ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13p12 |
|---|---|
| Clone Library Name | barley_pub |
>RBM5_HUMAN (P52756) RNA-binding protein 5 (RNA-binding motif protein 5)| (Putative tumor suppressor LUCA15) (G15 protein) (NY-REN-9 antigen) Length = 815 Score = 75.5 bits (184), Expect = 2e-13 Identities = 53/150 (35%), Positives = 72/150 (48%) Frame = -1 Query: 647 QSQYRDRAAERRSLYGSSSSLANDGLDTTGEYSSRKGSSEMGSMPFPPGVGERSVGEIDN 468 + +YRDRAAERR YG +P PP + + Sbjct: 698 EMKYRDRAAERREKYG---------------------------IPEPPEPKRKKQFDA-G 729 Query: 467 TENYEVITADRAIDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQ 288 T NYE T D ID +N+GN++L+ MGW+EG GLG+ GI P++A+ AGLG++ Sbjct: 730 TVNYEQPTKD-GIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAKG 788 Query: 287 KRADPSLEARAGDSYKTIIQKKAIARFREM 198 S DSYK ++K ARF EM Sbjct: 789 SAYGLS----GADSYKDAVRKAMFARFTEM 814
>RBM10_RAT (P70501) RNA-binding protein 10 (RNA-binding motif protein 10) (S1-1| protein) Length = 852 Score = 68.9 bits (167), Expect = 2e-11 Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 1/150 (0%) Frame = -1 Query: 647 QSQYRDRAAERRSLYGSSSSLANDGLDTTGEYSSRKGSSEMGSMPFPPGVGERSVGEIDN 468 Q +YRDRAAERR YG +P PP R G I Sbjct: 733 QMKYRDRAAERREKYG---------------------------IPEPPEPKRRKYGGIST 765 Query: 467 TE-NYEVITADRAIDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQ 291 ++E T D + +N+G+R+L+ MGW+EG GLG+ GI P++A+ +GLG++ Sbjct: 766 ASVDFEQPTRD-GLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGAR 824 Query: 290 QKRADPSLEARAGDSYKTIIQKKAIARFRE 201 S + +SYK + K + RF E Sbjct: 825 ----GSSYGVTSTESYKETLHKTMVTRFNE 850
>RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif protein 10)| (DXS8237E) Length = 929 Score = 68.9 bits (167), Expect = 2e-11 Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 1/150 (0%) Frame = -1 Query: 647 QSQYRDRAAERRSLYGSSSSLANDGLDTTGEYSSRKGSSEMGSMPFPPGVGERSVGEIDN 468 Q +YRDRAAERR YG +P PP R G I Sbjct: 810 QMKYRDRAAERREKYG---------------------------IPEPPEPKRRKYGGIST 842 Query: 467 TE-NYEVITADRAIDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQ 291 ++E T D + +N+G+R+L+ MGW+EG GLG+ GI P++A+ +GLG++ Sbjct: 843 ASVDFEQPTRD-GLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGAR 901 Query: 290 QKRADPSLEARAGDSYKTIIQKKAIARFRE 201 S + +SYK + K + RF E Sbjct: 902 ----GSSYGVTSTESYKETLHKTMVTRFNE 927
>GPTC2_HUMAN (Q9NW75) G patch domain-containing protein 2| Length = 528 Score = 59.7 bits (143), Expect = 9e-09 Identities = 26/43 (60%), Positives = 31/43 (72%) Frame = -1 Query: 425 ENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 ENN+GNR+L+NMGW G GLG+DG GI EP+QA GLG Sbjct: 467 ENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 509
>GPTC2_MOUSE (Q7TQC7) G patch domain-containing protein 2| Length = 527 Score = 57.4 bits (137), Expect = 5e-08 Identities = 27/55 (49%), Positives = 36/55 (65%) Frame = -1 Query: 425 ENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRADPSLEA 261 E+N+GNR+L++MGW G GLG+DG GI EPVQA GLG ++ P+ A Sbjct: 466 ESNIGNRMLQSMGWTPGSGLGRDGRGIAEPVQAVQRPKGLGLGFPLPKSSPTSPA 520
>NKRF_MOUSE (Q8BY02) NF-kappa-B-repressing factor (NFKB-repressing factor)| (Transcription factor NRF) Length = 690 Score = 55.1 bits (131), Expect = 2e-07 Identities = 26/52 (50%), Positives = 34/52 (65%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRAD 276 I E+N+GN++LR MGW G GLGK G GI+EP+ K R GLG +R + Sbjct: 549 IKEDNIGNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLGLDVERVN 599
>NKRF_HUMAN (O15226) NF-kappa-B-repressing factor (NFKB-repressing factor)| (Transcription factor NRF) (ITBA4 protein) Length = 690 Score = 55.1 bits (131), Expect = 2e-07 Identities = 26/52 (50%), Positives = 34/52 (65%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRAD 276 I E+N+GN++LR MGW G GLGK G GI+EP+ K R GLG +R + Sbjct: 549 IKEDNIGNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLGLDVERVN 599
>AGGF1_HUMAN (Q8N302) Angiogenic factor with G patch and FHA domains 1| (Angiogenic factor VG5Q) (Vasculogenesis gene on 5q) (hVG5Q) Length = 714 Score = 52.0 bits (123), Expect = 2e-06 Identities = 22/46 (47%), Positives = 32/46 (69%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGS 294 I ++N G ++L MGW++G GLGKDG G+K P+Q + AGLG+ Sbjct: 617 ITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTHAGLGT 662
>AGGF1_MOUSE (Q7TN31) Angiogenic factor with G patch and FHA domains 1| (Angiogenic factor VG5Q) (mVG5Q) Length = 711 Score = 51.6 bits (122), Expect = 3e-06 Identities = 22/46 (47%), Positives = 31/46 (67%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGS 294 I ++N G ++L MGW+ G GLGKDG G+K P+Q + AGLG+ Sbjct: 614 ITDSNKGRKMLEKMGWKRGEGLGKDGGGMKTPIQLQLRRTHAGLGT 659
>SFR14_HUMAN (Q8IX01) Putative splicing factor, arginine/serine-rich 14| (Arginine/serine-rich splicing factor 14) Length = 1082 Score = 46.2 bits (108), Expect = 1e-04 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = -1 Query: 443 ADRAIDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGS 294 A + + + N+G ++L+ MGW+EG GLG G GI+EPV GLG+ Sbjct: 1005 AQQKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGA 1054
>SF04_HUMAN (Q8IWZ8) Splicing factor 4 (RNA-binding protein RBP)| Length = 645 Score = 45.8 bits (107), Expect = 1e-04 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Frame = -1 Query: 419 NVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDV-RAGLGSQQKRADPSLEARAGDSY 243 N+G ++L MGW+EG GLG +G GIK PV V AG G + P+ ++ D Y Sbjct: 564 NIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGAGFGIDR----PAELSKEDDEY 619 Query: 242 KTIIQKKAIA-RFR 204 + ++ +A RFR Sbjct: 620 EAFRKRMMLAYRFR 633
>SFR14_MOUSE (Q8CH09) Putative splicing factor, arginine/serine-rich 14| (Arginine/serine-rich splicing factor 14) Length = 1067 Score = 45.4 bits (106), Expect = 2e-04 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = -1 Query: 443 ADRAIDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGS 294 + + + + NVG ++L+ MGW+EG GLG G GI+EPV GLG+ Sbjct: 990 SQQKLTDKNVGFQMLQKMGWKEGHGLGSLGKGIREPVSVGALSEGEGLGA 1039
>SF04_RAT (Q68FU8) Splicing factor 4| Length = 644 Score = 45.1 bits (105), Expect = 2e-04 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Frame = -1 Query: 419 NVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDV-RAGLGSQQKRADPSLEARAGDSY 243 N+G ++L MGW+EG GLG +G GIK PV + AG G + P+ ++ D Y Sbjct: 563 NIGYQMLMKMGWKEGEGLGTEGQGIKNPVNKGATTIDGAGFGIDR----PAELSKEDDEY 618 Query: 242 KTIIQKKAIA-RFR 204 + ++ +A RFR Sbjct: 619 EAFRKRMMLAYRFR 632
>SF04_MOUSE (Q8CH02) Splicing factor 4| Length = 643 Score = 45.1 bits (105), Expect = 2e-04 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Frame = -1 Query: 419 NVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDV-RAGLGSQQKRADPSLEARAGDSY 243 N+G ++L MGW+EG GLG +G GIK PV + AG G + P+ ++ D Y Sbjct: 562 NIGYQMLMKMGWKEGEGLGTEGQGIKNPVNKGATTIDGAGFGIDR----PAELSKEDDEY 617 Query: 242 KTIIQKKAIA-RFR 204 + ++ +A RFR Sbjct: 618 EAFRKRMMLAYRFR 631
>DR111_ARATH (P42698) DNA-damage-repair/toleration protein DRT111, chloroplast| precursor Length = 387 Score = 44.7 bits (104), Expect = 3e-04 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 4/129 (3%) Frame = -1 Query: 674 KRRFSEAPGQSQYRD-RAAERRSLYGSSSSLANDGLDTTGEYSSRKGSSEMGSMPFPPGV 498 KR + + + RD R E R + L+ +GE + ++ ++ G G Sbjct: 127 KREMDKRRQEDEERDKREREEREKERERDNSDPSRLNISGEEAWKRRAAMSGGGSGGKGR 186 Query: 497 GERSVGEIDNTENYEVITADRAID---ENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQA 327 G +D + T+ + + R++ MGW++G GLGK GI P+ A Sbjct: 187 SSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQGLGKSEQGITTPLMA 246 Query: 326 KPGDVRAGL 300 K D RAG+ Sbjct: 247 KKTDRRAGV 255
>SPP2_USTMA (Q4P9X4) Pre-mRNA-splicing factor SPP2| Length = 417 Score = 42.7 bits (99), Expect = 0.001 Identities = 20/69 (28%), Positives = 35/69 (50%) Frame = -1 Query: 479 EIDNTENYEVITADRAIDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGL 300 +ID+ + A + G +LR MGW+EG+G GK G G ++ + + GL Sbjct: 209 DIDSRPEAPTLDDYAATPIDQFGMALLRGMGWKEGMGAGKGGKGPQQAAEPRKRAALLGL 268 Query: 299 GSQQKRADP 273 G++++ P Sbjct: 269 GAKERPTGP 277
>SF04_ARATH (Q94C11) Splicing factor 4-like protein (SF4-like protein)| Length = 443 Score = 42.4 bits (98), Expect = 0.002 Identities = 18/41 (43%), Positives = 28/41 (68%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVR 309 I +NVG+++L MGW+EG G+G G+ +P+ A GDV+ Sbjct: 358 IQADNVGHKLLSKMGWKEGEGIGSSRKGMADPIMA--GDVK 396
>YNW4_YEAST (P53866) Hypothetical 86.9 kDa protein in URE2-SSU72 intergenic| region Length = 767 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGS-GIKEPVQAKPGDVRAGL 300 I N+G R+L +GW+ G GLG G+ GI EP+ AK R+GL Sbjct: 718 IGNENIGRRMLEKLGWKSGEGLGIQGNKGISEPIFAKIKKNRSGL 762
>PINX1_MOUSE (Q9CZX5) Pin2-interacting protein X1 (TRF1-interacting protein 1)| (Liver-related putative tumor suppressor) (LPTS1) (67-11-3 protein) Length = 332 Score = 39.7 bits (91), Expect = 0.010 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = -1 Query: 428 DENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRAD 276 D++ G ++L MGW +G GLG G E ++ K + GLG+ D Sbjct: 25 DDSKFGQKMLEKMGWSKGKGLGAQEQGATEHIKVKVKNNHLGLGATNNNED 75
>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding| protein) (NRE-binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1) Length = 2426 Score = 39.3 bits (90), Expect = 0.013 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = -1 Query: 416 VGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRA 279 +G ++R MGW+EG GLGK+ G KEP+ R GL + +RA Sbjct: 2308 MGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRKGLVAVGERA 2353
>SON_MOUSE (Q9QX47) SON protein| Length = 2404 Score = 39.3 bits (90), Expect = 0.013 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = -1 Query: 416 VGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRA 279 +G ++R MGW+EG GLGK+ G KEP+ R GL + +RA Sbjct: 2286 MGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRKGLVAVGERA 2331
>VPK9_HUMAN (P63124) HERV-K_5q13.3 provirus ancestral Pro protein (EC 3.4.23.-)| (HERV-K104 Pro protein) (Protease) (Proteinase) (PR) Length = 156 Score = 38.5 bits (88), Expect = 0.023 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -1 Query: 407 RILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 +I+ MG+ G GLGK+ GIK PV+AK R G+G Sbjct: 117 KIMTKMGYIPGKGLGKNEDGIKVPVEAKINQKREGIG 153
>VPK5_HUMAN (P63121) HERV-K_19p13.11 provirus ancestral Pro protein (EC| 3.4.23.-) (HERV-K113 envelope protein) (Protease) (Proteinase) (PR) Length = 156 Score = 38.5 bits (88), Expect = 0.023 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -1 Query: 407 RILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 +I+ MG+ G GLGK+ GIK PV+AK R G+G Sbjct: 117 KIMTKMGYIPGKGLGKNEDGIKVPVEAKINQEREGIG 153
>VPK2_HUMAN (Q9Y6I0) HERV-K_7p22.1 provirus ancestral Pro protein (EC 3.4.23.-)| (HERV-K(HML-2.HOM) Pro protein) (HERV-K108 Pro protein) (HERV-K(C7) Pro protein) (Protease) (Proteinase) (PR) Length = 156 Score = 38.5 bits (88), Expect = 0.023 Identities = 18/38 (47%), Positives = 25/38 (65%) Frame = -1 Query: 407 RILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGS 294 +I+ MG+ G GLGK+ GIK PV+AK R G+G+ Sbjct: 117 KIMTKMGYIPGKGLGKNEDGIKIPVEAKINQEREGIGN 154
>VPK1_HUMAN (P63119) HERV-K_12q14.1 provirus ancestral Pro protein (EC| 3.4.23.-) (Protease) (Proteinase) (PR) Length = 156 Score = 38.5 bits (88), Expect = 0.023 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -1 Query: 407 RILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 +I+ MG+ G GLGK+ GIK PV+AK R G+G Sbjct: 117 KIMTKMGYIPGKGLGKNEDGIKVPVEAKINQKREGIG 153
>VPK12_HUMAN (P63131) HERV-K_1q22 provirus ancestral Pro protein (EC 3.4.23.-)| (HERV-K102 Pro protein) (HERV-K(III) Pro protein) (Protease) (Proteinase) (PR) Length = 156 Score = 38.5 bits (88), Expect = 0.023 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -1 Query: 407 RILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 +I+ MG+ G GLGK+ GIK PV+AK R G+G Sbjct: 117 KIMTKMGYIPGKGLGKNEDGIKVPVEAKINQEREGIG 153
>VPK10_HUMAN (P10265) HERV-K_5q33.3 provirus ancestral Pro protein (EC 3.4.23.-)| (HERV-K10 Pro protein) (HERV-K107 Pro protein) (Protease) (Proteinase) (PR) Length = 156 Score = 38.5 bits (88), Expect = 0.023 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -1 Query: 407 RILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 +I+ MG+ G GLGK+ GIK PV+AK R G+G Sbjct: 117 KIMTKMGYIPGKGLGKNEDGIKVPVEAKINQEREGIG 153
>VPK17_HUMAN (P63125) HERV-K_11q22.1 provirus ancestral Pro protein (EC| 3.4.23.-) (Protease) (Proteinase) (PR) Length = 156 Score = 38.1 bits (87), Expect = 0.030 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -1 Query: 407 RILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 +I+ MG+ G GLGK+ GIK PV+AK R G+G Sbjct: 117 KIMTKMGYIPGKGLGKNEDGIKIPVEAKINQKREGIG 153
>TFP11_MOUSE (Q9ERA6) Tuftelin-interacting protein 11 (Tuftelin-interacting| protein 39) Length = 838 Score = 37.7 bits (86), Expect = 0.039 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Frame = -1 Query: 416 VGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQ-QKRADPSLE 264 +G ++L+ MG+ G GLGK+ GI P++AK + +G+ +R SL+ Sbjct: 153 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYGSERTTQSLQ 204
>TFP11_HUMAN (Q9UBB9) Tuftelin-interacting protein 11| Length = 837 Score = 37.4 bits (85), Expect = 0.050 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = -1 Query: 416 VGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGS 294 +G ++L+ MG+ G GLGK+ GI P++AK + +G+ Sbjct: 152 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGA 192
>TB182_MOUSE (P58871) 182 kDa tankyrase 1-binding protein (Fragment)| Length = 909 Score = 37.4 bits (85), Expect = 0.050 Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 6/156 (3%) Frame = -1 Query: 698 SPGVSGSAKRRFSEAPGQSQY-RDRAAERRSLYGSSSSLANDGLDTTGEYSSRKGSSEMG 522 S GV+ ++ FS PG+ + RD E + ND + G SRK G Sbjct: 273 SLGVAAQSEAAFS--PGRQDWSRDVCVEASESSYQFGIIGNDRVSGAGLSPSRKSG---G 327 Query: 521 SMPFPPGVGERSVGEIDNTE-----NYEVITADRAIDENNVGNRILRNMGWQEGLGLGKD 357 PPG E G +D T+ N EV + + + ++ MGW + LGL + Sbjct: 328 GHFVPPG--ETKAGAVDWTDQLGLRNLEVSSCVSSEGPSEARENVVGQMGWSDSLGL--N 383 Query: 356 GSGIKEPVQAKPGDVRAGLGSQQKRADPSLEARAGD 249 + + + LG +K S+EAR D Sbjct: 384 NGDLARRLGTGESEEPRSLGVGEKDWTSSVEARNRD 419
>VPK3_HUMAN (P63120) HERV-K_19q12 provirus ancestral Pro protein (EC 3.4.23.-)| (HERV-K(C19) Pro protein) (Protease) (Proteinase) (PR) Length = 156 Score = 37.4 bits (85), Expect = 0.050 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -1 Query: 407 RILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 +I+ MG+ G GLGK+ GIK PV+AK R G+G Sbjct: 117 KIMTKMGYILGKGLGKNEDGIKIPVEAKINQKREGIG 153
>BAT4_CAEEL (Q09655) Protein BAT4 homolog| Length = 371 Score = 37.0 bits (84), Expect = 0.066 Identities = 17/48 (35%), Positives = 29/48 (60%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQ 288 I +N+G R++ GW E GLG++ G + P++ RAGLG+++ Sbjct: 261 IGPSNIGYRLMCASGWTEEQGLGRNSDGQRFPIRTILKRNRAGLGAEK 308
>PINX1_HUMAN (Q96BK5) Pin2-interacting protein X1 (TRF1-interacting protein 1)| (Liver-related putative tumor suppressor) (67-11-3 protein) Length = 328 Score = 37.0 bits (84), Expect = 0.066 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -1 Query: 428 DENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRAD 276 D++ G R+L MGW +G GLG G + ++ + + GLG+ D Sbjct: 25 DDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNNHLGLGATINNED 75
>VPK7_HUMAN (P63123) HERV-K_1q23.3 provirus ancestral Pro protein (EC 3.4.23.-)| (HERV-K18 Pro protein) (HERV-K110 Pro protein) (HERV-K(C1a) Pro protein) (Protease) (Proteinase) (PR) Length = 156 Score = 36.6 bits (83), Expect = 0.086 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = -1 Query: 416 VGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 + +I+ MG+ G GLGK+ GIK P++AK R G G Sbjct: 114 MSQKIMTKMGYIPGKGLGKNEDGIKVPIEAKINHGREGTG 153
>VPK11_HUMAN (P63129) HERV-K_22q11.21 provirus ancestral Pro protein (EC| 3.4.23.-) (HERV-K101 envelope protein) (Protease) (Proteinase) (PR) Length = 156 Score = 36.2 bits (82), Expect = 0.11 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = -1 Query: 407 RILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 +I+ MG+ G GLGK+ GIK P +AK R G+G Sbjct: 117 KIMTKMGYIPGKGLGKNEDGIKIPFEAKINQKREGIG 153
>SYL_SYNPX (Q7U6T1) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 857 Score = 35.0 bits (79), Expect = 0.25 Identities = 28/89 (31%), Positives = 41/89 (46%) Frame = -1 Query: 581 NDGLDTTGEYSSRKGSSEMGSMPFPPGVGERSVGEIDNTENYEVITADRAIDENNVGNRI 402 ++GLD T E KG + P+P G + + NY VIT A + G+ + Sbjct: 20 SEGLDVTPEPEDGKGFYALSMFPYPSG-----TLHMGHVRNY-VITDVIARVQRMRGHSV 73 Query: 401 LRNMGWQEGLGLGKDGSGIKEPVQAKPGD 315 L MGW + GL + + I+ V PGD Sbjct: 74 LHPMGW-DAFGLPAENAAIERNVD--PGD 99
>VPK6_HUMAN (P63122) HERV-K_8p23.1 provirus ancestral Pro protein (EC 3.4.23.-)| (HERV-K115 Pro protein) (Protease) (Proteinase) (PR) Length = 156 Score = 33.9 bits (76), Expect = 0.56 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -1 Query: 407 RILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 +I+ G+ G GLGK+ GIK P +AK R G+G Sbjct: 117 KIMTKRGYIPGKGLGKNEDGIKIPFEAKINQKREGIG 153
>VPK4_HUMAN (P63127) HERV-K_6q14.1 provirus ancestral Pro protein (EC 3.4.23.-)| (HERV-K109 Pro protein) (HERV-K(C6) Pro protein) (Protease) (Proteinase) (PR) Length = 156 Score = 33.9 bits (76), Expect = 0.56 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -1 Query: 407 RILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 +I+ G+ G GLGK+ GIK P +AK R G+G Sbjct: 117 KIMTKRGYIPGKGLGKNEDGIKIPFEAKINQKREGIG 153
>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 33.9 bits (76), Expect = 0.56 Identities = 37/141 (26%), Positives = 53/141 (37%), Gaps = 12/141 (8%) Frame = +1 Query: 298 PRPALTSPGLACTGSLM----PLPSFPRPSPSCQPMLRRIRLPTLFSSIALSAVITS*FS 465 P P TSP L T P P+ P+P+ +PTL + SAV T + Sbjct: 530 PTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTPTPN 589 Query: 466 VLSISPTERSP-------TPGGNGIDPISLEPFRDEYSPVVSSP-SLASDEDDPYRLRLS 621 S + E SP T GG P+ P ++ S V + ++ S LR S Sbjct: 590 ATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLRPS 649 Query: 622 AARSLYCDCPGASENRRLALP 684 + P S+N +P Sbjct: 650 SISETL--SPSTSDNSTSHMP 668 Score = 31.2 bits (69), Expect = 3.6 Identities = 22/67 (32%), Positives = 30/67 (44%) Frame = +1 Query: 304 PALTSPGLACTGSLMPLPSFPRPSPSCQPMLRRIRLPTLFSSIALSAVITS*FSVLSISP 483 P +TSP A T P P+ P+P+ PTL + SAV T + S +P Sbjct: 504 PDMTSPTSAVT---TPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTP 560 Query: 484 TERSPTP 504 +PTP Sbjct: 561 AVTTPTP 567
>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 33.9 bits (76), Expect = 0.56 Identities = 37/141 (26%), Positives = 53/141 (37%), Gaps = 12/141 (8%) Frame = +1 Query: 298 PRPALTSPGLACTGSLM----PLPSFPRPSPSCQPMLRRIRLPTLFSSIALSAVITS*FS 465 P P TSP L T P P+ P+P+ +PTL + SAV T + Sbjct: 530 PTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTPTPN 589 Query: 466 VLSISPTERSP-------TPGGNGIDPISLEPFRDEYSPVVSSP-SLASDEDDPYRLRLS 621 S + E SP T GG P+ P ++ S V + ++ S LR S Sbjct: 590 ATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLRPS 649 Query: 622 AARSLYCDCPGASENRRLALP 684 + P S+N +P Sbjct: 650 SISETL--SPSTSDNSTSHMP 668 Score = 31.2 bits (69), Expect = 3.6 Identities = 22/67 (32%), Positives = 30/67 (44%) Frame = +1 Query: 304 PALTSPGLACTGSLMPLPSFPRPSPSCQPMLRRIRLPTLFSSIALSAVITS*FSVLSISP 483 P +TSP A T P P+ P+P+ PTL + SAV T + S +P Sbjct: 504 PDMTSPTSAVT---TPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTP 560 Query: 484 TERSPTP 504 +PTP Sbjct: 561 AVTTPTP 567
>GPTC3_MOUSE (Q8BIY1) G patch domain-containing protein 3| Length = 525 Score = 33.1 bits (74), Expect = 0.95 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = -1 Query: 416 VGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRA--GLGSQQKRADP 273 +G +++ GW EG GLG SG+ E + R GLG ++ P Sbjct: 414 IGRKVMERQGWAEGQGLGSRCSGVPEALDGDGQHPRCKRGLGYHGEKLQP 463
>ZGPAT_HUMAN (Q8N5A5) Zinc finger CCCH-type with G patch domain protein (Zinc| finger CCCH-type domain-containing protein 9) Length = 531 Score = 33.1 bits (74), Expect = 0.95 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQA 327 + +G+R+L MG++ G GLG+ G EP+ A Sbjct: 331 VHTRGIGSRLLTKMGYEFGKGLGRHAEGRVEPIHA 365
>YAB4_SCHPO (Q09806) Hypothetical protein C2G11.04 in chromosome I| Length = 301 Score = 33.1 bits (74), Expect = 0.95 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -1 Query: 425 ENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAK 324 + NV ++L+ GW+EG GLG+ GI P+ + Sbjct: 252 KENVALKMLQRCGWKEGQGLGQHNQGIINPLHVE 285
>YG5W_YEAST (P53335) Hypothetical 31.3 kDa protein in TAF145-YOR1 intergenic| region Length = 271 Score = 33.1 bits (74), Expect = 0.95 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = -1 Query: 428 DENNVGNRILRNMGWQEGLGLG-----KDGSGIKEPVQAKPGDVRAGLGSQQKRADPSLE 264 D + G++ L GW+ G+GLG + S IK ++ D GLG++ KR D E Sbjct: 24 DTSRFGHQFLEKFGWKPGMGLGLSPMNSNTSHIKVSIK----DDNVGLGAKLKRKDKKDE 79 Query: 263 ARAGD 249 G+ Sbjct: 80 FDNGE 84
>SPP2_ASPFU (Q4WP02) Pre-mRNA-splicing factor spp2| Length = 541 Score = 33.1 bits (74), Expect = 0.95 Identities = 45/188 (23%), Positives = 70/188 (37%), Gaps = 25/188 (13%) Frame = -1 Query: 707 SYASPGVSGSAKRRFSEAPGQSQ-YRDRAAERRSLYGSSSSLANDGLDTTGEYSSRKGSS 531 S+A P K PG+ Q +D + + L D + KG + Sbjct: 158 SFAKPSQGEETK------PGEDQAMKDAGPLKPQVVDERKPLTQDEIALQALIRESKGET 211 Query: 530 EMGSMPFPPGVGERSVGE-----IDNTENYEVITADR----------AIDENNVGNRILR 396 E G +R V E +D T ++ V A R AI G +LR Sbjct: 212 E-GRTDLVIESAKREVDESYPVRLDETGSFRVDVASRPEPATLDQYNAIPVEEFGAALLR 270 Query: 395 NMGWQEG--LGLGKDGSGIKE-------PVQAKPGDVRAGLGSQQKRADPSLEARAGDSY 243 MGW+EG +G GK G+ + + +PG + G+G++ EA G Sbjct: 271 GMGWKEGQSIGRGKYGTSATDYRSQSPRIPERRPGFL--GIGAKDVSGGKGAEAELGAWG 328 Query: 242 KTIIQKKA 219 + ++K A Sbjct: 329 RAAMRKGA 336
>RBM6_HUMAN (P78332) RNA-binding protein 6 (RNA-binding motif protein 6)| (RNA-binding protein DEF-3) (Lung cancer antigen NY-LU-12) (Protein G16) Length = 1123 Score = 32.7 bits (73), Expect = 1.2 Identities = 18/78 (23%), Positives = 42/78 (53%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRADPSLEARAG 252 ID ++ G + + GW++G GLG G+ +A+ G +R G + + + ++ Sbjct: 1049 IDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAE-GRMR---GPSVGASGRTSKRQSN 1104 Query: 251 DSYKTIIQKKAIARFREM 198 ++Y+ +++ AR++E+ Sbjct: 1105 ETYRDAVRRVMFARYKEL 1122
>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2| Length = 991 Score = 32.7 bits (73), Expect = 1.2 Identities = 30/105 (28%), Positives = 41/105 (39%) Frame = -1 Query: 677 AKRRFSEAPGQSQYRDRAAERRSLYGSSSSLANDGLDTTGEYSSRKGSSEMGSMPFPPGV 498 ++ R E GQ D+ + R L A D D YSS K +E +P PP V Sbjct: 829 SRTRVEERDGQYYPDDQHSHGRLL----EHHAWDSGDGWHGYSSDKKLNEGQGLPPPPRV 884 Query: 497 GERSVGEIDNTENYEVITADRAIDENNVGNRILRNMGWQEGLGLG 363 E +V A+D N G+ +R G + GL G Sbjct: 885 SREWAEHSSQLEEQQVPVWHSAVDTNMTGHEHIRWRGAERGLAGG 929
>SKN1_YEAST (P33336) Beta-glucan synthesis-associated protein SKN1| Length = 771 Score = 32.7 bits (73), Expect = 1.2 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Frame = -1 Query: 671 RRFSEAPGQSQYRDRAAERRSLYGSSSSLANDGLDTTGEYSSRKGSSEMGSMP---FPPG 501 R S A QSQ +R ++ GSSSS + L +T Y + S G P FP Sbjct: 193 RHISAAQSQSQNLINEKKRANMTGSSSSAHDSSLSSTNLYMGEQDFSPFGGYPASFFPLT 252 Query: 500 VGERSVGEIDNTENYE 453 + E+ + + N E Sbjct: 253 LDEKEDDDYIHNPNVE 268
>BAT4_DROME (Q9V7A7) Protein BAT4 homolog| Length = 336 Score = 32.7 bits (73), Expect = 1.2 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRA 279 I N G +++ GW + GLG SG PV+ R GLG +Q+ A Sbjct: 238 ISAKNRGLQLMVKQGWDQEHGLGPSQSGRLYPVKTVLRKQRTGLGIEQQSA 288
>GPTC3_HUMAN (Q96I76) G patch domain-containing protein 3| Length = 525 Score = 32.3 bits (72), Expect = 1.6 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -1 Query: 416 VGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRA--GLGSQQKRADP 273 +G +++ GW EG GLG SG+ E + + R GLG ++ P Sbjct: 413 IGRKVMERQGWAEGQGLGCRCSGVPEALDSDGQHPRCKRGLGYHGEKLQP 462
>VPRT_SMRVH (P21407) Protease (EC 3.4.23.-)| Length = 323 Score = 32.3 bits (72), Expect = 1.6 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -1 Query: 395 NMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQ 288 + G+ G GLGK+ GI +P+ P + GLG Q Sbjct: 285 SQGYLPGQGLGKNNQGITQPITITPKKDKTGLGFHQ 320
>KLF3_MOUSE (Q60980) Krueppel-like factor 3 (Basic krueppel-like factor)| (CACCC-box-binding protein BKLF) (TEF-2) Length = 344 Score = 32.0 bits (71), Expect = 2.1 Identities = 24/84 (28%), Positives = 33/84 (39%) Frame = +1 Query: 253 PARASSDGSALFC*LPRPALTSPGLACTGSLMPLPSFPRPSPSCQPMLRRIRLPTLFSSI 432 PA S S F P SPGL+ S P+ + PSP QP + +P + ++ Sbjct: 73 PAAGGSPSSLKF---PSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVPLSMPPVMAAA 129 Query: 433 ALSAVITS*FSVLSISPTERSPTP 504 I S + I P P P Sbjct: 130 LSRHGIRSPGILPVIQPVVVQPVP 153
>ERP_MYCTU (P0A5P4) Exported repetitive protein precursor (Cell surface| protein pirG) (EXP53) Length = 284 Score = 32.0 bits (71), Expect = 2.1 Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 12/115 (10%) Frame = +1 Query: 295 LPRPALTSPGLACTGSLMPLPSFPRPSPS-----CQPMLRRIRLPTLFSSIAL-SAVITS 456 L P LTSPGL G P + P +P+ P P + ++ AL + +TS Sbjct: 94 LTSPGLTSPGLTSPGLTDPALTSPGLTPTLPGSLAAPGTTLAPTPGVGANPALTNPALTS 153 Query: 457 *FSVLS--ISPTERSPTPGGNG----IDPISLEPFRDEYSPVVSSPSLASDEDDP 603 SPT P GG P+ L+P D P++ P+L + P Sbjct: 154 PTGATPGLTSPTGLDPALGGANEIPITTPVGLDPGADGTYPILGDPTLGTIPSSP 208
>ERP_MYCBO (P0A5P5) Exported repetitive protein precursor (Cell surface| protein pirG) (EXP53) Length = 284 Score = 32.0 bits (71), Expect = 2.1 Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 12/115 (10%) Frame = +1 Query: 295 LPRPALTSPGLACTGSLMPLPSFPRPSPS-----CQPMLRRIRLPTLFSSIAL-SAVITS 456 L P LTSPGL G P + P +P+ P P + ++ AL + +TS Sbjct: 94 LTSPGLTSPGLTSPGLTDPALTSPGLTPTLPGSLAAPGTTLAPTPGVGANPALTNPALTS 153 Query: 457 *FSVLS--ISPTERSPTPGGNG----IDPISLEPFRDEYSPVVSSPSLASDEDDP 603 SPT P GG P+ L+P D P++ P+L + P Sbjct: 154 PTGATPGLTSPTGLDPALGGANEIPITTPVGLDPGADGTYPILGDPTLGTIPSSP 208
>Y099_MYCPN (P75593) Very hypothetical adhesin P1-like protein MPN099| (R02_orf347L) Length = 347 Score = 32.0 bits (71), Expect = 2.1 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 4/100 (4%) Frame = -1 Query: 686 SGSAKRRFSEAPGQSQYRDRAAERRSL----YGSSSSLANDGLDTTGEYSSRKGSSEMGS 519 SGS +F + Y D +++ L YG + L N L T ++R S+ + Sbjct: 12 SGSDSNKFQATDQKWSYTDLQSDQTKLNLSAYGEVNGLLNPALVETYFGTTRTSSTANQN 71 Query: 518 MPFPPGVGERSVGEIDNTENYEVITADRAIDENNVGNRIL 399 PG+G + + E +N +IT A +VGN ++ Sbjct: 72 STTVPGIGFK-IPEQNNDSKATLITPGLAWTPQDVGNLVV 110
>NFL_PIG (P02547) Neurofilament triplet L protein (68 kDa neurofilament| protein) (Neurofilament light polypeptide) (NF-L) Length = 548 Score = 31.6 bits (70), Expect = 2.8 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -1 Query: 704 YASPGVSGSAKRRFSEAPGQ--SQYRDRAAERRSLYGSSSSLANDGLDTTGEYSSRKG 537 Y+ P S S KRR+ E P S R + RS Y S S+ + L YSS G Sbjct: 4 YSEPYYSTSYKRRYVETPRVHISSVRSGYSTARSAYSSYSAPVSSSLSVRRSYSSSSG 61
>GAG_IPMA (P11365) Retrovirus-related Gag polyprotein [Contains: Protease (EC| 3.4.23.-)] Length = 827 Score = 31.6 bits (70), Expect = 2.8 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -1 Query: 404 ILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 I+ MG++EG GLG G EP+ R GLG Sbjct: 790 IMAKMGYKEGKGLGHQEQGRIEPISPNGNQDRQGLG 825
>SULF1_DROME (Q9VEX0) Extracellular sulfatase SULF-1 homolog precursor (EC| 3.1.6.-) (DmSulf-1) Length = 1114 Score = 31.6 bits (70), Expect = 2.8 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 5/95 (5%) Frame = -1 Query: 689 VSGSAKRRFSEAPGQSQYRDRAAERRSLYGSSSSLANDGLDTTGE-----YSSRKGSSEM 525 + S +R +E +S+ R + ERR++ ++SSL D L+ GE SS ++ M Sbjct: 417 IESSGRRETAEQIAESRARLQI-ERRNMKLANSSLLEDFLEGAGESTTIVSSSSTAATLM 475 Query: 524 GSMPFPPGVGERSVGEIDNTENYEVITADRAIDEN 420 S P GE V E DN E + + D A+D + Sbjct: 476 SSTAQQPEDGEEEV-ETDNEE--DDVDGDGAMDSS 507
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 31.6 bits (70), Expect = 2.8 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = -1 Query: 704 YASPGVSGSAKRRFSEAPGQSQYRDRAAERRSLYGSSSSLANDGLDTTGEY-SSRKGSSE 528 Y SG ++ + GQS Y + + YG+ S+ G +TG Y SS+ S Sbjct: 33 YGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQST--PQGYGSTGGYGSSQSSQSS 90 Query: 527 MGSMPFPPGVGER 489 G PG G++ Sbjct: 91 YGQQSSYPGYGQQ 103
>TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1 (EC| 2.7.11.1) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230) (TAFII250) (TBP-associated factor 230 kDa) (p230) Length = 2129 Score = 31.6 bits (70), Expect = 2.8 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = -1 Query: 410 NRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRADPSLEARAGDSYK 240 N I R+MG + G +++P PG+V+ G G +K+ DP E ++ + K Sbjct: 1759 NSIHRSMGAEAGSS--HTAPAVRKPAPPGPGEVKRGRGRPRKQRDPVEEVKSQNPVK 1813
>SREP_PENCH (Q92259) GATA factor SREP| Length = 532 Score = 31.2 bits (69), Expect = 3.6 Identities = 23/69 (33%), Positives = 29/69 (42%) Frame = +1 Query: 487 ERSPTPGGNGIDPISLEPFRDEYSPVVSSPSLASDEDDPYRLRLSAARSLYCDCPGASEN 666 ++SPT G +L SP S +LA DD YR S Y PG +E+ Sbjct: 294 DQSPTAG-------TLSSNGSSTSPEASPAALAHGHDDHYRYMSSEPGDHYQMMPGKTED 346 Query: 667 RRLALPETP 693 ALP P Sbjct: 347 APRALPFAP 355
>SPF45_HUMAN (Q96I25) Splicing factor 45 (45 kDa splicing factor) (RNA-binding| motif protein 17) Length = 401 Score = 31.2 bits (69), Expect = 3.6 Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 7/135 (5%) Frame = -1 Query: 686 SGSAKRRFSEAPGQSQYRDRAAERRSLYGSS----SSLANDGLDTTGEYSSRKGS---SE 528 SG A+R ++ Y +R +RS+ G++ +SL + ++ + S S+ Sbjct: 145 SGFARRPDPDSDEDEDY-ERERRKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQ 203 Query: 527 MGSMPFPPGVGERSVGEIDNTENYEVITADRAIDENNVGNRILRNMGWQEGLGLGKDGSG 348 PP V E T A+ V ++I++ G++EG GLGK G Sbjct: 204 SSKAAIPPPVYEEQDRPRSPTGPSNSFLANMG---GTVAHKIMQKYGFREGQGLGKHEQG 260 Query: 347 IKEPVQAKPGDVRAG 303 + + + R G Sbjct: 261 LSTALSVEKTSKRGG 275
>SPP2_EMENI (Q5B4R9) Pre-mRNA-splicing factor spp2| Length = 523 Score = 31.2 bits (69), Expect = 3.6 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -1 Query: 413 GNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRA 306 G +LR MGW+EG +GK G +P +A + A Sbjct: 261 GAALLRGMGWKEGQAVGKGKYGSADPSRASTPHIPA 296
>BAT4_MOUSE (Q61858) Protein BAT4 (HLA-B-associated transcript 4) (G5 protein)| Length = 372 Score = 31.2 bits (69), Expect = 3.6 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 + ++ G R+L GW+ G+GLG G G P+ + GLG Sbjct: 269 VPTSSPGFRLLLRGGWEPGMGLGPRGEGRANPIPTILKRDQEGLG 313
>ZGPAT_MOUSE (Q8VDM1) Zinc finger CCCH-type with G patch domain protein| Length = 511 Score = 31.2 bits (69), Expect = 3.6 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -1 Query: 431 IDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQA 327 + +G+++L MG++ G GLG+ G EP+ A Sbjct: 311 VHTRGIGSKLLVKMGYEFGKGLGRHAEGRVEPIHA 345
>STS5_SCHPO (O74454) Protein sts5| Length = 1066 Score = 31.2 bits (69), Expect = 3.6 Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 9/52 (17%) Frame = +1 Query: 55 ITPRNM-ELARQKGNLTVQMQALGV------LT--LTPMKRVAELIIHDEIK 183 +TPR + E+ + KGNL QM +LG+ LT P++R ++++H +++ Sbjct: 879 VTPRAVYEMQKYKGNLASQMMSLGIEDESDDLTHFTAPLERYGDIVVHYQLQ 930
>DNJB2_HUMAN (P25686) DnaJ homolog subfamily B member 2 (Heat shock 40 kDa| protein 3) (DnaJ protein homolog 1) (HSJ-1) Length = 351 Score = 30.8 bits (68), Expect = 4.7 Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 7/134 (5%) Frame = -1 Query: 632 DRAAERRSLYGSSSSLANDGLDTTGEY----SSRKGSSEMGS--MPFPPGVGE-RSVGEI 474 D AE G S L N G +G + SS G S+ S F PG G RSV Sbjct: 111 DPFAELFDDLGPFSELQNRGSRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTS 170 Query: 473 DNTENYEVITADRAIDENNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGS 294 IT R ++ QE + + +DG + P D+ GL Sbjct: 171 TTFVQGRRITTRRIMENG------------QERVEVEEDGQLKSVTINGVPDDLALGLEL 218 Query: 293 QQKRADPSLEARAG 252 ++ PS+ +R+G Sbjct: 219 SRREQQPSVTSRSG 232
>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor| Length = 317 Score = 30.8 bits (68), Expect = 4.7 Identities = 23/82 (28%), Positives = 36/82 (43%) Frame = -1 Query: 755 THTXSTPFKTDLSXLGSYASPGVSGSAKRRFSEAPGQSQYRDRAAERRSLYGSSSSLAND 576 T + STP + S S +SP S S S++ S +++ S SSS ++ Sbjct: 148 TSSSSTPSSSSSS---SSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSS 204 Query: 575 GLDTTGEYSSRKGSSEMGSMPF 510 ++ SS K SS+ S F Sbjct: 205 SSKSSASPSSSKSSSKFSSSSF 226
>TRPB1_CHLCV (Q822W9) Tryptophan synthase beta chain 1 (EC 4.2.1.20)| Length = 412 Score = 30.4 bits (67), Expect = 6.2 Identities = 13/43 (30%), Positives = 27/43 (62%) Frame = +3 Query: 342 LDATTILSKTQSFLPAHVAQNTIAHIVFVYCSVSSDHLIIFSV 470 L+A +LSKT+ +PA + + +AH++ + S+ D + I ++ Sbjct: 349 LEAFRLLSKTEGIIPALESSHALAHMIKIAPSLDKDTIAIVNL 391
>ACTHR_PIG (Q8HYN8) Adrenocorticotropic hormone receptor (ACTH receptor)| (ACTH-R) (Melanocortin receptor 2) (MC2-R) (Adrenocorticotropin receptor) Length = 297 Score = 30.4 bits (67), Expect = 6.2 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Frame = -1 Query: 272 SLEARAGDSYKTI---IQKKAIARFREMS*VLLFISSCIISSATRFIGVNVKTPKACICT 102 SL A A D Y TI +Q + + R + VLL I +C I S + + P T Sbjct: 120 SLSAIAADRYITIFHALQYQRLVTPRRAAVVLLIIWACCIGSGITIVTFSHHVPAVIAFT 179 Query: 101 VKFP------FCLASSIFL 63 FP CL +FL Sbjct: 180 ALFPLMLVFILCLYGHMFL 198
>TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protein (EC 6.3.2.-)| Length = 4065 Score = 30.4 bits (67), Expect = 6.2 Identities = 21/67 (31%), Positives = 29/67 (43%) Frame = -1 Query: 659 EAPGQSQYRDRAAERRSLYGSSSSLANDGLDTTGEYSSRKGSSEMGSMPFPPGVGERSVG 480 E + Y D + YG S N+ + + E EMG MP PGV E +G Sbjct: 2411 EDDDEDMYDDEQYDDELDYGDDMSQDNED-NPSDEEDDLGEMGEMGGMPGQPGVVEVLMG 2469 Query: 479 EIDNTEN 459 E D+ E+ Sbjct: 2470 ENDDEED 2476
>SWR1_ASHGO (Q759G7) Helicase SWR1 (EC 3.6.1.-)| Length = 1486 Score = 30.4 bits (67), Expect = 6.2 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Frame = -1 Query: 416 VGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRADPSLEARAGDSYKT 237 + R R G +EG L K G++E V+ K D+RA L + P + GD+ KT Sbjct: 78 IRRRQKRGRGEEEGNALLK---GVEELVEQKYADLRARLDRPMLKQGPRKRKQPGDAAKT 134 Query: 236 II------QKKAIAR 210 + +K A+ R Sbjct: 135 ALPHDSKKRKSAVVR 149
>PYRF_HANFA (P79075) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP| decarboxylase) (OMPDCase) (OMPdecase) (Uridine 5'-monophosphate synthase) (UMP synthase) Length = 265 Score = 30.4 bits (67), Expect = 6.2 Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 1/120 (0%) Frame = -1 Query: 593 SSLANDGLDTTGEYSSRKGSSEMGSMPFPPG-VGERSVGEIDNTENYEVITADRAIDENN 417 + L++ G TGEY+ + F G + +R +G D ++ ++T +D+ Sbjct: 152 AELSSKGSLATGEYTKQTVDIAKTDKDFVIGFIAQRDMGGHDEGFDWLIMTPGVGLDD-- 209 Query: 416 VGNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLGSQQKRADPSLEARAGDSYKT 237 +G GLG+ G+ E V + G G K DP++E G+ Y++ Sbjct: 210 ------------KGDGLGQQYRGVDEVVAGGSDIIIVGRGLFGKGRDPAVE---GERYRS 254
>SPF45_MOUSE (Q8JZX4) Splicing factor 45 (45 kDa splicing factor) (RNA-binding| motif protein 17) Length = 405 Score = 30.4 bits (67), Expect = 6.2 Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 10/157 (6%) Frame = -1 Query: 686 SGSAKRRFSEAPGQSQYRDRAAERRSLYGSS----SSLANDGLDTTGEYSSRKGS---SE 528 SG ++R ++ Y +R +RS+ G++ +SL + ++ + S S+ Sbjct: 145 SGFSRRPDPDSDEDEDY-ERERRKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQ 203 Query: 527 MGSMPFPPGVGERSVGEIDNTENYEVITADRAIDENNVGNRILRNMGWQEGLGLGKDGSG 348 PP V E T A+ V ++I++ G++EG GLGK G Sbjct: 204 SSKAAIPPPVYEEPDRPRSPTGPSNSFLANMG---GTVAHKIMQKYGFREGQGLGKHEQG 260 Query: 347 IKEPVQAKPGDVRAG---LGSQQKRADPSLEARAGDS 246 + + + R G +G ++ + ++ DS Sbjct: 261 LSTALSVEKTSKRGGKIIVGDATEKGEAQDASKKSDS 297
>PODJ_CAUCR (Q9ZG88) Localization factor podJL (Polar organelle development| protein) [Contains: Localization factor podJS] Length = 974 Score = 30.4 bits (67), Expect = 6.2 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 3/91 (3%) Frame = +1 Query: 481 PTERSPTPGGNGIDPI--SLEPFRDEYSPVVSSPSLASDEDDPYRLRLSAARSL-YCDCP 651 P ++P P P+ + PF D Y +S S + DE D + + ARS + P Sbjct: 474 PPAQAPAPVATAQRPVPPAASPFEDNYFSQAASFSTSEDEADAFDAPPAPARSFEVAEFP 533 Query: 652 GASENRRLALPETPGEAYDPRXDKSVLXGVE 744 A PE P A+D D ++ G E Sbjct: 534 AAE-------PEEPAFAHD---DYAIADGFE 554
>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)| (Cellular zinc finger anti-NF-kappa B protein) (Zinc finger protein Cezanne) Length = 843 Score = 30.0 bits (66), Expect = 8.1 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +1 Query: 274 GSALFC*LPRPALTSPGLACTGSLMPLPSFPRPSPSCQPMLRRIRLPTL 420 G + C PR L G C G L P +FPR P +P + +P+L Sbjct: 703 GGGVHCQEPRRQLA--GGPCVGGLPPYATFPRQCPPGRPYPHQDSIPSL 749
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)| Length = 907 Score = 30.0 bits (66), Expect = 8.1 Identities = 29/102 (28%), Positives = 36/102 (35%) Frame = +1 Query: 298 PRPALTSPGLACTGSLMPLPSFPRPSPSCQPMLRRIRLPTLFSSIALSAVITS*FSVLSI 477 P P TSP A T P P+ P+P+ PTL + SAV T Sbjct: 516 PTPNATSPTPAVT---TPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTP------- 565 Query: 478 SPTERSPTPGGNGIDPISLEPFRDEYSPVVSSPSLASDEDDP 603 +P SPT G P + SP + S S P Sbjct: 566 TPNATSPTLGKTSPTSAVTTPTPNATSPTLGKTSPTSAVTTP 607
>BAT4_HUMAN (O95872) Protein BAT4 (HLA-B-associated transcript 4) (G5 protein)| Length = 356 Score = 30.0 bits (66), Expect = 8.1 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -1 Query: 413 GNRILRNMGWQEGLGLGKDGSGIKEPVQAKPGDVRAGLG 297 G ++L GW+ G+GLG G G P+ + GLG Sbjct: 259 GFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLG 297 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 111,170,177 Number of Sequences: 219361 Number of extensions: 2538060 Number of successful extensions: 8336 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 7863 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8303 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 7958637276 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
