ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd14g06 |
|---|---|
| Clone Library Name | barley_pub |
>THI42_MAIZE (Q41739) Thiazole biosynthetic enzyme 1-2, chloroplast precursor| Length = 354 Score = 141 bits (356), Expect(2) = 1e-67 Identities = 73/98 (74%), Positives = 82/98 (83%) Frame = -1 Query: 541 PG*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 362 PG + L AED IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA Sbjct: 258 PGMKALDMNAAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 317 Query: 361 LKALGRPNGIDGTLKNVTPALHPEMILAASNNADIVDA 248 LKALGRPN +DGT+ V+PAL E ++ AS + ++VDA Sbjct: 318 LKALGRPNAVDGTIPEVSPALREEFVI-ASKDDEVVDA 354 Score = 135 bits (340), Expect(2) = 1e-67 Identities = 64/65 (98%), Positives = 64/65 (98%) Frame = -3 Query: 710 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMK 531 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMI AVPGMK Sbjct: 202 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMK 261 Query: 530 ALDMN 516 ALDMN Sbjct: 262 ALDMN 266
>THI4_ALNGL (Q38709) Thiazole biosynthetic enzyme, chloroplast precursor (AG6)| Length = 352 Score = 138 bits (348), Expect(2) = 2e-64 Identities = 72/98 (73%), Positives = 82/98 (83%) Frame = -1 Query: 541 PG*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 362 PG + L AEDAIVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA Sbjct: 258 PGMKALDMNVAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 317 Query: 361 LKALGRPNGIDGTLKNVTPALHPEMILAASNNADIVDA 248 LKALG PN +DG + +HPE+ILAA+++A+I DA Sbjct: 318 LKALGLPNALDG---SYVGGIHPELILAAADSAEIADA 352 Score = 127 bits (320), Expect(2) = 2e-64 Identities = 60/65 (92%), Positives = 61/65 (93%) Frame = -3 Query: 710 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMK 531 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK L+ IGMI VPGMK Sbjct: 202 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMK 261 Query: 530 ALDMN 516 ALDMN Sbjct: 262 ALDMN 266
>THI4_FUSSH (P23617) Thiazole biosynthetic enzyme, mitochondrial precursor| (Stress-inducible protein sti35) Length = 324 Score = 88.6 bits (218), Expect(2) = 6e-35 Identities = 40/66 (60%), Positives = 50/66 (75%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGM 534 +GVVTNW LVSM+HD QSCMDPN + A +V+S+ GHD P GA VKRL +G I+ + GM Sbjct: 195 SGVVTNWTLVSMHHDDQSCMDPNTINAPLVISTTGHDAPMGAFCVKRLVSMGRIEKLGGM 254 Query: 533 KALDMN 516 + LDMN Sbjct: 255 RGLDMN 260 Score = 79.3 bits (194), Expect(2) = 6e-35 Identities = 41/63 (65%), Positives = 50/63 (79%) Frame = -1 Query: 538 G*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLAL 359 G R L AEDAIV+ TRE+VPG+IV GME++E+DGA RMGPTFGAM++SG KAA AL Sbjct: 253 GMRGLDMNVAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEAL 312 Query: 358 KAL 350 K + Sbjct: 313 KVI 315
>THI4_FUSOX (P23618) Thiazole biosynthetic enzyme, mitochondrial precursor| (Stress-inducible protein sti35) Length = 320 Score = 88.6 bits (218), Expect(2) = 1e-34 Identities = 40/66 (60%), Positives = 50/66 (75%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGM 534 AGVVTNW LVSM+HD QSCMDPN + A +++S+ GHDGP GA VKRL + I+ + GM Sbjct: 191 AGVVTNWTLVSMHHDDQSCMDPNTINAPLIISTTGHDGPMGAFCVKRLVSMQRIEKLGGM 250 Query: 533 KALDMN 516 + LDMN Sbjct: 251 RGLDMN 256 Score = 78.2 bits (191), Expect(2) = 1e-34 Identities = 41/61 (67%), Positives = 48/61 (78%) Frame = -1 Query: 538 G*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLAL 359 G R L AEDAIV+ TRE+VPG+IV GME++E+DGA RMGPTFGAM +SG KAA AL Sbjct: 249 GMRGLDMNLAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEAL 308 Query: 358 K 356 K Sbjct: 309 K 309
>THI2_SCHPO (P40998) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 328 Score = 85.9 bits (211), Expect(2) = 1e-32 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGM 534 AGVVTNW LVS+NH QSCMDPN + A +VVS+ GHDGPFGA VKRL ++ + M Sbjct: 197 AGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDM 256 Query: 533 KALDMN 516 + LDMN Sbjct: 257 RPLDMN 262 Score = 74.3 bits (181), Expect(2) = 1e-32 Identities = 40/58 (68%), Positives = 43/58 (74%) Frame = -1 Query: 532 RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLAL 359 R L RAED IV+ TREV PGMIV GME++E DGA RMGPTFG MM SG KAA AL Sbjct: 257 RPLDMNRAEDLIVKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEAL 314
>THI4_CITSI (O23787) Thiazole biosynthetic enzyme, chloroplast precursor| Length = 356 Score = 139 bits (349), Expect = 1e-32 Identities = 72/98 (73%), Positives = 82/98 (83%) Frame = -1 Query: 541 PG*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 362 PG + L AEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA Sbjct: 262 PGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 321 Query: 361 LKALGRPNGIDGTLKNVTPALHPEMILAASNNADIVDA 248 LK+LG+PN +DGT +HPE+ILAA+++A+ DA Sbjct: 322 LKSLGQPNALDGT---YVGGVHPELILAAADSAETADA 356 Score = 130 bits (328), Expect = 3e-30 Identities = 61/66 (92%), Positives = 64/66 (96%) Frame = -3 Query: 710 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMK 531 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRL+ IGMI+ VPGMK Sbjct: 206 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMK 265 Query: 530 ALDMNT 513 ALDMN+ Sbjct: 266 ALDMNS 271
>THI4_ASPOR (Q9UUZ9) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 327 Score = 86.7 bits (213), Expect(2) = 1e-32 Identities = 37/67 (55%), Positives = 49/67 (73%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGM 534 AGVV NW LV+++HD SCMDPN + A V++S+ GHDGPFGA KRL +G + + GM Sbjct: 198 AGVVVNWTLVTLHHDDHSCMDPNTINAPVIISTTGHDGPFGAFCAKRLVSMGSVDKLGGM 257 Query: 533 KALDMNT 513 + LDMN+ Sbjct: 258 RGLDMNS 264 Score = 73.2 bits (178), Expect(2) = 1e-32 Identities = 39/61 (63%), Positives = 46/61 (75%) Frame = -1 Query: 538 G*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLAL 359 G R L AEDAIV+ TREV G+I+ GME++EIDG RMGPTFGAM++SG KAA AL Sbjct: 256 GMRGLDMNSAEDAIVKNTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSGVKAAEEAL 315 Query: 358 K 356 K Sbjct: 316 K 316
>THI41_MAIZE (Q41738) Thiazole biosynthetic enzyme 1-1, chloroplast precursor| Length = 354 Score = 137 bits (345), Expect = 3e-32 Identities = 65/66 (98%), Positives = 65/66 (98%) Frame = -3 Query: 710 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMK 531 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMI AVPGMK Sbjct: 205 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMK 264 Query: 530 ALDMNT 513 ALDMNT Sbjct: 265 ALDMNT 270 Score = 132 bits (331), Expect = 1e-30 Identities = 70/98 (71%), Positives = 81/98 (82%) Frame = -1 Query: 541 PG*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 362 PG + L AED IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA Sbjct: 261 PGMKALDMNTAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 320 Query: 361 LKALGRPNGIDGTLKNVTPALHPEMILAASNNADIVDA 248 LKALGRPN +DGT+ +P L E+++A ++ ++VDA Sbjct: 321 LKALGRPNAVDGTM---SPPLREELMIAYKDD-EVVDA 354
>THI4_UROFA (Q9UVF8) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 338 Score = 80.5 bits (197), Expect(2) = 5e-32 Identities = 37/65 (56%), Positives = 46/65 (70%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGM 534 AG VTNW LVS+NHD QSCMDP+ + A +V S GHDGPFGA VKR+ G+ + + M Sbjct: 203 AGCVTNWTLVSLNHDHQSCMDPSTITAPLVCSFAGHDGPFGAFCVKRVASAGLSEGLGDM 262 Query: 533 KALDM 519 + LDM Sbjct: 263 RPLDM 267 Score = 77.4 bits (189), Expect(2) = 5e-32 Identities = 37/63 (58%), Positives = 50/63 (79%) Frame = -1 Query: 532 RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKA 353 R L RAED I TRE++PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL++ Sbjct: 263 RPLDMERAEDHIANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQS 322 Query: 352 LGR 344 L R Sbjct: 323 LDR 325
>THI4_ARATH (Q38814) Thiazole biosynthetic enzyme, chloroplast precursor (ARA6)| Length = 349 Score = 135 bits (339), Expect = 2e-31 Identities = 73/98 (74%), Positives = 80/98 (81%) Frame = -1 Query: 541 PG*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 362 PG + L AEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA LA Sbjct: 255 PGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLA 314 Query: 361 LKALGRPNGIDGTLKNVTPALHPEMILAASNNADIVDA 248 LKALG PN IDGTL L PE++LAA+++A+ VDA Sbjct: 315 LKALGLPNAIDGTL---VGNLSPELVLAAADSAETVDA 349 Score = 125 bits (313), Expect = 2e-28 Identities = 58/66 (87%), Positives = 61/66 (92%) Frame = -3 Query: 710 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMK 531 GVVTNWALV+ NH TQSCMDPNVMEAK+VVSSCGHDGPFGATGVKRL+ IGMI VPGMK Sbjct: 199 GVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMK 258 Query: 530 ALDMNT 513 ALDMNT Sbjct: 259 ALDMNT 264
>THI4_YEAST (P32318) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 326 Score = 77.8 bits (190), Expect(2) = 6e-23 Identities = 41/81 (50%), Positives = 48/81 (59%), Gaps = 15/81 (18%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAK---------------VVVSSCGHDGPFGATGV 579 AGVVTNW LV+ H TQ CMDPNV+E V++S+ GHDGPFGA Sbjct: 187 AGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCA 246 Query: 578 KRLQDIGMIQAVPGMKALDMN 516 KR+ DI Q + GMK LDMN Sbjct: 247 KRIVDIDQNQKLGGMKGLDMN 267 Score = 49.7 bits (117), Expect(2) = 6e-23 Identities = 25/40 (62%), Positives = 27/40 (67%) Frame = -1 Query: 475 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 356 V M GMEVAE+DG RMGPTFGAM +SG AA LK Sbjct: 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILK 322
>THI4_AERPE (Q9Y9Z0) Putative thiazole biosynthetic enzyme| Length = 274 Score = 70.1 bits (170), Expect(2) = 3e-17 Identities = 33/56 (58%), Positives = 43/56 (76%) Frame = -1 Query: 514 RAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 347 R+ED +V T EV PG++V G+ VAE+ G PRMGPTFGAM++SG+KAA L + LG Sbjct: 206 RSEDLVVEKTGEVYPGLVVAGIAVAEVYGLPRMGPTFGAMLLSGEKAAALIGEKLG 261 Score = 38.1 bits (87), Expect(2) = 3e-17 Identities = 21/56 (37%), Positives = 32/56 (57%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQA 546 AGVV NW+ V +C+DP + A+ VV + GHD A ++L + GM++A Sbjct: 145 AGVVVNWSPVQGLPRQITCVDPVGLRAEYVVDATGHD----AVVTRKLAERGMVEA 196
>THI4_PYRKO (Q5JD25) Putative thiazole biosynthetic enzyme| Length = 251 Score = 60.5 bits (145), Expect(2) = 2e-14 Identities = 29/57 (50%), Positives = 38/57 (66%) Frame = -1 Query: 514 RAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 344 + E+ V TREV PG+ TGM + GAPRMGP FG M++SG+KAA L+ LG+ Sbjct: 195 KGEELTVEHTREVFPGLYATGMAANALAGAPRMGPIFGGMLLSGRKAALEILQKLGK 251 Score = 38.1 bits (87), Expect(2) = 2e-14 Identities = 25/59 (42%), Positives = 33/59 (55%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPG 537 +G+V NW V M T +DP +EAK VV S GH GA + L G+I+A+PG Sbjct: 136 SGLVINWTPVMM---TGLHVDPLTVEAKFVVDSTGH----GAQISQHLLKRGLIKAIPG 187
>THI4_PYRFU (Q8U0Q5) Putative thiazole biosynthetic enzyme| Length = 252 Score = 58.9 bits (141), Expect(2) = 6e-14 Identities = 29/54 (53%), Positives = 35/54 (64%) Frame = -1 Query: 508 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 347 E V T+EV PG+ VTGM + GAPRMGP FG M +SG+KAA L+ LG Sbjct: 198 EKLTVENTKEVFPGLYVTGMAANAVSGAPRMGPIFGGMFLSGRKAAMEILQKLG 251 Score = 38.1 bits (87), Expect(2) = 6e-14 Identities = 24/63 (38%), Positives = 34/63 (53%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGM 534 +G+V NW V M T +DP +EAK V+ S GH GA + L G+I+ +PG Sbjct: 137 SGIVINWTPVKM---TGLHVDPLTVEAKYVIDSTGH----GAQVTQFLLKRGLIEKIPGE 189 Query: 533 KAL 525 A+ Sbjct: 190 GAM 192
>THI4_PYRHO (O59082) Putative thiazole biosynthetic enzyme| Length = 255 Score = 61.2 bits (147), Expect(2) = 1e-13 Identities = 33/64 (51%), Positives = 39/64 (60%) Frame = -1 Query: 541 PG*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 362 PG + + E V+ TREV PG+ VTGM I GAPRMGP FG M +SG+KAA Sbjct: 190 PGEGAMWAEQGEKLTVKNTREVFPGLYVTGMAANAIAGAPRMGPIFGGMFLSGRKAAQEI 249 Query: 361 LKAL 350 LK L Sbjct: 250 LKKL 253 Score = 35.0 bits (79), Expect(2) = 1e-13 Identities = 22/63 (34%), Positives = 32/63 (50%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGM 534 +G+V NW V M +DP +EAK V+ S GH VKR G+++ +PG Sbjct: 140 SGIVINWTPVLM---AGLHVDPLTIEAKYVIDSTGHGAQVAQFLVKR----GLLKEIPGE 192 Query: 533 KAL 525 A+ Sbjct: 193 GAM 195
>THI4_PYRAB (Q9V0J8) Putative thiazole biosynthetic enzyme| Length = 252 Score = 58.5 bits (140), Expect(2) = 1e-13 Identities = 32/64 (50%), Positives = 38/64 (59%) Frame = -1 Query: 541 PG*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 362 PG + + E V TREV PG+ VTGM I GAPRMGP FG M +SG+KAA Sbjct: 187 PGEGAMWAEQGERLTVENTREVFPGLYVTGMAANAIAGAPRMGPIFGGMFLSGKKAAQEI 246 Query: 361 LKAL 350 L+ L Sbjct: 247 LEKL 250 Score = 37.4 bits (85), Expect(2) = 1e-13 Identities = 24/63 (38%), Positives = 34/63 (53%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGM 534 +G+V NW V M T +DP +EAK V+ S GH GA + L G+I+ +PG Sbjct: 137 SGIVINWTPVLM---TGLHVDPLTVEAKYVIDSTGH----GAQVAQFLLKRGLIERIPGE 189 Query: 533 KAL 525 A+ Sbjct: 190 GAM 192
>THI4_HALSA (Q9HMC7) Putative thiazole biosynthetic enzyme| Length = 310 Score = 51.6 bits (122), Expect(2) = 2e-12 Identities = 23/54 (42%), Positives = 35/54 (64%) Frame = -1 Query: 511 AEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 350 +ED +V T +V G++ G+ A + G RMGPTFGAM++SG+ AA+ + L Sbjct: 237 SEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAANAVMDEL 290 Score = 40.4 bits (93), Expect(2) = 2e-12 Identities = 22/56 (39%), Positives = 31/56 (55%) Frame = -3 Query: 713 AGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQA 546 AG V NW V +C+DP +EA VVV + GHD A V +L + G+++A Sbjct: 147 AGAVVNWTPVHSLPRELTCVDPIALEADVVVDATGHD----AVVVSKLHERGVLEA 198
>THI4_METMA (Q8Q0B5) Putative thiazole biosynthetic enzyme| Length = 260 Score = 56.2 bits (134), Expect(2) = 9e-10 Identities = 28/53 (52%), Positives = 34/53 (64%) Frame = -1 Query: 508 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 350 E V T+E+ PG+IV GM APRMGP FG M++SG+KAA LAL L Sbjct: 205 ERLAVDATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257 Score = 26.6 bits (57), Expect(2) = 9e-10 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -3 Query: 710 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 603 G+V NW V+ + +DP ++ K+V+ GHD Sbjct: 140 GIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHD 172
>THI4_METAC (Q8TM19) Putative thiazole biosynthetic enzyme| Length = 260 Score = 57.0 bits (136), Expect(2) = 2e-09 Identities = 28/53 (52%), Positives = 34/53 (64%) Frame = -1 Query: 508 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 350 E V T+E+ PG+IV GM APRMGP FG M++SG+KAA LAL L Sbjct: 205 ERLAVNATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257 Score = 25.0 bits (53), Expect(2) = 2e-09 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -3 Query: 710 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 603 G+V NW V+ + +DP ++ K+V+ GH+ Sbjct: 140 GIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHE 172
>THI4_METTH (O27657) Putative thiazole biosynthetic enzyme| Length = 266 Score = 54.3 bits (129), Expect(2) = 2e-09 Identities = 24/53 (45%), Positives = 35/53 (66%) Frame = -1 Query: 508 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 350 E A++ TREV P + V GM + GAPRMGP FG M++SG++ A + ++ L Sbjct: 213 EAALIENTREVYPNLYVAGMASNAVYGAPRMGPIFGGMLVSGRRVAEMIIEKL 265 Score = 27.3 bits (59), Expect(2) = 2e-09 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -3 Query: 710 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 603 G+V NW+ V M +DP + A+ V+ + GHD Sbjct: 147 GLVLNWSSVEM---AGLHVDPLTVRARAVIDATGHD 179
>THI4_METMP (Q6LXJ8) Putative thiazole biosynthetic enzyme| Length = 262 Score = 50.1 bits (118), Expect(2) = 3e-09 Identities = 26/64 (40%), Positives = 36/64 (56%) Frame = -1 Query: 541 PG*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 362 PG + + + E+++ R TREV PG+ V GM RMG FG M +SG+K A L Sbjct: 196 PGEKSMWADKGENSLTRNTREVFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAELI 255 Query: 361 LKAL 350 L+ L Sbjct: 256 LEKL 259 Score = 31.2 bits (69), Expect(2) = 3e-09 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = -3 Query: 656 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 525 +DP + AK V+ S GHD T ++ +D+G+ VPG K++ Sbjct: 160 IDPITISAKYVIDSTGHDASVINTLARKNKDLGI--EVPGEKSM 201
>THI4_THEMA (Q9WZP4) Putative thiazole biosynthetic enzyme| Length = 250 Score = 57.8 bits (138), Expect = 3e-08 Identities = 26/54 (48%), Positives = 36/54 (66%) Frame = -1 Query: 511 AEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 350 AE +V T E+ PG++V+GM V + G PRMGP FG M++SGQK A + + L Sbjct: 196 AEKFVVDNTGEIFPGLLVSGMAVCAVHGGPRMGPIFGGMILSGQKVARIVSERL 249
>THI4_ARCFU (O29556) Putative thiazole biosynthetic enzyme| Length = 260 Score = 51.2 bits (121), Expect(2) = 3e-07 Identities = 24/54 (44%), Positives = 33/54 (61%) Frame = -1 Query: 511 AEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 350 AE IV T ++V G+ GM VA + PRMGP FG M++SG+K A + + L Sbjct: 205 AEREIVEKTGKIVKGLYAAGMAVAAVHNLPRMGPIFGGMLLSGKKVAEIVAEDL 258 Score = 23.1 bits (48), Expect(2) = 3e-07 Identities = 11/47 (23%), Positives = 23/47 (48%) Frame = -3 Query: 710 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRL 570 GV W+ V ++ +DP + ++ VV + GHD + +++ Sbjct: 145 GVCIQWSAVEISG---LHVDPLFLRSRAVVDATGHDAEVISVAARKI 188
>THI4_POPEU (P84548) Thiazole biosynthetic enzyme (Fragments)| Length = 48 Score = 53.5 bits (127), Expect = 6e-07 Identities = 26/31 (83%), Positives = 28/31 (90%) Frame = -1 Query: 511 AEDAIVRLTREVVPGMIVTGMEVAEIDGAPR 419 AED IV+ RE+VPGMIVTGMEVAEIDGAPR Sbjct: 18 AEDLIVKGGREIVPGMIVTGMEVAEIDGAPR 48
>THI4_METJA (Q58018) Putative thiazole biosynthetic enzyme| Length = 263 Score = 47.0 bits (110), Expect(2) = 4e-06 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = -1 Query: 541 PG*RRLT*TRAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 362 PG + + + E+A++R TREV P + V GM G RMG FG M +SG+ A L Sbjct: 196 PGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYRMGAIFGGMYLSGKLCAELI 255 Query: 361 LKAL 350 + L Sbjct: 256 TEKL 259 Score = 23.5 bits (49), Expect(2) = 4e-06 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -3 Query: 656 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 525 +DP + +KVVV + GH+ VK+ + + VPG K++ Sbjct: 161 IDPLTIRSKVVVDATGHEASIVNILVKKNK---LEADVPGEKSM 201
>RPOB_LEPBI (Q9KK59) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1228 Score = 35.0 bits (79), Expect = 0.23 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 508 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 332 E ++R+ EV PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 878 ESGVIRVGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKEVRDSSLRMPNGF 935 Query: 331 DGTLKNV 311 +GT+ ++ Sbjct: 936 EGTVIDI 942
>RPOB_LEPIN (Q8F0S2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1226 Score = 34.7 bits (78), Expect = 0.30 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 508 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 332 E ++R+ EV PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 876 ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933 Query: 331 DGTLKNV 311 +GT+ ++ Sbjct: 934 EGTVIDI 940
>RPOB_LEPIC (Q72UA8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1226 Score = 34.7 bits (78), Expect = 0.30 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 508 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 332 E ++R+ EV PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 876 ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933 Query: 331 DGTLKNV 311 +GT+ ++ Sbjct: 934 EGTVIDI 940
>GSCL_HUMAN (O15499) Homeobox protein goosecoid-like (GSC-2)| Length = 205 Score = 31.6 bits (70), Expect = 2.5 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +3 Query: 336 PFGRPRA---LSARCAAFWPEIIMAPKVGPILGAPSISATSMPVTIMPGTTSRVRR 494 P G P A L AR A WP + + P V LGAP+ + ++P + PG+ R RR Sbjct: 76 PCGPPEAAAGLGARLA--WP-LRLGPAVPLSLGAPAGGSGALPGAVGPGSQRRTRR 128
>Y179_TREPA (O83209) Hypothetical protein TP0179| Length = 627 Score = 31.2 bits (69), Expect = 3.3 Identities = 37/130 (28%), Positives = 50/130 (38%), Gaps = 19/130 (14%) Frame = +2 Query: 224 PQTPARCLXXXXXXXXXRRQDHLRVQRRGNVLERPV---DAVRPAEGLERQVRRLLAGDH 394 P PARC HLR R+ VL R V D R A L R + Sbjct: 8 PSAPARCR-------------HLR--RKNGVLLRIVEKTDRTRYAHALRHGCRHRMCEGV 52 Query: 395 HGAEGRAHSRGTVDLGDLHA-------GDNHARD------DLAGEAHDGVL---GPCSCQ 526 HG E A + ++ HA G++ A D + EA + + GP + Sbjct: 53 HGTEEDAMGSESAEMDSPHATARPQEQGEDRAWDACGVWVKVPPEAQEPPVSSGGPEDPE 112 Query: 527 APSSRAPPGS 556 AP+ APPG+ Sbjct: 113 APAQHAPPGA 122
>MLF_DROME (Q9NKV0) Myeloid leukemia factor (Myelodysplasia-myeloid leukemia| factor) (dMLF) Length = 309 Score = 30.4 bits (67), Expect = 5.6 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 16/99 (16%) Frame = +3 Query: 324 VPSMP----FGRP------RALSARC-----AAFWPEIIMAPKVGPILGAPSISATSMPV 458 +P+MP FG P R L+A A+F +M GP G P I S Sbjct: 69 MPAMPAMGLFGMPMMPNFNRLLNADIGGNSGASFCQSTVMTMSSGPD-GRPQIYQASTST 127 Query: 459 TIMPGTTSRVRRTMASSARVHVKRLHPGHRL-DHADVLE 572 PG RRT+ S R VK++ GH + + A ++E Sbjct: 128 KTGPGGVRETRRTVQDS-RTGVKKMAIGHHIGERAHIIE 165
>ARNB_PSEU2 (Q4ZSZ4) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate| aminotransferase (EC 2.6.1.-) (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase) (UDP-Ara4O aminotransferase) (Polymyxin resistance protein pmrH) Length = 382 Score = 30.4 bits (67), Expect = 5.6 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = -1 Query: 508 EDAIVRLTREVVPGMIVTGMEVAEIDG--APRMGPTFGAMMISGQKAAHLALKALG 347 ++ I +TR + G I TG E +++ A R+G + S A H+AL ALG Sbjct: 15 DEEIAAVTRVLRSGWITTGPECQKLEEEFAARVGARHAVALSSATGAMHVALLALG 70
>RPOB_BORGA (Q661M9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1155 Score = 30.0 bits (66), Expect = 7.3 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 508 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 332 E+ I+R+ V PG I+ G + +G + P F + I G+KA + +L P+G Sbjct: 816 ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873 Query: 331 DGTLKNV 311 +GT+ +V Sbjct: 874 EGTVIDV 880
>RPOB_BORBU (Q59191) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1155 Score = 30.0 bits (66), Expect = 7.3 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 508 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 332 E+ I+R+ V PG I+ G + +G + P F + I G+KA + +L P+G Sbjct: 816 ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873 Query: 331 DGTLKNV 311 +GT+ +V Sbjct: 874 EGTVIDV 880
>RPOBC_HELHP (Q7VJ82) Bifunctional DNA-directed RNA polymerase, beta and beta'| chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-directed RNA polymerase beta' chain (Transcri Length = 2894 Score = 30.0 bits (66), Expect = 7.3 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Frame = -1 Query: 508 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM---ISGQKAAHLALKALGRPN 338 E IVR+ V GMI+ G ++ + PT + I G+KA H+ K+L P Sbjct: 878 ESGIVRIGTYVSAGMILVG----KVSPKGEVKPTPEERLLRAIFGEKAGHVVNKSLYCPP 933 Query: 337 GIDGTLKNV 311 ++GT+ +V Sbjct: 934 SLEGTVVDV 942
>PRIM_SYNP7 (P74893) DNA primase (EC 2.7.7.-)| Length = 694 Score = 29.6 bits (65), Expect = 9.6 Identities = 13/20 (65%), Positives = 13/20 (65%) Frame = -1 Query: 310 TPALHPEMILAASNNADIVD 251 TP LHPE I A ADIVD Sbjct: 3 TPRLHPETIAAVKERADIVD 22 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,822,782 Number of Sequences: 219361 Number of extensions: 1561342 Number of successful extensions: 5326 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 5070 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5311 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7252940416 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
