ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate al... 258 1e-65
2gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 194 2e-46
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
4dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
5dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
6gb|AY103557.1| Zea mays PCO070710 mRNA sequence 194 2e-46
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 194 2e-46
8dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
9gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds 170 3e-39
10dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolas... 170 3e-39
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
13emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007... 101 2e-18
14gb|AY106811.1| Zea mays PCO109530 mRNA sequence 66 1e-07
15gb|AF467803.1| Hevea brasiliensis latex plastidic aldolase-like ... 50 0.006
16gb|BT017456.1| Zea mays clone EL01N0407B10.c mRNA sequence 46 0.10
17gb|AF537127.1| Camellia sinensis beta-1,3-glucosidase-like mRNA,... 46 0.10
18gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 44 0.40
19emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete ... 44 0.40
20emb|BX640436.1| Bordetella parapertussis strain 12822, complete ... 44 0.40
21emb|BX640411.1| Bordetella pertussis strain Tohama I, complete g... 44 0.40
22ref|NM_126176.2| Arabidopsis thaliana fructose-bisphosphate aldo... 42 1.6
23ref|XM_548078.2| PREDICTED: Canis familiaris similar to RUN doma... 42 1.6
24gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.6
25gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map... 42 1.6
26gb|AF325014.2|AF325014 Arabidopsis thaliana At2g01140 (At2g01140... 42 1.6
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
28emb|BX820093.1|CNS0A9H9 Arabidopsis thaliana Full-length cDNA Co... 42 1.6
29emb|BX821886.1|CNS0A9AM Arabidopsis thaliana Full-length cDNA Co... 42 1.6
30emb|BX820040.1|CNS0A9FV Arabidopsis thaliana Full-length cDNA Co... 42 1.6
31emb|BX819026.1|CNS0A82R Arabidopsis thaliana Full-length cDNA Co... 42 1.6
32gb|AY086203.1| Arabidopsis thaliana clone 22418 mRNA, complete s... 42 1.6
33dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
34dbj|AB027001.1| Nicotiana paniculata mRNA for plastidic aldolase... 42 1.6
35gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H... 40 6.2
36gb|AF158180.1| Homo sapiens methyl CpG binding protein 2 (MECP2)... 40 6.2
37gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 6.2
38gb|AC011070.8| Drosophila melanogaster clone BACR02B12, complete... 40 6.2
39gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete... 40 6.2
40gb|AC009394.5| Drosophila melanogaster clone BACR03J17, complete... 40 6.2
41ref|XM_587886.2| PREDICTED: Bos taurus similar to RUN domain con... 40 6.2
42ref|NM_004992.2| Homo sapiens methyl CpG binding protein 2 (Rett... 40 6.2
43ref|XM_869403.1| PREDICTED: Bos taurus similar to dead end homol... 40 6.2
44gb|AY541280.1| Homo sapiens methyl CpG binding protein 2 isoform... 40 6.2
45ref|XM_848395.1| PREDICTED: Canis familiaris similar to Methyl-C... 40 6.2
46gb|AF030876.2| Homo sapiens chromosome X clone Qc-8D3, RP4-671D9... 40 6.2
47emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 40 6.2
48emb|BX538060.1|HSM806231 Homo sapiens mRNA; cDNA DKFZp686A24160 ... 40 6.2
49emb|CR559941.5| Zebrafish DNA sequence from clone DKEY-161O1 in ... 40 6.2
50gb|AC159035.2| Pan troglodytes BAC clone CH251-297P8 from chromo... 40 6.2
51ref|NM_173273.1| Danio rerio digestive-organ expansion factor (d... 40 6.2
52gb|AF506211.1| Danio rerio DJ434O14.5-like protein mRNA, complet... 40 6.2
53emb|CR604541.1| full-length cDNA clone CS0DC024YJ12 of Neuroblas... 40 6.2
54emb|CR598471.1| full-length cDNA clone CS0DC015YE07 of Neuroblas... 40 6.2
55gb|AY029175.1| Cavia porcellus F-box protein OCP1 (OCP1) mRNA, c... 40 6.2
56gb|AF295597.1|AF295597 Macaca fascicularis methyl-CpG-binding pr... 40 6.2
57gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, re... 40 6.2
58dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.2
59dbj|BS000236.1| Pan troglodytes chromosome 22 clone:PTB-058L13, ... 40 6.2
60dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, ... 40 6.2
61dbj|BS000235.1| Pan troglodytes chromosome 22 clone:PTB-013J17, ... 40 6.2
62emb|AJ132917.1|HSA132917 Homo sapiens mRNA for methyl-CpG-bindin... 40 6.2
63gb|BC058062.1| Danio rerio digestive-organ expansion factor, mRN... 40 6.2
64gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59... 40 6.2
65gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 ... 40 6.2
66dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.2
67gb|L37298.1|HUMMECP Homo sapiens methyl-CpG-binding protein (MeC... 40 6.2
68gb|BC011612.1| Homo sapiens methyl CpG binding protein 2 (Rett s... 40 6.2
69emb|X89430.1|HSRNACPGB H.sapiens mRNA for methyl CpG binding pro... 40 6.2
70emb|X94628.1|HSMECP2 H.sapiens MeCP-2 gene 40 6.2
71emb|X99686.1|HSMECP2X H.sapiens mRNA for methyl-CpG-binding prot... 40 6.2
72emb|Y12643.1|HSMECPG2 H.sapiens mRNA for methyl-CpG-binding prot... 40 6.2
73dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 6.2 
>gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1577

 Score =  258 bits (130), Expect = 1e-65
 Identities = 164/176 (93%)
 Strand = Plus / Minus

                                                                        
Query: 276  gatcagnagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcg 335
            |||||| |||||||||||||||||||||||  ||| ||||| || |||||||||||||||
Sbjct: 1267 gatcagtagctgtagttcttgacgaacatgccctccttggcggccgcggcctcgccgtcg 1208

                                                                        
Query: 336  ctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcc 395
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1207 ctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagaagcgcctcc 1148

                                                                    
Query: 396  tgcgctgccgcgacgntctccggccgaccgccccacgtcttgaggcaggtgttctg 451
            ||||| ||||||||| |||| ||||| |||||||||||||||| ||||||||||||
Sbjct: 1147 tgcgccgccgcgacgttctctggccgcccgccccacgtcttgaagcaggtgttctg 1092



 Score =  147 bits (74), Expect = 4e-32
 Identities = 96/101 (95%), Gaps = 2/101 (1%)
 Strand = Plus / Minus

                                                                        
Query: 135  gtccatctcttccatcagagctggtctcgacctgtaa-caacgacgacacactggctggc 193
            |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 1400 gtccatctct-ccatcagagctggtctcgacctgtaaacaacgaggacacactgcctggc 1342

                                                     
Query: 194  taaggtgccctcaagctgctnaaggcgctactagcactctc 234
            |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1341 taaggtgccctcaagctgctcaaggcgctactagcactctc 1301
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>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score =  194 bits (98), Expect = 2e-46
 Identities = 151/169 (89%)
 Strand = Plus / Plus

                                                                         
Query: 287   gtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgctggtgtactt 346
             |||||||||||||||||||  ||| |||||  | ||||||||||||||||||||||||||
Sbjct: 63362 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 63421

                                                                         
Query: 347   gccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgc 406
             ||||||||||||||| ||||||||||||||||| || |||||||| |||||||| |||  
Sbjct: 63422 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 63481

                                                              
Query: 407   gacgntctccggccgaccgccccacgtcttgaggcaggtgttctgcagc 455
              ||| |||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 63482 cacgttctccggctgcccgccccacgtcttgaggcacgtgttctgcagc 63530
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  194 bits (98), Expect = 2e-46
 Identities = 151/169 (89%)
 Strand = Plus / Plus

                                                                           
Query: 287     gtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgctggtgtactt 346
               |||||||||||||||||||  ||| |||||  | ||||||||||||||||||||||||||
Sbjct: 3469407 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 3469466

                                                                           
Query: 347     gccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgc 406
               ||||||||||||||| ||||||||||||||||| || |||||||| |||||||| |||  
Sbjct: 3469467 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 3469526

                                                                
Query: 407     gacgntctccggccgaccgccccacgtcttgaggcaggtgttctgcagc 455
                ||| |||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 3469527 cacgttctccggctgcccgccccacgtcttgaggcacgtgttctgcagc 3469575
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>dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C04, full
            insert sequence
          Length = 1492

 Score =  194 bits (98), Expect = 2e-46
 Identities = 151/169 (89%)
 Strand = Plus / Minus

                                                                        
Query: 287  gtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgctggtgtactt 346
            |||||||||||||||||||  ||| |||||  | ||||||||||||||||||||||||||
Sbjct: 1252 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 1193

                                                                        
Query: 347  gccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgc 406
            ||||||||||||||| ||||||||||||||||| || |||||||| |||||||| |||  
Sbjct: 1192 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 1133

                                                             
Query: 407  gacgntctccggccgaccgccccacgtcttgaggcaggtgttctgcagc 455
             ||| |||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 1132 cacgttctccggctgcccgccccacgtcttgaggcacgtgttctgcagc 1084
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>dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O18, full
            insert sequence
          Length = 1622

 Score =  194 bits (98), Expect = 2e-46
 Identities = 151/169 (89%)
 Strand = Plus / Minus

                                                                        
Query: 287  gtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgctggtgtactt 346
            |||||||||||||||||||  ||| |||||  | ||||||||||||||||||||||||||
Sbjct: 1248 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 1189

                                                                        
Query: 347  gccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgc 406
            ||||||||||||||| ||||||||||||||||| || |||||||| |||||||| |||  
Sbjct: 1188 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 1129

                                                             
Query: 407  gacgntctccggccgaccgccccacgtcttgaggcaggtgttctgcagc 455
             ||| |||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 1128 cacgttctccggctgcccgccccacgtcttgaggcacgtgttctgcagc 1080
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>gb|AY103557.1| Zea mays PCO070710 mRNA sequence
          Length = 1761

 Score =  194 bits (98), Expect = 2e-46
 Identities = 154/173 (89%)
 Strand = Plus / Minus

                                                                        
Query: 283  agctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgctggtgt 342
            ||||||||||||||||||||||   ||| |||||  | |||||||||||||||  |||||
Sbjct: 1401 agctgtagttcttgacgaacattccctccttggcctcggcggcctcgccgtcggaggtgt 1342

                                                                        
Query: 343  acttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctg 402
            ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 1341 acttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcgtcctgcgccg 1282

                                                                 
Query: 403  ccgcgacgntctccggccgaccgccccacgtcttgaggcaggtgttctgcagc 455
            ||  |||  | |||||| | |||||||| ||||||||||||||||||||||||
Sbjct: 1281 ccttgaccttgtccggctggccgccccaggtcttgaggcaggtgttctgcagc 1229
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  194 bits (98), Expect = 2e-46
 Identities = 151/169 (89%)
 Strand = Plus / Plus

                                                                           
Query: 287     gtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgctggtgtactt 346
               |||||||||||||||||||  ||| |||||  | ||||||||||||||||||||||||||
Sbjct: 3478111 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 3478170

                                                                           
Query: 347     gccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgc 406
               ||||||||||||||| ||||||||||||||||| || |||||||| |||||||| |||  
Sbjct: 3478171 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 3478230

                                                                
Query: 407     gacgntctccggccgaccgccccacgtcttgaggcaggtgttctgcagc 455
                ||| |||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 3478231 cacgttctccggctgcccgccccacgtcttgaggcacgtgttctgcagc 3478279
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>dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A10, full
            insert sequence
          Length = 2135

 Score =  174 bits (88), Expect = 2e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                        
Query: 321  gcggcctcgccgtcgctggtgtacttgccgagctgcgccagggagttggccttggcgcgc 380
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1209 gcggcctcgccgtcgctggtgtacttgccgagctgcgccagcgagttggccttggcgcgg 1150

                                                                        
Query: 381  agcagcagcgcctcctgcgctgccgcgacgntctccggccgaccgccccacgtcttgagg 440
            || |||||||| |||||||| |||   ||| |||||||| | ||||||||||||||||||
Sbjct: 1149 aggagcagcgcgtcctgcgccgccttcacgttctccggctgcccgccccacgtcttgagg 1090

                           
Query: 441  caggtgttctgcagc 455
            || ||||||||||||
Sbjct: 1089 cacgtgttctgcagc 1075
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>gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds
          Length = 1302

 Score =  170 bits (86), Expect = 3e-39
 Identities = 148/169 (87%)
 Strand = Plus / Minus

                                                                        
Query: 287  gtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgctggtgtactt 346
            |||||||||||||||||||   || |||||  | ||||| ||||||||||||||||||||
Sbjct: 1144 gtagttcttgacgaacatgccttccttggcctcggcggcttcgccgtcgctggtgtactt 1085

                                                                        
Query: 347  gccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgc 406
            ||||||||||||||| ||||||||||||||||| || |||||||| |||||||| ||   
Sbjct: 1084 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcttt 1025

                                                             
Query: 407  gacgntctccggccgaccgccccacgtcttgaggcaggtgttctgcagc 455
             ||| |||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 1024 cacgttctccggctgcccgccccacgtcttgaggcacgtgttctgcagc 976
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>dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolase, complete cds, clone:Aldp
          Length = 2915

 Score =  170 bits (86), Expect = 3e-39
 Identities = 148/169 (87%)
 Strand = Plus / Minus

                                                                        
Query: 287  gtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgctggtgtactt 346
            |||||||||||||||||||  ||| |||||  | ||||||||||||||||||||||||||
Sbjct: 2780 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 2721

                                                                        
Query: 347  gccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgc 406
            ||||||||||||||| ||||||||||||||||| || |||||    |||||||| |||  
Sbjct: 2720 gccgagctgcgccagcgagttggccttggcgcggaggagcaggcggtcctgcgccgcctt 2661

                                                             
Query: 407  gacgntctccggccgaccgccccacgtcttgaggcaggtgttctgcagc 455
             ||| |||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 2660 cacgttctccggctgcccgccccacgtcttgaggcacgtgttctgcagc 2612
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  101 bits (51), Expect = 2e-18
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                           
Query: 278     tcagnagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 337
               |||| || ||||||||||||||||||||  |||  ||||  | |||||||||||||||||
Sbjct: 3543513 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 3543454

                                             
Query: 338     ggtgtacttgccgagctgcgccagggagtt 367
               |||||||||||||||||||||||| |||||
Sbjct: 3543453 ggtgtacttgccgagctgcgccagcgagtt 3543424



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                           
Query: 394     cctgcgctgccgcgacgntctccggccgaccgccccacgtcttgaggcaggtgttctgca 453
               ||||||| ||||||||| ||||| |||| | |||||||||||||||||||||||||||||
Sbjct: 3543420 cctgcgccgccgcgacgttctcccgccggctgccccacgtcttgaggcaggtgttctgca 3543361

                 
Query: 454     gc 455
               ||
Sbjct: 3543360 gc 3543359
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  101 bits (51), Expect = 2e-18
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                           
Query: 278     tcagnagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 337
               |||| || ||||||||||||||||||||  |||  ||||  | |||||||||||||||||
Sbjct: 3543458 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 3543399

                                             
Query: 338     ggtgtacttgccgagctgcgccagggagtt 367
               |||||||||||||||||||||||| |||||
Sbjct: 3543398 ggtgtacttgccgagctgcgccagcgagtt 3543369



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                           
Query: 394     cctgcgctgccgcgacgntctccggccgaccgccccacgtcttgaggcaggtgttctgca 453
               ||||||| ||||||||| ||||| |||| | |||||||||||||||||||||||||||||
Sbjct: 3543365 cctgcgccgccgcgacgttctcccgccggctgccccacgtcttgaggcaggtgttctgca 3543306

                 
Query: 454     gc 455
               ||
Sbjct: 3543305 gc 3543304
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>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score =  101 bits (51), Expect = 2e-18
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                         
Query: 278   tcagnagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 337
             |||| || ||||||||||||||||||||  |||  ||||  | |||||||||||||||||
Sbjct: 58441 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 58382

                                           
Query: 338   ggtgtacttgccgagctgcgccagggagtt 367
             |||||||||||||||||||||||| |||||
Sbjct: 58381 ggtgtacttgccgagctgcgccagcgagtt 58352



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                         
Query: 394   cctgcgctgccgcgacgntctccggccgaccgccccacgtcttgaggcaggtgttctgca 453
             ||||||| ||||||||| ||||| |||| | |||||||||||||||||||||||||||||
Sbjct: 58348 cctgcgccgccgcgacgttctcccgccggctgccccacgtcttgaggcaggtgttctgca 58289

               
Query: 454   gc 455
             ||
Sbjct: 58288 gc 58287
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>gb|AY106811.1| Zea mays PCO109530 mRNA sequence
          Length = 1545

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 348  ccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgcc 404
            |||||||| ||||| ||||||||||| ||||||| |||||| |||| ||||||||||
Sbjct: 1174 ccgagctgggccagcgagttggcctttgcgcgcaccagcagggccttctgcgctgcc 1118
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>gb|AF467803.1| Hevea brasiliensis latex plastidic aldolase-like protein mRNA,
            complete cds
          Length = 1552

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 339  gtgtacttgccgagctgcgccagggagttggccttggcgcg 379
            ||||||||||| ||||| || || |||||||||||||||||
Sbjct: 1260 gtgtacttgccaagctgagcaagtgagttggccttggcgcg 1220
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>gb|BT017456.1| Zea mays clone EL01N0407B10.c mRNA sequence
          Length = 859

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 351 agctgcgccagggagttggccttggcgcgcagcagcagcgcct 393
           ||||| ||||| ||||||||||| ||||||| |||||| ||||
Sbjct: 666 agctgtgccagcgagttggcctttgcgcgcaccagcagggcct 624
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>gb|AF537127.1| Camellia sinensis beta-1,3-glucosidase-like mRNA, partial sequence
          Length = 584

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 338 ggtgtacttgccgagctgcgccagggagttggccttggc 376
           ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 305 ggtgtacttgccgagttgagccagagagttggcgttggc 267
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 375    gcgcgcagcagcagcgcctcctgcgc 400
              ||||||||||||||||| ||||||||
Sbjct: 631404 gcgcgcagcagcagcgcatcctgcgc 631429
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>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 370    ccttggcgcgcagcagcagcgc 391
              ||||||||||||||||||||||
Sbjct: 309021 ccttggcgcgcagcagcagcgc 309000



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 375    gcgcgcagcagcagcgcctcctgc 398
              ||||||||||||||||| ||||||
Sbjct: 222907 gcgcgcagcagcagcgcttcctgc 222884
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>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14
          Length = 255260

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 370    ccttggcgcgcagcagcagcgc 391
              ||||||||||||||||||||||
Sbjct: 101392 ccttggcgcgcagcagcagcgc 101371
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>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12
          Length = 346359

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 370    ccttggcgcgcagcagcagcgc 391
              ||||||||||||||||||||||
Sbjct: 281832 ccttggcgcgcagcagcagcgc 281853
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>ref|NM_126176.2| Arabidopsis thaliana fructose-bisphosphate aldolase AT2G01140 mRNA,
            complete cds
          Length = 1515

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 345  ttgccgagctgcgccagggagttggcctt 373
            ||||||||||| ||||| |||||||||||
Sbjct: 1253 ttgccgagctgggccagtgagttggcctt 1225
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>ref|XM_548078.2| PREDICTED: Canis familiaris similar to RUN domain containing 1
           (LOC490955), mRNA
          Length = 2110

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 376 cgcgcagcagcagcgcctcctgcgc 400
           |||| ||||||||||||||||||||
Sbjct: 348 cgcggagcagcagcgcctcctgcgc 372
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 376     cgcgcagcagcagcgcctcctgcgc 400
               ||||||||||||||||| |||||||
Sbjct: 5068387 cgcgcagcagcagcgccgcctgcgc 5068411
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>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete
            sequence
          Length = 94029

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 345  ttgccgagctgcgccagggagttggcctt 373
            ||||||||||| ||||| |||||||||||
Sbjct: 4669 ttgccgagctgggccagtgagttggcctt 4697
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>gb|AF325014.2|AF325014 Arabidopsis thaliana At2g01140 (At2g01140/F10A8.2) mRNA, complete cds
          Length = 1470

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 345  ttgccgagctgcgccagggagttggcctt 373
            ||||||||||| ||||| |||||||||||
Sbjct: 1207 ttgccgagctgggccagtgagttggcctt 1179
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 3        tacttacttacttagggtggcaaacaaag 31
                |||||||||||||||||  ||||||||||
Sbjct: 17686289 tacttacttacttagggatgcaaacaaag 17686261
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>emb|BX820093.1|CNS0A9H9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS72ZH02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1377

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 345  ttgccgagctgcgccagggagttggcctt 373
            ||||||||||| ||||| |||||||||||
Sbjct: 1195 ttgccgagctgggccagtgagttggcctt 1167
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>emb|BX821886.1|CNS0A9AM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL81ZH02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 329

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 345 ttgccgagctgcgccagggagttggcctt 373
           ||||||||||| ||||| |||||||||||
Sbjct: 88  ttgccgagctgggccagtgagttggcctt 60
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>emb|BX820040.1|CNS0A9FV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS67ZB05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1391

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 345  ttgccgagctgcgccagggagttggcctt 373
            ||||||||||| ||||| |||||||||||
Sbjct: 1187 ttgccgagctgggccagtgagttggcctt 1159
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>emb|BX819026.1|CNS0A82R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB38ZH11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 262

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 345 ttgccgagctgcgccagggagttggcctt 373
           ||||||||||| ||||| |||||||||||
Sbjct: 37  ttgccgagctgggccagtgagttggcctt 9
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>gb|AY086203.1| Arabidopsis thaliana clone 22418 mRNA, complete sequence
          Length = 1469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 345  ttgccgagctgcgccagggagttggcctt 373
            ||||||||||| ||||| |||||||||||
Sbjct: 1207 ttgccgagctgggccagtgagttggcctt 1179
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>dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_F08
          Length = 134988

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 3     tacttacttacttagggtggcaaacaaag 31
             |||||||||||||||||  ||||||||||
Sbjct: 90322 tacttacttacttagggatgcaaacaaag 90294
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>dbj|AB027001.1| Nicotiana paniculata mRNA for plastidic aldolase NPALDP1, complete
            cds
          Length = 1384

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 423  ccgccccacgtcttgaggcaggtgttctg 451
            |||||||| ||||||||||| ||||||||
Sbjct: 1081 ccgccccatgtcttgaggcatgtgttctg 1053
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>gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H14, complete sequence
          Length = 118437

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   acatgttctctttggcagct 320
             ||||||||||||||||||||
Sbjct: 27603 acatgttctctttggcagct 27584
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>gb|AF158180.1| Homo sapiens methyl CpG binding protein 2 (MECP2) mRNA, complete cds
          Length = 10182

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1226 gcgcagcagcagcgcctcct 1245
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>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    acatgttctctttggcagct 320
              ||||||||||||||||||||
Sbjct: 323939 acatgttctctttggcagct 323958
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>gb|AC011070.8| Drosophila melanogaster clone BACR02B12, complete sequence
          Length = 168850

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     aacaaaggcaacaacaacgc 44
              ||||||||||||||||||||
Sbjct: 155801 aacaaaggcaacaacaacgc 155820
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>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence
          Length = 171563

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   ggcaaacaaaggcaacaaca 40
            ||||||||||||||||||||
Sbjct: 2560 ggcaaacaaaggcaacaaca 2541
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>gb|AC009394.5| Drosophila melanogaster clone BACR03J17, complete sequence
          Length = 199043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ggcaaacaaaggcaacaaca 40
              ||||||||||||||||||||
Sbjct: 155393 ggcaaacaaaggcaacaaca 155374
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>ref|XM_587886.2| PREDICTED: Bos taurus similar to RUN domain containing 1,
           transcript variant 1 (LOC539525), mRNA
          Length = 1842

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 381 agcagcagcgcctcctgcgc 400
           ||||||||||||||||||||
Sbjct: 353 agcagcagcgcctcctgcgc 372
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>ref|NM_004992.2| Homo sapiens methyl CpG binding protein 2 (Rett syndrome) (MECP2),
            mRNA
          Length = 10182

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1226 gcgcagcagcagcgcctcct 1245
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>ref|XM_869403.1| PREDICTED: Bos taurus similar to dead end homolog 1 (LOC525516),
           mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 gcagcagcagcgcctcctgc 398
           ||||||||||||||||||||
Sbjct: 514 gcagcagcagcgcctcctgc 495
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>gb|AY541280.1| Homo sapiens methyl CpG binding protein 2 isoform B (MECP2) mRNA,
            complete cds
          Length = 1504

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1102 gcgcagcagcagcgcctcct 1121
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>ref|XM_848395.1| PREDICTED: Canis familiaris similar to Methyl-CpG-binding protein 2
            (MeCP-2 protein) (MeCP2), transcript variant 1
            (LOC612973), mRNA
          Length = 1793

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1264 gcgcagcagcagcgcctcct 1283
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>gb|AF030876.2| Homo sapiens chromosome X clone Qc-8D3, RP4-671D9, I104-219D,
             L110-C1837 map q28, complete sequence
          Length = 112752

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   gcgcagcagcagcgcctcct 396
             ||||||||||||||||||||
Sbjct: 22241 gcgcagcagcagcgcctcct 22222
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>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 375    gcgcgcagcagcagcgcctcctgc 398
              ||||||||||||||||| ||||||
Sbjct: 315571 gcgcgcagcagcagcgcttcctgc 315548
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>emb|BX538060.1|HSM806231 Homo sapiens mRNA; cDNA DKFZp686A24160 (from clone DKFZp686A24160)
          Length = 1763

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1151 gcgcagcagcagcgcctcct 1170
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>emb|CR559941.5| Zebrafish DNA sequence from clone DKEY-161O1 in linkage group 13,
             complete sequence
          Length = 89710

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    gcagtaaaaccattccaaag 94
             ||||||||||||||||||||
Sbjct: 12372 gcagtaaaaccattccaaag 12353
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>gb|AC159035.2| Pan troglodytes BAC clone CH251-297P8 from chromosome unknown, complete
              sequence
          Length = 207834

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 377    gcgcagcagcagcgcctcct 396
              ||||||||||||||||||||
Sbjct: 179458 gcgcagcagcagcgcctcct 179439
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>ref|NM_173273.1| Danio rerio digestive-organ expansion factor (def), mRNA
          Length = 2445

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   gcagtaaaaccattccaaag 94
            ||||||||||||||||||||
Sbjct: 1694 gcagtaaaaccattccaaag 1713
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>gb|AF506211.1| Danio rerio DJ434O14.5-like protein mRNA, complete cds
          Length = 2445

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   gcagtaaaaccattccaaag 94
            ||||||||||||||||||||
Sbjct: 1694 gcagtaaaaccattccaaag 1713
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>emb|CR604541.1| full-length cDNA clone CS0DC024YJ12 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1524

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1033 gcgcagcagcagcgcctcct 1052
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>emb|CR598471.1| full-length cDNA clone CS0DC015YE07 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1536

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1036 gcgcagcagcagcgcctcct 1055
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>gb|AY029175.1| Cavia porcellus F-box protein OCP1 (OCP1) mRNA, complete cds
          Length = 1180

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 376 cgcgcagcagcagcgcctcc 395
           ||||||||||||||||||||
Sbjct: 248 cgcgcagcagcagcgcctcc 229
to top
>gb|AF295597.1|AF295597 Macaca fascicularis methyl-CpG-binding protein 2 (MECP2) mRNA,
            complete cds
          Length = 1461

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1059 gcgcagcagcagcgcctcct 1078
to top
>gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, region 13C-13E, BAC clone
              BACR36D15, complete sequence
          Length = 159513

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     aacaaaggcaacaacaacgc 44
              ||||||||||||||||||||
Sbjct: 129529 aacaaaggcaacaacaacgc 129510
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 382     gcagcagcgcctcctgcgctgccgcgac 409
               ||||||||||| ||||||| ||||||||
Sbjct: 5541341 gcagcagcgccgcctgcgccgccgcgac 5541368
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>dbj|BS000236.1| Pan troglodytes chromosome 22 clone:PTB-058L13, map 22, complete
             sequences
          Length = 160456

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   cgtcttgaggcaggtgttct 450
             ||||||||||||||||||||
Sbjct: 58006 cgtcttgaggcaggtgttct 58025
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>dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, map 22, complete
              sequences
          Length = 174520

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    cgtcttgaggcaggtgttct 450
              ||||||||||||||||||||
Sbjct: 149721 cgtcttgaggcaggtgttct 149740
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>dbj|BS000235.1| Pan troglodytes chromosome 22 clone:PTB-013J17, map 22, complete
              sequences
          Length = 100580

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    cgtcttgaggcaggtgttct 450
              ||||||||||||||||||||
Sbjct: 100416 cgtcttgaggcaggtgttct 100435
to top
>emb|AJ132917.1|HSA132917 Homo sapiens mRNA for methyl-CpG-binding protein 2
          Length = 10091

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1134 gcgcagcagcagcgcctcct 1153
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>gb|BC058062.1| Danio rerio digestive-organ expansion factor, mRNA (cDNA clone
            MGC:63753 IMAGE:2640310), complete cds
          Length = 2466

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   gcagtaaaaccattccaaag 94
            ||||||||||||||||||||
Sbjct: 1673 gcagtaaaaccattccaaag 1692
to top
>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the complete
              sequence
          Length = 224889

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ggcaaacaaaggcaacaaca 40
              ||||||||||||||||||||
Sbjct: 175887 ggcaaacaaaggcaacaaca 175868
to top
>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete
             sequence
          Length = 300896

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    aacaaaggcaacaacaacgc 44
             ||||||||||||||||||||
Sbjct: 87427 aacaaaggcaacaacaacgc 87408
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>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    cgtcttgaggcaggtgttct 450
              ||||||||||||||||||||
Sbjct: 121878 cgtcttgaggcaggtgttct 121897
to top
>gb|L37298.1|HUMMECP Homo sapiens methyl-CpG-binding protein (MeCP-2) mRNA, complete cds
          Length = 1669

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1140 gcgcagcagcagcgcctcct 1159
to top
>gb|BC011612.1| Homo sapiens methyl CpG binding protein 2 (Rett syndrome), mRNA (cDNA
            clone MGC:10245 IMAGE:3956518), complete cds
          Length = 1716

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1143 gcgcagcagcagcgcctcct 1162
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>emb|X89430.1|HSRNACPGB H.sapiens mRNA for methyl CpG binding protein 2
          Length = 2351

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1030 gcgcagcagcagcgcctcct 1049
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>emb|X94628.1|HSMECP2 H.sapiens MeCP-2 gene
          Length = 2718

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 gcgcagcagcagcgcctcct 396
           ||||||||||||||||||||
Sbjct: 730 gcgcagcagcagcgcctcct 711
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>emb|X99686.1|HSMECP2X H.sapiens mRNA for methyl-CpG-binding protein 2
          Length = 1533

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1133 gcgcagcagcagcgcctcct 1152
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>emb|Y12643.1|HSMECPG2 H.sapiens mRNA for methyl-CpG-binding protein 2
          Length = 1652

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gcgcagcagcagcgcctcct 396
            ||||||||||||||||||||
Sbjct: 1123 gcgcagcagcagcgcctcct 1142
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>dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171
              region, complete sequence
          Length = 158063

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    cgtcttgaggcaggtgttct 450
              ||||||||||||||||||||
Sbjct: 121878 cgtcttgaggcaggtgttct 121897


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,457,472
Number of Sequences: 3902068
Number of extensions: 3457472
Number of successful extensions: 85310
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84997
Number of HSP's gapped (non-prelim): 305
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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