Clone Name | rbasd14f04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NOS_ORYSA (Q6YPG5) Putative nitric-oxide synthase (EC 1.14.13.39) | 168 | 7e-42 | 2 | NOS1_ARATH (Q66GP9) Nitric-oxide synthase 1 (EC 1.14.13.39) (AtN... | 107 | 2e-23 | 3 | METH_MYCLE (Q49775) Methionine synthase (EC 2.1.1.13) (5-methylt... | 29 | 8.9 |
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>NOS_ORYSA (Q6YPG5) Putative nitric-oxide synthase (EC 1.14.13.39)| Length = 547 Score = 168 bits (426), Expect = 7e-42 Identities = 82/111 (73%), Positives = 86/111 (77%) Frame = -3 Query: 517 GQXRAEXWCGLQGVRELQIKYEELDRPASDIAISGLGWIAVEPLGVXXXXXXXXXXXXXX 338 G+ +AE W GLQGVRELQIKYEE DRPA DIAISGLGW+AVEPLGV Sbjct: 437 GKEKAEGWVGLQGVRELQIKYEESDRPACDIAISGLGWVAVEPLGVPSSNPDESAEEEDN 496 Query: 337 XXXELHLRVHVPKPVXVFVRAPLPVGKAASQWYRYQELTEVEEELRPKWHY 185 ELHLRVHVPKPV +FVR PLPVGKAASQWYRYQELTE EEELRPKWHY Sbjct: 497 ESGELHLRVHVPKPVEIFVRPPLPVGKAASQWYRYQELTEEEEELRPKWHY 547
>NOS1_ARATH (Q66GP9) Nitric-oxide synthase 1 (EC 1.14.13.39) (AtNOS1)| Length = 561 Score = 107 bits (268), Expect = 2e-23 Identities = 51/111 (45%), Positives = 73/111 (65%) Frame = -3 Query: 517 GQXRAEXWCGLQGVRELQIKYEELDRPASDIAISGLGWIAVEPLGVXXXXXXXXXXXXXX 338 G+ + + W GLQ R LQI+ + RPASD+AISGLGWI++EP+ Sbjct: 454 GKNQMQEWKGLQSHRLLQIEINDAKRPASDVAISGLGWISIEPI---RKTRGTEPRDLNE 510 Query: 337 XXXELHLRVHVPKPVXVFVRAPLPVGKAASQWYRYQELTEVEEELRPKWHY 185 E+H+ V VPKPV VF+R LP+G + ++WY+Y+ELT+ EEE+RPKW++ Sbjct: 511 AEHEIHICVSVPKPVEVFLRPTLPIGTSGTEWYQYRELTDKEEEVRPKWYF 561
>METH_MYCLE (Q49775) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1206 Score = 28.9 bits (63), Expect = 8.9 Identities = 24/68 (35%), Positives = 24/68 (35%), Gaps = 2/68 (2%) Frame = -3 Query: 415 GLGWIAVEPLGVXXXXXXXXXXXXXXXXXELHLRVHVPKPVXVFVRAPLPVGKAASQWYR 236 G AVEPLGV HL H PV V A LPV A Y Sbjct: 215 GAALAAVEPLGVDMIGLNCATGPAEMSEHLRHLSKHARIPVSVMPNAGLPVLGAKGAEYP 274 Query: 235 YQ--ELTE 218 Q EL E Sbjct: 275 LQPDELAE 282 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,049,163 Number of Sequences: 219361 Number of extensions: 1126538 Number of successful extensions: 2766 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2715 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2765 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)