Clone Name | rbasd14e15 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK060099.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H01, full insert sequence Length = 957 Score = 494 bits (249), Expect = e-136 Identities = 378/421 (89%) Strand = Plus / Minus Query: 245 tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtgggcgtcttg 304 ||||||| ||| |||||||| ||||||| ||||||||||||| |||||||| |||||| Sbjct: 518 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttg 459 Query: 305 aaggtgatcttggaggggtcgtccttgtcgatgaacatgtcgcagagcgtgatccagatg 364 |||||||||||||||||||||||||||||||||||||||||| |||| | || ||||||| Sbjct: 458 aaggtgatcttggaggggtcgtccttgtcgatgaacatgtcggagagggagacccagatg 399 Query: 365 aggagctccttgctcttgaccccggtcatgcgcttcatcttgcggtcctcgacgaaggcc 424 |||||||||||| ||||| ||||||| | |||||||||| |||||||||||||||||| Sbjct: 398 aggagctccttggtcttggccccggtgacgcgcttcatccggcggtcctcgacgaaggcg 339 Query: 425 gtcacctcggtggcgtacgagacctgccgcccgatctgcttgaaggtgtgcgtgagcgcc 484 || ||||||| |||| |||||||||||| | |||||||||||||||||| |||| ||| Sbjct: 338 gtgacctcggcggcgaacgagacctgcctgctgatctgcttgaaggtgtgggtgatggcc 279 Query: 485 ttcttctggcgcagccagacgaagccggtggcgcggttgtagcccacctcctccatgtcc 544 ||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 278 ttcttctggcgcagccacacgaaccccgtggcgcggttgtagccgacctcctccatctcc 219 Query: 545 gccagcggcagcaggcccagcggcatgttggtctcggccagcagctccaccgccttctcc 604 |||||||||||||||||||||||||||| | |||| || || |||||||||||||||||| Sbjct: 218 gccagcggcagcaggcccagcggcatgtggatctccgcgaggagctccaccgccttctcc 159 Query: 605 gcgcacagcgccgcgccgtggtacacctccgcgccctccctctgagcctcgatcgcctgc 664 |||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||||||| Sbjct: 158 gcgcacagcgccgccccgtggtacacctccgccccctccctgtgcgcctctatcgcctgc 99 Query: 665 g 665 | Sbjct: 98 g 98
>ref|NM_188391.1| Oryza sativa (japonica cultivar-group), Ozsa8117 predicted mRNA Length = 504 Score = 486 bits (245), Expect = e-134 Identities = 377/421 (89%) Strand = Plus / Minus Query: 245 tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtgggcgtcttg 304 ||||||| ||| |||||||| ||||||| ||||||||||||| |||||||| |||||| Sbjct: 428 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttg 369 Query: 305 aaggtgatcttggaggggtcgtccttgtcgatgaacatgtcgcagagcgtgatccagatg 364 |||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| Sbjct: 368 aaggtgatcttggaggcgtcgtccttgtcgatgaacatgtcggagagggagacccagatg 309 Query: 365 aggagctccttgctcttgaccccggtcatgcgcttcatcttgcggtcctcgacgaaggcc 424 |||||||||||| ||||| ||||||| | |||||||||| |||||||||||||||||| Sbjct: 308 aggagctccttggtcttggccccggtgacgcgcttcatccggcggtcctcgacgaaggcg 249 Query: 425 gtcacctcggtggcgtacgagacctgccgcccgatctgcttgaaggtgtgcgtgagcgcc 484 || ||||||| |||| |||||||||||| | |||||||||||||||||| |||| ||| Sbjct: 248 gtgacctcggcggcgaacgagacctgcctgctgatctgcttgaaggtgtgggtgatggcc 189 Query: 485 ttcttctggcgcagccagacgaagccggtggcgcggttgtagcccacctcctccatgtcc 544 ||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 188 ttcttctggcgcagccacacgaaccccgtggcgcggttgtagccgacctcctccatctcc 129 Query: 545 gccagcggcagcaggcccagcggcatgttggtctcggccagcagctccaccgccttctcc 604 |||||||||||||||||||||||||||| | |||| || || |||||||||||||||||| Sbjct: 128 gccagcggcagcaggcccagcggcatgtggatctccgcgaggagctccaccgccttctcc 69 Query: 605 gcgcacagcgccgcgccgtggtacacctccgcgccctccctctgagcctcgatcgcctgc 664 |||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||||||| Sbjct: 68 gcgcacagcgccgccccgtggtacacctccgccccctccctgtgcgcctctatcgcctgc 9 Query: 665 g 665 | Sbjct: 8 g 8
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 486 bits (245), Expect = e-134 Identities = 377/421 (89%) Strand = Plus / Plus Query: 245 tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtgggcgtcttg 304 ||||||| ||| |||||||| ||||||| ||||||||||||| |||||||| |||||| Sbjct: 6010301 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttg 6010360 Query: 305 aaggtgatcttggaggggtcgtccttgtcgatgaacatgtcgcagagcgtgatccagatg 364 |||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| Sbjct: 6010361 aaggtgatcttggaggcgtcgtccttgtcgatgaacatgtcggagagggagacccagatg 6010420 Query: 365 aggagctccttgctcttgaccccggtcatgcgcttcatcttgcggtcctcgacgaaggcc 424 |||||||||||| ||||| ||||||| | |||||||||| |||||||||||||||||| Sbjct: 6010421 aggagctccttggtcttggccccggtgacgcgcttcatccggcggtcctcgacgaaggcg 6010480 Query: 425 gtcacctcggtggcgtacgagacctgccgcccgatctgcttgaaggtgtgcgtgagcgcc 484 || ||||||| |||| |||||||||||| | |||||||||||||||||| |||| ||| Sbjct: 6010481 gtgacctcggcggcgaacgagacctgcctgctgatctgcttgaaggtgtgggtgatggcc 6010540 Query: 485 ttcttctggcgcagccagacgaagccggtggcgcggttgtagcccacctcctccatgtcc 544 ||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 6010541 ttcttctggcgcagccacacgaaccccgtggcgcggttgtagccgacctcctccatctcc 6010600 Query: 545 gccagcggcagcaggcccagcggcatgttggtctcggccagcagctccaccgccttctcc 604 |||||||||||||||||||||||||||| | |||| || || |||||||||||||||||| Sbjct: 6010601 gccagcggcagcaggcccagcggcatgtggatctccgcgaggagctccaccgccttctcc 6010660 Query: 605 gcgcacagcgccgcgccgtggtacacctccgcgccctccctctgagcctcgatcgcctgc 664 |||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||||||| Sbjct: 6010661 gcgcacagcgccgccccgtggtacacctccgccccctccctgtgcgcctctatcgcctgc 6010720 Query: 665 g 665 | Sbjct: 6010721 g 6010721
>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466B10 Length = 151806 Score = 486 bits (245), Expect = e-134 Identities = 377/421 (89%) Strand = Plus / Plus Query: 245 tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtgggcgtcttg 304 ||||||| ||| |||||||| ||||||| ||||||||||||| |||||||| |||||| Sbjct: 78189 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttg 78248 Query: 305 aaggtgatcttggaggggtcgtccttgtcgatgaacatgtcgcagagcgtgatccagatg 364 |||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| Sbjct: 78249 aaggtgatcttggaggcgtcgtccttgtcgatgaacatgtcggagagggagacccagatg 78308 Query: 365 aggagctccttgctcttgaccccggtcatgcgcttcatcttgcggtcctcgacgaaggcc 424 |||||||||||| ||||| ||||||| | |||||||||| |||||||||||||||||| Sbjct: 78309 aggagctccttggtcttggccccggtgacgcgcttcatccggcggtcctcgacgaaggcg 78368 Query: 425 gtcacctcggtggcgtacgagacctgccgcccgatctgcttgaaggtgtgcgtgagcgcc 484 || ||||||| |||| |||||||||||| | |||||||||||||||||| |||| ||| Sbjct: 78369 gtgacctcggcggcgaacgagacctgcctgctgatctgcttgaaggtgtgggtgatggcc 78428 Query: 485 ttcttctggcgcagccagacgaagccggtggcgcggttgtagcccacctcctccatgtcc 544 ||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 78429 ttcttctggcgcagccacacgaaccccgtggcgcggttgtagccgacctcctccatctcc 78488 Query: 545 gccagcggcagcaggcccagcggcatgttggtctcggccagcagctccaccgccttctcc 604 |||||||||||||||||||||||||||| | |||| || || |||||||||||||||||| Sbjct: 78489 gccagcggcagcaggcccagcggcatgtggatctccgcgaggagctccaccgccttctcc 78548 Query: 605 gcgcacagcgccgcgccgtggtacacctccgcgccctccctctgagcctcgatcgcctgc 664 |||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||||||| Sbjct: 78549 gcgcacagcgccgccccgtggtacacctccgccccctccctgtgcgcctctatcgcctgc 78608 Query: 665 g 665 | Sbjct: 78609 g 78609
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 486 bits (245), Expect = e-134 Identities = 377/421 (89%) Strand = Plus / Plus Query: 245 tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtgggcgtcttg 304 ||||||| ||| |||||||| ||||||| ||||||||||||| |||||||| |||||| Sbjct: 34658 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttg 34717 Query: 305 aaggtgatcttggaggggtcgtccttgtcgatgaacatgtcgcagagcgtgatccagatg 364 |||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| Sbjct: 34718 aaggtgatcttggaggcgtcgtccttgtcgatgaacatgtcggagagggagacccagatg 34777 Query: 365 aggagctccttgctcttgaccccggtcatgcgcttcatcttgcggtcctcgacgaaggcc 424 |||||||||||| ||||| ||||||| | |||||||||| |||||||||||||||||| Sbjct: 34778 aggagctccttggtcttggccccggtgacgcgcttcatccggcggtcctcgacgaaggcg 34837 Query: 425 gtcacctcggtggcgtacgagacctgccgcccgatctgcttgaaggtgtgcgtgagcgcc 484 || ||||||| |||| |||||||||||| | |||||||||||||||||| |||| ||| Sbjct: 34838 gtgacctcggcggcgaacgagacctgcctgctgatctgcttgaaggtgtgggtgatggcc 34897 Query: 485 ttcttctggcgcagccagacgaagccggtggcgcggttgtagcccacctcctccatgtcc 544 ||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 34898 ttcttctggcgcagccacacgaaccccgtggcgcggttgtagccgacctcctccatctcc 34957 Query: 545 gccagcggcagcaggcccagcggcatgttggtctcggccagcagctccaccgccttctcc 604 |||||||||||||||||||||||||||| | |||| || || |||||||||||||||||| Sbjct: 34958 gccagcggcagcaggcccagcggcatgtggatctccgcgaggagctccaccgccttctcc 35017 Query: 605 gcgcacagcgccgcgccgtggtacacctccgcgccctccctctgagcctcgatcgcctgc 664 |||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||||||| Sbjct: 35018 gcgcacagcgccgccccgtggtacacctccgccccctccctgtgcgcctctatcgcctgc 35077 Query: 665 g 665 | Sbjct: 35078 g 35078
>dbj|AK119774.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F06, full insert sequence Length = 787 Score = 486 bits (245), Expect = e-134 Identities = 377/421 (89%) Strand = Plus / Minus Query: 245 tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtgggcgtcttg 304 ||||||| ||| |||||||| ||||||| ||||||||||||| |||||||| |||||| Sbjct: 520 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttg 461 Query: 305 aaggtgatcttggaggggtcgtccttgtcgatgaacatgtcgcagagcgtgatccagatg 364 |||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| Sbjct: 460 aaggtgatcttggaggcgtcgtccttgtcgatgaacatgtcggagagggagacccagatg 401 Query: 365 aggagctccttgctcttgaccccggtcatgcgcttcatcttgcggtcctcgacgaaggcc 424 |||||||||||| ||||| ||||||| | |||||||||| |||||||||||||||||| Sbjct: 400 aggagctccttggtcttggccccggtgacgcgcttcatccggcggtcctcgacgaaggcg 341 Query: 425 gtcacctcggtggcgtacgagacctgccgcccgatctgcttgaaggtgtgcgtgagcgcc 484 || ||||||| |||| |||||||||||| | |||||||||||||||||| |||| ||| Sbjct: 340 gtgacctcggcggcgaacgagacctgcctgctgatctgcttgaaggtgtgggtgatggcc 281 Query: 485 ttcttctggcgcagccagacgaagccggtggcgcggttgtagcccacctcctccatgtcc 544 ||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 280 ttcttctggcgcagccacacgaaccccgtggcgcggttgtagccgacctcctccatctcc 221 Query: 545 gccagcggcagcaggcccagcggcatgttggtctcggccagcagctccaccgccttctcc 604 |||||||||||||||||||||||||||| | |||| || || |||||||||||||||||| Sbjct: 220 gccagcggcagcaggcccagcggcatgtggatctccgcgaggagctccaccgccttctcc 161 Query: 605 gcgcacagcgccgcgccgtggtacacctccgcgccctccctctgagcctcgatcgcctgc 664 |||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||||||| Sbjct: 160 gcgcacagcgccgccccgtggtacacctccgccccctccctgtgcgcctctatcgcctgc 101 Query: 665 g 665 | Sbjct: 100 g 100
>gb|AY110901.1| Zea mays CL7341_1 mRNA sequence Length = 746 Score = 379 bits (191), Expect = e-102 Identities = 299/335 (89%) Strand = Plus / Minus Query: 258 cgaaggcggagacggggaaggtcctcccgagcccggtgggcgtcttgaaggtgatcttgg 317 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 446 cgaaggcggagacggggtaggtcctgccgagcccggtgggcgtcttgaaggtgatcttgg 387 Query: 318 aggggtcgtccttgtcgatgaacatgtcgcagagcgtgatccagatgaggagctccttgc 377 ||||||||||| |||||| |||||||||| |||| |||| ||||||||||||||||||| Sbjct: 386 aggggtcgtccctgtcgacgaacatgtcggagagggtgacccagatgaggagctccttgg 327 Query: 378 tcttgaccccggtcatgcgcttcatcttgcggtcctcgacgaaggccgtcacctcggtgg 437 |||||||||||||||||||| ||||| |||||||| |||||||| || ||||||| || Sbjct: 326 tcttgaccccggtcatgcgcctcatccgccggtcctccacgaaggcggtgacctcggcgg 267 Query: 438 cgtacgagacctgccgcccgatctgcttgaaggtgtgcgtgagcgccttcttctggcgca 497 ||||||||||||| ||| ||||| | ||| ||||||||||||| |||| ||||||||| Sbjct: 266 cgtacgagacctggcgcgcgatcgggcggaacgtgtgcgtgagcgacttcctctggcgca 207 Query: 498 gccagacgaagccggtggcgcggttgtagcccacctcctccatgtccgccagcggcagca 557 |||| |||||||| ||||||||||||||||| |||||||||||||| ||||||| ||||| Sbjct: 206 gccacacgaagcccgtggcgcggttgtagccgacctcctccatgtcggccagcgacagca 147 Query: 558 ggcccagcggcatgttggtctcggccagcagctcc 592 |||||||||| | || | ||| |||||||||||| Sbjct: 146 ggcccagcgggaggtgcgcctctgccagcagctcc 112
>gb|BT009174.1| Triticum aestivum clone wl1n.pk0107.h1:fis, full insert mRNA sequence Length = 862 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 353 gtgatccagatgaggagctccttgctcttgaccccgg 389 |||| |||||||||||||||||||||||| ||||||| Sbjct: 407 gtgacccagatgaggagctccttgctcttcaccccgg 371
>gb|AY105303.1| Zea mays PCO075489 mRNA sequence Length = 894 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 353 gtgatccagatgaggagctccttgctcttgaccccgg 389 |||| |||||||||||||||||||||||| ||||||| Sbjct: 429 gtgacccagatgaggagctccttgctcttcaccccgg 393
>gb|AF466285.1| Oryza sativa susceptibility homeodomain transciption factor (HDTF) mRNA, partial cds Length = 580 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 358 ccagatgaggagctccttgctcttgaccccgg 389 |||||||||||||||||||||||| ||||||| Sbjct: 188 ccagatgaggagctccttgctcttcaccccgg 157 Score = 44.1 bits (22), Expect = 0.61 Identities = 37/42 (88%) Strand = Plus / Minus Query: 497 agccagacgaagccggtggcgcggttgtagcccacctcctcc 538 ||||| ||||| |||| |||||||||||| || ||||||||| Sbjct: 43 agccacacgaacccggcggcgcggttgtacccgacctcctcc 2
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 358 ccagatgaggagctccttgctcttgaccccgg 389 |||||||||||||||||||||||| ||||||| Sbjct: 19876477 ccagatgaggagctccttgctcttcaccccgg 19876508 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 497 agccagacgaagccggtggcgcggttgtagcccacctcctcca 539 ||||| ||||| |||| |||||||||||| || |||||||||| Sbjct: 19876622 agccacacgaacccggcggcgcggttgtacccgacctcctcca 19876664 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 ccgcgcacagcgccgcgccg 622 |||||||||||||||||||| Sbjct: 4373721 ccgcgcacagcgccgcgccg 4373702
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0551A03 Length = 173027 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 358 ccagatgaggagctccttgctcttgaccccgg 389 |||||||||||||||||||||||| ||||||| Sbjct: 143522 ccagatgaggagctccttgctcttcaccccgg 143553 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 497 agccagacgaagccggtggcgcggttgtagcccacctcctcca 539 ||||| ||||| |||| |||||||||||| || |||||||||| Sbjct: 143667 agccacacgaacccggcggcgcggttgtacccgacctcctcca 143709
>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1018E06 Length = 178499 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 358 ccagatgaggagctccttgctcttgaccccgg 389 |||||||||||||||||||||||| ||||||| Sbjct: 14817 ccagatgaggagctccttgctcttcaccccgg 14848 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 497 agccagacgaagccggtggcgcggttgtagcccacctcctcca 539 ||||| ||||| |||| |||||||||||| || |||||||||| Sbjct: 14962 agccacacgaacccggcggcgcggttgtacccgacctcctcca 15004
>dbj|AK122046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114A14, full insert sequence Length = 779 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 358 ccagatgaggagctccttgctcttgaccccgg 389 |||||||||||||||||||||||| ||||||| Sbjct: 398 ccagatgaggagctccttgctcttcaccccgg 367 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Minus Query: 497 agccagacgaagccggtggcgcggttgtagcccacctcctcca 539 ||||| ||||| |||| |||||||||||| || |||||||||| Sbjct: 253 agccacacgaacccggcggcgcggttgtacccgacctcctcca 211
>dbj|AK063825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A08, full insert sequence Length = 784 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 358 ccagatgaggagctccttgctcttgaccccgg 389 |||||||||||||||||||||||| ||||||| Sbjct: 392 ccagatgaggagctccttgctcttcaccccgg 361 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Minus Query: 497 agccagacgaagccggtggcgcggttgtagcccacctcctcca 539 ||||| ||||| |||| |||||||||||| || |||||||||| Sbjct: 247 agccacacgaacccggcggcgcggttgtacccgacctcctcca 205
>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017H17, complete sequence Length = 156331 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 413 tcgacgaaggccgtcacctcggtggcgtacgagac 447 |||||||| |||||||||||||||||||| ||||| Sbjct: 8640 tcgacgaacgccgtcacctcggtggcgtaggagac 8606 Score = 46.1 bits (23), Expect = 0.16 Identities = 53/63 (84%) Strand = Plus / Minus Query: 413 tcgacgaaggccgtcacctcggtggcgtacgagacctgccgcccgatctgcttgaaggtg 472 |||||||| ||||||||||||||||| || ||||| | || ||||| |||||||||| Sbjct: 6864 tcgacgaatgccgtcacctcggtggcataggagactgtctgcttgatcttcttgaaggtg 6805 Query: 473 tgc 475 ||| Sbjct: 6804 tgc 6802
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 413 tcgacgaaggccgtcacctcggtggcgtacgagac 447 |||||||| |||||||||||||||||||| ||||| Sbjct: 149850 tcgacgaacgccgtcacctcggtggcgtaggagac 149816 Score = 46.1 bits (23), Expect = 0.16 Identities = 53/63 (84%) Strand = Plus / Minus Query: 413 tcgacgaaggccgtcacctcggtggcgtacgagacctgccgcccgatctgcttgaaggtg 472 |||||||| ||||||||||||||||| || ||||| | || ||||| |||||||||| Sbjct: 148074 tcgacgaatgccgtcacctcggtggcataggagactgtctgcttgatcttcttgaaggtg 148015 Query: 473 tgc 475 ||| Sbjct: 148014 tgc 148012
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 413 tcgacgaaggccgtcacctcggtggcgtacgagac 447 |||||||| |||||||||||||||||||| ||||| Sbjct: 21797797 tcgacgaacgccgtcacctcggtggcgtaggagac 21797763 Score = 46.1 bits (23), Expect = 0.16 Identities = 53/63 (84%) Strand = Plus / Minus Query: 413 tcgacgaaggccgtcacctcggtggcgtacgagacctgccgcccgatctgcttgaaggtg 472 |||||||| ||||||||||||||||| || ||||| | || ||||| |||||||||| Sbjct: 21796021 tcgacgaatgccgtcacctcggtggcataggagactgtctgcttgatcttcttgaaggtg 21795962 Query: 473 tgc 475 ||| Sbjct: 21795961 tgc 21795959
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 413 tcgacgaaggccgtcacctcggtggcgtacgagac 447 |||||||| |||||||||||||||||||| ||||| Sbjct: 22107996 tcgacgaacgccgtcacctcggtggcgtaggagac 22107962 Score = 46.1 bits (23), Expect = 0.16 Identities = 53/63 (84%) Strand = Plus / Minus Query: 413 tcgacgaaggccgtcacctcggtggcgtacgagacctgccgcccgatctgcttgaaggtg 472 |||||||| ||||||||||||||||| || ||||| | || ||||| |||||||||| Sbjct: 22106220 tcgacgaatgccgtcacctcggtggcataggagactgtctgcttgatcttcttgaaggtg 22106161 Query: 473 tgc 475 ||| Sbjct: 22106160 tgc 22106158
>ref|XM_953549.1| Neurospora crassa OR74A hypothetical protein (NCU09875.1) partial mRNA Length = 1563 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 ccttggcgtcgtccttcttctcg 259 ||||||||||||||||||||||| Sbjct: 1432 ccttggcgtcgtccttcttctcg 1410
>ref|XM_330796.1| Neurospora crassa OR74A hypothetical protein (NCU09875.1) partial mRNA Length = 1563 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 ccttggcgtcgtccttcttctcg 259 ||||||||||||||||||||||| Sbjct: 1432 ccttggcgtcgtccttcttctcg 1410
>gb|AC159438.1| Trypanosoma brucei chromosome 8 clone RPCI93-29O4, complete sequence Length = 138187 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 ggactcgagaactcttcatccaatccaaac 162 ||||| ||||||||||||||| |||||||| Sbjct: 64167 ggactggagaactcttcatccgatccaaac 64196 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 ggactcgagaactcttcatccaatccaaac 162 ||||| ||||||||||||||| |||||||| Sbjct: 58033 ggactggagaactcttcatccgatccaaac 58062
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 ggactcgagaactcttcatccaatccaaac 162 ||||| ||||||||||||||| |||||||| Sbjct: 381620 ggactggagaactcttcatccgatccaaac 381649 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 ggactcgagaactcttcatccaatccaaac 162 ||||| ||||||||||||||| |||||||| Sbjct: 375486 ggactggagaactcttcatccgatccaaac 375515
>gb|AF507073.2| Trypanosoma brucei vacuolar-type Ca2+-ATPase gene, complete cds Length = 15626 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 133 ggactcgagaactcttcatccaatccaaac 162 ||||| ||||||||||||||| |||||||| Sbjct: 15561 ggactggagaactcttcatccgatccaaac 15532
>gb|AF359561.1| Trypanosoma brucei vacuolar-type Ca2+-ATPase (TbA1) gene, complete cds Length = 5430 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 133 ggactcgagaactcttcatccaatccaaac 162 ||||| ||||||||||||||| |||||||| Sbjct: 5365 ggactggagaactcttcatccgatccaaac 5336
>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence Length = 338007 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 gcagctgcggccgtagccttgg 242 |||||||||||||||||||||| Sbjct: 102309 gcagctgcggccgtagccttgg 102330
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 cgacggcctccttgccgccggc 222 |||||||||||||||||||||| Sbjct: 293549 cgacggcctccttgccgccggc 293528
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 cgacggcctccttgccgccggc 222 |||||||||||||||||||||| Sbjct: 212435 cgacggcctccttgccgccggc 212414
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 cgacggcctccttgccgccggc 222 |||||||||||||||||||||| Sbjct: 36268 cgacggcctccttgccgccggc 36289
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 353 gtgatccagatgaggagctccttgctcttgaccccggt 390 |||| ||||||||||||||||||| |||||| ||||| Sbjct: 23149543 gtgacccagatgaggagctccttggccttgacgccggt 23149506
>dbj|AK109434.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G11, full insert sequence Length = 960 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 353 gtgatccagatgaggagctccttgctcttgaccccggt 390 |||| ||||||||||||||||||| |||||| ||||| Sbjct: 410 gtgacccagatgaggagctccttggccttgacgccggt 373
>dbj|AK105895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E12, full insert sequence Length = 1044 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 353 gtgatccagatgaggagctccttgctcttgaccccggt 390 |||| ||||||||||||||||||| |||||| ||||| Sbjct: 405 gtgacccagatgaggagctccttggccttgacgccggt 368
>dbj|AK069514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020B07, full insert sequence Length = 1046 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 353 gtgatccagatgaggagctccttgctcttgaccccggt 390 |||| ||||||||||||||||||| |||||| ||||| Sbjct: 411 gtgacccagatgaggagctccttggccttgacgccggt 374
>dbj|AK060891.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C01, full insert sequence Length = 1001 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 353 gtgatccagatgaggagctccttgctcttgaccccggt 390 |||| ||||||||||||||||||| |||||| ||||| Sbjct: 412 gtgacccagatgaggagctccttggccttgacgccggt 375
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 408 ggtcctcgacgaaggccgtcac 429 |||||||||||||||||||||| Sbjct: 850659 ggtcctcgacgaaggccgtcac 850680
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 575 gtctcggccagcagctccaccg 596 |||||||||||||||||||||| Sbjct: 3950643 gtctcggccagcagctccaccg 3950664
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 353 gtgatccagatgaggagctccttgctcttgaccccggt 390 |||| ||||||||||||||||||| |||||| ||||| Sbjct: 23077734 gtgacccagatgaggagctccttggccttgacgccggt 23077697
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 353 gtgatccagatgaggagctccttgctcttgaccccggt 390 |||| ||||||||||||||||||| |||||| ||||| Sbjct: 28854 gtgacccagatgaggagctccttggccttgacgccggt 28891
>ref|XM_653802.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1290.2), mRNA Length = 2652 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 gccttggcgtcgtccttcttc 256 ||||||||||||||||||||| Sbjct: 829 gccttggcgtcgtccttcttc 849
>ref|XM_547195.2| PREDICTED: Canis familiaris similar to abnormal CHEmotaxis family member (che-11) (LOC490075), mRNA Length = 3111 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 583 cagcagctccaccgccttctc 603 ||||||||||||||||||||| Sbjct: 2088 cagcagctccaccgccttctc 2068
>gb|AY358744.1| Homo sapiens clone DNA143514 LIN-7B (UNQ3116) mRNA, complete cds Length = 776 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 583 cagcagctccaccgccttctc 603 ||||||||||||||||||||| Sbjct: 524 cagcagctccaccgccttctc 504
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 653 tcgatcgcctgcgccatctcgactg 677 |||||||| |||||||||||||||| Sbjct: 2120777 tcgatcgcgtgcgccatctcgactg 2120753
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 cggccagcagctccaccgcct 599 ||||||||||||||||||||| Sbjct: 1175528 cggccagcagctccaccgcct 1175548
>gb|BC027618.2| Homo sapiens lin-7 homolog B (C. elegans), mRNA (cDNA clone MGC:27097 IMAGE:4830017), complete cds Length = 744 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 583 cagcagctccaccgccttctc 603 ||||||||||||||||||||| Sbjct: 498 cagcagctccaccgccttctc 478
>ref|NM_022165.2| Homo sapiens lin-7 homolog B (C. elegans) (LIN7B), mRNA Length = 755 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 583 cagcagctccaccgccttctc 603 ||||||||||||||||||||| Sbjct: 524 cagcagctccaccgccttctc 504
>gb|AF311862.1| Homo sapiens Lin-7b mRNA, complete cds Length = 754 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 583 cagcagctccaccgccttctc 603 ||||||||||||||||||||| Sbjct: 502 cagcagctccaccgccttctc 482
>gb|AC008687.5| Homo sapiens chromosome 19 clone CTB-60B18, complete sequence Length = 157633 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 583 cagcagctccaccgccttctc 603 ||||||||||||||||||||| Sbjct: 129204 cagcagctccaccgccttctc 129184
>gb|AY785777.1| Crithidia deanei paraflagellar rod protein (PFR1) mRNA, complete cds Length = 2081 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 583 cagcagctccaccgccttctc 603 ||||||||||||||||||||| Sbjct: 239 cagcagctccaccgccttctc 219
>gb|AY112303.1| Zea mays CL26549_1 mRNA sequence Length = 842 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 accccggtcatgcgcttcatc 403 ||||||||||||||||||||| Sbjct: 424 accccggtcatgcgcttcatc 444
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 577 ctcggccagcagctccaccgccttc 601 |||||||| |||||||||||||||| Sbjct: 3988283 ctcggccaccagctccaccgccttc 3988259 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 545 gccagcggcagcaggcccagcggc 568 ||||||| |||||||||||||||| Sbjct: 1331065 gccagcgccagcaggcccagcggc 1331042 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 545 gccagcggcagcaggcccagcggc 568 ||||||| |||||||||||||||| Sbjct: 167930 gccagcgccagcaggcccagcggc 167907
>ref|NM_197599.1| Oryza sativa (japonica cultivar-group) mucin-like protein (OSJNBb0015I11.17), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 578 tcggccagcagctccaccgccttctccg 605 |||| |||||||||||||||||| |||| Sbjct: 431 tcggtcagcagctccaccgccttgtccg 404
>ref|NM_197370.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0076F20.19), mRNA Length = 411 Score = 40.1 bits (20), Expect = 9.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 386 ccggtcatgcgcttcatcttgcggtcctcgacgaaggccgtcacctcg 433 |||||||| ||||||||| | | ||||| ||||| |||||||||||| Sbjct: 173 ccggtcatccgcttcatcctcccttcctccacgaacgccgtcacctcg 126
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 acagcgccgcgccgtggtac 628 |||||||||||||||||||| Sbjct: 2397670 acagcgccgcgccgtggtac 2397651
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 tgcggtcctcgacgaaggcc 424 |||||||||||||||||||| Sbjct: 891827 tgcggtcctcgacgaaggcc 891846
>ref|XM_542174.1| PREDICTED: Canis familiaris similar to thromboxane A2 receptor isoform 2 (LOC485056), mRNA Length = 1032 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 cagcggcagcaggcccagcg 566 |||||||||||||||||||| Sbjct: 504 cagcggcagcaggcccagcg 485
>gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome 10, complete sequence Length = 214405 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tggactcgagaactcttcat 151 |||||||||||||||||||| Sbjct: 112329 tggactcgagaactcttcat 112310
>ref|XM_724269.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01580) partial mRNA Length = 4593 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 aaacagattatagaagatagtaat 116 ||||||| |||||||||||||||| Sbjct: 4243 aaacagaatatagaagatagtaat 4266
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 666 ccatctcgactggttgaatc 685 |||||||||||||||||||| Sbjct: 4294156 ccatctcgactggttgaatc 4294137
>ref|XM_505045.1| Yarrowia lipolytica CLIB122, YALI0F05720g predicted mRNA Length = 366 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 ggccgtcacctcggtggcgt 440 |||||||||||||||||||| Sbjct: 261 ggccgtcacctcggtggcgt 280
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 tcttgcggtcctcgacgaaggccg 425 |||||| ||||||||||||||||| Sbjct: 503496 tcttgcagtcctcgacgaaggccg 503519
>emb|AL034373.13|HS424L16 Human DNA sequence from clone RP3-424L16 on chromosome 6q12-13 Contains part of the RAB3IP2 gene for RAB3 interacting protein 2, complete sequence Length = 107484 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 atgaggagctccttgctctt 381 |||||||||||||||||||| Sbjct: 75436 atgaggagctccttgctctt 75417
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 tgcggtcctcgacgaaggcc 424 |||||||||||||||||||| Sbjct: 207645 tgcggtcctcgacgaaggcc 207664
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 cagcggcagcaggcccagcg 566 |||||||||||||||||||| Sbjct: 139269 cagcggcagcaggcccagcg 139250
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 tgcggtcctcgacgaaggcc 424 |||||||||||||||||||| Sbjct: 225748 tgcggtcctcgacgaaggcc 225767
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 gccttggcgtcgtccttcttctcg 259 |||| ||||||||||||||||||| Sbjct: 143293 gcctcggcgtcgtccttcttctcg 143270
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 583 cagcagctccaccgccttctccgcgcacagcg 614 ||||||||||||||||| ||||| || ||||| Sbjct: 65260 cagcagctccaccgcctcctccgtgcccagcg 65229
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 cacctcggtggcgtacgaga 446 |||||||||||||||||||| Sbjct: 208960 cacctcggtggcgtacgaga 208979
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cttgcggtcctcgacgaagg 422 |||||||||||||||||||| Sbjct: 3456706 cttgcggtcctcgacgaagg 3456725
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 cggcagcaggcccagcggca 569 |||||||||||||||||||| Sbjct: 900421 cggcagcaggcccagcggca 900402
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 578 tcggccagcagctccaccgccttctccg 605 |||| |||||||||||||||||| |||| Sbjct: 107661 tcggtcagcagctccaccgccttgtccg 107634
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 40.1 bits (20), Expect = 9.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 386 ccggtcatgcgcttcatcttgcggtcctcgacgaaggccgtcacctcg 433 |||||||| ||||||||| | | ||||| ||||| |||||||||||| Sbjct: 131684 ccggtcatccgcttcatcctcccttcctccacgaacgccgtcacctcg 131731
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 534 cctccatgtccgccagcggcagca 557 ||||||||||| |||||||||||| Sbjct: 262257 cctccatgtccaccagcggcagca 262234
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 578 tcggccagcagctccaccgccttctccg 605 |||| |||||||||||||||||| |||| Sbjct: 20706209 tcggtcagcagctccaccgccttgtccg 20706182 Score = 40.1 bits (20), Expect = 9.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 386 ccggtcatgcgcttcatcttgcggtcctcgacgaaggccgtcacctcg 433 |||||||| ||||||||| | | ||||| ||||| |||||||||||| Sbjct: 19503818 ccggtcatccgcttcatcctcccttcctccacgaacgccgtcacctcg 19503865
>gb|AY833361.1| Cottus poecilopus volki cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1073 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ttggcgtcgtccttcttctc 258 |||||||||||||||||||| Sbjct: 277 ttggcgtcgtccttcttctc 296
>dbj|AB022529.2| Homo sapiens APCL gene, complete cds Length = 17008 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gtagcccacctcctccatgt 542 |||||||||||||||||||| Sbjct: 569 gtagcccacctcctccatgt 550
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 gctccaccgccttctccgcg 607 |||||||||||||||||||| Sbjct: 2715030 gctccaccgccttctccgcg 2715011
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 584 agcagctccaccgccttctccgcg 607 ||||||||| |||||||||||||| Sbjct: 1589486 agcagctcccccgccttctccgcg 1589463
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 ccgcgcacagcgccgcgccg 622 |||||||||||||||||||| Sbjct: 21402 ccgcgcacagcgccgcgccg 21383
>dbj|AK119742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-G05, full insert sequence Length = 3764 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 ccttgtcgatgaacatgtcg 346 |||||||||||||||||||| Sbjct: 408 ccttgtcgatgaacatgtcg 389
>emb|Y12820.1|MTY12820 Mycobacterium tuberculosis cfp29 gene Length = 1100 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 tgcggtcctcgacgaaggcc 424 |||||||||||||||||||| Sbjct: 539 tgcggtcctcgacgaaggcc 520
>emb|Y13470.1|MTY13470 Mycobacterium tuberculosis gene encoding mercuric reductase/glutathione reductase/dihydrolipoamide dehydrogenase and insertion element IS1547 Length = 3627 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 tgcggtcctcgacgaaggcc 424 |||||||||||||||||||| Sbjct: 3524 tgcggtcctcgacgaaggcc 3543
>dbj|AK106264.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F10, full insert sequence Length = 1488 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 578 tcggccagcagctccaccgccttctccg 605 |||| |||||||||||||||||| |||| Sbjct: 107 tcggtcagcagctccaccgccttgtccg 80
>ref|NM_208699.1| Eremothecium gossypii ACL058Wp (ACL058W), mRNA Length = 2454 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 534 cctccatgtccgccagcggcagca 557 ||||||||||| |||||||||||| Sbjct: 535 cctccatgtccaccagcggcagca 512
>gb|AF034101.2|AF034101 Streptomyces coelicolor ribosomal protein S2 (rpsB) and elongation factor Ts (tsf) genes, complete cds Length = 2162 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 gccttggcgtcgtccttcttctcg 259 |||| ||||||||||||||||||| Sbjct: 991 gcctcggcgtcgtccttcttctcg 968
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 578 tcggccagcagctccaccgccttctccg 605 |||| |||||||||||||||||| |||| Sbjct: 20717481 tcggtcagcagctccaccgccttgtccg 20717454 Score = 40.1 bits (20), Expect = 9.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 386 ccggtcatgcgcttcatcttgcggtcctcgacgaaggccgtcacctcg 433 |||||||| ||||||||| | | ||||| ||||| |||||||||||| Sbjct: 19515094 ccggtcatccgcttcatcctcccttcctccacgaacgccgtcacctcg 19515141
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 ggccgtcacctcggtggcgt 440 |||||||||||||||||||| Sbjct: 850941 ggccgtcacctcggtggcgt 850960
>gb|AC090053.5| Leishmania major strain Friedlin chromosome Unknown clone P323, complete sequence Length = 66637 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 gccagcggcagcaggcccag 564 |||||||||||||||||||| Sbjct: 11321 gccagcggcagcaggcccag 11302 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,506,150 Number of Sequences: 3902068 Number of extensions: 4506150 Number of successful extensions: 91924 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89289 Number of HSP's gapped (non-prelim): 2635 length of query: 700 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 677 effective length of database: 17,143,297,704 effective search space: 11606012545608 effective search space used: 11606012545608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)