Clone Name	rbasd14f03
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_463810.1| Oryza sativa (japonica cultivar-group), mRNA	278	2e-71
2	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
3	dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
4	dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
5	gb|AY110367.1| Zea mays CL5928_2 mRNA sequence	111	3e-21
6	gb|AC123644.8| Mus musculus chromosome 15, clone RP23-85G7, comp...	44	0.53
7	ref|NM_188620.1| Oryza sativa (japonica cultivar-group), Ozsa822...	42	2.1
8	emb|AL353814.1|ATF26G5 Arabidopsis thaliana DNA chromosome 3, BA...	42	2.1
9	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	42	2.1
10	dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia...	42	2.1
11	dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic D...	42	2.1
12	gb|BC075464.1| Xenopus tropicalis ras homolog gene family, membe...	40	8.3
13	gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet...	40	8.3
14	ref|XM_361585.1| Magnaporthe grisea 70-15 hypothetical protein (...	40	8.3
15	ref|XM_415436.1| PREDICTED: Gallus gallus similar to XPMC2 preve...	40	8.3
16	ref|XM_605910.2| PREDICTED: Bos taurus similar to Putative G-pro...	40	8.3
17	ref|XM_955702.1| Neurospora crassa OR74A hypothetical protein (N...	40	8.3
18	ref|XM_331319.1| Neurospora crassa OR74A hypothetical protein (N...	40	8.3
19	gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome	40	8.3
20	gb|AC133933.4| Mus musculus BAC clone RP24-333C16 from chromosom...	40	8.3
21	emb|CT030477.1| Xenopus tropicalis finished cDNA, clone TGas082l20	40	8.3
22	gb|AY281355.1| Uncultured Acidobacteria bacterium clone 39p18 ge...	40	8.3
23	emb|AL662918.7| Human DNA sequence from clone RP11-176B3 on chro...	40	8.3
24	emb|AL355522.11| Human DNA sequence from clone RP11-546O15 on ch...	40	8.3
25	gb|AE017157.1| Chlamydophila pneumoniae TW-183, section 1 of 4 o...	40	8.3
26	emb|AL035448.29|HS742J24 Human DNA sequence from clone RP4-742J2...	40	8.3
27	emb|AL035461.11|HS967N21 Human DNA sequence from clone RP5-967N2...	40	8.3
28	ref|NM_001006724.1| Xenopus tropicalis ras homolog gene family, ...	40	8.3
29	emb|BX294024.1|NC20H10 Neurospora crassa DNA linkage group V Cos...	40	8.3
30	gb|AC110053.3| Homo sapiens chromosome 8, clone CTD-3145H4, comp...	40	8.3
31	gb|AC046195.9| Homo sapiens chromosome 8, clone RP11-238K6, comp...	40	8.3
32	gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome	40	8.3
33	gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome	40	8.3
34	dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, compl...	40	8.3
35	gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, compl...	40	8.3
36	emb|AL049836.3|CNS0000H Human chromosome 14 DNA sequence BAC R-1...	40	8.3
37	gb|AC005138.1|AC005138 Homo sapiens chromosome 17, clone hRPK.26...	40	8.3
38	gb|AC147053.3| Mus musculus BAC clone RP23-87B16 from 6, complet...	40	8.3
39	gb|AC148332.3| Mus musculus BAC clone RP23-326L8 from 6, complet...	40	8.3
40	gb|AC150746.2| Mus musculus BAC clone RP23-364B18 from 6, comple...	40	8.3
41	emb|AL844149.4| Mouse DNA sequence from clone RP23-194D5 on chro...	40	8.3

---

>ref|XM_463810.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1644

 Score =  278 bits (140), Expect = 2e-71
 Identities = 357/428 (83%), Gaps = 1/428 (0%)
 Strand = Plus / Minus

                                                                        
Query: 186  agtaatgccacttaggtctcagctcctcttctacctccgtcagctcctggtaccggtacc 245
            |||||||||| |||||||||| |||||||||| |||| |||| ||||||||| | |||||
Sbjct: 1642 agtaatgccatttaggtctcaactcctcttcttcctcggtcaactcctggtatctgtacc 1583

                                                                        
Query: 246  actgtgatgctgctttaccgacgggcagtggggcacggacaaagacctcgactggtttgg 305
            | || |||||||||||||| || |||| ||| |  |||||||||| ||| || || ||||
Sbjct: 1582 attgcgatgctgctttaccaacaggcaatggaggtcggacaaagatctcaacaggcttgg 1523

                                                                        
Query: 306  gtacatgtactcttaaatgcaactcgccactgccgccgccttcttcctcaatgctgctat 365
            | ||||||||||| |||||||  || |||||  |   | |||||||||||   ||   ||
Sbjct: 1522 gaacatgtactctcaaatgcagttcaccactctcattgtcttcttcctcagcactctcat 1463

                                                                        
Query: 366  cagggtcgctagatggcacaccaagtggttcaaccgcgatccatccgagtccagatatcg 425
            | |||| ||| ||||||||||||||||| |||||||| | ||| ||||| ||||| || |
Sbjct: 1462 ctgggttgcttgatggcacaccaagtggctcaaccgcaacccacccgagaccagaaattg 1403

                                                                        
Query: 426  caatgtcactagcaggcctatcaagctcttcatattttatctgcaattcgcgaacgccct 485
            ||||||||| |||||| ||||||  |||||| |||||||||||||| || ||||| ||||
Sbjct: 1402 caatgtcacaagcaggtctatcagactcttcgtattttatctgcaactcacgaacaccct 1343

                                                                        
Query: 486  gaagcccacaccatccttcagctctctcctggccggttggggggagtcaatgtaactcct 545
            | || |||  ||||||||||||  |||| | ||| | |||||| ||||||||||||||| 
Sbjct: 1342 gcagaccaacccatccttcagccttctctttgccagctggggg-agtcaatgtaactcca 1284

                                                                        
Query: 546  acttctctcttataaaattcatctgcttctgtggtggggaccatattaatacttagcttc 605
            |||||||||| |||||||||||||||||||||||| ||||||||||||||  ||||||||
Sbjct: 1283 acttctctctcataaaattcatctgcttctgtggttgggaccatattaatctttagcttc 1224

                    
Query: 606  tttggtcc 613
            || |||||
Sbjct: 1223 ttgggtcc 1216

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score =  135 bits (68), Expect = 2e-28
 Identities = 209/256 (81%)
 Strand = Plus / Minus

                                                                          
Query: 186    agtaatgccacttaggtctcagctcctcttctacctccgtcagctcctggtaccggtacc 245
              |||||||||| |||||||||| |||||||||| |||| |||| ||||||||| | |||||
Sbjct: 265158 agtaatgccatttaggtctcaactcctcttcttcctcggtcaactcctggtatctgtacc 265099

                                                                          
Query: 246    actgtgatgctgctttaccgacgggcagtggggcacggacaaagacctcgactggtttgg 305
              | || |||||||||||||| || |||| ||| |  |||||||||| ||| || || ||||
Sbjct: 265098 attgcgatgctgctttaccaacaggcaatggaggtcggacaaagatctcaacaggcttgg 265039

                                                                          
Query: 306    gtacatgtactcttaaatgcaactcgccactgccgccgccttcttcctcaatgctgctat 365
              | ||||||||||| |||||||  || |||||  |   | |||||||||||   ||   ||
Sbjct: 265038 gaacatgtactctcaaatgcagttcaccactctcattgtcttcttcctcagcactctcat 264979

                                                                          
Query: 366    cagggtcgctagatggcacaccaagtggttcaaccgcgatccatccgagtccagatatcg 425
              | |||| ||| ||||||||||||||||| |||||||| | ||| ||||| ||||| || |
Sbjct: 264978 ctgggttgcttgatggcacaccaagtggctcaaccgcaacccacccgagaccagaaattg 264919

                              
Query: 426    caatgtcactagcagg 441
              ||||||||| ||||||
Sbjct: 264918 caatgtcacaagcagg 264903



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                       
Query: 557    ataaaattcatctgcttctgtggtggggaccatattaatacttagcttctttggtcc 613
              |||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||
Sbjct: 264154 ataaaattcatctgcttctgtggttgggaccatattaatctttagcttcttgggtcc 264098



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 96/114 (84%), Gaps = 1/114 (0%)
 Strand = Plus / Minus

                                                                          
Query: 442    cctatcaagctcttcatattttatctgcaattcgcgaacgccctgaagcccacaccatcc 501
              |||||||  |||||| |||||||||||||| || ||||| ||||| || |||  ||||||
Sbjct: 264714 cctatcagactcttcgtattttatctgcaactcacgaacaccctgcagaccaacccatcc 264655

                                                                    
Query: 502    ttcagctctctcctggccggttggggggagtcaatgtaactcctacttctctct 555
              ||||||  |||| | ||| | |||||| ||||||||||||||| ||||||||||
Sbjct: 264654 ttcagccttctctttgccagctggggg-agtcaatgtaactccaacttctctct 264602

---

>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_C06
          Length = 110989

 Score =  135 bits (68), Expect = 2e-28
 Identities = 209/256 (81%)
 Strand = Plus / Minus

                                                                         
Query: 186   agtaatgccacttaggtctcagctcctcttctacctccgtcagctcctggtaccggtacc 245
             |||||||||| |||||||||| |||||||||| |||| |||| ||||||||| | |||||
Sbjct: 75133 agtaatgccatttaggtctcaactcctcttcttcctcggtcaactcctggtatctgtacc 75074

                                                                         
Query: 246   actgtgatgctgctttaccgacgggcagtggggcacggacaaagacctcgactggtttgg 305
             | || |||||||||||||| || |||| ||| |  |||||||||| ||| || || ||||
Sbjct: 75073 attgcgatgctgctttaccaacaggcaatggaggtcggacaaagatctcaacaggcttgg 75014

                                                                         
Query: 306   gtacatgtactcttaaatgcaactcgccactgccgccgccttcttcctcaatgctgctat 365
             | ||||||||||| |||||||  || |||||  |   | |||||||||||   ||   ||
Sbjct: 75013 gaacatgtactctcaaatgcagttcaccactctcattgtcttcttcctcagcactctcat 74954

                                                                         
Query: 366   cagggtcgctagatggcacaccaagtggttcaaccgcgatccatccgagtccagatatcg 425
             | |||| ||| ||||||||||||||||| |||||||| | ||| ||||| ||||| || |
Sbjct: 74953 ctgggttgcttgatggcacaccaagtggctcaaccgcaacccacccgagaccagaaattg 74894

                             
Query: 426   caatgtcactagcagg 441
             ||||||||| ||||||
Sbjct: 74893 caatgtcacaagcagg 74878



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                      
Query: 557   ataaaattcatctgcttctgtggtggggaccatattaatacttagcttctttggtcc 613
             |||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||
Sbjct: 74129 ataaaattcatctgcttctgtggttgggaccatattaatctttagcttcttgggtcc 74073



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 96/114 (84%), Gaps = 1/114 (0%)
 Strand = Plus / Minus

                                                                         
Query: 442   cctatcaagctcttcatattttatctgcaattcgcgaacgccctgaagcccacaccatcc 501
             |||||||  |||||| |||||||||||||| || ||||| ||||| || |||  ||||||
Sbjct: 74689 cctatcagactcttcgtattttatctgcaactcacgaacaccctgcagaccaacccatcc 74630

                                                                   
Query: 502   ttcagctctctcctggccggttggggggagtcaatgtaactcctacttctctct 555
             ||||||  |||| | ||| | |||||| ||||||||||||||| ||||||||||
Sbjct: 74629 ttcagccttctctttgccagctggggg-agtcaatgtaactccaacttctctct 74577

---

>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             clone:OJA1212_C06
          Length = 113554

 Score =  135 bits (68), Expect = 2e-28
 Identities = 209/256 (81%)
 Strand = Plus / Minus

                                                                         
Query: 186   agtaatgccacttaggtctcagctcctcttctacctccgtcagctcctggtaccggtacc 245
             |||||||||| |||||||||| |||||||||| |||| |||| ||||||||| | |||||
Sbjct: 77698 agtaatgccatttaggtctcaactcctcttcttcctcggtcaactcctggtatctgtacc 77639

                                                                         
Query: 246   actgtgatgctgctttaccgacgggcagtggggcacggacaaagacctcgactggtttgg 305
             | || |||||||||||||| || |||| ||| |  |||||||||| ||| || || ||||
Sbjct: 77638 attgcgatgctgctttaccaacaggcaatggaggtcggacaaagatctcaacaggcttgg 77579

                                                                         
Query: 306   gtacatgtactcttaaatgcaactcgccactgccgccgccttcttcctcaatgctgctat 365
             | ||||||||||| |||||||  || |||||  |   | |||||||||||   ||   ||
Sbjct: 77578 gaacatgtactctcaaatgcagttcaccactctcattgtcttcttcctcagcactctcat 77519

                                                                         
Query: 366   cagggtcgctagatggcacaccaagtggttcaaccgcgatccatccgagtccagatatcg 425
             | |||| ||| ||||||||||||||||| |||||||| | ||| ||||| ||||| || |
Sbjct: 77518 ctgggttgcttgatggcacaccaagtggctcaaccgcaacccacccgagaccagaaattg 77459

                             
Query: 426   caatgtcactagcagg 441
             ||||||||| ||||||
Sbjct: 77458 caatgtcacaagcagg 77443



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                      
Query: 557   ataaaattcatctgcttctgtggtggggaccatattaatacttagcttctttggtcc 613
             |||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||
Sbjct: 76694 ataaaattcatctgcttctgtggttgggaccatattaatctttagcttcttgggtcc 76638



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 96/114 (84%), Gaps = 1/114 (0%)
 Strand = Plus / Minus

                                                                         
Query: 442   cctatcaagctcttcatattttatctgcaattcgcgaacgccctgaagcccacaccatcc 501
             |||||||  |||||| |||||||||||||| || ||||| ||||| || |||  ||||||
Sbjct: 77254 cctatcagactcttcgtattttatctgcaactcacgaacaccctgcagaccaacccatcc 77195

                                                                   
Query: 502   ttcagctctctcctggccggttggggggagtcaatgtaactcctacttctctct 555
             ||||||  |||| | ||| | |||||| ||||||||||||||| ||||||||||
Sbjct: 77194 ttcagccttctctttgccagctggggg-agtcaatgtaactccaacttctctct 77142

---

>gb|AY110367.1| Zea mays CL5928_2 mRNA sequence
          Length = 1119

 Score =  111 bits (56), Expect = 3e-21
 Identities = 159/192 (82%), Gaps = 1/192 (0%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccagatatcgcaatgtcactagcaggcctatcaagctcttcatattttatctgcaattcg 475
           ||||| ||||| |||||||  |||||||| ||| | || ||||||||||||| ||| |||
Sbjct: 277 ccagagatcgcgatgtcacaggcaggcctgtcacgttcctcatattttatcttcaactcg 218

                                                                       
Query: 476 cgaacgccctgaagcccacaccatccttcagctctctcctggccggttggggggagtcaa 535
           ||||| || ||||||||   ||||||||||||||||||||  || ||| || ||||||||
Sbjct: 217 cgaaccccttgaagccctgtccatccttcagctctctccttaccagtt-ggcggagtcaa 159

                                                                       
Query: 536 tgtaactcctacttctctcttataaaattcatctgcttctgtggtggggaccatattaat 595
           ||| || || |||||  |||  ||||||| ||| |||||||| || ||||||||||||||
Sbjct: 158 tgtgaccccaacttcagtctcgtaaaattgatcagcttctgttgtcgggaccatattaat 99

                       
Query: 596 acttagcttctt 607
             ||||||||||
Sbjct: 98  ctttagcttctt 87



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 109/130 (83%)
 Strand = Plus / Minus

                                                                       
Query: 186 agtaatgccacttaggtctcagctcctcttctacctccgtcagctcctggtaccggtacc 245
           |||||||||| ||||| ||||||||||||||| |||| |||||||| || ||||||||||
Sbjct: 492 agtaatgccatttaggcctcagctcctcttcttcctctgtcagctcttgataccggtacc 433

                                                                       
Query: 246 actgtgatgctgctttaccgacgggcagtggggcacggacaaagacctcgactggtttgg 305
           | || || |||||||| ||||| || | ||| | ||| |  |||||||| || |||||||
Sbjct: 432 attgcgacgctgctttgccgacaggtantggaggacgcatgaagacctcaaccggtttgg 373

                     
Query: 306 gtacatgtac 315
           | ||||||||
Sbjct: 372 gcacatgtac 363

---

>gb|AC123644.8| Mus musculus chromosome 15, clone RP23-85G7, complete sequence
          Length = 186827

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 563   ttcatctgcttctgtggtggggacca 588
             |||||||||||||||| |||||||||
Sbjct: 37046 ttcatctgcttctgtgttggggacca 37021

---

>ref|NM_188620.1| Oryza sativa (japonica cultivar-group), Ozsa8223 predicted mRNA
          Length = 1329

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 339 cgccgccttcttcctcaatgc 359
           |||||||||||||||||||||
Sbjct: 82  cgccgccttcttcctcaatgc 62

---

>emb|AL353814.1|ATF26G5 Arabidopsis thaliana DNA chromosome 3, BAC clone F26G5
          Length = 102873

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   taaaattcatctgcttctgtg 578
             |||||||||||||||||||||
Sbjct: 24080 taaaattcatctgcttctgtg 24060

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 339     cgccgccttcttcctcaatgc 359
               |||||||||||||||||||||
Sbjct: 7275100 cgccgccttcttcctcaatgc 7275080

---

>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 492     cacaccatccttcagctctct 512
               |||||||||||||||||||||
Sbjct: 2486218 cacaccatccttcagctctct 2486238

---

>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431F01
          Length = 143209

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 339   cgccgccttcttcctcaatgc 359
             |||||||||||||||||||||
Sbjct: 76530 cgccgccttcttcctcaatgc 76510

---

>gb|BC075464.1| Xenopus tropicalis ras homolog gene family, member T1, mRNA (cDNA
            clone MGC:89266 IMAGE:6976815), complete cds
          Length = 2921

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 328  ctcgccactgccgccgcctt 347
            ||||||||||||||||||||
Sbjct: 1748 ctcgccactgccgccgcctt 1767

---

>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    caagctcttcatattttatc 466
              ||||||||||||||||||||
Sbjct: 390581 caagctcttcatattttatc 390600

---

>ref|XM_361585.1| Magnaporthe grisea 70-15 hypothetical protein (MG04059.4) partial
           mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 aactcgccactgccgccgcc 345
           ||||||||||||||||||||
Sbjct: 254 aactcgccactgccgccgcc 235

---

>ref|XM_415436.1| PREDICTED: Gallus gallus similar to XPMC2 prevents mitotic
           catastrophe 2 homolog; Xenopus prevents mitotic
           catastrophe 2 homolog (LOC417153), mRNA
          Length = 2013

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 cgccactgccgccgccttct 349
           ||||||||||||||||||||
Sbjct: 167 cgccactgccgccgccttct 148

---

>ref|XM_605910.2| PREDICTED: Bos taurus similar to Putative G-protein coupled receptor
            41 (LOC527517), mRNA
          Length = 1574

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  tctcagctcctcttctacct 221
            ||||||||||||||||||||
Sbjct: 1340 tctcagctcctcttctacct 1321

---

>ref|XM_955702.1| Neurospora crassa OR74A hypothetical protein (NCU08928.1) partial
            mRNA
          Length = 2754

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 343  gccttcttcctcaatgctgc 362
            ||||||||||||||||||||
Sbjct: 2470 gccttcttcctcaatgctgc 2489

---

>ref|XM_331319.1| Neurospora crassa OR74A hypothetical protein (NCU08928.1) partial
            mRNA
          Length = 2754

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 343  gccttcttcctcaatgctgc 362
            ||||||||||||||||||||
Sbjct: 2470 gccttcttcctcaatgctgc 2489

---

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 204     tcagctcctcttctacctccgtcagctc 231
               |||||||||||||  |||||||||||||
Sbjct: 2125642 tcagctcctcttcatcctccgtcagctc 2125669

---

>gb|AC133933.4| Mus musculus BAC clone RP24-333C16 from chromosome 18, complete sequence
          Length = 219699

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 591    ttaatacttagcttctttgg 610
              ||||||||||||||||||||
Sbjct: 148088 ttaatacttagcttctttgg 148107

---

>emb|CT030477.1| Xenopus tropicalis finished cDNA, clone TGas082l20
          Length = 2919

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 328  ctcgccactgccgccgcctt 347
            ||||||||||||||||||||
Sbjct: 1735 ctcgccactgccgccgcctt 1754

---

>gb|AY281355.1| Uncultured Acidobacteria bacterium clone 39p18 genomic sequence
          Length = 32953

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    cctgaatcgttttcatcagc 31
             ||||||||||||||||||||
Sbjct: 14668 cctgaatcgttttcatcagc 14687

---

>emb|AL662918.7| Human DNA sequence from clone RP11-176B3 on chromosome 1, complete
             sequence
          Length = 90140

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   cacttaggtctcagctcctc 213
             ||||||||||||||||||||
Sbjct: 34913 cacttaggtctcagctcctc 34894

---

>emb|AL355522.11| Human DNA sequence from clone RP11-546O15 on chromosome 6 Contains the 3'
              end of the CLIC5 gene for chloride intracellular channel 5,
              complete sequence
          Length = 182982

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    cagctcctcttctacctccg 224
              ||||||||||||||||||||
Sbjct: 125989 cagctcctcttctacctccg 126008

---

>gb|AE017157.1| Chlamydophila pneumoniae TW-183, section 1 of 4 of the complete genome
          Length = 300923

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 520    ggttggggggagtcaatgta 539
              ||||||||||||||||||||
Sbjct: 285423 ggttggggggagtcaatgta 285404

---

>emb|AL035448.29|HS742J24 Human DNA sequence from clone RP4-742J24 on chromosome 20p11.23-12.3
             Contains the BTBD3 gene for BTB (POZ) domain containing 3
             (KIAA0952), a novel gene and a CpG island, complete
             sequence
          Length = 167075

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 538   taactcctacttctctcttataaa 561
             ||||||||||||| ||||||||||
Sbjct: 71409 taactcctacttccctcttataaa 71386

---

>emb|AL035461.11|HS967N21 Human DNA sequence from clone RP5-967N21 on chromosome 20p12.3-13
             Contains the CHGB gene for chromogranin B (secretogranin
             1), a novel pseudogene, the gene for CGI-09 protein
             (CGI-09), the C20orf154 gene for a novel MCM2/3/5 family
             member, a pseudogene similar to part of cytochrome c
             oxidase I, the C20orf155 gene for a novel CDP-alcohol
             phosphatidyltransferase family member, the 3' end of a
             novel gene and four CpG islands, complete sequence
          Length = 139352

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   acaaagaccaaaaataggca 167
             ||||||||||||||||||||
Sbjct: 84046 acaaagaccaaaaataggca 84065

---

>ref|NM_001006724.1| Xenopus tropicalis ras homolog gene family, member T1 (rhot1), mRNA
          Length = 2921

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 328  ctcgccactgccgccgcctt 347
            ||||||||||||||||||||
Sbjct: 1748 ctcgccactgccgccgcctt 1767

---

>emb|BX294024.1|NC20H10 Neurospora crassa DNA linkage group V Cosmid contig 20H10
          Length = 96283

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   gccttcttcctcaatgctgc 362
             ||||||||||||||||||||
Sbjct: 23192 gccttcttcctcaatgctgc 23211

---

>gb|AC110053.3| Homo sapiens chromosome 8, clone CTD-3145H4, complete sequence
          Length = 142225

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   ggggggagtcaatgtaactc 543
             ||||||||||||||||||||
Sbjct: 26464 ggggggagtcaatgtaactc 26445

---

>gb|AC046195.9| Homo sapiens chromosome 8, clone RP11-238K6, complete sequence
          Length = 161507

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 524  ggggggagtcaatgtaactc 543
            ||||||||||||||||||||
Sbjct: 4838 ggggggagtcaatgtaactc 4857

---

>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome
          Length = 1229853

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 520    ggttggggggagtcaatgta 539
              ||||||||||||||||||||
Sbjct: 553274 ggttggggggagtcaatgta 553293

---

>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome
          Length = 1230230

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 520    ggttggggggagtcaatgta 539
              ||||||||||||||||||||
Sbjct: 288009 ggttggggggagtcaatgta 287990

---

>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence
          Length = 1226565

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 520    ggttggggggagtcaatgta 539
              ||||||||||||||||||||
Sbjct: 287631 ggttggggggagtcaatgta 287612

---

>gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, complete sequence
          Length = 179735

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 591   ttaatacttagcttctttgg 610
             ||||||||||||||||||||
Sbjct: 99652 ttaatacttagcttctttgg 99671

---

>emb|AL049836.3|CNS0000H Human chromosome 14 DNA sequence BAC R-1029J19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 207774

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   ccttcagctctctcctggcc 519
             ||||||||||||||||||||
Sbjct: 70656 ccttcagctctctcctggcc 70675

---

>gb|AC005138.1|AC005138 Homo sapiens chromosome 17, clone hRPK.261_A_13, complete sequence
          Length = 145618

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 520    ggttggggggagtcaatgta 539
              ||||||||||||||||||||
Sbjct: 134113 ggttggggggagtcaatgta 134132

---

>gb|AC147053.3| Mus musculus BAC clone RP23-87B16 from 6, complete sequence
          Length = 218532

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 547   cttctctcttataaaattca 566
             ||||||||||||||||||||
Sbjct: 95962 cttctctcttataaaattca 95943

---

>gb|AC148332.3| Mus musculus BAC clone RP23-326L8 from 6, complete sequence
          Length = 229988

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 547    cttctctcttataaaattca 566
              ||||||||||||||||||||
Sbjct: 156020 cttctctcttataaaattca 156039

---

>gb|AC150746.2| Mus musculus BAC clone RP23-364B18 from 6, complete sequence
          Length = 215490

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 547   cttctctcttataaaattca 566
             ||||||||||||||||||||
Sbjct: 30195 cttctctcttataaaattca 30176

---

>emb|AL844149.4| Mouse DNA sequence from clone RP23-194D5 on chromosome 4, complete
              sequence
          Length = 199774

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 444    tatcaagctcttcatattttatct 467
              |||||||||||||||| |||||||
Sbjct: 107902 tatcaagctcttcatagtttatct 107879


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,258,134
Number of Sequences: 3902068
Number of extensions: 5258134
Number of successful extensions: 106055
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105810
Number of HSP's gapped (non-prelim): 240
length of query: 613
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 590
effective length of database: 17,143,297,704
effective search space: 10114545645360
effective search space used: 10114545645360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---