ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506295.1| PREDICTED Oryza sativa (japonica cultivar-group... 232 1e-57
2ref|XM_477827.1| Oryza sativa (japonica cultivar-group), mRNA 232 1e-57
3dbj|AK100065.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
4dbj|AK060412.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 172 1e-39
6dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic D... 172 1e-39
7dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic D... 172 1e-39
8gb|AY105646.1| Zea mays PCO146542 mRNA sequence 113 8e-22
9gb|DQ100348.1| Zea mays carotenoid cleavage dioxygenase 1 (CCD1)... 105 2e-19
10ref|XM_475467.1| Oryza sativa (japonica cultivar-group), predic... 62 3e-06
11dbj|AK069306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 3e-06
12dbj|AK061987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 3e-06
13gb|AY625680.1| Triticum aestivum MYB transcription factor (MYB80... 56 2e-04
14gb|AY019185.1| Oryza sativa microsatellite MRG1510 containing (A... 52 0.003
15ref|XM_474250.1| Oryza sativa (japonica cultivar-group), predic... 48 0.040
16dbj|AK101951.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.040
17dbj|AB017693.1| Nicotiana tabacum WERBP-1 mRNA, complete cds 48 0.040
18gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome 44 0.63
19gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.63
20gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL03... 44 0.63
21gb|AC135461.11| Medicago truncatula clone mth2-34f24, complete s... 44 0.63
22gb|AC137701.25| Medicago truncatula clone mth2-35h1, complete se... 44 0.63
23dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
24dbj|AK071731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.63
25gb|AC114569.7| Mus musculus chromosome 6, clone RP23-139J6, comp... 42 2.5
26dbj|AP000419.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.5
27gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, co... 40 9.8
28ref|XM_481816.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.8
29ref|XM_483734.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.8
30gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromo... 40 9.8
31gb|AC161123.3| Pan troglodytes BAC clone CH251-618D5 from chromo... 40 9.8
32gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, co... 40 9.8
33emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chro... 40 9.8
34gb|AC124201.4| Mus musculus BAC clone RP23-329B24 from chromosom... 40 9.8
35emb|AL596207.10| Mouse DNA sequence from clone RP23-336J1 on chr... 40 9.8
36emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4,... 40 9.8
37emb|AJ635272.1| Prunus avium partial S-RNase gene for ribonuclea... 40 9.8
38gb|AC091919.3| Homo sapiens chromosome 5 clone RP11-24M12, compl... 40 9.8
39dbj|AK137125.1| Mus musculus 12 days embryo embryonic body betwe... 40 9.8
40dbj|AK149851.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 9.8
41gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, com... 40 9.8
42dbj|AK032044.1| Mus musculus adult male medulla oblongata cDNA, ... 40 9.8
43dbj|AK079336.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 9.8
44dbj|AK034353.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 9.8
45dbj|AK041972.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 9.8
46dbj|AK011266.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 9.8
47dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
48dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
49gb|AC009058.10| Homo sapiens chromosome 16 clone RP11-292B23, co... 40 9.8
50gb|AC005075.2|AC005075 Homo sapiens BAC clone CTA-219E16 from 7,... 40 9.8
51gb|AC009024.6|AC009024 Homo sapiens chromosome 16 clone RP11-112... 40 9.8
52dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
53dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
54dbj|AK104837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
55dbj|AK068463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
56emb|CT025725.10| Mouse DNA sequence from clone RP23-477K5 on chr... 40 9.8
57emb|AL845166.8| Mouse DNA sequence from clone RP23-236H15 on chr... 40 9.8 
>ref|XM_506295.1| PREDICTED Oryza sativa (japonica cultivar-group), P0443H10.4 mRNA
          Length = 1940

 Score =  232 bits (117), Expect = 1e-57
 Identities = 247/289 (85%), Gaps = 1/289 (0%)
 Strand = Plus / Minus

                                                                        
Query: 429  tcacctgattctgctcgctcggttgttccattttgactgttatttggaacatccttcacg 488
            ||||||||||||| | | | || | |||| || |||||||| | ||||||||||||||||
Sbjct: 1469 tcacctgattctgtttgtttggctattccgttctgactgttctctggaacatccttcacg 1410

                                                                        
Query: 489  gtagaagattctggggggtcagaaggtaactttgatccttctgccgacgttgaagcatcc 548
            | ||||||||||||  | ||||||| |  ||||| ||||||||| || ||||||||||||
Sbjct: 1409 gcagaagattctggaagatcagaagatggctttgttccttctgctgaggttgaagcatcc 1350

                                                                        
Query: 549  agcgccttgtctgcagcaggattgcattgctgctcgatcataatctgaaggcacttccct 608
            | |||||||||||   ||||  |||| |||||||||| ||| ||||||||||||||||||
Sbjct: 1349 accgccttgtctgtcccaggtatgcactgctgctcgagcatcatctgaaggcacttccct 1290

                                                                        
Query: 609  tgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggagccgcttt 668
            |||||||| ||||||||||||| ||||||||| | |||||| |||||||| |||| | ||
Sbjct: 1289 tgctcctcaattctcagctgcaaacttctttggatctcaagctgttcatgaagcctc-tt 1231

                                                             
Query: 669  ttgaagttctaactggagacgtaatgcttcggtgagatcaaaattccct 717
            ||| ||||||||||||||||| ||||| || ||||||||||| ||||||
Sbjct: 1230 ttggagttctaactggagacgcaatgcctcagtgagatcaaagttccct 1182



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                       
Query: 155  agaagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 212
            |||||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 1778 agaagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 1720
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>ref|XM_477827.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1873

 Score =  232 bits (117), Expect = 1e-57
 Identities = 247/289 (85%), Gaps = 1/289 (0%)
 Strand = Plus / Minus

                                                                        
Query: 429  tcacctgattctgctcgctcggttgttccattttgactgttatttggaacatccttcacg 488
            ||||||||||||| | | | || | |||| || |||||||| | ||||||||||||||||
Sbjct: 1487 tcacctgattctgtttgtttggctattccgttctgactgttctctggaacatccttcacg 1428

                                                                        
Query: 489  gtagaagattctggggggtcagaaggtaactttgatccttctgccgacgttgaagcatcc 548
            | ||||||||||||  | ||||||| |  ||||| ||||||||| || ||||||||||||
Sbjct: 1427 gcagaagattctggaagatcagaagatggctttgttccttctgctgaggttgaagcatcc 1368

                                                                        
Query: 549  agcgccttgtctgcagcaggattgcattgctgctcgatcataatctgaaggcacttccct 608
            | |||||||||||   ||||  |||| |||||||||| ||| ||||||||||||||||||
Sbjct: 1367 accgccttgtctgtcccaggtatgcactgctgctcgagcatcatctgaaggcacttccct 1308

                                                                        
Query: 609  tgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggagccgcttt 668
            |||||||| ||||||||||||| ||||||||| | |||||| |||||||| |||| | ||
Sbjct: 1307 tgctcctcaattctcagctgcaaacttctttggatctcaagctgttcatgaagcctc-tt 1249

                                                             
Query: 669  ttgaagttctaactggagacgtaatgcttcggtgagatcaaaattccct 717
            ||| ||||||||||||||||| ||||| || ||||||||||| ||||||
Sbjct: 1248 ttggagttctaactggagacgcaatgcctcagtgagatcaaagttccct 1200



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                       
Query: 155  agaagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 212
            |||||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 1796 agaagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 1738
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>dbj|AK100065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160O05, full
            insert sequence
          Length = 1941

 Score =  232 bits (117), Expect = 1e-57
 Identities = 247/289 (85%), Gaps = 1/289 (0%)
 Strand = Plus / Minus

                                                                        
Query: 429  tcacctgattctgctcgctcggttgttccattttgactgttatttggaacatccttcacg 488
            ||||||||||||| | | | || | |||| || |||||||| | ||||||||||||||||
Sbjct: 1469 tcacctgattctgtttgtttggctattccgttctgactgttctctggaacatccttcacg 1410

                                                                        
Query: 489  gtagaagattctggggggtcagaaggtaactttgatccttctgccgacgttgaagcatcc 548
            | ||||||||||||  | ||||||| |  ||||| ||||||||| || ||||||||||||
Sbjct: 1409 gcagaagattctggaagatcagaagatggctttgttccttctgctgaggttgaagcatcc 1350

                                                                        
Query: 549  agcgccttgtctgcagcaggattgcattgctgctcgatcataatctgaaggcacttccct 608
            | |||||||||||   ||||  |||| |||||||||| ||| ||||||||||||||||||
Sbjct: 1349 accgccttgtctgtcccaggtatgcactgctgctcgagcatcatctgaaggcacttccct 1290

                                                                        
Query: 609  tgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggagccgcttt 668
            |||||||| ||||||||||||| ||||||||| | |||||| |||||||| |||| | ||
Sbjct: 1289 tgctcctcaattctcagctgcaaacttctttggatctcaagctgttcatgaagcctc-tt 1231

                                                             
Query: 669  ttgaagttctaactggagacgtaatgcttcggtgagatcaaaattccct 717
            ||| ||||||||||||||||| ||||| || ||||||||||| ||||||
Sbjct: 1230 ttggagttctaactggagacgcaatgcctcagtgagatcaaagttccct 1182



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                       
Query: 155  agaagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 212
            |||||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 1778 agaagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 1720
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>dbj|AK060412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E04, full
            insert sequence
          Length = 1873

 Score =  232 bits (117), Expect = 1e-57
 Identities = 247/289 (85%), Gaps = 1/289 (0%)
 Strand = Plus / Minus

                                                                        
Query: 429  tcacctgattctgctcgctcggttgttccattttgactgttatttggaacatccttcacg 488
            ||||||||||||| | | | || | |||| || |||||||| | ||||||||||||||||
Sbjct: 1487 tcacctgattctgtttgtttggctattccgttctgactgttctctggaacatccttcacg 1428

                                                                        
Query: 489  gtagaagattctggggggtcagaaggtaactttgatccttctgccgacgttgaagcatcc 548
            | ||||||||||||  | ||||||| |  ||||| ||||||||| || ||||||||||||
Sbjct: 1427 gcagaagattctggaagatcagaagatggctttgttccttctgctgaggttgaagcatcc 1368

                                                                        
Query: 549  agcgccttgtctgcagcaggattgcattgctgctcgatcataatctgaaggcacttccct 608
            | |||||||||||   ||||  |||| |||||||||| ||| ||||||||||||||||||
Sbjct: 1367 accgccttgtctgtcccaggtatgcactgctgctcgagcatcatctgaaggcacttccct 1308

                                                                        
Query: 609  tgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggagccgcttt 668
            |||||||| ||||||||||||| ||||||||| | |||||| |||||||| |||| | ||
Sbjct: 1307 tgctcctcaattctcagctgcaaacttctttggatctcaagctgttcatgaagcctc-tt 1249

                                                             
Query: 669  ttgaagttctaactggagacgtaatgcttcggtgagatcaaaattccct 717
            ||| ||||||||||||||||| ||||| || ||||||||||| ||||||
Sbjct: 1248 ttggagttctaactggagacgcaatgcctcagtgagatcaaagttccct 1200



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                       
Query: 155  agaagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 212
            |||||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 1796 agaagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 1738
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  172 bits (87), Expect = 1e-39
 Identities = 156/179 (87%)
 Strand = Plus / Minus

                                                                            
Query: 462      tgactgttatttggaacatccttcacggtagaagattctggggggtcagaaggtaacttt 521
                |||||||| | ||||||||||||||||| ||||||||||||  | ||||||| |  ||||
Sbjct: 14705195 tgactgttctctggaacatccttcacggcagaagattctggaagatcagaagatggcttt 14705136

                                                                            
Query: 522      gatccttctgccgacgttgaagcatccagcgccttgtctgcagcaggattgcattgctgc 581
                | ||||||||| || ||||||||||||| |||||||||||   ||||  |||| ||||||
Sbjct: 14705135 gttccttctgctgaggttgaagcatccaccgccttgtctgtcccaggtatgcactgctgc 14705076

                                                                           
Query: 582      tcgatcataatctgaaggcacttcccttgctcctcgattctcagctgcagacttctttg 640
                |||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 14705075 tcgagcatcatctgaaggcacttcccttgctcctcaattctcagctgcaaacttctttg 14705017



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 65/74 (87%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                            
Query: 642      acctcaagttgttcatggagccgctttttgaagttctaactggagacgtaatgcttcggt 701
                |||||||| |||||||| |||| ||||| || |||||||||||||||| ||||| || ||
Sbjct: 14704191 acctcaagctgttcatgaagcctcttttgga-gttctaactggagacgcaatgcctcagt 14704133

                              
Query: 702      gagatcaaaattcc 715
                ||||||||| ||||
Sbjct: 14704132 gagatcaaagttcc 14704119



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                           
Query: 155      agaagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 212
                |||||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 14705632 agaagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 14705574



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 591      atctgaaggcacttcccttgctcctc 616
                ||||||||||||||||||||||||||
Sbjct: 14706203 atctgaaggcacttcccttgctcctc 14706178



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 177      agtacatcagtgcgaatttgcttgcgctgccttctg 212
                ||||||||||||| |||||||||| ||||| |||||
Sbjct: 14716278 agtacatcagtgcaaatttgcttgtgctgcgttctg 14716243
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>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0443H10
          Length = 144695

 Score =  172 bits (87), Expect = 1e-39
 Identities = 156/179 (87%)
 Strand = Plus / Minus

                                                                         
Query: 462   tgactgttatttggaacatccttcacggtagaagattctggggggtcagaaggtaacttt 521
             |||||||| | ||||||||||||||||| ||||||||||||  | ||||||| |  ||||
Sbjct: 29962 tgactgttctctggaacatccttcacggcagaagattctggaagatcagaagatggcttt 29903

                                                                         
Query: 522   gatccttctgccgacgttgaagcatccagcgccttgtctgcagcaggattgcattgctgc 581
             | ||||||||| || ||||||||||||| |||||||||||   ||||  |||| ||||||
Sbjct: 29902 gttccttctgctgaggttgaagcatccaccgccttgtctgtcccaggtatgcactgctgc 29843

                                                                        
Query: 582   tcgatcataatctgaaggcacttcccttgctcctcgattctcagctgcagacttctttg 640
             |||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 29842 tcgagcatcatctgaaggcacttcccttgctcctcaattctcagctgcaaacttctttg 29784



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 65/74 (87%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                         
Query: 642   acctcaagttgttcatggagccgctttttgaagttctaactggagacgtaatgcttcggt 701
             |||||||| |||||||| |||| ||||| || |||||||||||||||| ||||| || ||
Sbjct: 28958 acctcaagctgttcatgaagcctcttttgga-gttctaactggagacgcaatgcctcagt 28900

                           
Query: 702   gagatcaaaattcc 715
             ||||||||| ||||
Sbjct: 28899 gagatcaaagttcc 28886



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                        
Query: 155   agaagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 212
             |||||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 30399 agaagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 30341



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 591   atctgaaggcacttcccttgctcctc 616
             ||||||||||||||||||||||||||
Sbjct: 30970 atctgaaggcacttcccttgctcctc 30945



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 177   agtacatcagtgcgaatttgcttgcgctgccttctg 212
             ||||||||||||| |||||||||| ||||| |||||
Sbjct: 41045 agtacatcagtgcaaatttgcttgtgctgcgttctg 41010
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>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0026I22
          Length = 143302

 Score =  172 bits (87), Expect = 1e-39
 Identities = 156/179 (87%)
 Strand = Plus / Minus

                                                                         
Query: 462   tgactgttatttggaacatccttcacggtagaagattctggggggtcagaaggtaacttt 521
             |||||||| | ||||||||||||||||| ||||||||||||  | ||||||| |  ||||
Sbjct: 98193 tgactgttctctggaacatccttcacggcagaagattctggaagatcagaagatggcttt 98134

                                                                         
Query: 522   gatccttctgccgacgttgaagcatccagcgccttgtctgcagcaggattgcattgctgc 581
             | ||||||||| || ||||||||||||| |||||||||||   ||||  |||| ||||||
Sbjct: 98133 gttccttctgctgaggttgaagcatccaccgccttgtctgtcccaggtatgcactgctgc 98074

                                                                        
Query: 582   tcgatcataatctgaaggcacttcccttgctcctcgattctcagctgcagacttctttg 640
             |||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 98073 tcgagcatcatctgaaggcacttcccttgctcctcaattctcagctgcaaacttctttg 98015



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 65/74 (87%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                         
Query: 642   acctcaagttgttcatggagccgctttttgaagttctaactggagacgtaatgcttcggt 701
             |||||||| |||||||| |||| ||||| || |||||||||||||||| ||||| || ||
Sbjct: 97189 acctcaagctgttcatgaagcctcttttgga-gttctaactggagacgcaatgcctcagt 97131

                           
Query: 702   gagatcaaaattcc 715
             ||||||||| ||||
Sbjct: 97130 gagatcaaagttcc 97117



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                        
Query: 155   agaagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 212
             |||||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 98630 agaagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 98572



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 591   atctgaaggcacttcccttgctcctc 616
             ||||||||||||||||||||||||||
Sbjct: 99201 atctgaaggcacttcccttgctcctc 99176



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 177    agtacatcagtgcgaatttgcttgcgctgccttctg 212
              ||||||||||||| |||||||||| ||||| |||||
Sbjct: 109276 agtacatcagtgcaaatttgcttgtgctgcgttctg 109241
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>gb|AY105646.1| Zea mays PCO146542 mRNA sequence
          Length = 645

 Score =  113 bits (57), Expect = 8e-22
 Identities = 128/149 (85%), Gaps = 2/149 (1%)
 Strand = Plus / Minus

                                                                       
Query: 571 tgcattgctgctcgatcataatctg-aaggcacttcccttgctcctcgattctcagctgc 629
           |||| |||||||| | ||| ||||| ||| ||||||||||| ||||||||||| ||||||
Sbjct: 317 tgcactgctgctctagcatcatctggaagacacttcccttgttcctcgattcttagctgc 258

                                                                       
Query: 630 agacttctttgcacctcaagttgttcatggagccgctttttgaagttctaactggagacg 689
           | ||||||||| | |||||| |||||||| |||||| ||||||||||| |||||||| | 
Sbjct: 257 aaacttctttgtatctcaagctgttcatgaagccgc-ttttgaagttccaactggagcct 199

                                        
Query: 690 taatgcttcggtgagatcaaaattccctt 718
            | |||||| |||||||||||| ||||||
Sbjct: 198 aagtgcttcagtgagatcaaaactccctt 170



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 43/49 (87%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                            
Query: 456 ccattttgactgttatttggaa-catccttcacggtagaagattctggg 503
           |||||||||| ||| | ||||| | ||||| ||||||||||||||||||
Sbjct: 442 ccattttgacggttttctggaaacttccttgacggtagaagattctggg 394
to top
>gb|DQ100348.1| Zea mays carotenoid cleavage dioxygenase 1 (CCD1) gene, partial cds
          Length = 6188

 Score =  105 bits (53), Expect = 2e-19
 Identities = 159/193 (82%), Gaps = 1/193 (0%)
 Strand = Plus / Plus

                                                                        
Query: 449  ggttgttccattttgactgttatttggaacatccttcacggtagaagattc-tggggggt 507
            ||||| ||||||||||||||| | |||||| ||||| |||||||||||||| |||    |
Sbjct: 2156 ggttgatccattttgactgttttctggaacttccttgacggtagaagattcctggaatct 2215

                                                                        
Query: 508  cagaaggtaactttgatccttctgccgacgttgaagcatccagcgccttgtctgcagcag 567
            |||||||| || |  || | ||||| |  |||||||||||| ||||||| |||||  | |
Sbjct: 2216 cagaaggtgacctcaattcatctgcagcggttgaagcatcctgcgccttttctgccccgg 2275

                                                                        
Query: 568  gattgcattgctgctcgatcataatctgaaggcacttcccttgctcctcgattctcagct 627
            |  |||| |||||||| | ||| |||||||| ||||||||||| ||||||||||| ||||
Sbjct: 2276 gtatgcactgctgctctagcatcatctgaagacacttcccttgttcctcgattcttagct 2335

                         
Query: 628  gcagacttctttg 640
            ||| |||||||||
Sbjct: 2336 gcaaacttctttg 2348
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>ref|XM_475467.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 774

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 601 acttcccttgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatgga 660
           ||||||||||  | || ||||||||||||||    |||||||||||||||||||||||||
Sbjct: 499 acttcccttgtgcttcaattctcagctgcagctgcctttgcacctcaagttgttcatgga 440

                  
Query: 661 gccgctt 667
           | |||||
Sbjct: 439 gtcgctt 433
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>dbj|AK069306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012H08, full
           insert sequence
          Length = 1823

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 601 acttcccttgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatgga 660
           ||||||||||  | || ||||||||||||||    |||||||||||||||||||||||||
Sbjct: 824 acttcccttgtgcttcaattctcagctgcagctgcctttgcacctcaagttgttcatgga 765

                  
Query: 661 gccgctt 667
           | |||||
Sbjct: 764 gtcgctt 758
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>dbj|AK061987.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B07, full
           insert sequence
          Length = 1535

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 601 acttcccttgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatgga 660
           ||||||||||  | || ||||||||||||||    |||||||||||||||||||||||||
Sbjct: 893 acttcccttgtgcttcaattctcagctgcagctgcctttgcacctcaagttgttcatgga 834

                  
Query: 661 gccgctt 667
           | |||||
Sbjct: 833 gtcgctt 827
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>gb|AY625680.1| Triticum aestivum MYB transcription factor (MYB80) mRNA, complete
           cds
          Length = 1199

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 60/68 (88%), Gaps = 2/68 (2%)
 Strand = Plus / Minus

                                                                       
Query: 601 acttcccttgctcctcgattctcagctgcagacttcttt-gcacctcaagttgttcatgg 659
           ||||||||||  | |||||||||||||||| ||| |||| | ||||| ||||||||||||
Sbjct: 565 acttcccttgtgcttcgattctcagctgca-actgcttttgaacctcgagttgttcatgg 507

                   
Query: 660 agccgctt 667
           ||||||||
Sbjct: 506 agccgctt 499
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>gb|AY019185.1| Oryza sativa microsatellite MRG1510 containing (AT)X28, genomic
           sequence
          Length = 256

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 591 atctgaaggcacttcccttgctcctc 616
           ||||||||||||||||||||||||||
Sbjct: 203 atctgaaggcacttcccttgctcctc 228
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>ref|XM_474250.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1260

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 602  cttcccttgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggag 661
            |||||| |||||||| || |||||||||||| |||| || | ||| || |||||||||||
Sbjct: 1068 cttcccctgctcctctatcctcagctgcagatttctctgaatctctagctgttcatggag 1009
to top
>dbj|AK101951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I07, full
            insert sequence
          Length = 1959

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 602  cttcccttgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggag 661
            |||||| |||||||| || |||||||||||| |||| || | ||| || |||||||||||
Sbjct: 1338 cttcccctgctcctctatcctcagctgcagatttctctgaatctctagctgttcatggag 1279
to top
>dbj|AB017693.1| Nicotiana tabacum WERBP-1 mRNA, complete cds
          Length = 1120

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 623 cagctgcagacttctttgcacctcaagttgttcatg 658
           |||||||||| ||||||| | |||||||||||||||
Sbjct: 589 cagctgcagatttctttgaatctcaagttgttcatg 554
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>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 34     gtttggtaccataaaacatgct 55
              ||||||||||||||||||||||
Sbjct: 159232 gtttggtaccataaaacatgct 159211
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>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0088I06, complete sequence
          Length = 187651

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 642   acctcaagttgttcatggagccgctt 667
             |||||||||||||||||||| |||||
Sbjct: 78266 acctcaagttgttcatggagtcgctt 78291
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>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene
            region
          Length = 58956

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 642  acctcaagttgttcatggagccgctt 667
            |||||||||||||||||||| |||||
Sbjct: 2622 acctcaagttgttcatggagtcgctt 2597
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>gb|AC135461.11| Medicago truncatula clone mth2-34f24, complete sequence
          Length = 132875

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 642   acctcaagttgttcatggagccgctt 667
             ||||||||||||||||| ||||||||
Sbjct: 28392 acctcaagttgttcatgaagccgctt 28417
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>gb|AC137701.25| Medicago truncatula clone mth2-35h1, complete sequence
          Length = 151417

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 642    acctcaagttgttcatggagccgctt 667
              ||||||||||||||||| ||||||||
Sbjct: 136123 acctcaagttgttcatgaagccgctt 136098
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 642      acctcaagttgttcatggagccgctt 667
                |||||||||||||||||||| |||||
Sbjct: 24009777 acctcaagttgttcatggagtcgctt 24009802
to top
>dbj|AK071731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114F03, full
           insert sequence
          Length = 1423

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 636 ctttgcacctcaagttgttcatggagccgctttt 669
           ||||||||||| | ||||||||| ||||||||||
Sbjct: 631 ctttgcacctctaattgttcatgtagccgctttt 598
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>gb|AC114569.7| Mus musculus chromosome 6, clone RP23-139J6, complete sequence
          Length = 179927

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 303    cccctttctcccacagataaa 323
              |||||||||||||||||||||
Sbjct: 127369 cccctttctcccacagataaa 127349
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>dbj|AP000419.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MVI11
          Length = 81875

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 65    agaggtggcagcgaatataacaaat 89
             ||||||||||| |||||||||||||
Sbjct: 77466 agaggtggcagagaatataacaaat 77490
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>gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, complete sequence
          Length = 180660

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    tttctcccacagataaaaga 326
              ||||||||||||||||||||
Sbjct: 176249 tttctcccacagataaaaga 176230
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>ref|XM_481816.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 924

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 636 ctttgcacctcaagttgttcatggagccgctt 667
           ||||||||||| | ||||||||| ||||||||
Sbjct: 464 ctttgcacctctaattgttcatgtagccgctt 433
to top
>ref|XM_483734.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2650

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 468  ttatttggaacatccttcac 487
            ||||||||||||||||||||
Sbjct: 1752 ttatttggaacatccttcac 1733
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>gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromosome 7, complete
             sequence
          Length = 190939

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 458   attttgactgttatttggaa 477
             ||||||||||||||||||||
Sbjct: 64863 attttgactgttatttggaa 64882
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>gb|AC161123.3| Pan troglodytes BAC clone CH251-618D5 from chromosome 7, complete
              sequence
          Length = 190856

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 458    attttgactgttatttggaa 477
              ||||||||||||||||||||
Sbjct: 129785 attttgactgttatttggaa 129804
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>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence
          Length = 225183

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    tttctcccacagataaaaga 326
              ||||||||||||||||||||
Sbjct: 218258 tttctcccacagataaaaga 218239
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>emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chromosome 17, complete
              sequence
          Length = 218000

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      gtgagaaacaaaggtaaata 20
              ||||||||||||||||||||
Sbjct: 109230 gtgagaaacaaaggtaaata 109211
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>gb|AC124201.4| Mus musculus BAC clone RP23-329B24 from chromosome 8, complete sequence
          Length = 234158

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    atggctagtggggttcacat 394
              ||||||||||||||||||||
Sbjct: 108157 atggctagtggggttcacat 108176
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>emb|AL596207.10| Mouse DNA sequence from clone RP23-336J1 on chromosome 11 Contains the
             5' end of the Sparc gene for secreted acidic cysteine rich
             glycoprotein, the Atox1 gene for ATX1 (antioxidant protein
             1) homolog 1 (yeast), an upregulated during skeletal
             muscle growth 5 (Usmg5) pseudogene, the gene for
             Ras-GTPase-activating protein SH3-domain binding protein
             (G3bp-pending) (C87777), a novel gene, the Glra1 gene for
             glycine receptor, alpha 1 subunit, a novel gene, a
             ubiquitously expressed transcript (Uxt) pseudogene and one
             CpG island, complete sequence
          Length = 204037

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   agtcaaattgaagtcaaatt 373
             ||||||||||||||||||||
Sbjct: 18085 agtcaaattgaagtcaaatt 18066
to top
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 602   cttcccttgctcctcgattctcagctgcagacttct 637
             |||||| |||||||| || |||||||||||| ||||
Sbjct: 58087 cttcccctgctcctctatcctcagctgcagatttct 58122
to top
>emb|AJ635272.1| Prunus avium partial S-RNase gene for ribonuclease S10, exons 2-3,
           isolate 9129-67 ('Napoleon' x Orleans 171), allele S10
          Length = 687

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 405 gcatggttagatcttcattc 424
           ||||||||||||||||||||
Sbjct: 305 gcatggttagatcttcattc 286
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>gb|AC091919.3| Homo sapiens chromosome 5 clone RP11-24M12, complete sequence
          Length = 166358

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 665   ctttttgaagttctaactgg 684
             ||||||||||||||||||||
Sbjct: 66033 ctttttgaagttctaactgg 66052
to top
>dbj|AK137125.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430091P20 product:unclassifiable, full insert
           sequence
          Length = 3087

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 375 atggctagtggggttcacat 394
           ||||||||||||||||||||
Sbjct: 391 atggctagtggggttcacat 410
to top
>dbj|AK149851.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530023D21 product:glycerol
           phosphate dehydrogenase 2, mitochondrial, full insert
           sequence
          Length = 1625

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 caaaacagtacatcagtgcg 190
           ||||||||||||||||||||
Sbjct: 433 caaaacagtacatcagtgcg 414
to top
>gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, complete sequence
          Length = 202651

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   atggctagtggggttcacat 394
             ||||||||||||||||||||
Sbjct: 35147 atggctagtggggttcacat 35128
to top
>dbj|AK032044.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330562D18 product:glycerol
           phosphate dehydrogenase 1, mitochondrial, full insert
           sequence
          Length = 2510

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 caaaacagtacatcagtgcg 190
           ||||||||||||||||||||
Sbjct: 412 caaaacagtacatcagtgcg 393
to top
>dbj|AK079336.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:9630028E19 product:inferred:
           glycerol phosphate dehydrogenase 1, mitochondrial, full
           insert sequence
          Length = 3008

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 caaaacagtacatcagtgcg 190
           ||||||||||||||||||||
Sbjct: 75  caaaacagtacatcagtgcg 56
to top
>dbj|AK034353.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330181J03 product:glycerol phosphate
            dehydrogenase 1, mitochondrial, full insert sequence
          Length = 3431

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  caaaacagtacatcagtgcg 190
            ||||||||||||||||||||
Sbjct: 2600 caaaacagtacatcagtgcg 2581
to top
>dbj|AK041972.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630049P17 product:unclassifiable, full
            insert sequence
          Length = 2509

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 375  atggctagtggggttcacat 394
            ||||||||||||||||||||
Sbjct: 1089 atggctagtggggttcacat 1108
to top
>dbj|AK011266.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2610001M21 product:glycerol
            phosphate dehydrogenase 1, mitochondrial, full insert
            sequence
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  caaaacagtacatcagtgcg 190
            ||||||||||||||||||||
Sbjct: 1122 caaaacagtacatcagtgcg 1103
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 602      cttcccttgctcctcgattctcagctgcagacttct 637
                |||||| |||||||| || |||||||||||| ||||
Sbjct: 34007191 cttcccctgctcctctatcctcagctgcagatttct 34007226
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 468      ttatttggaacatccttcac 487
                ||||||||||||||||||||
Sbjct: 27818813 ttatttggaacatccttcac 27818832
to top
>gb|AC009058.10| Homo sapiens chromosome 16 clone RP11-292B23, complete sequence
          Length = 164844

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   tggttagatcttcattcctt 427
             ||||||||||||||||||||
Sbjct: 15667 tggttagatcttcattcctt 15686
to top
>gb|AC005075.2|AC005075 Homo sapiens BAC clone CTA-219E16 from 7, complete sequence
          Length = 118334

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 458   attttgactgttatttggaa 477
             ||||||||||||||||||||
Sbjct: 94121 attttgactgttatttggaa 94140
to top
>gb|AC009024.6|AC009024 Homo sapiens chromosome 16 clone RP11-112G1, complete sequence
          Length = 158256

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    tggttagatcttcattcctt 427
              ||||||||||||||||||||
Sbjct: 121216 tggttagatcttcattcctt 121235
to top
>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0439B07
          Length = 89475

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   ttatttggaacatccttcac 487
             ||||||||||||||||||||
Sbjct: 73270 ttatttggaacatccttcac 73289
to top
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   ttatttggaacatccttcac 487
             ||||||||||||||||||||
Sbjct: 26891 ttatttggaacatccttcac 26910
to top
>dbj|AK104837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D12, full
           insert sequence
          Length = 1345

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 468 ttatttggaacatccttcac 487
           ||||||||||||||||||||
Sbjct: 447 ttatttggaacatccttcac 428
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>dbj|AK068463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153A10, full
            insert sequence
          Length = 2650

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 468  ttatttggaacatccttcac 487
            ||||||||||||||||||||
Sbjct: 1752 ttatttggaacatccttcac 1733
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>emb|CT025725.10| Mouse DNA sequence from clone RP23-477K5 on chromosome 17, complete
             sequence
          Length = 193217

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   tttctcccacagataaaaga 326
             ||||||||||||||||||||
Sbjct: 68942 tttctcccacagataaaaga 68923
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>emb|AL845166.8| Mouse DNA sequence from clone RP23-236H15 on chromosome 2, complete
             sequence
          Length = 104990

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   caaaacagtacatcagtgcg 190
             ||||||||||||||||||||
Sbjct: 90421 caaaacagtacatcagtgcg 90402


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,798,178
Number of Sequences: 3902068
Number of extensions: 5798178
Number of successful extensions: 103917
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103630
Number of HSP's gapped (non-prelim): 277
length of query: 718
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 695
effective length of database: 17,143,297,704
effective search space: 11914591904280
effective search space used: 11914591904280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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