ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13p11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 1e-97
2dbj|AK064862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 1e-97
3dbj|AK060732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 1e-97
4gb|BT016632.1| Zea mays clone Contig465 mRNA sequence 234 3e-58
5gb|AY106153.1| Zea mays PCO079304 mRNA sequence 234 3e-58
6gb|BT018525.1| Zea mays clone EL01N0432G12.d mRNA sequence 204 3e-49
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 170 4e-39
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 170 4e-39
9emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial se... 170 4e-39
10gb|AF251067.1|AF251067 Oryza sativa branched chain alpha-keto ac... 80 1e-11
11emb|AL021480.1|CEY39E4A Caenorhabditis elegans YAC Y39E4A, compl... 54 6e-04
12gb|AC121233.16| Medicago truncatula clone mth2-14g13, complete s... 54 6e-04
13ref|NM_001038287.1| Caenorhabditis elegans Y39E4A.3a (Transketol... 54 6e-04
14ref|NM_001038288.1| Caenorhabditis elegans Y39E4A.3b (Transketol... 54 6e-04
15ref|XM_756727.1| Ustilago maydis 521 hypothetical protein (UM056... 46 0.15
16ref|NM_111356.3| Arabidopsis thaliana structural constituent of ... 42 2.3
17gb|AY081585.1| Arabidopsis thaliana putative 40S ribosomal prote... 42 2.3
18gb|AY062796.1| Arabidopsis thaliana putative 40S ribosomal prote... 42 2.3
19dbj|AK220818.1| Arabidopsis thaliana mRNA for 40S ribosomal prot... 42 2.3
20emb|BX822077.1|CNS0A7LX Arabidopsis thaliana Full-length cDNA Co... 42 2.3
21emb|BX824488.1|CNS0A5KP Arabidopsis thaliana Full-length cDNA Co... 42 2.3
22gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J... 42 2.3
23gb|AY085787.1| Arabidopsis thaliana clone 18185 mRNA, complete s... 42 2.3
24gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
25gb|AC012297.12| Mus musculus chromosome 7, clone RP23-78H9, comp... 40 9.1
26ref|XM_584132.2| PREDICTED: Bos taurus similar to Sulfonylurea r... 40 9.1
27gb|AY485632.1| Sphaerophorus globosus DNA-dependent RNA polymera... 40 9.1
28emb|CR854931.8| Zebrafish DNA sequence from clone DKEY-30P2 in l... 40 9.1
29emb|CR854933.8| Zebrafish DNA sequence from clone DKEY-48H17 in ... 40 9.1
30emb|AL031433.4|HS171N11 Human DNA sequence from clone RP1-171N11... 40 9.1
31gb|AC091639.5| Homo sapiens chromosome 8, clone RP11-61K18, comp... 40 9.1
32gb|AC093879.3| Homo sapiens BAC clone RP11-650J17 from 4, comple... 40 9.1
33gb|AC090960.3| Homo sapiens chromosome 3 clone RP11-83E7 map 3p,... 40 9.1
34ref|NM_058988.1| Caenorhabditis elegans Y119C1B.10 (Y119C1B.10) ... 40 9.1
35emb|BX548166.7| Zebrafish DNA sequence from clone CH211-280G5 in... 40 9.1
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
37gb|AC025828.3|AC025828 Homo sapiens, clone RP11-13I24, complete ... 40 9.1
38dbj|AK120753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
39dbj|AK070681.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
40gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complet... 40 9.1 
>dbj|AK068933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002N22, full
           insert sequence
          Length = 1157

 Score =  365 bits (184), Expect = 1e-97
 Identities = 444/531 (83%)
 Strand = Plus / Minus

                                                                       
Query: 138 actaaacaggcacatcagccggatactctgcagggtgccttttgatggtatccagcagcg 197
           |||||| | |||||||||| || || |||||||||||| | ||||| ||||||  |||| 
Sbjct: 968 actaaatatgcacatcagctgggtagtctgcagggtgcttcttgattgtatccctcagca 909

                                                                       
Query: 198 accgctcttgctggcgaaggttggaagggatttgatcataaacatctgtgaagagctccg 257
           | ||||||||||  |  ||||||||||| | || |||||||||||| ||||| || || |
Sbjct: 908 atcgctcttgctctcttaggttggaaggaacttcatcataaacatcggtgaatagttcag 849

                                                                       
Query: 258 caagcccgtgttttggcatcctctcggccacctgaatggcttgcaggagctcttgcctca 317
           | |||    |||| ||||| || || |||||||||||||||| ||| |||||||||||||
Sbjct: 848 cgagcggcggtttcggcattctttctgccacctgaatggctttcagaagctcttgcctca 789

                                                                       
Query: 318 cattgttcctgagttgagactcttgagtaccgcaccaccatccattcccctgaacccatt 377
           ||||||||||||||| ||| || |    | | |||||||| |||||||||||||||||||
Sbjct: 788 cattgttcctgagttcagattcatcttcatcacaccaccagccattcccctgaacccatt 729

                                                                       
Query: 378 ttctgtacctggagacgggatcccttgctgttcgccaatgctccatctcatcagccggcc 437
           ||||||||||||| |  ||||| |  ||||||||||| ||||| ||||||||  ||||||
Sbjct: 728 ttctgtacctggaaatcggatctcgcgctgttcgccagtgctcgatctcatcgaccggcc 669

                                                                       
Query: 438 tgtacttggttgaatcgtcggatgtcgagtgatggccgactcggtaggtcatcgcctcga 497
           |||| ||||||||||| ||||||||||||||||||||||| ||||| ||||  ||||| |
Sbjct: 668 tgtatttggttgaatcatcggatgtcgagtgatggccgacccggtaagtcagtgcctcaa 609

                                                                       
Query: 498 ttaaaataggccttccttcagttatagccatttcccgggcggtgtgcactgcactgtaca 557
            |||||| |||||||||||  | ||||||||||||| ||| ||||| |||||||||||||
Sbjct: 608 ctaaaattggccttccttccttgatagccatttccctggctgtgtgaactgcactgtaca 549

                                                                       
Query: 558 cagcaagagtatcgttgccgtctagcctgatactgcgtattccgtaggcctgaccccggn 617
           ||||||||| ||| || || ||||  ||||||||||| ||||| || || ||||| ||| 
Sbjct: 548 cagcaagagcatcatttccatctactctgatactgcgcattccataagcttgaccacgga 489

                                                              
Query: 618 taacaactccgtcacttctgaactgttcggcggttggggtgctgattgccc 668
           ||||| |||| |||||||||||||||||    |||||||||||||||||||
Sbjct: 488 taacagctccatcacttctgaactgttcactagttggggtgctgattgccc 438
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>dbj|AK064862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I03, full
            insert sequence
          Length = 1725

 Score =  365 bits (184), Expect = 1e-97
 Identities = 444/531 (83%)
 Strand = Plus / Minus

                                                                        
Query: 138  actaaacaggcacatcagccggatactctgcagggtgccttttgatggtatccagcagcg 197
            |||||| | |||||||||| || || |||||||||||| | ||||| ||||||  |||| 
Sbjct: 1634 actaaatatgcacatcagctgggtagtctgcagggtgcttcttgattgtatccctcagca 1575

                                                                        
Query: 198  accgctcttgctggcgaaggttggaagggatttgatcataaacatctgtgaagagctccg 257
            | ||||||||||  |  ||||||||||| | || |||||||||||| ||||| || || |
Sbjct: 1574 atcgctcttgctctcttaggttggaaggaacttcatcataaacatcggtgaatagttcag 1515

                                                                        
Query: 258  caagcccgtgttttggcatcctctcggccacctgaatggcttgcaggagctcttgcctca 317
            | |||    |||| ||||| || || |||||||||||||||| ||| |||||||||||||
Sbjct: 1514 cgagcggcggtttcggcattctttctgccacctgaatggctttcagaagctcttgcctca 1455

                                                                        
Query: 318  cattgttcctgagttgagactcttgagtaccgcaccaccatccattcccctgaacccatt 377
            ||||||||||||||| ||| || |    | | |||||||| |||||||||||||||||||
Sbjct: 1454 cattgttcctgagttcagattcatcttcatcacaccaccagccattcccctgaacccatt 1395

                                                                        
Query: 378  ttctgtacctggagacgggatcccttgctgttcgccaatgctccatctcatcagccggcc 437
            ||||||||||||| |  ||||| |  ||||||||||| ||||| ||||||||  ||||||
Sbjct: 1394 ttctgtacctggaaatcggatctcgcgctgttcgccagtgctcgatctcatcgaccggcc 1335

                                                                        
Query: 438  tgtacttggttgaatcgtcggatgtcgagtgatggccgactcggtaggtcatcgcctcga 497
            |||| ||||||||||| ||||||||||||||||||||||| ||||| ||||  ||||| |
Sbjct: 1334 tgtatttggttgaatcatcggatgtcgagtgatggccgacccggtaagtcagtgcctcaa 1275

                                                                        
Query: 498  ttaaaataggccttccttcagttatagccatttcccgggcggtgtgcactgcactgtaca 557
             |||||| |||||||||||  | ||||||||||||| ||| ||||| |||||||||||||
Sbjct: 1274 ctaaaattggccttccttccttgatagccatttccctggctgtgtgaactgcactgtaca 1215

                                                                        
Query: 558  cagcaagagtatcgttgccgtctagcctgatactgcgtattccgtaggcctgaccccggn 617
            ||||||||| ||| || || ||||  ||||||||||| ||||| || || ||||| ||| 
Sbjct: 1214 cagcaagagcatcatttccatctactctgatactgcgcattccataagcttgaccacgga 1155

                                                               
Query: 618  taacaactccgtcacttctgaactgttcggcggttggggtgctgattgccc 668
            ||||| |||| |||||||||||||||||    |||||||||||||||||||
Sbjct: 1154 taacagctccatcacttctgaactgttcactagttggggtgctgattgccc 1104
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>dbj|AK060732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A05, full
            insert sequence
          Length = 1705

 Score =  365 bits (184), Expect = 1e-97
 Identities = 444/531 (83%)
 Strand = Plus / Minus

                                                                        
Query: 138  actaaacaggcacatcagccggatactctgcagggtgccttttgatggtatccagcagcg 197
            |||||| | |||||||||| || || |||||||||||| | ||||| ||||||  |||| 
Sbjct: 1560 actaaatatgcacatcagctgggtagtctgcagggtgcttcttgattgtatccctcagca 1501

                                                                        
Query: 198  accgctcttgctggcgaaggttggaagggatttgatcataaacatctgtgaagagctccg 257
            | ||||||||||  |  ||||||||||| | || |||||||||||| ||||| || || |
Sbjct: 1500 atcgctcttgctctcttaggttggaaggaacttcatcataaacatcggtgaatagttcag 1441

                                                                        
Query: 258  caagcccgtgttttggcatcctctcggccacctgaatggcttgcaggagctcttgcctca 317
            | |||    |||| ||||| || || |||||||||||||||| ||| |||||||||||||
Sbjct: 1440 cgagcggcggtttcggcattctttctgccacctgaatggctttcagaagctcttgcctca 1381

                                                                        
Query: 318  cattgttcctgagttgagactcttgagtaccgcaccaccatccattcccctgaacccatt 377
            ||||||||||||||| ||| || |    | | |||||||| |||||||||||||||||||
Sbjct: 1380 cattgttcctgagttcagattcatcttcatcacaccaccaaccattcccctgaacccatt 1321

                                                                        
Query: 378  ttctgtacctggagacgggatcccttgctgttcgccaatgctccatctcatcagccggcc 437
            ||||||||||||| |  ||||| |  ||||||||||| ||||| ||||||||  ||||||
Sbjct: 1320 ttctgtacctggaaatcggatctcgcgctgttcgccagtgctcgatctcatcgaccggcc 1261

                                                                        
Query: 438  tgtacttggttgaatcgtcggatgtcgagtgatggccgactcggtaggtcatcgcctcga 497
            |||| ||||||||||| ||||||||||||||||||||||| ||||| ||||  ||||| |
Sbjct: 1260 tgtatttggttgaatcatcggatgtcgagtgatggccgacccggtaagtcagtgcctcaa 1201

                                                                        
Query: 498  ttaaaataggccttccttcagttatagccatttcccgggcggtgtgcactgcactgtaca 557
             |||||| |||||||||||  | ||||||||||||| ||| ||||| |||||||||||||
Sbjct: 1200 ctaaaattggccttccttccttgatagccatttccctggctgtgtgaactgcactgtaca 1141

                                                                        
Query: 558  cagcaagagtatcgttgccgtctagcctgatactgcgtattccgtaggcctgaccccggn 617
            ||||||||| ||| || || ||||  ||||||||||| ||||| || || ||||| ||| 
Sbjct: 1140 cagcaagagcatcatttccatctactctgatactgcgcattccataagcttgaccacgga 1081

                                                               
Query: 618  taacaactccgtcacttctgaactgttcggcggttggggtgctgattgccc 668
            ||||| |||| |||||||||||||||||    |||||||||||||||||||
Sbjct: 1080 taacagctccatcacttctgaactgttcactagttggggtgctgattgccc 1030
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>gb|BT016632.1| Zea mays clone Contig465 mRNA sequence
          Length = 1349

 Score =  234 bits (118), Expect = 3e-58
 Identities = 413/509 (81%), Gaps = 2/509 (0%)
 Strand = Plus / Minus

                                                                        
Query: 138  actaaacaggcacatcagccggatactctgcagggtgccttttgatggtatccagcagcg 197
            ||||||| || |||||||  || || ||||||||||||||  |||| |||||| ||||| 
Sbjct: 1241 actaaacgggtacatcagttgggtagtctgcagggtgcctcatgattgtatcccgcagca 1182

                                                                        
Query: 198  accgctcttgctggcgaaggttggaagggatttgatcataaacatctgtgaagagctccg 257
            |  ||||||| |   | |||||||||||||| | ||| |||||||| ||||| ||||| |
Sbjct: 1181 attgctcttgttcatgcaggttggaagggatcttatcgtaaacatcagtgaaaagctcag 1122

                                                                        
Query: 258  caagcccgtg-ttttggcatcctctcggccacctgaatggcttgcaggagctcttgcctc 316
             || |  ||| ||||||||| || || || ||||| |||||||| || |||||||  |||
Sbjct: 1121 taa-ctggtggttttggcattctttctgcaacctggatggcttggagaagctcttttctc 1063

                                                                        
Query: 317  acattgttcctgagttgagactcttgagtaccgcaccaccatccattcccctgaacccat 376
            ||  || ||||||| | ||| |||| || | |  |||||||  |||| ||||||||||||
Sbjct: 1062 actctgctcctgaggtcagattcttcagcatcagaccaccagtcattaccctgaacccat 1003

                                                                        
Query: 377  tttctgtacctggagacgggatcccttgctgttcgccaatgctccatctcatcagccggc 436
            |||||||| ||||| |  |||||||| ||||||||||||||||| ||||||||| | |||
Sbjct: 1002 tttctgtatctggaaattggatccctcgctgttcgccaatgctcaatctcatcaactggc 943

                                                                        
Query: 437  ctgtacttggttgaatcgtcggatgtcgagtgatggccgactcggtaggtcatcgcctcg 496
            ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||  ||||| 
Sbjct: 942  ctgtacttggtcgaatcatcggatgtcgagtgatggccgactcggtaagtcagtgcctca 883

                                                                        
Query: 497  attaaaataggccttccttcagttatagccatttcccgggcggtgtgcactgcactgtac 556
            | |||||| || ||||||||||||| ||||||||| ||||| |  || | ||| ||||||
Sbjct: 882  actaaaattggtcttccttcagttacagccatttctcgggcagcatggattgcgctgtac 823

                                                                        
Query: 557  acagcaagagtatcgttgccgtctagcctgatactgcgtattccgtaggcctgaccccgg 616
            |||||||||| ||| ||||| ||||  | ||| |  || || || || ||||| || |||
Sbjct: 822  acagcaagagcatcattgccatctactcggatgccacggatcccataagcctggccacgg 763

                                         
Query: 617  ntaacaactccgtcacttctgaactgttc 645
             | |||||||| ||||||||||| |||||
Sbjct: 762  atgacaactccatcacttctgaattgttc 734
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>gb|AY106153.1| Zea mays PCO079304 mRNA sequence
          Length = 1709

 Score =  234 bits (118), Expect = 3e-58
 Identities = 413/509 (81%), Gaps = 2/509 (0%)
 Strand = Plus / Minus

                                                                        
Query: 138  actaaacaggcacatcagccggatactctgcagggtgccttttgatggtatccagcagcg 197
            ||||||| || |||||||  || || ||||||||||||||  |||| |||||| ||||| 
Sbjct: 1587 actaaacgggtacatcagttgggtagtctgcagggtgcctcatgattgtatcccgcagca 1528

                                                                        
Query: 198  accgctcttgctggcgaaggttggaagggatttgatcataaacatctgtgaagagctccg 257
            |  ||||||| |   | |||||||||||||| |  || |||||||| ||||| ||||| |
Sbjct: 1527 attgctcttgttcatgcaggttggaagggatcttgtcgtaaacatcagtgaaaagctcag 1468

                                                                        
Query: 258  caagcccgtg-ttttggcatcctctcggccacctgaatggcttgcaggagctcttgcctc 316
             || |  ||| ||||||||| || || || ||||| |||||||| || |||||||  |||
Sbjct: 1467 taa-ctggtggttttggcattctttctgcaacctggatggcttggagaagctcttttctc 1409

                                                                        
Query: 317  acattgttcctgagttgagactcttgagtaccgcaccaccatccattcccctgaacccat 376
            ||  || ||||||| | ||| |||| || | |  |||||||  |||| ||||||||||||
Sbjct: 1408 actctgctcctgagctcagattcttcagcatcagaccaccagtcattaccctgaacccat 1349

                                                                        
Query: 377  tttctgtacctggagacgggatcccttgctgttcgccaatgctccatctcatcagccggc 436
            |||||||| ||||| |  |||||||| ||||||||||||||||| ||||||||| | |||
Sbjct: 1348 tttctgtatctggaaatcggatccctcgctgttcgccaatgctcaatctcatcaactggc 1289

                                                                        
Query: 437  ctgtacttggttgaatcgtcggatgtcgagtgatggccgactcggtaggtcatcgcctcg 496
            ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||  ||||| 
Sbjct: 1288 ctgtacttggtcgaatcatcggatgtcgagtgatggccgactcggtaagtcagtgcctca 1229

                                                                        
Query: 497  attaaaataggccttccttcagttatagccatttcccgggcggtgtgcactgcactgtac 556
            | |||||| || ||||||||||||| ||||||||| ||||| |  || | ||| ||||||
Sbjct: 1228 actaaaattggtcttccttcagttacagccatttctcgggcagcatggattgcgctgtac 1169

                                                                        
Query: 557  acagcaagagtatcgttgccgtctagcctgatactgcgtattccgtaggcctgaccccgg 616
            |||||||||| ||| ||||| ||||  | ||| |  || || || || ||||| || |||
Sbjct: 1168 acagcaagagcatcattgccatctactcggatgccacggatcccataagcctggccacgg 1109

                                         
Query: 617  ntaacaactccgtcacttctgaactgttc 645
             |||||||||| ||||||||||| |||||
Sbjct: 1108 ataacaactccatcacttctgaattgttc 1080
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>gb|BT018525.1| Zea mays clone EL01N0432G12.d mRNA sequence
          Length = 1695

 Score =  204 bits (103), Expect = 3e-49
 Identities = 268/323 (82%)
 Strand = Plus / Minus

                                                                        
Query: 215  aggttggaagggatttgatcataaacatctgtgaagagctccgcaagcccgtgttttggc 274
            |||||||||||||| | ||| |||||||| ||||| ||||| | ||    | ||||||||
Sbjct: 1454 aggttggaagggatcttatcgtaaacatcagtgaaaagctcagtaactgggggttttggc 1395

                                                                        
Query: 275  atcctctcggccacctgaatggcttgcaggagctcttgcctcacattgttcctgagttga 334
            || || || || ||||| |||||||| || |||||||  |||||  || |||||||   |
Sbjct: 1394 attctttctgcaacctggatggcttggagaagctcttttctcactctgctcctgagggca 1335

                                                                        
Query: 335  gactcttgagtaccgcaccaccatccattcccctgaacccattttctgtacctggagacg 394
            || |||| || | |  |||||||  |||| |||||||||||||||||||| ||||| |  
Sbjct: 1334 gattcttcagcatcagaccaccagtcattaccctgaacccattttctgtatctggaaatt 1275

                                                                        
Query: 395  ggatcccttgctgttcgccaatgctccatctcatcagccggcctgtacttggttgaatcg 454
            |||||||| ||||||||||||||||| ||||||||| | |||||||||||||| ||||| 
Sbjct: 1274 ggatccctcgctgttcgccaatgctcaatctcatcaactggcctgtacttggtcgaatca 1215

                                                                        
Query: 455  tcggatgtcgagtgatggccgactcggtaggtcatcgcctcgattaaaataggccttcct 514
            ||||||||||||||||||||||||||||| ||||  ||||| | |||||| || ||||||
Sbjct: 1214 tcggatgtcgagtgatggccgactcggtaagtcagtgcctcaactaaaattggtcttcct 1155

                                   
Query: 515  tcagttatagccatttcccgggc 537
            ||||||| ||||||||| |||||
Sbjct: 1154 tcagttacagccatttctcgggc 1132
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  170 bits (86), Expect = 4e-39
 Identities = 158/182 (86%)
 Strand = Plus / Minus

                                                                           
Query: 307     ctcttgcctcacattgttcctgagttgagactcttgagtaccgcaccaccatccattccc 366
               |||||||||||||||||||||||||| ||| || |    | | |||||||| ||||||||
Sbjct: 4211674 ctcttgcctcacattgttcctgagttcagattcatcttcatcacaccaccagccattccc 4211615

                                                                           
Query: 367     ctgaacccattttctgtacctggagacgggatcccttgctgttcgccaatgctccatctc 426
               |||||||||||||||||||||||| |  ||||| |  ||||||||||| ||||| |||||
Sbjct: 4211614 ctgaacccattttctgtacctggaaatcggatctcgcgctgttcgccagtgctcgatctc 4211555

                                                                           
Query: 427     atcagccggcctgtacttggttgaatcgtcggatgtcgagtgatggccgactcggtaggt 486
               |||  |||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 4211554 atcgaccggcctgtatttggttgaatcatcggatgtcgagtgatggccgacccggtaagt 4211495

                 
Query: 487     ca 488
               ||
Sbjct: 4211494 ca 4211493



 Score =  101 bits (51), Expect = 3e-18
 Identities = 113/134 (84%)
 Strand = Plus / Minus

                                                                           
Query: 499     taaaataggccttccttcagttatagccatttcccgggcggtgtgcactgcactgtacac 558
               |||||| |||||||||||  | ||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 4211413 taaaattggccttccttccttgatagccatttccctggctgtgtgaactgcactgtacac 4211354

                                                                           
Query: 559     agcaagagtatcgttgccgtctagcctgatactgcgtattccgtaggcctgaccccggnt 618
               |||||||| ||| || || ||||  ||||||||||| ||||| || || ||||| ||| |
Sbjct: 4211353 agcaagagcatcatttccatctactctgatactgcgcattccataagcttgaccacggat 4211294

                             
Query: 619     aacaactccgtcac 632
               |||| |||| ||||
Sbjct: 4211293 aacagctccatcac 4211280



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 137/171 (80%)
 Strand = Plus / Minus

                                                                           
Query: 138     actaaacaggcacatcagccggatactctgcagggtgccttttgatggtatccagcagcg 197
               |||||| | |||||||||| || || |||||||||||| | ||||| ||||||  |||| 
Sbjct: 4211930 actaaatatgcacatcagctgggtagtctgcagggtgcttcttgattgtatccctcagca 4211871

                                                                           
Query: 198     accgctcttgctggcgaaggttggaagggatttgatcataaacatctgtgaagagctccg 257
               | ||||||||||  |  ||||||||||| | || |||||||||||| ||||| || || |
Sbjct: 4211870 atcgctcttgctctcttaggttggaaggaacttcatcataaacatcggtgaatagttcag 4211811

                                                                  
Query: 258     caagcccgtgttttggcatcctctcggccacctgaatggcttgcaggagct 308
               | |||    |||| ||||| || || |||||||||||||||| ||| ||||
Sbjct: 4211810 cgagcggcggtttcggcattctttctgccacctgaatggctttcagaagct 4211760



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 631     acttctgaactgttcggcggttggggtgctgattgccc 668
               |||||||||||||||    |||||||||||||||||||
Sbjct: 4211198 acttctgaactgttcactagttggggtgctgattgccc 4211161
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  170 bits (86), Expect = 4e-39
 Identities = 158/182 (86%)
 Strand = Plus / Minus

                                                                           
Query: 307     ctcttgcctcacattgttcctgagttgagactcttgagtaccgcaccaccatccattccc 366
               |||||||||||||||||||||||||| ||| || |    | | |||||||| ||||||||
Sbjct: 4211661 ctcttgcctcacattgttcctgagttcagattcatcttcatcacaccaccagccattccc 4211602

                                                                           
Query: 367     ctgaacccattttctgtacctggagacgggatcccttgctgttcgccaatgctccatctc 426
               |||||||||||||||||||||||| |  ||||| |  ||||||||||| ||||| |||||
Sbjct: 4211601 ctgaacccattttctgtacctggaaatcggatctcgcgctgttcgccagtgctcgatctc 4211542

                                                                           
Query: 427     atcagccggcctgtacttggttgaatcgtcggatgtcgagtgatggccgactcggtaggt 486
               |||  |||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 4211541 atcgaccggcctgtatttggttgaatcatcggatgtcgagtgatggccgacccggtaagt 4211482

                 
Query: 487     ca 488
               ||
Sbjct: 4211481 ca 4211480



 Score =  101 bits (51), Expect = 3e-18
 Identities = 113/134 (84%)
 Strand = Plus / Minus

                                                                           
Query: 499     taaaataggccttccttcagttatagccatttcccgggcggtgtgcactgcactgtacac 558
               |||||| |||||||||||  | ||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 4211400 taaaattggccttccttccttgatagccatttccctggctgtgtgaactgcactgtacac 4211341

                                                                           
Query: 559     agcaagagtatcgttgccgtctagcctgatactgcgtattccgtaggcctgaccccggnt 618
               |||||||| ||| || || ||||  ||||||||||| ||||| || || ||||| ||| |
Sbjct: 4211340 agcaagagcatcatttccatctactctgatactgcgcattccataagcttgaccacggat 4211281

                             
Query: 619     aacaactccgtcac 632
               |||| |||| ||||
Sbjct: 4211280 aacagctccatcac 4211267



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 137/171 (80%)
 Strand = Plus / Minus

                                                                           
Query: 138     actaaacaggcacatcagccggatactctgcagggtgccttttgatggtatccagcagcg 197
               |||||| | |||||||||| || || |||||||||||| | ||||| ||||||  |||| 
Sbjct: 4211917 actaaatatgcacatcagctgggtagtctgcagggtgcttcttgattgtatccctcagca 4211858

                                                                           
Query: 198     accgctcttgctggcgaaggttggaagggatttgatcataaacatctgtgaagagctccg 257
               | ||||||||||  |  ||||||||||| | || |||||||||||| ||||| || || |
Sbjct: 4211857 atcgctcttgctctcttaggttggaaggaacttcatcataaacatcggtgaatagttcag 4211798

                                                                  
Query: 258     caagcccgtgttttggcatcctctcggccacctgaatggcttgcaggagct 308
               | |||    |||| ||||| || || |||||||||||||||| ||| ||||
Sbjct: 4211797 cgagcggcggtttcggcattctttctgccacctgaatggctttcagaagct 4211747



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 631     acttctgaactgttcggcggttggggtgctgattgccc 668
               |||||||||||||||    |||||||||||||||||||
Sbjct: 4211185 acttctgaactgttcactagttggggtgctgattgccc 4211148
to top
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09
             of library OSJNBb from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 104999

 Score =  170 bits (86), Expect = 4e-39
 Identities = 158/182 (86%)
 Strand = Plus / Plus

                                                                         
Query: 307   ctcttgcctcacattgttcctgagttgagactcttgagtaccgcaccaccatccattccc 366
             |||||||||||||||||||||||||| ||| || |    | | |||||||| ||||||||
Sbjct: 72109 ctcttgcctcacattgttcctgagttcagattcatcttcatcacaccaccagccattccc 72168

                                                                         
Query: 367   ctgaacccattttctgtacctggagacgggatcccttgctgttcgccaatgctccatctc 426
             |||||||||||||||||||||||| |  ||||| |  ||||||||||| ||||| |||||
Sbjct: 72169 ctgaacccattttctgtacctggaaatcggatctcgcgctgttcgccagtgctcgatctc 72228

                                                                         
Query: 427   atcagccggcctgtacttggttgaatcgtcggatgtcgagtgatggccgactcggtaggt 486
             |||  |||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 72229 atcgaccggcctgtatttggttgaatcatcggatgtcgagtgatggccgacccggtaagt 72288

               
Query: 487   ca 488
             ||
Sbjct: 72289 ca 72290



 Score =  101 bits (51), Expect = 3e-18
 Identities = 113/134 (84%)
 Strand = Plus / Plus

                                                                         
Query: 499   taaaataggccttccttcagttatagccatttcccgggcggtgtgcactgcactgtacac 558
             |||||| |||||||||||  | ||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 72370 taaaattggccttccttccttgatagccatttccctggctgtgtgaactgcactgtacac 72429

                                                                         
Query: 559   agcaagagtatcgttgccgtctagcctgatactgcgtattccgtaggcctgaccccggnt 618
             |||||||| ||| || || ||||  ||||||||||| ||||| || || ||||| ||| |
Sbjct: 72430 agcaagagcatcatttccatctactctgatactgcgcattccataagcttgaccacggat 72489

                           
Query: 619   aacaactccgtcac 632
             |||| |||| ||||
Sbjct: 72490 aacagctccatcac 72503



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 137/171 (80%)
 Strand = Plus / Plus

                                                                         
Query: 138   actaaacaggcacatcagccggatactctgcagggtgccttttgatggtatccagcagcg 197
             |||||| | |||||||||| || || |||||||||||| | ||||| ||||||  |||| 
Sbjct: 71853 actaaatatgcacatcagctgggtagtctgcagggtgcttcttgattgtatccctcagca 71912

                                                                         
Query: 198   accgctcttgctggcgaaggttggaagggatttgatcataaacatctgtgaagagctccg 257
             | ||||||||||  |  ||||||||||| | || |||||||||||| ||||| || || |
Sbjct: 71913 atcgctcttgctctcttaggttggaaggaacttcatcataaacatcggtgaatagttcag 71972

                                                                
Query: 258   caagcccgtgttttggcatcctctcggccacctgaatggcttgcaggagct 308
             | |||    |||| ||||| || || |||||||||||||||| ||| ||||
Sbjct: 71973 cgagcggcggtttcggcattctttctgccacctgaatggctttcagaagct 72023



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 631   acttctgaactgttcggcggttggggtgctgattgccc 668
             |||||||||||||||    |||||||||||||||||||
Sbjct: 72585 acttctgaactgttcactagttggggtgctgattgccc 72622
to top
>gb|AF251067.1|AF251067 Oryza sativa branched chain alpha-keto acid dehydrogenase E1-alpha
           subunit mRNA, partial cds
          Length = 258

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                       
Query: 555 acacagcaagagtatcgttgccgtctagcctgatactgcgtattccgtaggcctgacccc 614
           |||||||||||| ||| || || ||||  ||||||||||| ||||| || || ||||| |
Sbjct: 258 acacagcaagagcatcatttccatctactctgatactgcgcattccataagcttgaccac 199

                                                              
Query: 615 ggntaacaactccgtcacttctgaactgttcggcggttggggtgctgattg 665
           || ||||| |||| |||||||||||||||||    ||||||||||||||||
Sbjct: 198 ggataacagctccatcacttctgaactgttcactagttggggtgctgattg 148
to top
>emb|AL021480.1|CEY39E4A Caenorhabditis elegans YAC Y39E4A, complete sequence
          Length = 26209

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 452   tcgtcggatgtcgagtgatggccgactcggtaggtcatcgcctcgat 498
             ||||||||||| || ||||||||||  ||||||||||| ||||||||
Sbjct: 18640 tcgtcggatgttgaatgatggccgaggcggtaggtcatggcctcgat 18686
to top
>gb|AC121233.16| Medicago truncatula clone mth2-14g13, complete sequence
          Length = 129617

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 437   ctgtacttggttgaatcgtcggatgtcgagtgatggccgactc 479
             |||||||||||||||||||||||||| || || ||||| ||||
Sbjct: 57722 ctgtacttggttgaatcgtcggatgtagaatggtggcctactc 57680
to top
>ref|NM_001038287.1| Caenorhabditis elegans Y39E4A.3a (Transketolase) mRNA, complete cds
          Length = 1400

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 452  tcgtcggatgtcgagtgatggccgactcggtaggtcatcgcctcgat 498
            ||||||||||| || ||||||||||  ||||||||||| ||||||||
Sbjct: 1075 tcgtcggatgttgaatgatggccgaggcggtaggtcatggcctcgat 1029
to top
>ref|NM_001038288.1| Caenorhabditis elegans Y39E4A.3b (Transketolase) mRNA, complete cds
          Length = 1677

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 452  tcgtcggatgtcgagtgatggccgactcggtaggtcatcgcctcgat 498
            ||||||||||| || ||||||||||  ||||||||||| ||||||||
Sbjct: 1075 tcgtcggatgttgaatgatggccgaggcggtaggtcatggcctcgat 1029
to top
>ref|XM_756727.1| Ustilago maydis 521 hypothetical protein (UM05673.1) partial mRNA
          Length = 2361

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 452  tcgtcggatgtcgagtgatggccgactcggtaggtcatcgcctcgat 498
            ||||| || |||||||| || ||||| ||||||||||| ||||||||
Sbjct: 1997 tcgtccgaggtcgagtggtgaccgacgcggtaggtcatagcctcgat 1951
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>ref|NM_111356.3| Arabidopsis thaliana structural constituent of ribosome AT3G04840
           mRNA, complete cds
          Length = 1004

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 ccatctcatcagccggcctgt 440
           |||||||||||||||||||||
Sbjct: 812 ccatctcatcagccggcctgt 792
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>gb|AY081585.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase
           specific) (At3g04840) mRNA, complete cds
          Length = 870

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 ccatctcatcagccggcctgt 440
           |||||||||||||||||||||
Sbjct: 754 ccatctcatcagccggcctgt 734
to top
>gb|AY062796.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase
           specific) (At3g04840; T9J14.21) mRNA, complete cds
          Length = 1000

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 ccatctcatcagccggcctgt 440
           |||||||||||||||||||||
Sbjct: 811 ccatctcatcagccggcctgt 791
to top
>dbj|AK220818.1| Arabidopsis thaliana mRNA for 40S ribosomal protein S3A like
           protein, complete cds, clone: RAFL22-32-J16
          Length = 468

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 ccatctcatcagccggcctgt 440
           |||||||||||||||||||||
Sbjct: 269 ccatctcatcagccggcctgt 249
to top
>emb|BX822077.1|CNS0A7LX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB10ZB01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 716

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 ccatctcatcagccggcctgt 440
           |||||||||||||||||||||
Sbjct: 524 ccatctcatcagccggcctgt 504
to top
>emb|BX824488.1|CNS0A5KP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH51ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 927

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 ccatctcatcagccggcctgt 440
           |||||||||||||||||||||
Sbjct: 744 ccatctcatcagccggcctgt 724
to top
>gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J14 genomic sequence, complete
             sequence
          Length = 93234

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 420   ccatctcatcagccggcctgt 440
             |||||||||||||||||||||
Sbjct: 73562 ccatctcatcagccggcctgt 73582
to top
>gb|AY085787.1| Arabidopsis thaliana clone 18185 mRNA, complete sequence
          Length = 1001

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 ccatctcatcagccggcctgt 440
           |||||||||||||||||||||
Sbjct: 812 ccatctcatcagccggcctgt 792
to top
>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16,
              complete sequence
          Length = 162082

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     gggtacttacagactccaac 117
              ||||||||||||||||||||
Sbjct: 126085 gggtacttacagactccaac 126104
to top
>gb|AC012297.12| Mus musculus chromosome 7, clone RP23-78H9, complete sequence
          Length = 180139

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   atgctccatctcatcagccg 434
             ||||||||||||||||||||
Sbjct: 15240 atgctccatctcatcagccg 15221
to top
>ref|XM_584132.2| PREDICTED: Bos taurus similar to Sulfonylurea receptor 1 (LOC538996),
            mRNA
          Length = 2629

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  acagactccaacaacatcgc 125
            ||||||||||||||||||||
Sbjct: 1483 acagactccaacaacatcgc 1502
to top
>gb|AY485632.1| Sphaerophorus globosus DNA-dependent RNA polymerase II second
           largest subunit gene, partial cds
          Length = 2758

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 aggagctcttgcctcacatt 321
           ||||||||||||||||||||
Sbjct: 461 aggagctcttgcctcacatt 480
to top
>emb|CR854931.8| Zebrafish DNA sequence from clone DKEY-30P2 in linkage group 14,
             complete sequence
          Length = 203332

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aattcaagctataatcaata 61
             ||||||||||||||||||||
Sbjct: 84164 aattcaagctataatcaata 84183
to top
>emb|CR854933.8| Zebrafish DNA sequence from clone DKEY-48H17 in linkage group 14,
              complete sequence
          Length = 190712

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     aattcaagctataatcaata 61
              ||||||||||||||||||||
Sbjct: 122881 aattcaagctataatcaata 122862
to top
>emb|AL031433.4|HS171N11 Human DNA sequence from clone RP1-171N11 on chromosome 6q23 Contains
             the 5' end of a novel gene, the gene for UC28 protein
             (UROC28) and a CpG island, complete sequence
          Length = 129227

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ccacctgaatggcttgcagg 304
             ||||||||||||||||||||
Sbjct: 80878 ccacctgaatggcttgcagg 80859
to top
>gb|AC091639.5| Homo sapiens chromosome 8, clone RP11-61K18, complete sequence
          Length = 147480

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    agcagtttattcctcctttt 30
             ||||||||||||||||||||
Sbjct: 87767 agcagtttattcctcctttt 87748
to top
>gb|AC093879.3| Homo sapiens BAC clone RP11-650J17 from 4, complete sequence
          Length = 216870

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    gcttgcaggagctcttgcct 315
              ||||||||||||||||||||
Sbjct: 143206 gcttgcaggagctcttgcct 143187
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>gb|AC090960.3| Homo sapiens chromosome 3 clone RP11-83E7 map 3p, complete sequence
          Length = 176744

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    ttattcatgggtacttacag 109
             ||||||||||||||||||||
Sbjct: 48384 ttattcatgggtacttacag 48365
to top
>ref|NM_058988.1| Caenorhabditis elegans Y119C1B.10 (Y119C1B.10) mRNA, complete cds
          Length = 915

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 tacagactccaacaacatcg 124
           ||||||||||||||||||||
Sbjct: 633 tacagactccaacaacatcg 652
to top
>emb|BX548166.7| Zebrafish DNA sequence from clone CH211-280G5 in linkage group 10,
             complete sequence
          Length = 166449

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aattcaagctataatcaata 61
             ||||||||||||||||||||
Sbjct: 45541 aattcaagctataatcaata 45560
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 98       gggtacttacagactccaac 117
                ||||||||||||||||||||
Sbjct: 16334732 gggtacttacagactccaac 16334751
to top
>gb|AC025828.3|AC025828 Homo sapiens, clone RP11-13I24, complete sequence
          Length = 152843

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     agcagtttattcctcctttt 30
              ||||||||||||||||||||
Sbjct: 108886 agcagtttattcctcctttt 108905
to top
>dbj|AK120753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006K02, full
            insert sequence
          Length = 4617

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   gggtacttacagactccaac 117
            ||||||||||||||||||||
Sbjct: 2472 gggtacttacagactccaac 2453
to top
>dbj|AK070681.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063E02, full
            insert sequence
          Length = 3424

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   gggtacttacagactccaac 117
            ||||||||||||||||||||
Sbjct: 2277 gggtacttacagactccaac 2258
to top
>gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complete sequence
          Length = 190414

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  atgctccatctcatcagccg 434
            ||||||||||||||||||||
Sbjct: 1911 atgctccatctcatcagccg 1930


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,011,974
Number of Sequences: 3902068
Number of extensions: 5011974
Number of successful extensions: 135994
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135842
Number of HSP's gapped (non-prelim): 137
length of query: 668
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 645
effective length of database: 17,143,297,704
effective search space: 11057427019080
effective search space used: 11057427019080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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