ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13p20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1225_F07.15 mRNA Length = 1000 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Minus Query: 309 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 368 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 619 Query: 369 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaacagtac 428 ||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||| Sbjct: 618 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacagtac 559 Query: 429 atgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttgagcac 488 ||||||||||| | ||||||||||||||| ||||||||||||||||| || || | |||| Sbjct: 558 atgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggtagcgcac 499 Query: 489 cgattcggcccctcctt 505 || |||||||| ||||| Sbjct: 498 cggttcggcccttcctt 482 Score = 65.9 bits (33), Expect = 2e-07 Identities = 149/184 (80%), Gaps = 14/184 (7%) Strand = Plus / Minus Query: 53 acagagctagctaaaatgagaagccacaatactgaccgaaaaaaccaccatgaataaag- 111 ||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||| Sbjct: 938 acagagctagctaaa-tgagacaccacaatactgaccgaaaa--ccaccaagaataaaga 882 Query: 112 ttacacaa---------cacgcaaaccattcggaatgactgagaggattgagttcttgca 162 |||||||| ||||||||||| | | ||||||||||||| || ||||| | Sbjct: 881 ttacacaacatacccaacacgcaaaccacttgacttgactgagaggat-gaattctttcg 823 Query: 163 gctgccacgacgcagtgtgcatcacgatgccgtacaatttaggaaatgtggcagccaaca 222 ||||||| || |||||||||||||| | | | |||||||| ||||||| |||||| ||| Sbjct: 822 gctgccaggatgcagtgtgcatcacaaagttgaacaatttaagaaatgtagcagccgaca 763 Query: 223 agaa 226 |||| Sbjct: 762 agaa 759
>ref|XM_464458.1| Oryza sativa (japonica cultivar-group), mRNA Length = 991 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Minus Query: 309 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 368 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 602 Query: 369 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaacagtac 428 ||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||| Sbjct: 601 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacagtac 542 Query: 429 atgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttgagcac 488 ||||||||||| | ||||||||||||||| ||||||||||||||||| || || | |||| Sbjct: 541 atgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggtagcgcac 482 Query: 489 cgattcggcccctcctt 505 || |||||||| ||||| Sbjct: 481 cggttcggcccttcctt 465 Score = 65.9 bits (33), Expect = 2e-07 Identities = 149/184 (80%), Gaps = 14/184 (7%) Strand = Plus / Minus Query: 53 acagagctagctaaaatgagaagccacaatactgaccgaaaaaaccaccatgaataaag- 111 ||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||| Sbjct: 921 acagagctagctaaa-tgagacaccacaatactgaccgaaaa--ccaccaagaataaaga 865 Query: 112 ttacacaa---------cacgcaaaccattcggaatgactgagaggattgagttcttgca 162 |||||||| ||||||||||| | | ||||||||||||| || ||||| | Sbjct: 864 ttacacaacatacccaacacgcaaaccacttgacttgactgagaggat-gaattctttcg 806 Query: 163 gctgccacgacgcagtgtgcatcacgatgccgtacaatttaggaaatgtggcagccaaca 222 ||||||| || |||||||||||||| | | | |||||||| ||||||| |||||| ||| Sbjct: 805 gctgccaggatgcagtgtgcatcacaaagttgaacaatttaagaaatgtagcagccgaca 746 Query: 223 agaa 226 |||| Sbjct: 745 agaa 742
>dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A06, full insert sequence Length = 991 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Minus Query: 309 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 368 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 602 Query: 369 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaacagtac 428 ||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||| Sbjct: 601 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacagtac 542 Query: 429 atgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttgagcac 488 ||||||||||| | ||||||||||||||| ||||||||||||||||| || || | |||| Sbjct: 541 atgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggtagcgcac 482 Query: 489 cgattcggcccctcctt 505 || |||||||| ||||| Sbjct: 481 cggttcggcccttcctt 465 Score = 60.0 bits (30), Expect = 1e-05 Identities = 91/110 (82%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 117 caacacgcaaaccattcggaatgactgagaggattgagttcttgcagctgccacgacgca 176 |||||||||||||| | | ||||||||||||| || ||||| | ||||||| || ||| Sbjct: 850 caacacgcaaaccacttgacttgactgagaggat-gaattctttcggctgccaggatgca 792 Query: 177 gtgtgcatcacgatgccgtacaatttaggaaatgtggcagccaacaagaa 226 ||||||||||| | | | |||||||| ||||||| |||||| ||||||| Sbjct: 791 gtgtgcatcacaaagttgaacaatttaagaaatgtagcagccgacaagaa 742 Score = 54.0 bits (27), Expect = 6e-04 Identities = 62/70 (88%), Gaps = 4/70 (5%) Strand = Plus / Minus Query: 53 acagagctagctaaaatgagaagccacaatactgaccgaaaaaaccaccatgaataaag- 111 ||||||||||| ||| ||||| ||||||||||||||| |||||||||| |||||||| Sbjct: 921 acagagctagccaaa-tgagacaccacaatactgaccg--aaaaccaccaagaataaaga 865 Query: 112 ttacacaaca 121 |||||||||| Sbjct: 864 ttacacaaca 855
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Plus Query: 309 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 368 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5346040 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 5346099 Query: 369 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaacagtac 428 ||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||| Sbjct: 5346100 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacagtac 5346159 Query: 429 atgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttgagcac 488 ||||||||||| | ||||||||||||||| ||||||||||||||||| || || | |||| Sbjct: 5346160 atgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggtagcgcac 5346219 Query: 489 cgattcggcccctcctt 505 || |||||||| ||||| Sbjct: 5346220 cggttcggcccttcctt 5346236 Score = 65.9 bits (33), Expect = 2e-07 Identities = 149/184 (80%), Gaps = 14/184 (7%) Strand = Plus / Plus Query: 53 acagagctagctaaaatgagaagccacaatactgaccgaaaaaaccaccatgaataaag- 111 ||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||| Sbjct: 5345780 acagagctagctaaa-tgagacaccacaatactgaccgaaaa--ccaccaagaataaaga 5345836 Query: 112 ttacacaa---------cacgcaaaccattcggaatgactgagaggattgagttcttgca 162 |||||||| ||||||||||| | | ||||||||||||| || ||||| | Sbjct: 5345837 ttacacaacatacccaacacgcaaaccacttgacttgactgagaggat-gaattctttcg 5345895 Query: 163 gctgccacgacgcagtgtgcatcacgatgccgtacaatttaggaaatgtggcagccaaca 222 ||||||| || |||||||||||||| | | | |||||||| ||||||| |||||| ||| Sbjct: 5345896 gctgccaggatgcagtgtgcatcacaaagttgaacaatttaagaaatgtagcagccgaca 5345955 Query: 223 agaa 226 |||| Sbjct: 5345956 agaa 5345959
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Plus Query: 309 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 368 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 72343 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 72402 Query: 369 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaacagtac 428 ||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||| Sbjct: 72403 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacagtac 72462 Query: 429 atgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttgagcac 488 ||||||||||| | ||||||||||||||| ||||||||||||||||| || || | |||| Sbjct: 72463 atgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggtagcgcac 72522 Query: 489 cgattcggcccctcctt 505 || |||||||| ||||| Sbjct: 72523 cggttcggcccttcctt 72539 Score = 65.9 bits (33), Expect = 2e-07 Identities = 149/184 (80%), Gaps = 14/184 (7%) Strand = Plus / Plus Query: 53 acagagctagctaaaatgagaagccacaatactgaccgaaaaaaccaccatgaataaag- 111 ||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||| Sbjct: 72083 acagagctagctaaa-tgagacaccacaatactgaccgaaaa--ccaccaagaataaaga 72139 Query: 112 ttacacaa---------cacgcaaaccattcggaatgactgagaggattgagttcttgca 162 |||||||| ||||||||||| | | ||||||||||||| || ||||| | Sbjct: 72140 ttacacaacatacccaacacgcaaaccacttgacttgactgagaggat-gaattctttcg 72198 Query: 163 gctgccacgacgcagtgtgcatcacgatgccgtacaatttaggaaatgtggcagccaaca 222 ||||||| || |||||||||||||| | | | |||||||| ||||||| |||||| ||| Sbjct: 72199 gctgccaggatgcagtgtgcatcacaaagttgaacaatttaagaaatgtagcagccgaca 72258 Query: 223 agaa 226 |||| Sbjct: 72259 agaa 72262
>dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106E09, full insert sequence Length = 1000 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Minus Query: 309 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 368 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 619 Query: 369 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaacagtac 428 ||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||| Sbjct: 618 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacagtac 559 Query: 429 atgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttgagcac 488 ||||||||||| | ||||||||||||||| ||||||||||||||||| || || | |||| Sbjct: 558 atgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggtagcgcac 499 Query: 489 cgattcggcccctcctt 505 || |||||||| ||||| Sbjct: 498 cggttcggcccttcctt 482 Score = 65.9 bits (33), Expect = 2e-07 Identities = 149/184 (80%), Gaps = 14/184 (7%) Strand = Plus / Minus Query: 53 acagagctagctaaaatgagaagccacaatactgaccgaaaaaaccaccatgaataaag- 111 ||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||| Sbjct: 938 acagagctagctaaa-tgagacaccacaatactgaccgaaaa--ccaccaagaataaaga 882 Query: 112 ttacacaa---------cacgcaaaccattcggaatgactgagaggattgagttcttgca 162 |||||||| ||||||||||| | | ||||||||||||| || ||||| | Sbjct: 881 ttacacaacatacccaacacgcaaaccacttgacttgactgagaggat-gaattctttcg 823 Query: 163 gctgccacgacgcagtgtgcatcacgatgccgtacaatttaggaaatgtggcagccaaca 222 ||||||| || |||||||||||||| | | | |||||||| ||||||| |||||| ||| Sbjct: 822 gctgccaggatgcagtgtgcatcacaaagttgaacaatttaagaaatgtagcagccgaca 763 Query: 223 agaa 226 |||| Sbjct: 762 agaa 759
>gb|BT016379.1| Zea mays clone Contig212 mRNA sequence Length = 1020 Score = 180 bits (91), Expect = 4e-42 Identities = 154/175 (88%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 |||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||| Sbjct: 632 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 573 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 | || ||||||||||||||||||| |||||| ||||||||||| |||||||| |||| | Sbjct: 572 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagcgcgc 513 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgca 478 |||||| ||| || || | ||||||||||||||| |||||||||||||||||||| Sbjct: 512 agtacaagttcccacaccggcagttgaatcccgtgagcccaaccctcttcctgca 458
>gb|BT019326.1| Zea mays clone Contig1045.F mRNA sequence Length = 779 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 309 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 368 ||||||||||||||||| ||| ||||||| || ||||||||||| || || ||||| ||| Sbjct: 289 atcttgtcgagcttctccgccctcaccacaggattggccttggcaatcgcgtcccttgct 230 Query: 369 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaacagtac 428 |||||||| ||||||||||| |||||||| |||||||| |||||||||| |||||||||| Sbjct: 229 gcagtccgatagtcgaactgacagtcatgtttgtcggagtagcggtgcaccgaacagtac 170 Query: 429 atgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgca 478 ||||| ||||||| |||| | |||||||| |||||||| | ||||||||| Sbjct: 169 atgttcccgcatcggcagctaaatcccgtcagcccaacacgcttcctgca 120
>gb|AY109331.1| Zea mays CL253_2 mRNA sequence Length = 2256 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 309 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 368 |||||||||||||| |||||||||||||| || || |||||||| ||||| ||||| || Sbjct: 1607 atcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccctggca 1548 Query: 369 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaacagtac 428 ||||||||||||||||||| |||||| ||||||||||| |||||||| |||| |||||| Sbjct: 1547 gcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagcgcgcagtac 1488 Query: 429 atgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgca 478 | ||| || || | ||||||||||||||| |||||||||||||||||||| Sbjct: 1487 aagttcccacaccggcagttgaatcccgtgagcccaaccctcttcctgca 1438
>gb|AY105966.1| Zea mays PCO143261 mRNA sequence Length = 1035 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 309 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 368 ||||||||||||||||| ||| ||||||| || ||||||||||| || || ||||| ||| Sbjct: 601 atcttgtcgagcttctccgccctcaccacaggattggccttggcaatcgcgtcccttgct 542 Query: 369 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaacagtac 428 |||||||| ||||||||||| |||||||| |||||||| |||||||||| |||||||||| Sbjct: 541 gcagtccgatagtcgaactgacagtcatgtttgtcggagtagcggtgcaccgaacagtac 482 Query: 429 atgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgca 478 ||||| ||||||| |||| | |||||||| |||||||| | ||||||||| Sbjct: 481 atgttcccgcatcggcagctaaatcccgtcagcccaacacgcttcctgca 432
>gb|AY105867.1| Zea mays PCO143262 mRNA sequence Length = 984 Score = 178 bits (90), Expect = 1e-41 Identities = 159/182 (87%) Strand = Plus / Minus Query: 309 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 368 |||||||| |||||||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 600 atcttgtcaagcttctccgccttcaccactggattggccttggcgatagcgtccctagct 541 Query: 369 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaacagtac 428 ||||| || ||||||||||||||||| || |||||||| |||||||||| |||||||||| Sbjct: 540 gcagttcgatagtcgaactggcagtcgtgtttgtcggagtagcggtgcatcgaacagtac 481 Query: 429 atgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttgagcac 488 |||| ||||||| |||||| || ||||| | |||||| | |||||| || |||| |||| Sbjct: 480 gtgttcccgcatcggcagttaaaacccgtcaacccaacacgcttcctacaggttgcgcac 421 Query: 489 cg 490 || Sbjct: 420 cg 419 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 155 ttcttgcagctgccacgacgcagtgtgcatca 186 ||||||||||||||| || || |||||||||| Sbjct: 759 ttcttgcagctgccaggatgctgtgtgcatca 728
>gb|AY787873.1| Zea mays zinc finger protein (znf1) mRNA, complete cds Length = 1000 Score = 165 bits (83), Expect = 2e-37 Identities = 152/175 (86%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 |||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||| Sbjct: 616 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 557 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 | || ||||||||||||||||||| |||||| ||||||||||| |||||||| || | | Sbjct: 556 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagtgcgc 497 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgca 478 |||||| ||| || || | ||||||||||||||| || ||||||||||||||||| Sbjct: 496 agtacaagttcccacaccggcagttgaatcccgtaagtccaaccctcttcctgca 442
>gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence Length = 941 Score = 165 bits (83), Expect = 2e-37 Identities = 152/175 (86%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 |||| |||||| ||||||| |||||||||||||| || || |||||||| ||||| |||| Sbjct: 638 cctagatcttggcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 579 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 | || ||||||||||||||||||| |||||| ||||||||||| || ||||| |||| | Sbjct: 578 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtaccggtggagcgccc 519 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgca 478 |||||| ||| || || | ||||||||||||||| |||||||||||||||||||| Sbjct: 518 agtacaagttcccacaccggcagttgaatcccgtgagcccaaccctcttcctgca 464
>gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-associated protein-3 (SAP-3) mRNA, complete cds Length = 1132 Score = 161 bits (81), Expect = 4e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 577 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 518 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | | Sbjct: 517 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 458 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 483 |||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| | Sbjct: 457 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 398 Query: 484 agcaccgattcggcccctccttcctcttggggctcac 520 |||||||||| || || ||| ||| ||||||| |||| Sbjct: 397 agcaccgatttggtccttccctccccttggggttcac 361 Score = 44.1 bits (22), Expect = 0.57 Identities = 42/46 (91%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 39 acaatagtacataaacagagctagctaaaatgagaagccacaatac 84 |||||||||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 853 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 810 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 639 cagcaaagatggatgatgaa 620 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 553 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 608 ||||||||||| |||| || | |||||| || ||||||||||| || || |||||| Sbjct: 331 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 276
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 161 bits (81), Expect = 4e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 24109922 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 24109863 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | | Sbjct: 24109862 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 24109803 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 483 |||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| | Sbjct: 24109802 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 24109743 Query: 484 agcaccgattcggcccctccttcctcttggggctcac 520 |||||||||| || || ||| ||| ||||||| |||| Sbjct: 24109742 agcaccgatttggtccttccctccccttggggttcac 24109706 Score = 44.1 bits (22), Expect = 0.57 Identities = 42/46 (91%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 39 acaatagtacataaacagagctagctaaaatgagaagccacaatac 84 |||||||||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 24110198 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 24110155 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 24109984 cagcaaagatggatgatgaa 24109965 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 553 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 608 ||||||||||| |||| || | |||||| || ||||||||||| || || |||||| Sbjct: 24109676 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 24109621
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 161 bits (81), Expect = 4e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 43380 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 43321 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | | Sbjct: 43320 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 43261 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 483 |||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| | Sbjct: 43260 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 43201 Query: 484 agcaccgattcggcccctccttcctcttggggctcac 520 |||||||||| || || ||| ||| ||||||| |||| Sbjct: 43200 agcaccgatttggtccttccctccccttggggttcac 43164 Score = 44.1 bits (22), Expect = 0.57 Identities = 42/46 (91%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 39 acaatagtacataaacagagctagctaaaatgagaagccacaatac 84 |||||||||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 43656 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 43613 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 43442 cagcaaagatggatgatgaa 43423 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 553 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 608 ||||||||||| |||| || | |||||| || ||||||||||| || || |||||| Sbjct: 43134 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 43079
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 161 bits (81), Expect = 4e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 119615 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 119556 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | | Sbjct: 119555 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 119496 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 483 |||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| | Sbjct: 119495 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 119436 Query: 484 agcaccgattcggcccctccttcctcttggggctcac 520 |||||||||| || || ||| ||| ||||||| |||| Sbjct: 119435 agcaccgatttggtccttccctccccttggggttcac 119399 Score = 44.1 bits (22), Expect = 0.57 Identities = 42/46 (91%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 39 acaatagtacataaacagagctagctaaaatgagaagccacaatac 84 |||||||||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 119891 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 119848 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 119677 cagcaaagatggatgatgaa 119658 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 553 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 608 ||||||||||| |||| || | |||||| || ||||||||||| || || |||||| Sbjct: 119369 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 119314
>dbj|AK104562.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D03, full insert sequence Length = 999 Score = 161 bits (81), Expect = 4e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 666 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 607 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | | Sbjct: 606 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 547 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 483 |||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| | Sbjct: 546 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 487 Query: 484 agcaccgattcggcccctccttcctcttggggctcac 520 |||||||||| || || ||| ||| ||||||| |||| Sbjct: 486 agcaccgatttggtccttccctccccttggggttcac 450 Score = 44.1 bits (22), Expect = 0.57 Identities = 42/46 (91%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 39 acaatagtacataaacagagctagctaaaatgagaagccacaatac 84 |||||||||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 942 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 899 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 728 cagcaaagatggatgatgaa 709 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 553 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 608 ||||||||||| |||| || | |||||| || ||||||||||| || || |||||| Sbjct: 420 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 365
>dbj|AK104605.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A12, full insert sequence Length = 1009 Score = 161 bits (81), Expect = 4e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 666 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 607 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | | Sbjct: 606 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 547 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 483 |||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| | Sbjct: 546 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 487 Query: 484 agcaccgattcggcccctccttcctcttggggctcac 520 |||||||||| || || ||| ||| ||||||| |||| Sbjct: 486 agcaccgatttggtccttccctccccttggggttcac 450 Score = 44.1 bits (22), Expect = 0.57 Identities = 42/46 (91%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 39 acaatagtacataaacagagctagctaaaatgagaagccacaatac 84 |||||||||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 942 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 899 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 728 cagcaaagatggatgatgaa 709 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 553 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 608 ||||||||||| |||| || | |||||| || ||||||||||| || || |||||| Sbjct: 420 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 365
>dbj|AK104175.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C11, full insert sequence Length = 1000 Score = 161 bits (81), Expect = 4e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 667 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 608 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | | Sbjct: 607 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 548 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 483 |||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| | Sbjct: 547 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 488 Query: 484 agcaccgattcggcccctccttcctcttggggctcac 520 |||||||||| || || ||| ||| ||||||| |||| Sbjct: 487 agcaccgatttggtccttccctccccttggggttcac 451 Score = 44.1 bits (22), Expect = 0.57 Identities = 42/46 (91%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 39 acaatagtacataaacagagctagctaaaatgagaagccacaatac 84 |||||||||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 943 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 900 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 729 cagcaaagatggatgatgaa 710 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 553 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 608 ||||||||||| |||| || | |||||| || ||||||||||| || || |||||| Sbjct: 421 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 366
>dbj|AK069720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026K20, full insert sequence Length = 1209 Score = 161 bits (81), Expect = 4e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 664 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 605 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | | Sbjct: 604 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 545 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 483 |||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| | Sbjct: 544 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 485 Query: 484 agcaccgattcggcccctccttcctcttggggctcac 520 |||||||||| || || ||| ||| ||||||| |||| Sbjct: 484 agcaccgatttggtccttccctccccttggggttcac 448 Score = 44.1 bits (22), Expect = 0.57 Identities = 42/46 (91%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 39 acaatagtacataaacagagctagctaaaatgagaagccacaatac 84 |||||||||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 940 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 897 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 726 cagcaaagatggatgatgaa 707 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 553 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 608 ||||||||||| |||| || | |||||| || ||||||||||| || || |||||| Sbjct: 418 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 363
>dbj|AK062342.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-F03, full insert sequence Length = 631 Score = 161 bits (81), Expect = 4e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 305 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 246 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | | Sbjct: 245 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 186 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 483 |||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| | Sbjct: 185 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 126 Query: 484 agcaccgattcggcccctccttcctcttggggctcac 520 |||||||||| || || ||| ||| ||||||| |||| Sbjct: 125 agcaccgatttggtccttccctccccttggggttcac 89 Score = 44.1 bits (22), Expect = 0.57 Identities = 42/46 (91%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 39 acaatagtacataaacagagctagctaaaatgagaagccacaatac 84 |||||||||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 581 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 538 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 367 cagcaaagatggatgatgaa 348 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 553 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 608 ||||||||||| |||| || | |||||| || ||||||||||| || || |||||| Sbjct: 59 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 4
>dbj|AK060008.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C08, full insert sequence Length = 1021 Score = 161 bits (81), Expect = 4e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 663 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 604 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | | Sbjct: 603 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 544 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 483 |||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| | Sbjct: 543 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 484 Query: 484 agcaccgattcggcccctccttcctcttggggctcac 520 |||||||||| || || ||| ||| ||||||| |||| Sbjct: 483 agcaccgatttggtccttccctccccttggggttcac 447 Score = 44.1 bits (22), Expect = 0.57 Identities = 42/46 (91%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 39 acaatagtacataaacagagctagctaaaatgagaagccacaatac 84 |||||||||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 939 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 896 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 725 cagcaaagatggatgatgaa 706 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 553 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 608 ||||||||||| |||| || | |||||| || ||||||||||| || || |||||| Sbjct: 417 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 362
>gb|AY515607.1| Zea mays putative zinc finger protein ZmZf mRNA, complete cds Length = 1162 Score = 157 bits (79), Expect = 5e-35 Identities = 151/175 (86%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 |||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||| Sbjct: 808 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 749 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 423 | || ||||||||||||||||||| |||||| ||||||||||| |||||||| || | | Sbjct: 748 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagtgcgc 689 Query: 424 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgca 478 |||||| ||| || || | ||||||||||||||| || |||||||| |||||||| Sbjct: 688 agtacaagttcccacaccggcagttgaatcccgtaagtccaacccttttcctgca 634
>gb|DQ083231.1| Oryza sativa (indica cultivar-group) clone 5B6A82 mRNA sequence Length = 391 Score = 113 bits (57), Expect = 7e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 123 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 64 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgc 416 |||| || ||||| ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 63 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgc 11 Score = 40.1 bits (20), Expect = 8.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 53 acagagctagctaaaatgagaagccacaatac 84 |||||||||||| ||||| ||||||||||||| Sbjct: 386 acagagctagct-aaatgcgaagccacaatac 356 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 185 cagcaaagatggatgatgaa 166
>gb|DQ083227.1| Oryza sativa (indica cultivar-group) clone 2B5A77 mRNA sequence Length = 391 Score = 113 bits (57), Expect = 7e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 304 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 363 ||||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 123 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 64 Query: 364 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgc 416 |||| || ||||| ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 63 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgc 11 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcaaagatggatgatgaa 266 |||||||||||||||||||| Sbjct: 185 cagcaaagatggatgatgaa 166
>gb|DQ083230.1| Oryza sativa (indica cultivar-group) clone 3B12G81 mRNA sequence Length = 449 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 438 catctgcagttgaatcccgttagcccaaccctcttcctgcaagttgagcaccgattcggc 497 |||| |||||||||||| || || ||||||||||||| ||||| ||||||||||| || Sbjct: 438 catcggcagttgaatccggtaagaccaaccctcttccgacaagtggagcaccgatttggt 379 Query: 498 ccctccttcctcttggggctcac 520 || ||| ||| ||||||| |||| Sbjct: 378 ccttccctccccttggggttcac 356 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 553 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 608 ||||||||||| |||| || | |||||| || ||||||||||| || || |||||| Sbjct: 326 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 271
>ref|XM_360295.1| Magnaporthe grisea 70-15 hypothetical protein (MG05669.4) partial mRNA Length = 2892 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 612 gcagccacagccgcaacaacaacagg 637 |||||| ||||||||||||||||||| Sbjct: 516 gcagccgcagccgcaacaacaacagg 541
>gb|AC010066.9| Drosophila melanogaster 3L BAC RPCI98-25O1 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 176056 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 611 cgcagccacagccgcaacaacaacag 636 |||||||||||| ||||||||||||| Sbjct: 64122 cgcagccacagcagcaacaacaacag 64097
>gb|AE003528.3| Drosophila melanogaster chromosome 3L, section 57 of 83 of the complete sequence Length = 283815 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 611 cgcagccacagccgcaacaacaacag 636 |||||||||||| ||||||||||||| Sbjct: 60170 cgcagccacagcagcaacaacaacag 60145
>ref|XM_864952.1| PREDICTED: Bos taurus similar to zinc finger homeodomain 4, transcript variant 3 (LOC539762), mRNA Length = 13873 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 611 cgcagccacagccgcaacaacaaca 635 ||||||||||||||||||| ||||| Sbjct: 5687 cgcagccacagccgcaacagcaaca 5711
>ref|XM_874567.1| PREDICTED: Bos taurus similar to zinc finger homeodomain 4, transcript variant 5 (LOC539762), mRNA Length = 13876 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 611 cgcagccacagccgcaacaacaaca 635 ||||||||||||||||||| ||||| Sbjct: 5689 cgcagccacagccgcaacagcaaca 5713
>ref|XM_589234.2| PREDICTED: Bos taurus similar to zinc finger homeodomain 4, transcript variant 2 (LOC539762), mRNA Length = 13204 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 611 cgcagccacagccgcaacaacaaca 635 ||||||||||||||||||| ||||| Sbjct: 5858 cgcagccacagccgcaacagcaaca 5882
>ref|XM_958987.1| Neurospora crassa OR74A hypothetical protein (NCU00528.1) partial mRNA Length = 2286 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 610 tcgcagccacagccgcaacaacaac 634 |||||||| |||||||||||||||| Sbjct: 388 tcgcagcctcagccgcaacaacaac 412
>ref|XM_324707.1| Neurospora crassa OR74A hypothetical protein (NCU00528.1) partial mRNA Length = 2286 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 610 tcgcagccacagccgcaacaacaac 634 |||||||| |||||||||||||||| Sbjct: 388 tcgcagcctcagccgcaacaacaac 412
>ref|XM_805741.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053508011.110) partial mRNA Length = 1155 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 611 cgcagccacagccgcaacaacaaca 635 ||||||| ||||||||||||||||| Sbjct: 1140 cgcagccgcagccgcaacaacaaca 1116
>gb|AY324386.1| Homo sapiens glucose phosphate isomerase (GPI) gene, complete cds Length = 36706 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 cccaaccctcttcctgcaagt 481 ||||||||||||||||||||| Sbjct: 31959 cccaaccctcttcctgcaagt 31939
>ref|XM_968474.1| PREDICTED: Tribolium castaneum similar to CG32972-PB, isoform B (LOC662374), mRNA Length = 2958 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 612 gcagccacagccgcaacaacaacag 636 |||||||||||||||||| |||||| Sbjct: 231 gcagccacagccgcaacagcaacag 255
>gb|AC104797.3| Homo sapiens BAC clone RP11-327I3 from 4, complete sequence Length = 57338 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 cttggcagattgcaaccattt 288 ||||||||||||||||||||| Sbjct: 56838 cttggcagattgcaaccattt 56858
>gb|AC092073.2| Homo sapiens chromosome 19 clone RP11-618P17, complete sequence Length = 35105 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 cccaaccctcttcctgcaagt 481 ||||||||||||||||||||| Sbjct: 17280 cccaaccctcttcctgcaagt 17260
>gb|AC097514.3| Homo sapiens BAC clone RP11-425J20 from 4, complete sequence Length = 177027 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 cttggcagattgcaaccattt 288 ||||||||||||||||||||| Sbjct: 1500 cttggcagattgcaaccattt 1520
>gb|AC011345.5| Homo sapiens chromosome 5 clone CTC-293E5, complete sequence Length = 105797 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 aatactgaccgaaaaaaccac 100 ||||||||||||||||||||| Sbjct: 63131 aatactgaccgaaaaaaccac 63151
>ref|NM_180890.1| Arabidopsis thaliana DNA binding AT5G59430 transcript variant AT5G59430.1 mRNA, complete cds Length = 2162 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cagcagcaggctgcacaacg 569 |||||||||||||||||||| Sbjct: 1550 cagcagcaggctgcacaacg 1569
>ref|NM_125334.3| Arabidopsis thaliana DNA binding AT5G59430 transcript variant AT5G59430.2 mRNA, complete cds Length = 2356 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cagcagcaggctgcacaacg 569 |||||||||||||||||||| Sbjct: 1744 cagcagcaggctgcacaacg 1763
>ref|XM_636134.1| Dictyostelium discoideum hypothetical protein (DDB0206359), partial mRNA Length = 1194 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 612 gcagccacagccgcaacaacaaca 635 ||||||||||| |||||||||||| Sbjct: 120 gcagccacagcagcaacaacaaca 143
>ref|XM_481171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 609 ctcgcagccacagccgcaacaaca 632 ||||||||||||||| |||||||| Sbjct: 21 ctcgcagccacagccacaacaaca 44
>ref|NM_196306.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0068A07.18), mRNA Length = 1116 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 aacatcagcagcaggctgca 564 |||||||||||||||||||| Sbjct: 218 aacatcagcagcaggctgca 199
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 cctgcaacatcagcagcagg 559 |||||||||||||||||||| Sbjct: 1739744 cctgcaacatcagcagcagg 1739763
>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072N24 map C61883S, complete sequence Length = 163337 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 caacatcagcagcaggctgc 563 |||||||||||||||||||| Sbjct: 141664 caacatcagcagcaggctgc 141645
>gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N13, complete sequence Length = 114057 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 cctgcaacatcagcagcagg 559 |||||||||||||||||||| Sbjct: 60801 cctgcaacatcagcagcagg 60820
>gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, complete sequence Length = 222121 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gatggcatccctagctgcag 372 |||||||||||||||||||| Sbjct: 181645 gatggcatccctagctgcag 181626
>gb|AY286122.1| Cyanidioschyzon merolae DBV201 chromosome 1, complete sequence Length = 422021 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 618 acagccgcaacaacaacaggtgct 641 ||||| |||||||||||||||||| Sbjct: 3328 acagcagcaacaacaacaggtgct 3305
>gb|AY519544.1| Arabidopsis thaliana MYB transcription factor (At5g59430) mRNA, complete cds Length = 1737 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cagcagcaggctgcacaacg 569 |||||||||||||||||||| Sbjct: 1375 cagcagcaggctgcacaacg 1394
>ref|XM_821159.1| Trypanosoma brucei TREU927 clone RPCI93-33N13 hypothetical protein (Tb927.7.6410) partial mRNA Length = 4371 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cctgcaacatcagcagcagg 559 |||||||||||||||||||| Sbjct: 1963 cctgcaacatcagcagcagg 1944
>ref|XM_444959.1| Candida glabrata CBS138 hypothetical protein (CAGL0A04411g) partial mRNA Length = 1968 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcaaagatggatgatgaacc 268 |||||||||||||||||||| Sbjct: 1567 gcaaagatggatgatgaacc 1586
>ref|XM_809564.1| Trypanosoma cruzi strain CL Brener ATP-dependent zinc metallopeptidase (Tc00.1047053511717.170) partial mRNA Length = 2049 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 612 gcagccacagccgcaacaacaaca 635 ||||||||||| |||||||||||| Sbjct: 99 gcagccacagcagcaacaacaaca 122
>ref|XM_815120.1| Trypanosoma cruzi strain CL Brener protein transport protein sec31 (Tc00.1047053506297.290) partial mRNA Length = 3699 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 613 cagccacagccgcaacaacaacag 636 ||||||||||| |||||||||||| Sbjct: 2164 cagccacagccacaacaacaacag 2187
>gb|AC133002.6| Oryza sativa chromosome 11 BAC OJ1123_D06 genomic sequence, complete sequence Length = 88378 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 caacatcagcagcaggctgc 563 |||||||||||||||||||| Sbjct: 10475 caacatcagcagcaggctgc 10456
>gb|AC010091.2| Homo sapiens BAC clone RP11-295A1 from 7, complete sequence Length = 56864 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 54 cagagctagctaaaatgagaagccacaa 81 |||||||||||||||| |||| |||||| Sbjct: 28635 cagagctagctaaaatcagaaaccacaa 28662
>ref|NM_017228.1| Rattus norvegicus atrophin 1 (Atn1), mRNA Length = 4387 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 cagccacagccgcaacaaca 632 |||||||||||||||||||| Sbjct: 1789 cagccacagccgcaacaaca 1808
>gb|AC103849.3| Homo sapiens chromosome 8, clone RP11-75H14, complete sequence Length = 147107 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 451 atcccgttagcccaaccctcttcc 474 |||||||||||||| ||||||||| Sbjct: 28366 atcccgttagcccatccctcttcc 28343
>emb|AL450163.12| Human DNA sequence from clone RP11-384L19 on chromosome 1 Contains part of the gene for C-terminal PDZ domain ligand of neuronal nitric oxide synthase (CAPON), complete sequence Length = 208408 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ttctctgccttcaccactgg 340 |||||||||||||||||||| Sbjct: 119416 ttctctgccttcaccactgg 119435
>emb|AL122058.19|HSJ813D12 Human DNA sequence from clone RP4-813D12 on chromosome 20 Contains the 5' end of the BMP7 gene for bone morphogenetic protein 7 (osteogenic protein 1), two novel genes and a CpG island, complete sequence Length = 101473 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tggatgatgaaccttggcag 275 |||||||||||||||||||| Sbjct: 34937 tggatgatgaaccttggcag 34918
>gb|BT000117.1| Arabidopsis thaliana telomere repeat-binding protein (At5g59430) mRNA, complete cds Length = 1915 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cagcagcaggctgcacaacg 569 |||||||||||||||||||| Sbjct: 1375 cagcagcaggctgcacaacg 1394
>emb|X89453.1|RNDRPLA R.norvegicus mRNA for DRPLA protein Length = 4193 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 cagccacagccgcaacaaca 632 |||||||||||||||||||| Sbjct: 1584 cagccacagccgcaacaaca 1603
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcaaagatggatgatgaacc 268 |||||||||||||||||||| Sbjct: 430451 gcaaagatggatgatgaacc 430470
>gb|AF332547.1| Pseudomonas aeruginosa flagellar hook-associated protein 1 FlgK (flgK), flagellar hook-associated protein type 3 FlgL (flgL), and flagellar glycosyl transferase (fgtA) genes, complete cds; and unknown genes Length = 19758 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ttggccttggcgatggcatc 361 |||||||||||||||||||| Sbjct: 560 ttggccttggcgatggcatc 541
>emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 in linkage group 22, complete sequence Length = 201928 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aatagtacataaacagagct 60 |||||||||||||||||||| Sbjct: 366 aatagtacataaacagagct 385
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 aacatcagcagcaggctgca 564 |||||||||||||||||||| Sbjct: 119471 aacatcagcagcaggctgca 119490
>gb|AY128382.1| Arabidopsis thaliana telomere repeat-binding protein (At5g59430) mRNA, complete cds Length = 2200 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cagcagcaggctgcacaacg 569 |||||||||||||||||||| Sbjct: 1588 cagcagcaggctgcacaacg 1607
>gb|AC107952.5| Homo sapiens chromosome 8, clone RP11-140I16, complete sequence Length = 142102 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 451 atcccgttagcccaaccctcttcc 474 |||||||||||||| ||||||||| Sbjct: 119123 atcccgttagcccatccctcttcc 119100
>gb|AC068025.12| Homo sapiens chromosome 17, clone RP11-802D6, complete sequence Length = 190194 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 catgaataaagttacacaac 120 |||||||||||||||||||| Sbjct: 99610 catgaataaagttacacaac 99629
>emb|BX908757.10| Zebrafish DNA sequence from clone DKEY-206L1 in linkage group 22, complete sequence Length = 143845 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aatagtacataaacagagct 60 |||||||||||||||||||| Sbjct: 142211 aatagtacataaacagagct 142230
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 aacatcagcagcaggctgca 564 |||||||||||||||||||| Sbjct: 164222 aacatcagcagcaggctgca 164203
>gb|U31777.1|RNU31777 Rattus norvegicus atrophin-1 (DRPLA) mRNA, complete cds Length = 4387 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 cagccacagccgcaacaaca 632 |||||||||||||||||||| Sbjct: 1789 cagccacagccgcaacaaca 1808
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 caacatcagcagcaggctgc 563 |||||||||||||||||||| Sbjct: 10047883 caacatcagcagcaggctgc 10047864
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 aacatcagcagcaggctgca 564 |||||||||||||||||||| Sbjct: 12599384 aacatcagcagcaggctgca 12599403
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 609 ctcgcagccacagccgcaacaaca 632 ||||||||||||||| |||||||| Sbjct: 10359919 ctcgcagccacagccacaacaaca 10359942
>gb|AC093307.5| Homo sapiens chromosome 5 clone RP11-810C16, complete sequence Length = 176199 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 caaccctcttcctgcaagtt 482 |||||||||||||||||||| Sbjct: 126703 caaccctcttcctgcaagtt 126684
>emb|BX830705.1|CNS0A1NQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2247 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cagcagcaggctgcacaacg 569 |||||||||||||||||||| Sbjct: 1742 cagcagcaggctgcacaacg 1761
>emb|BX830199.1|CNS0A063 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZG02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 550 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cagcagcaggctgcacaacg 569 |||||||||||||||||||| Sbjct: 18 cagcagcaggctgcacaacg 37
>gb|AY865071.1| Drosophila melanogaster strain Zm6 SR-CIII and SR-CI genes, complete cds Length = 3801 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 ccacagccgcaacaacaaca 635 |||||||||||||||||||| Sbjct: 3049 ccacagccgcaacaacaaca 3068
>emb|AL805978.10| Mouse DNA sequence from clone RP23-344I3 on chromosome X, complete sequence Length = 190744 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 612 gcagccacagccgcaacaacaaca 635 ||||||||||| |||||||||||| Sbjct: 148170 gcagccacagcagcaacaacaaca 148147
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091D16 Length = 174222 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 609 ctcgcagccacagccgcaacaaca 632 ||||||||||||||| |||||||| Sbjct: 60877 ctcgcagccacagccacaacaaca 60900
>dbj|AB025604.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15 Length = 75125 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cagcagcaggctgcacaacg 569 |||||||||||||||||||| Sbjct: 33618 cagcagcaggctgcacaacg 33637
>emb|Y17722.1|ATH17722 Arabidopsis thaliana trp1 gene Length = 4058 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cagcagcaggctgcacaacg 569 |||||||||||||||||||| Sbjct: 2940 cagcagcaggctgcacaacg 2959
>dbj|AK072853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135L10, full insert sequence Length = 1523 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 aacatcagcagcaggctgca 564 |||||||||||||||||||| Sbjct: 435 aacatcagcagcaggctgca 416
>emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in linkage group 10, complete sequence Length = 202134 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gaatgactgagaggattgag 154 |||||||||||||||||||| Sbjct: 17570 gaatgactgagaggattgag 17551
>dbj|AK061008.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A08, full insert sequence Length = 1478 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 aacatcagcagcaggctgca 564 |||||||||||||||||||| Sbjct: 391 aacatcagcagcaggctgca 372
>emb|AL953841.5| Zebrafish DNA sequence from clone DKEY-44G23 in linkage group 22, complete sequence Length = 219929 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aatagtacataaacagagct 60 |||||||||||||||||||| Sbjct: 44647 aatagtacataaacagagct 44666
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tgtcgagcttctctgccttc 332 |||||||||||||||||||| Sbjct: 127622 tgtcgagcttctctgccttc 127603
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 aacatcagcagcaggctgca 564 |||||||||||||||||||| Sbjct: 12606680 aacatcagcagcaggctgca 12606699
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 caacatcagcagcaggctgc 563 |||||||||||||||||||| Sbjct: 10119580 caacatcagcagcaggctgc 10119561
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 608 gctcgcagccacagccgcaa 627 |||||||||||||||||||| Sbjct: 345679 gctcgcagccacagccgcaa 345660
>emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, complete sequence Length = 193193 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gagaagccacaatactgacc 89 |||||||||||||||||||| Sbjct: 181122 gagaagccacaatactgacc 181141
>gb|DQ138886.1| Drosophila simulans strain Ky-b CG5669 gene, partial cds Length = 2862 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 611 cgcagccacagccgcaacaacaacaggt 638 ||||| |||||| ||||||||||||||| Sbjct: 1199 cgcaggcacagcagcaacaacaacaggt 1226
>gb|DQ138885.1| Drosophila simulans strain Ky-a CG5669 gene, partial cds Length = 2868 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 611 cgcagccacagccgcaacaacaacaggt 638 ||||| |||||| ||||||||||||||| Sbjct: 1199 cgcaggcacagcagcaacaacaacaggt 1226 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,831,393 Number of Sequences: 3902068 Number of extensions: 5831393 Number of successful extensions: 99668 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99202 Number of HSP's gapped (non-prelim): 444 length of query: 649 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 626 effective length of database: 17,143,297,704 effective search space: 10731704362704 effective search space used: 10731704362704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
