>YKD1_CAEEL (Q03560) Hypothetical protein B0464.2 in chromosome III|
          Length = 1150

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -1

Query: 336  IKDPAQLVVSHAKSSKDVLKHPEEVED-RTGGGNKKLR 226
            ++D   L +S  + +KDVL+ PE VE+ R GGG +K R
Sbjct: 908  LEDMKNLRLSFIEMTKDVLRLPEIVEEKRRGGGGRKRR 945

>PTN6_RAT (P81718) Tyrosine-protein phosphatase non-receptor type 6 (EC|
           3.1.3.48) (Protein-tyrosine phosphatase SHP-1)
          Length = 613

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = -1

Query: 387 EIEQKSRDGNMECTFPAIKDPAQLVVSHAKSSKDVLKHPEEVEDRTGGGNKK 232
           EI Q  R    E  +  I  P  L  +HAK+S+   KH EEV +     NKK
Sbjct: 526 EIIQSQR--GQESEYGNITYPPALRSAHAKASRTSSKHKEEVYENVHSKNKK 575

>LGT_BIFLO (Q8G692) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 315

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 134 GPFAVHLYFRTILLCTCWALNLYV*RSRWMMYCNSCDVLLN 12
           GPF +H+Y   IL+  C A  +++  +RW  Y  + D +L+
Sbjct: 17  GPFTIHMYAICILIGICVA--VWILATRWKRYGGTFDQILD 55

>SAHH3_PONPY (Q5R889) Putative adenosylhomocysteinase 3 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 3) (AdoHcyase 3)
          Length = 508

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 162 MLMCGYALVGPFCCAPVL*NYFVVYLLGLESLCVEESMDD 43
           +++CGY  VG  CCA +     +VY+  ++ +C  ++  D
Sbjct: 292 VVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMD 331

>SAHH2_MOUSE (Q80SW1) Putative adenosylhomocysteinase 2 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 2) (AdoHcyase 2)
           (S-adenosylhomocysteine hydrolase-like 1) (IP3R-binding
           protein released with inositol 1,4,5-trisphosphate)
          Length = 530

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 162 MLMCGYALVGPFCCAPVL*NYFVVYLLGLESLCVEESMDD 43
           +++CGY  VG  CCA +     +VY+  ++ +C  ++  D
Sbjct: 314 VVVCGYGEVGKGCCAALKALGAIVYITEIDPICALQACMD 353

>SAHH2_HUMAN (O43865) Putative adenosylhomocysteinase 2 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 2) (AdoHcyase 2)
           (S-adenosylhomocysteine hydrolase-like 1) (DC-expressed
           AHCY-like molecule)
          Length = 530

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 162 MLMCGYALVGPFCCAPVL*NYFVVYLLGLESLCVEESMDD 43
           +++CGY  VG  CCA +     +VY+  ++ +C  ++  D
Sbjct: 314 VVVCGYGEVGKGCCAALKALGAIVYITEIDPICALQACMD 353

>SAHH3_MOUSE (Q68FL4) Putative adenosylhomocysteinase 3 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 3) (AdoHcyase 3)
          Length = 613

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 162 MLMCGYALVGPFCCAPVL*NYFVVYLLGLESLCVEESMDD 43
           +++CGY  VG  CCA +     +VY+  ++ +C  ++  D
Sbjct: 397 VVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMD 436

>SAHH3_HUMAN (Q96HN2) Putative adenosylhomocysteinase 3 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 3) (AdoHcyase 3)
          Length = 611

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 162 MLMCGYALVGPFCCAPVL*NYFVVYLLGLESLCVEESMDD 43
           +++CGY  VG  CCA +     +VY+  ++ +C  ++  D
Sbjct: 395 VVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMD 434

>GPMA2_BACTN (Q8A765) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase|
           2 (EC 5.4.2.1) (Phosphoglyceromutase 2) (PGAM 2)
           (BPG-dependent PGAM 2) (dPGM 2)
          Length = 248

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 345 FPAIKDP-AQLVVSHAKSSKDVLKHPEEVED 256
           FPA+KD    LVV+H  S + ++KH + + D
Sbjct: 168 FPALKDAHTLLVVAHGNSLRGIIKHLKHISD 198

>ISPG_CLOAB (Q97I56) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 349

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = -1

Query: 393 GDEIEQKSRDGNMECTFPAIKDPAQLVV--SHAKSSKDVLKHPEEVEDRTGGGNKKLRLS 220
           GD +E+      +  TF  +K   + +   +  ++S D++K   EVE R    NK ++++
Sbjct: 236 GDPVEEVKVGREILKTFGYLKSGVEFISCPTCGRTSIDLIKIANEVEKRLEKTNKSIKVA 295

Query: 219 LMLYVIN 199
           +M  V+N
Sbjct: 296 VMGCVVN 302


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,555,688
Number of Sequences: 219361
Number of extensions: 1341630
Number of successful extensions: 2964
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2964
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)