>gb|AY033628.1| Hordeum vulgare subsp. vulgare horcolin mRNA, complete cds
          Length = 665

 Score = 1178 bits (594), Expect = 0.0
 Identities = 603/606 (99%)
 Strand = Plus / Minus

                                                                       
Query: 126 gcagcgtcacacataatcacacacatatgctaaagtgccatgtaaggcacttcacaagtt 185
           |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gcagcgtcacacattatcccacacatatgctaaagtgccatgtaaggcacttcacaagtt 606

                                                                       
Query: 186 tatttattctagcaagcagacgctgccggtagtactacgccacctccttcctccagagga 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tatttattctagcaagcagacgctgccggtagtactacgccacctccttcctccagagga 546

                                                                       
Query: 246 gaagtggccggccgatatcaaccaaccattcatggagtaatgtagaacccaatcgcgtcc 305
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gaggtggccggccgatatcaaccaaccattcatggagtaatgtagaacccaatcgcgtcc 486

                                                                       
Query: 306 aggaaagcaccagcccgtccaaagaagccggcgatcttacccccgtcaagcaccgggacg 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aggaaagcaccagcccgtccaaagaagccggcgatcttacccccgtcaagcaccgggacg 426

                                                                       
Query: 366 cggaatggaattccggtacctgagccgtatgtcctggtaacccccttggaggtgataatt 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cggaatggaattccggtacctgagccgtatgtcctggtaacccccttggaggtgataatt 366

                                                                       
Query: 426 ttaagagacgtgacgatgtcgtcggtcccaaatttacccactgtcccggagatttcggtc 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttaagagacgtgacgatgtcgtcggtcccaaatttacccactgtcccggagatttcggtc 306

                                                                       
Query: 486 acgtagttcgtagcgtctagattaatcgtatcttctgtgccgccagtgccaccccacttg 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 acgtagttcgtagcgtctagattaatcgtatcttctgtgccgccagtgccaccccacttg 246

                                                                       
Query: 546 atgccggaagagtgttgaacgttatcggtgcccacataggtgaatgcaatagcgtcaacg 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atgccggaagagtgttgaacgttatcggtgcccacataggtgaatgcaatagcgtcaacg 186

                                                                       
Query: 606 atagctccgctactgacggtcatactaaccatacggatgggctttggctggacatcacgc 665
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atagctccgctactgacggtcatactaaccatacggatgggctttggctggacatcacgc 126

                                                                       
Query: 666 tcgctgccaccattcccaccccatggcccaatcttcacaggcttgctcattttggctcct 725
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tcgctgccaccattcccaccccatggcccaatcttcacaggcttgctcattttggctcct 66

                 
Query: 726 gcttta 731
           ||||||
Sbjct: 65  gcttta 60

>gb|AY770690.1| Hordeum vulgare horcolin gene, complete cds
          Length = 1338

 Score =  735 bits (371), Expect = 0.0
 Identities = 383/387 (98%)
 Strand = Plus / Minus

                                                                        
Query: 126  gcagcgtcacacataatcacacacatatgctaaagtgccatgtaaggcacttcacaagtt 185
            |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 gcagcgtcacacattatcccacacatatgctaaagtgccatgtaaggcacttcacaagtt 1279

                                                                        
Query: 186  tatttattctagcaagcagacgctgccggtagtactacgccacctccttcctccagagga 245
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1278 tatttattctagcaagcagacgctgccggtagtactacgccacctccttcttccagagga 1219

                                                                        
Query: 246  gaagtggccggccgatatcaaccaaccattcatggagtaatgtagaacccaatcgcgtcc 305
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1218 gaggtggccggccgatatcaaccaaccattcatggagtaatgtagaacccaatcgcgtcc 1159

                                                                        
Query: 306  aggaaagcaccagcccgtccaaagaagccggcgatcttacccccgtcaagcaccgggacg 365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1158 aggaaagcaccagcccgtccaaagaagccggcgatcttacccccgtcaagcaccgggacg 1099

                                                                        
Query: 366  cggaatggaattccggtacctgagccgtatgtcctggtaacccccttggaggtgataatt 425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1098 cggaatggaattccggtacctgagccgtatgtcctggtaacccccttggaggtgataatt 1039

                                                                        
Query: 426  ttaagagacgtgacgatgtcgtcggtcccaaatttacccactgtcccggagatttcggtc 485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 ttaagagacgtgacgatgtcgtcggtcccaaatttacccactgtcccggagatttcggtc 979

                                       
Query: 486  acgtagttcgtagcgtctagattaatc 512
            |||||||||||||||||||||||||||
Sbjct: 978  acgtagttcgtagcgtctagattaatc 952



 Score =  400 bits (202), Expect = e-108
 Identities = 202/202 (100%)
 Strand = Plus / Minus

                                                                       
Query: 512 cgtatcttctgtgccgccagtgccaccccacttgatgccggaagagtgttgaacgttatc 571
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 cgtatcttctgtgccgccagtgccaccccacttgatgccggaagagtgttgaacgttatc 725

                                                                       
Query: 572 ggtgcccacataggtgaatgcaatagcgtcaacgatagctccgctactgacggtcatact 631
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ggtgcccacataggtgaatgcaatagcgtcaacgatagctccgctactgacggtcatact 665

                                                                       
Query: 632 aaccatacggatgggctttggctggacatcacgctcgctgccaccattcccaccccatgg 691
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aaccatacggatgggctttggctggacatcacgctcgctgccaccattcccaccccatgg 605

                                 
Query: 692 cccaatcttcacaggcttgctc 713
           ||||||||||||||||||||||
Sbjct: 604 cccaatcttcacaggcttgctc 583

>gb|DQ016627.1| Agrostis stolonifera Crs-1 mRNA, complete cds
          Length = 1283

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 675 ccattcccaccccatggcccaa 696
           ||||||||||||||||||||||
Sbjct: 599 ccattcccaccccatggcccaa 578

>gb|AC107702.12| Mus musculus chromosome 3, clone RP23-391G19, complete sequence
          Length = 219296

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 234    tcctccagaggagaagtggcc 254
              |||||||||||||||||||||
Sbjct: 156180 tcctccagaggagaagtggcc 156200

>gb|AC013604.9|AC013604 Homo sapiens, clone RP11-10E14, complete sequence
          Length = 167236

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   acacataatcacacacatatg 154
             |||||||||||||||||||||
Sbjct: 70663 acacataatcacacacatatg 70683

>emb|BX001055.11| Zebrafish DNA sequence from clone CH211-87M5 in linkage group 9, complete
              sequence
          Length = 194418

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 133    cacacataatcacacacatat 153
              |||||||||||||||||||||
Sbjct: 182036 cacacataatcacacacatat 182016

>gb|AC127305.5| Mus musculus BAC clone RP23-289H23 from 3, complete sequence
          Length = 211760

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 234    tcctccagaggagaagtggcc 254
              |||||||||||||||||||||
Sbjct: 105977 tcctccagaggagaagtggcc 105997

>emb|AL627098.30| Mouse DNA sequence from clone RP23-108K17 on chromosome 4, complete
              sequence
          Length = 208131

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 133    cacacataatcacacacatat 153
              |||||||||||||||||||||
Sbjct: 102177 cacacataatcacacacatat 102197

>gb|AC132258.3| Mus musculus BAC clone RP24-361F13 from 1, complete sequence
          Length = 130493

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 132   tcacacataatcacacacata 152
             |||||||||||||||||||||
Sbjct: 66801 tcacacataatcacacacata 66821


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,439,132
Number of Sequences: 3902068
Number of extensions: 5439132
Number of successful extensions: 99220
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99200
Number of HSP's gapped (non-prelim): 20
length of query: 731
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 708
effective length of database: 17,143,297,704
effective search space: 12137454774432
effective search space used: 12137454774432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)