEMKLATQLKGKLLPRTAWIKP-EKARAITDEERK 151

Query: 336 FKAYGKLCVERMNQRQLGAR 277
            K + +L   R ++R  G R
Sbjct: 152 VKVFDRLRQARAHKRLAGKR 171

>RL13_SCHMA (Q95043) 60S ribosomal protein L13 (BBC1 protein homolog)|
          Length = 184

 Score =  115 bits (289), Expect = 1e-25
 Identities = 56/119 (47%), Positives = 82/119 (68%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+ N    +YNMK R+GRGF+L+E++ AG+  K A TIGI+VDHRR+N S+EG+Q N+ R
Sbjct: 56  PIVNCPTFRYNMKVRSGRGFSLQEVRAAGLNPKFARTIGIAVDHRRRNVSVEGLQRNVAR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMK 340
           LK YKAKL++FP    K +A D+  +E+  ATQ++   +PIT+  KRL      + E++
Sbjct: 116 LKAYKAKLILFPLNPAKPQAMDAKADEVKKATQLRRPVLPITQRAKRLKAHKPTSSELR 174

>RL13_CAEEL (P91128) 60S ribosomal protein L13|
          Length = 207

 Score =  112 bits (279), Expect = 1e-24
 Identities = 59/132 (44%), Positives = 87/132 (65%)
 Frame = -2

Query: 672 KYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQRLKTYKAKL 493
           +YN K R GRGF+L+ELK AGI +  A TIGI+VD RR N++ EG+++N  RLK YKAKL
Sbjct: 65  RYNTKTRLGRGFSLQELKAAGISQAQARTIGIAVDVRRTNKTAEGLKANADRLKEYKAKL 124

Query: 492 VIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKAFKAYGKLC 313
           ++FP++A   K GDS+ EEL  A Q++GD +P++       E  +VT+  +  + +  L 
Sbjct: 125 ILFPKKASAPKKGDSSAEELKVAAQLRGDVLPLSH-TITFDEPRQVTDAERKVEIFRLLR 183

Query: 312 VERMNQRQLGAR 277
            ER +++  G R
Sbjct: 184 KERADKKYRGKR 195

>RL13_SPOFR (Q962U1) 60S ribosomal protein L13|
          Length = 219

 Score =  111 bits (277), Expect = 2e-24
 Identities = 59/132 (44%), Positives = 87/132 (65%)
 Frame = -2

Query: 672 KYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQRLKTYKAKL 493
           +Y+ K RAGRGFTL E++ AG+    A TIGI+VD RR+N+S+E +Q N+QRLK Y+A+L
Sbjct: 64  RYHTKVRAGRGFTLREIRAAGLNPAFARTIGIAVDPRRRNKSVESLQVNVQRLKEYRARL 123

Query: 492 VIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKAFKAYGKLC 313
           ++FP + +KV  G++  EE   ATQ++G  MP+ +   + +    +TEE K FKAY  L 
Sbjct: 124 ILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSI-ARAITEEEKDFKAYQYLR 181

Query: 312 VERMNQRQLGAR 277
             R   + +G R
Sbjct: 182 GARSIAKLVGIR 193

>RL13A_YEAST (Q12690) 60S ribosomal protein L13-A|
          Length = 199

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 49/110 (44%), Positives = 68/110 (61%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+  A   KYN K RAGRGFTL E+K AG+    A TIGI+VDHRR+NR+ E   +N+QR
Sbjct: 56  PVVRAPTVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVE 367
           LK Y++K+++FPR  +  +A     E++ +A        P T  E R V+
Sbjct: 116 LKEYQSKIIVFPRNGKAPEA-----EQVLSAAATFPIAQPATDVEARAVQ 160

>RL13_CANAL (O59931) 60S ribosomal protein L13|
          Length = 202

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 56/140 (40%), Positives = 76/140 (54%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+  A   KYN K RAGRGFTL ELK  GI  K A TIGISVDHRR+N+S E   +N+ R
Sbjct: 56  PVVRAPTVKYNRKVRAGRGFTLAELKAVGIAPKYARTIGISVDHRRQNKSQETFDANVAR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKA 337
           L+ YK+KLVIF ++ +  +       +++    V+    P      R VE+ + T     
Sbjct: 116 LQEYKSKLVIFDKKTKASEVASFEQVDVSATFPVE---QPAPESGLRAVEVPEQT----- 167

Query: 336 FKAYGKLCVERMNQRQLGAR 277
             AY  L + R  ++  G R
Sbjct: 168 --AYRTLRLARNEKKYKGIR 185

>RL13B_YEAST (P40212) 60S ribosomal protein L13-B|
          Length = 199

 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 49/110 (44%), Positives = 68/110 (61%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+  A   KYN K RAGRGFTL E+K AG+    A TIGI+VDHRR+NR+ E   +N+QR
Sbjct: 56  PVVRAPTVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQR 115

Query: 516 LKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVE 367
           LK Y++K+++FPR  +  +A     E++ +A        P T  E R V+
Sbjct: 116 LKEYQSKIIVFPRDGKAPEA-----EQVLSAAATFPIAQPATDVEARAVQ 160

>RL13_SACEX (Q876B2) 60S ribosomal protein L13|
          Length = 199

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 39/76 (51%), Positives = 54/76 (71%)
 Frame = -2

Query: 696 PLCNARLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR 517
           P+  A   KYN K RAGRGFT  E+K AG+    A TIGI+VDHRR+N++ E  + N+QR
Sbjct: 56  PVVRAPTVKYNRKVRAGRGFTFGEVKAAGLTPAYARTIGIAVDHRRQNKNQEMFELNVQR 115

Query: 516 LKTYKAKLVIFPRRAR 469
           LK Y++K+++FPR  +
Sbjct: 116 LKEYQSKIIVFPRNGK 131

>RL13E_AERPE (Q9YEN9) 50S ribosomal protein L13e|
          Length = 80

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
 Frame = -2

Query: 681 RLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKN---RSLEGMQSNIQRLK 511
           +LG  +   R GRGF+L EL  AG+  K A  +G+ VD RR+     ++E ++  I+RL+
Sbjct: 15  KLGPVDPGVRRGRGFSLGELAEAGLDAKKARKLGLHVDTRRRTVHPWNVEALKKYIERLR 74

>RL13E_SULSO (Q97W05) 50S ribosomal protein L13e|
          Length = 79

 Score = 36.6 bits (83), Expect = 0.075
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = -2

Query: 654 RAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQRLKTYKAKL 493
           R GRGF++ EL+ AG+    A  +GI VD RRK+      + N++ LK +  +L
Sbjct: 25  RIGRGFSVGELEKAGLNINKARKLGIFVDIRRKSVH----EENVETLKKFSEQL 74

>RL13E_SULTO (P58469) 50S ribosomal protein L13e|
          Length = 77

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 19/54 (35%), Positives = 31/54 (57%)
 Frame = -2

Query: 654 RAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQRLKTYKAKL 493
           + G+GF+L+ELK +G   + A  + + +D RRK    E    N++ LK  K +L
Sbjct: 21  KIGKGFSLKELKESGFSVQEAKKLRVRIDKRRKTSYPE----NVEVLKKLKEQL 70

>FOSL2_MOUSE (P47930) Fos-related antigen 2|
          Length = 326

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
 Frame = -2

Query: 588 TIGISVDHRRKNRSLEGMQSNIQRLKTYKAKLVIFPRRARKVKAGDSTPEELATATQVQG 409
           TIG +V  RR++  L   +   +R++  + KL     R R+         EL    Q + 
Sbjct: 105 TIGTTVGRRRRDEQLSPEEEEKRRIRRERNKLAAAKCRNRR--------RELTEKLQAET 156

Query: 408 DYMPITRG--EKRLVELMKVTEEMKAFK-AYGKLC 313
           + +   +   +K + EL K  E+++  K A+G +C
Sbjct: 157 EELEEEKSGLQKEIAELQKEKEKLEFMKVAHGPVC 191

>YGI4_BACC1 (Q72XT9) UPF0145 protein BCE5284|
          Length = 103

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 681 RLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDH 565
           R G Y  K +  R   +EE+KT    K     +GI VD+
Sbjct: 46  RAGAYESKLKEARDIAMEEMKTFARQKNANAIVGIDVDY 84

>Y5181_BACCR (Q815H3) UPF0145 protein BC_5181|
          Length = 103

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 681 RLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDH 565
           R G Y  K +  R   +EE+KT    K     +GI VD+
Sbjct: 46  RSGAYESKLKEARDIAMEEMKTLARQKNANAIVGIDVDY 84

>Y4874_BACCZ (Q631H3) UPF0145 protein BCE33L4874|
          Length = 103

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 681 RLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDH 565
           R G Y  K +  R   +EE+KT    K     +GI VD+
Sbjct: 46  RSGAYESKLKEARDIAMEEMKTLARQKNANAIVGIDVDY 84

>Y4859_BACHK (Q6HBA8) UPF0145 protein BT9727_4859|
          Length = 103

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 681 RLGKYNMKARAGRGFTLEELKTAGIPKKLAPTIGISVDH 565
           R G Y  K +  R   +EE+KT    K     +GI VD+
Sbjct: 46  RSGAYESKLKEARDIAMEEMKTLARQKNANAIVGIDVDY 84

>VATC_ARCFU (O29103) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase|
           subunit C)
          Length = 342

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = -2

Query: 468 KVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMKVTEEMKAFKAY 325
           ++KA D+TP+E+   T + G Y  +T  E R +  M + E +KA + Y
Sbjct: 218 RLKAEDATPDEIMECT-IPGGY-ELTEEELRKLAAMPIDEMIKALEGY 263

>MURG_ENTHR (O07670) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 360

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 23/99 (23%), Positives = 46/99 (46%)
 Frame = -2

Query: 654 RAGRGFTLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQRLKTYKAKLVIFPRR 475
           RAG   ++ EL   G+P  L P+  ++ DH+ KN       +  + +K  +       + 
Sbjct: 262 RAG-ATSIAELTALGLPAILIPSPYVTNDHQTKNAMSLVKNNAAKMIKDDELDGRSLKQA 320

Query: 474 ARKVKAGDSTPEELATATQVQGDYMPITRGEKRLVELMK 358
             ++   D   ++++ A++ QG    I    +R+ EL+K
Sbjct: 321 IEEIMTNDQLQKQMSLASKQQG----IPDASERMYELVK 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,188,459
Number of Sequences: 219361
Number of extensions: 1798874
Number of successful extensions: 5006
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4987
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)