>P54_ENTFC (P13692) Protein P54 precursor|
          Length = 516

 Score = 33.1 bits (74), Expect = 0.87
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
 Frame = -1

Query: 664 RLHEQLEVQRSLQLRIEEQGK--CLQIMIEQQCNPAADKALDASTSAEGSKLPSDPPESS 491
           RL EQ   Q++ Q + E++ +        + Q   +A    ++S++A+ S   S  PESS
Sbjct: 236 RLAEQAR-QQAAQEKAEKEAREQAAAQAAQTQALSSASTTTESSSAAQSSSEESKAPESS 294

Query: 490 TVKDVPNNSQNGTTERAESGDKE*RSN 410
           T ++  +   + TTE + +G     S+
Sbjct: 295 TTEESTSTESSTTTENSSTGSSSTESS 321

>MIER1_HUMAN (Q8N108) Mesoderm induction early response protein 1 (Mi-er1)|
           (hmi-er1) (Early response 1) (Er1)
          Length = 536

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 559 DKALDASTSAEGSKLPSDPPESSTVKDVPNNSQNGTTERA 440
           D+ LD S SA  S+ PS PP +S   +  +  ++GT   A
Sbjct: 385 DRLLDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTA 424

>MIER1_PONPY (Q5REE1) Mesoderm induction early response protein 1 (Mi-er1)|
          Length = 512

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 559 DKALDASTSAEGSKLPSDPPESSTVKDVPNNSQNGT 452
           D+ LD S SA  S+ PS PP +S   +  +  ++GT
Sbjct: 361 DRLLDESESAASSRAPSPPPTASNSSNSQSEKEDGT 396

>SCNAA_CHICK (Q92075) Amiloride-sensitive sodium channel alpha-subunit|
           (Epithelial Na+ channel alpha subunit) (Alpha ENaC)
           (Nonvoltage-gated sodium channel 1 alpha subunit)
           (SCNEA) (Alpha NaCH)
          Length = 637

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 277 LNLVQRNAHPFLPQIKDNLILVSQQAVKLKSNSWLVGFTSSGEH 408
           L+ VQR  HP   Q +DNL+ + + +  +  N W +GF    E+
Sbjct: 179 LHHVQR--HPLRRQKRDNLVSLPENSPSVDKNDWKIGFVLCSEN 220

>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)|
          Length = 707

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -1

Query: 562 ADKALDASTSAEGSKLPSDPPESSTVKDVPNNSQNGTTERAESGD 428
           A++ LD   SA+  KL      +ST +   N+ +NGT+  AE+GD
Sbjct: 206 AERKLDRVRSAQVQKLEQQALANSTTRQTTND-ENGTSSIAENGD 249

>K0355_HUMAN (O15063) Protein KIAA0355|
          Length = 1070

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 545 IQRLVCSRIALLLDHNLKALPLLLDSQLQ 631
           +Q+L CS+ A + +H LK L + +DS LQ
Sbjct: 254 VQQLFCSQSAAIPEHQLKELNIKIDSALQ 282

>LNT_RHOPA (P61036) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase)
          Length = 536

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 19/63 (30%), Positives = 27/63 (42%)
 Frame = +1

Query: 265 GTVQLNLVQRNAHPFLPQIKDNLILVSQQAVKLKSNSWLVGFTSSGEHG*IFIPYHLILL 444
           G  + NL   NA P LP I    I   + A+      W++  T+ G  G    PY  +  
Sbjct: 394 GVARHNLELPNAPPLLPLICYEAIFPDEIAIGNNRPGWMLNLTNDGWFGISSGPYQHLQQ 453

Query: 445 ARL 453
           AR+
Sbjct: 454 ARM 456

>LDLR_RAT (P35952) Low-density lipoprotein receptor precursor (LDL receptor)|
          Length = 879

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = -1

Query: 571 NPAADKALDASTSAEGSKLPSDPPESSTVKDVPNNSQNGTTERAESGDKE*RSNHALLKM 392
           +P+A +  +  ++   S+ P D PE STV+ V  +SQ    + A  GD+  R     L +
Sbjct: 753 DPSATRHNEDPSATSTSRQPGDTPELSTVESVTVSSQ-VQGDMAGRGDEVQRHGVGFLSI 811

Query: 391 *TPLAM 374
             P+A+
Sbjct: 812 FLPIAL 817


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,163,249
Number of Sequences: 219361
Number of extensions: 1868993
Number of successful extensions: 4582
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4582
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7309604013
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)