ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd14g11 |
|---|---|
| Clone Library Name | barley_pub |
>ESPL1_HUMAN (Q14674) Separin (EC 3.4.22.49) (Separase) (Caspase-like protein| ESPL1) (Extra spindle poles-like 1 protein) Length = 2120 Score = 37.7 bits (86), Expect = 0.031 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Frame = +2 Query: 272 AMTEGNNNSCC*QRAGEGSWGWTDP---KLPGMDPTKHQGDASSWRCRR 409 A+T+ SCC + SWGW P +PG +P+K QG S R R+ Sbjct: 1273 ALTKLGGLSCCTTQLFASSWGWQPPLIKSVPGSEPSKTQGQKRSGRGRQ 1321
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 35.0 bits (79), Expect = 0.20 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 6/51 (11%) Frame = -1 Query: 558 HPRRPGRPSTRHRP-DPAWFPLTHPVPPPLR-----TTHTPFATPPGCVYP 424 H +P +P H+P P + P P PPP T+TP P VYP Sbjct: 56 HGHKPEKPPKEHKPTPPTYTPSPKPTPPPATPKPTPPTYTPSPKPKSPVYP 106
>NIF1_SCHPO (P87159) Mitosis inhibitor nif1 (Nim1-interacting factor 1)| Length = 681 Score = 33.5 bits (75), Expect = 0.58 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = -1 Query: 558 HPRRPGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPGCVYPTAI 415 H P R ++ P P HP PP R T AT P + PT I Sbjct: 184 HEIEPPRTASNTSPTPNSIKSAHPAEPPKRPAFTRSATSPDKILPTRI 231
>BRO1_CRYNE (Q5KE13) Vacuolar protein-sorting protein BRO1 (BRO domain-containing| protein 1) Length = 957 Score = 32.7 bits (73), Expect = 0.99 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = -1 Query: 591 PAGAMDAQGELHPRR-PGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPG 436 P A + Q + P++ P P RP A P P PP+++ H+P+A PPG Sbjct: 866 PQQAYNQQSYIPPQQNPYYPPPPSRPTYASPPFA-PQQPPMQSGHSPYAPPPG 917
>TRA1_CAEBR (Q17308) Sex-determining transformer protein 1| Length = 1165 Score = 32.3 bits (72), Expect = 1.3 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -1 Query: 549 RPGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPGCVYPTAIDGL 406 RP S R RPD H +PPP P+ PP + P A G+ Sbjct: 392 RPPNYSNRRRPD-------HRMPPPTSAMSHPYLAPPHVLPPVAAPGV 432
>KR103_HUMAN (P60369) Keratin-associated protein 10-3 (Keratin-associated| protein 10.3) (High sulfur keratin-associated protein 10.3) (Keratin-associated protein 18-3) (Keratin-associated protein 18.3) Length = 221 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -2 Query: 497 SPTPCRLLCAPPIHL--SPLRRAAFTPQPLMASCTSSST 387 +P PC L P+ SP +AA P P + CTSS T Sbjct: 38 APAPCLTLVCTPVSCVSSPCCQAACEPSPCQSGCTSSCT 76
>IP3KB_RAT (P42335) Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol| 1,4,5-trisphosphate 3-kinase B) (IP3K B) (IP3 3-kinase B) (IP3K-B) Length = 934 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = -2 Query: 512 RLG-SRSPTPCRLLCAPPIHLSPLRRAAFTPQPLMASCTSSSTRRLDAWSD 363 RLG +RSP+PC P R ++ P+ ++A C+ S RR +W + Sbjct: 173 RLGRARSPSPC-----------PFRSSSQPPERVLAPCSPSEERRTKSWGE 212
>POLG_HCVVO (O92531) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3015 Score = 32.0 bits (71), Expect = 1.7 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 10/60 (16%) Frame = -1 Query: 564 ELHPRRPGRPSTRHRPDPAWFPLTHPV-------PPPLRTTHTPFATPP---GCVYPTAI 415 E R P P+ HRP+ FP P+ PP L T P PP GC P+ + Sbjct: 2263 EYDDREPSVPAECHRPNRPKFPPALPIWARPDYNPPLLETWKKPDYAPPLVHGCALPSPV 2322
>ZN385_HUMAN (Q96PM9) Zinc finger protein 385 (Hematopoietic zinc finger| protein) (Retinal zinc finger protein) Length = 366 Score = 31.6 bits (70), Expect = 2.2 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = -1 Query: 549 RPGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPP 439 RP + + P PL HP P P+RT H P P Sbjct: 329 RPAPAAPLLQGPPITHPLLHPAPGPIRTAHGPILFSP 365
>TRRAP_HUMAN (Q9Y4A5) Transformation/transcription domain-associated protein| (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog) Length = 3859 Score = 31.6 bits (70), Expect = 2.2 Identities = 18/49 (36%), Positives = 20/49 (40%) Frame = -1 Query: 585 GAMDAQGELHPRRPGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPP 439 GA++A P P P P P P P PPP T TP PP Sbjct: 478 GAVEAALPGVPTAPAAPGPAPSPAPVPAPPPPPPPPPPATPVTPAPVPP 526
>ATI2_HHV1F (P08314) Alpha trans-inducing factor 77 kDa protein| Length = 715 Score = 31.6 bits (70), Expect = 2.2 Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 5/50 (10%) Frame = -1 Query: 567 GELHPRRPGRPSTRHRPDPAWFPLTHPVP-----PPLRTTHTPFATPPGC 433 G R P P T DP P P PPL P A PPGC Sbjct: 461 GPARQRAPAPPPTSPTLDPRGHPAVPEAPRGRPAPPLPDADDPVAEPPGC 510
>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated| protein 10.1) (High sulfur keratin-associated protein 10.1) (Keratin-associated protein 18-1) (Keratin-associated protein 18.1) Length = 282 Score = 31.6 bits (70), Expect = 2.2 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -2 Query: 497 SPTPCRLLCAPPIHL--SPLRRAAFTPQPLMASCTSSST 387 +P PC L P+ SP +AA P P + CTSS T Sbjct: 38 APAPCLTLVCTPVSRVSSPCCQAACEPSPCQSGCTSSCT 76
>PHC3_MOUSE (Q8CHP6) Polyhomeotic-like protein 3| Length = 981 Score = 30.8 bits (68), Expect = 3.7 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 6/70 (8%) Frame = -2 Query: 587 QALWMPK---GSSTRDGPGVLQRATDQIRLGSR--SPTPCRLLCAPPIHLSPLRRAAF-T 426 QAL P S+ + GP + Q A DQ++ ++ P+ L +P +H+ P++++A + Sbjct: 414 QALIQPHPLVSSALQTGPNLQQAAADQVQSTAQLNLPSHLPLPASPVVHIGPVQQSALVS 473 Query: 425 PQPLMASCTS 396 P M S TS Sbjct: 474 PGQQMVSPTS 483
>GLU2_MAIZE (P04706) Glutelin-2 precursor (Zein-gamma) (27 kDa zein)| (Alcohol-soluble reduced glutelin) (ASG) (Zein ZC2) Length = 223 Score = 30.8 bits (68), Expect = 3.7 Identities = 14/39 (35%), Positives = 16/39 (41%) Frame = -1 Query: 537 PSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPGCVYPT 421 P H P P P +PPP+ PP C YPT Sbjct: 49 PPPVHLPPPVHLPPPVHLPPPVHVPPPVHLPPPPCHYPT 87
>KR107_HUMAN (P60409) Keratin-associated protein 10-7 (Keratin-associated| protein 10.7) (High sulfur keratin-associated protein 10.7) (Keratin-associated protein 18-7) (Keratin-associated protein 18.7) Length = 370 Score = 30.8 bits (68), Expect = 3.7 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -2 Query: 497 SPTPC-RLLCAPPIHLS-PLRRAAFTPQPLMASCTSSST 387 +P PC L+C P ++S P R P P + CTSS T Sbjct: 48 APAPCLSLVCTPVSYVSSPCCRVTCEPSPCQSGCTSSCT 86
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 30.4 bits (67), Expect = 4.9 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Frame = -2 Query: 527 ATDQIRLGSRSPTPCRLLCAPPIHLSPLRRAAFTPQP----LMASCTSSSTRRLDAWSDP 360 +T IR SR+P P ++ A P+RR + TP+P AS + S RR+ + S Sbjct: 735 STRPIRRVSRTPEPKKIKKAASPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSS-SRS 793 Query: 359 YRGASDLSIPNCPRQPS 309 G+ + + P PS Sbjct: 794 VSGSPEPAAKKPPAPPS 810
>ESPL1_MOUSE (P60330) Separin (EC 3.4.22.49) (Separase) (Caspase-like protein| ESPL1) (Extra spindle poles-like 1 protein) Length = 2118 Score = 30.4 bits (67), Expect = 4.9 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%) Frame = +2 Query: 296 SCC*QRAGEGSWGWTDP---KLPGMDPTKHQGDASSWRCRR 409 SCC SWGW P LP ++P K + S R RR Sbjct: 1276 SCCTSELFASSWGWHPPLVKSLPVLEPAKIRRQKCSGRGRR 1316
>EXTN_MAIZE (P14918) Extensin precursor (Proline-rich glycoprotein)| Length = 267 Score = 30.4 bits (67), Expect = 4.9 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = -1 Query: 555 PRRPGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPP 439 P+ P T P+ P THP P P T+TP PP Sbjct: 152 PKPPTPKPTPPTYTPSPKPPTHPTPKPTPPTYTPSPKPP 190
>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)| Length = 426 Score = 30.4 bits (67), Expect = 4.9 Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 1/57 (1%) Frame = -1 Query: 591 PAGAMDAQGELHPRRPGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPGCV-YP 424 P A P P P P PA P T PPP R +P PP V YP Sbjct: 185 PVKAPSPSPAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPPVAYP 241
>PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) Length = 1636 Score = 30.0 bits (66), Expect = 6.4 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -1 Query: 546 PGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPGCVYP 424 P + R P PA P PVPPP + TP+ P G P Sbjct: 892 PSHTAPRPNPTPAPPPPCFPVPPP-QPLPTPYTYPAGAKQP 931
>FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 536 Score = 30.0 bits (66), Expect = 6.4 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -1 Query: 546 PGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPG 436 PG P T H P P + P PPP +T P PPG Sbjct: 302 PGAPPT-HLPPPPFLP-----PPPTVSTAPPLIPPPG 332
>FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 588 Score = 30.0 bits (66), Expect = 6.4 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -1 Query: 546 PGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPG 436 PG P T H P P + P PPP +T P PPG Sbjct: 347 PGAPPT-HLPPPPFLP-----PPPTVSTAPPLIPPPG 377
>FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| (Factor interacting with PAP) (hFip1) (Rearranged in hypereosinophilia) Length = 594 Score = 30.0 bits (66), Expect = 6.4 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -1 Query: 546 PGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPG 436 PG P T H P P + P PPP +T P PPG Sbjct: 362 PGAPPT-HLPPPPFLP-----PPPTVSTAPPLIPPPG 392
>STRC_MOUSE (Q8VIM6) Stereocilin precursor| Length = 1809 Score = 30.0 bits (66), Expect = 6.4 Identities = 18/46 (39%), Positives = 19/46 (41%) Frame = -1 Query: 561 LHPRRPGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPGCVYP 424 + P P P T RP P T P PPP T P T P V P Sbjct: 374 IKPATPRPPPTTPRPPP-----TTPQPPPTTTQPIPDTTQPPPVTP 414
>PRELP_MOUSE (Q9JK53) Prolargin precursor (Proline-arginine-rich end| leucine-rich repeat protein) Length = 378 Score = 30.0 bits (66), Expect = 6.4 Identities = 18/46 (39%), Positives = 21/46 (45%) Frame = -1 Query: 573 AQGELHPRRPGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPG 436 AQG+ P RP +P R +P P P P P T P PPG Sbjct: 19 AQGQ--PTRP-KPGIRRKPKPRPTPRFPQAPEPAEPTDLPPPLPPG 61
>KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-associated| protein 10.12) (High sulfur keratin-associated protein 10.12) (Keratin-associated protein 18-12) (Keratin-associated protein 18.12) Length = 245 Score = 30.0 bits (66), Expect = 6.4 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -2 Query: 497 SPTPC-RLLCAPPIHLS-PLRRAAFTPQPLMASCTSSST 387 +P PC L+C P +S P R P P + CTSS T Sbjct: 43 APAPCLSLVCTPVSRVSSPCCRVTCEPSPCQSGCTSSCT 81
>FIP1_MOUSE (Q9D824) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 581 Score = 30.0 bits (66), Expect = 6.4 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -1 Query: 546 PGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPG 436 PG P T H P P + P PPP +T P PPG Sbjct: 338 PGAPPT-HLPPPPFLP-----PPPTVSTAPPLIPPPG 368
>POLG_BVDVC (Q96662) Genome polyprotein [Contains: N-terminal protease (EC| 3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Nonstructural protein 2 Length = 3907 Score = 30.0 bits (66), Expect = 6.4 Identities = 13/49 (26%), Positives = 26/49 (53%) Frame = -3 Query: 187 HAVAQSRTNYIRSMSSWGRIQGGINGFSASGFFSIEHMATWADSTRGLL 41 H +AQ + S +W +++ G+N A+GF +++ DS + L+ Sbjct: 3381 HTIAQPSLRHTYSDVTWEQLEAGVNRKGAAGFLEKKNVGEVLDSEKHLV 3429
>GDF6_HUMAN (Q6KF10) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 455 Score = 29.6 bits (65), Expect = 8.3 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 501 PLTHPVPPPLRTTHTPFATPPGCVYPTAIDGLLHLQLDA 385 P H + L + P +TPP C PT + + L +DA Sbjct: 397 PTNHAIIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDA 435
>GDF6_BOVIN (P55106) Growth/differentiation factor 6 precursor (GDF-6)| (Cartilage-derived morphogenetic protein 2) (CDMP-2) (Fragment) Length = 436 Score = 29.6 bits (65), Expect = 8.3 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 501 PLTHPVPPPLRTTHTPFATPPGCVYPTAIDGLLHLQLDA 385 P H + L + P +TPP C PT + + L +DA Sbjct: 378 PTNHAIIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDA 416
>CSTN2_MOUSE (Q9ER65) Calsyntenin-2 precursor| Length = 966 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Frame = +1 Query: 334 MDRSEAPRYGSDQASRRRVELEVQE--AINGCGVNAARRSGERCMGGAQRRRHGVGEREP 507 M++ E P +G D+ + E E +E + + G + + E MG + + G + P Sbjct: 892 MEKHEGPGHGEDETTEGEEEEEAEEGSSSSSSGSDDSEEEEEEGMGRVRHGQSGTSSQSP 951 Query: 508 SR-IWSVA 528 R W+ A Sbjct: 952 ERSTWNTA 959
>SELV_HUMAN (P59797) Selenoprotein V| Length = 346 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -1 Query: 519 PDPAWFPLTHPVPPPLRTTHTPFATPPGCVYP 424 P PAW P P P P+R TP TP + P Sbjct: 88 PAPAWIPTPVPTPVPVRNP-TPVPTPARTLTP 118
>GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 454 Score = 29.6 bits (65), Expect = 8.3 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 501 PLTHPVPPPLRTTHTPFATPPGCVYPTAIDGLLHLQLDA 385 P H + L + P +TPP C PT + + L +DA Sbjct: 396 PTNHAIIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDA 434
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 29.6 bits (65), Expect = 8.3 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -1 Query: 534 STRHRPDPAWFPLTHPVPPPLRTTHTPFATPPGCVYPTAIDGLLH 400 +T +P+ P T P+PP L TT T A V P++ G H Sbjct: 2671 ATGSTTNPSSTPGTRPIPPVLTTTATTPAATSSTVTPSSALGTTH 2715
>GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 452 Score = 29.6 bits (65), Expect = 8.3 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 501 PLTHPVPPPLRTTHTPFATPPGCVYPTAIDGLLHLQLDA 385 P H + L + P +TPP C PT + + L +DA Sbjct: 394 PTNHAIIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDA 432
>SYE_METMA (Q8PW52) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 571 Score = 29.6 bits (65), Expect = 8.3 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 3/92 (3%) Frame = +2 Query: 116 DPSLDSTPRTHGSDVVGSTLRYCVCLCKNEGAAYIKLTQRSRLSHHEFVTNIAMTEGNNN 295 D L T G D++ S R + K G Y K T R+ HEF G + Sbjct: 295 DHELGMTHIIRGKDLIDSEKRQTY-IYKYFGWTYPKTTHWGRVKIHEF--------GKFS 345 Query: 296 SCC*QRA---GEGSWGWTDPKLPGMDPTKHQG 382 + ++A GE S GW DP+LP + + +G Sbjct: 346 TSTLRKAIESGEYS-GWDDPRLPTIRAIRRRG 376
>SOX30_MACFA (Q8WNV5) Transcription factor SOX-30| Length = 753 Score = 29.6 bits (65), Expect = 8.3 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 3/36 (8%) Frame = -1 Query: 537 PSTRHRPDPAWFPLTHP---VPPPLRTTHTPFATPP 439 P R P P P+ HP PPPL T F TPP Sbjct: 573 PCPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTPP 608
>SOX30_HUMAN (O94993) Transcription factor SOX-30| Length = 753 Score = 29.6 bits (65), Expect = 8.3 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 3/36 (8%) Frame = -1 Query: 537 PSTRHRPDPAWFPLTHP---VPPPLRTTHTPFATPP 439 P R P P P+ HP PPPL T F TPP Sbjct: 573 PCPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTPP 608
>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)| Length = 640 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/39 (43%), Positives = 17/39 (43%) Frame = -1 Query: 552 RRPGRPSTRHRPDPAWFPLTHPVPPPLRTTHTPFATPPG 436 R PG PS P P P P PPP R P PPG Sbjct: 408 RPPGLPSALRGPMPRLLP---PGPPPGRPPGPPPGPPPG 443 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,203,147 Number of Sequences: 219361 Number of extensions: 2150264 Number of successful extensions: 8554 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 7407 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8449 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
