Clone Name | rbasd14f03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NOS_ORYSA (Q6YPG5) Putative nitric-oxide synthase (EC 1.14.13.39) | 181 | 1e-57 | 2 | NOS1_ARATH (Q66GP9) Nitric-oxide synthase 1 (EC 1.14.13.39) (AtN... | 115 | 5e-32 | 3 | CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48) | 30 | 4.2 | 4 | CUBN_HUMAN (O60494) Cubilin precursor (Intrinsic factor-cobalami... | 30 | 5.6 | 5 | CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48) | 30 | 7.2 | 6 | ADA15_MOUSE (O88839) ADAM 15 precursor (EC 3.4.24.-) (A disinteg... | 29 | 9.5 |
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>NOS_ORYSA (Q6YPG5) Putative nitric-oxide synthase (EC 1.14.13.39)| Length = 547 Score = 181 bits (459), Expect(2) = 1e-57 Identities = 87/114 (76%), Positives = 91/114 (79%) Frame = -2 Query: 528 PPTGQERAEGWCGLQGVRELQIKYEELDRPASDIAISGLGWIAVEPLGVXXXXXXXXXXX 349 PP G+E+AEGW GLQGVRELQIKYEE DRPA DIAISGLGW+AVEPLGV Sbjct: 434 PPAGKEKAEGWVGLQGVRELQIKYEESDRPACDIAISGLGWVAVEPLGVPSSNPDESAEE 493 Query: 348 XXXXXXELHLRVHVPKPVEVFVRAPLPVGKAASQWYRYQELTEVEEELRPKWHY 187 ELHLRVHVPKPVE+FVR PLPVGKAASQWYRYQELTE EEELRPKWHY Sbjct: 494 EDNESGELHLRVHVPKPVEIFVRPPLPVGKAASQWYRYQELTEEEEELRPKWHY 547 Score = 62.0 bits (149), Expect(2) = 1e-57 Identities = 28/30 (93%), Positives = 29/30 (96%) Frame = -1 Query: 613 GPKKLSINMVPTTEADEFYKREVGVTLTPP 524 GPKKL INMVPTTEADEFY+REVGVTLTPP Sbjct: 406 GPKKLKINMVPTTEADEFYEREVGVTLTPP 435
>NOS1_ARATH (Q66GP9) Nitric-oxide synthase 1 (EC 1.14.13.39) (AtNOS1)| Length = 561 Score = 115 bits (289), Expect(2) = 5e-32 Identities = 54/114 (47%), Positives = 77/114 (67%) Frame = -2 Query: 528 PPTGQERAEGWCGLQGVRELQIKYEELDRPASDIAISGLGWIAVEPLGVXXXXXXXXXXX 349 PP+G+ + + W GLQ R LQI+ + RPASD+AISGLGWI++EP+ Sbjct: 451 PPSGKNQMQEWKGLQSHRLLQIEINDAKRPASDVAISGLGWISIEPI---RKTRGTEPRD 507 Query: 348 XXXXXXELHLRVHVPKPVEVFVRAPLPVGKAASQWYRYQELTEVEEELRPKWHY 187 E+H+ V VPKPVEVF+R LP+G + ++WY+Y+ELT+ EEE+RPKW++ Sbjct: 508 LNEAEHEIHICVSVPKPVEVFLRPTLPIGTSGTEWYQYRELTDKEEEVRPKWYF 561 Score = 41.6 bits (96), Expect(2) = 5e-32 Identities = 18/31 (58%), Positives = 23/31 (74%) Frame = -1 Query: 613 GPKKLSINMVPTTEADEFYKREVGVTLTPPN 521 GPK L I+ VPT A FY++E+GV LTPP+ Sbjct: 423 GPKALEIHAVPTKTATAFYEKELGVLLTPPS 453
>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)| Length = 2441 Score = 30.4 bits (67), Expect = 4.2 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = +2 Query: 386 PSGSTAIHPSPDIAMSLAGLSSSSYFICNSRTP*SPHHPSALSWPVGGSQ 535 P + +HP+P A + AG+ S + TP P P+ S PV Q Sbjct: 849 PVTQSPLHPTPPPASTAAGMPSLQHPTAPGMTPPQPAAPTQPSTPVSSGQ 898
>CUBN_HUMAN (O60494) Cubilin precursor (Intrinsic factor-cobalamin receptor)| (Intrinsic factor-vitamin B12 receptor) (460 kDa receptor) (Intestinal intrinsic factor receptor) Length = 3623 Score = 30.0 bits (66), Expect = 5.6 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%) Frame = +1 Query: 4 RGFLNRFHQL----ILS*NYEFISLSDHPRNIMSGRNCNWITQS 123 RGF +F Q IL+ +++ +S P N + +NC+WI Q+ Sbjct: 1610 RGFRAQFRQACGGHILTSSFDTVSSPRFPANYPNNQNCSWIIQA 1653
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +2 Query: 386 PSGSTAIHPSPDIAMSLAGLSSSSYFICNSRTP*SPHHPSALSWPVGGS 532 P + +HP+P A + AG+ S + TP P P+ S PV S Sbjct: 847 PVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSS 895
>ADA15_MOUSE (O88839) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 15) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein 15) (MDC-15) (Metalloprotease RGD disintegrin protein) (Metargidin) (AD56) Length = 864 Score = 29.3 bits (64), Expect = 9.5 Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Frame = +3 Query: 288 RPRLVWVHVLLNATRHCRR--LLPQCCYQGR*MAHQVVQPRSIRVQISQCH*QAYQALHI 461 RP LVW + TR L CCY+GR H P S +S C + L + Sbjct: 95 RPTLVWYQP--DGTRMVSEGYSLENCCYRGRVQGH----PSS---WVSLCACSGIRGLIV 145 Query: 462 LSAIRERPEAHTILQLSPGRL 524 LS PE L+L PG L Sbjct: 146 LS-----PERGYTLELGPGDL 161 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,933,874 Number of Sequences: 219361 Number of extensions: 1653697 Number of successful extensions: 4101 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3970 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4095 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)