ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14e14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome... 161 3e-36
2gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome... 161 3e-36
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
4dbj|AK101942.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
5dbj|AK059122.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
6ref|XM_475398.1| Oryza sativa (japonica cultivar-group), predic... 159 1e-35
7ref|NM_190453.1| Oryza sativa (japonica cultivar-group), predic... 100 1e-17
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
9dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
10dbj|AK058494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
11gb|AY110715.1| Zea mays CL38080_2 mRNA sequence 100 1e-17
12gb|AY108923.1| Zea mays PCO124519 mRNA sequence 70 9e-09
13ref|NM_115613.3| Arabidopsis thaliana CPK32; ATP binding / calci... 58 4e-05
14gb|BT013737.1| Lycopersicon esculentum clone 132598F, mRNA sequence 58 4e-05
15gb|BT012274.1| Arabidopsis thaliana At3g57530 gene, complete cds 58 4e-05
16gb|BT011630.1| Arabidopsis thaliana At3g57530 mRNA, complete cds 58 4e-05
17emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BA... 58 4e-05
18emb|BX822805.1|CNS0A743 Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
19ref|NM_115044.3| Arabidopsis thaliana CPK13; ATP binding / calci... 52 0.002
20gb|AY062539.1| Arabidopsis thaliana calcium-dependent protein ki... 52 0.002
21dbj|AK220740.1| Arabidopsis thaliana mRNA for calcium-dependent ... 52 0.002
22emb|BX824980.1|CNS0A4QL Arabidopsis thaliana Full-length cDNA Co... 52 0.002
23gb|BT003367.1| Arabidopsis thaliana calcium-dependent protein ki... 52 0.002
24gb|AF049236.1|AF049236 Arabidopsis thaliana putative transmembra... 52 0.002
25gb|U54615.1|ATU54615 Arabidopsis thaliana calcium-dependent prot... 52 0.002
26ref|XM_640151.1| Dictyostelium discoideum actin capping protein ... 44 0.54
27gb|AC116963.2| Dictyostelium discoideum chromosome 2 map 4657875... 44 0.54
28gb|AC092723.3| Homo sapiens chromosome 16 clone RP11-542M13, com... 44 0.54
29gb|M25132.1|DDICAP34A D.discoideum CAP34 protein, complete cds 44 0.54
30gb|AC012446.4| Homo sapiens BAC clone RP11-101A12 from 2, comple... 42 2.1
31dbj|AP007291.1| Lotus japonicus genomic DNA, clone:LjT06A03, TM0... 42 2.1
32dbj|AP006432.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 2.1
33gb|AC092212.32| Trypanosoma brucei chromosome 8 clone RPCI93-10J... 40 8.4
34gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 40 8.4
35gb|AC119166.16| Mus musculus chromosome 1, clone RP24-393L8, com... 40 8.4
36gb|AC024239.7| Homo sapiens BAC clone RP11-419K23 from 7, comple... 40 8.4
37ref|XM_817965.1| Trypanosoma brucei TREU927 hypothetical protein... 40 8.4
38ref|XM_774563.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 8.4
39gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete se... 40 8.4
40emb|AL607028.14| Human DNA sequence from clone RP11-25G10 on chr... 40 8.4
41emb|AL359697.23| Human DNA sequence from clone RP11-399C16 on ch... 40 8.4
42gb|AC117509.9| Homo sapiens 3 BAC RP11-31B16 (Roswell Park Cance... 40 8.4
43gb|AC157799.3| Mus musculus chromosome 1, clone RP24-154L11, com... 40 8.4
44gb|AC087358.9| Homo sapiens chromosome 8, clone RP11-442A17, com... 40 8.4
45emb|BX469922.12| Zebrafish DNA sequence from clone DKEY-30N5 in ... 40 8.4
46gb|AC091554.5| Homo sapiens chromosome 8, clone RP11-155P23, com... 40 8.4
47gb|AC006946.20| Homo sapiens Chromosome 22q11 Pac Clone p109l3 i... 40 8.4
48gb|AC121887.4| Mus musculus BAC clone RP24-142B15 from 5, comple... 40 8.4
49emb|CT030240.7| Mouse DNA sequence from clone RP23-26N21 on chro... 40 8.4
50emb|Z95620.1|SPBC3D6 S.pombe chromosome II cosmid c3D6 40 8.4 
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21,
              complete sequence
          Length = 153214

 Score =  161 bits (81), Expect = 3e-36
 Identities = 120/133 (90%)
 Strand = Plus / Plus

                                                                          
Query: 483    ttcactcgtttcccatctttacagatccatccttgataagccttatgctaaggctgttga 542
              |||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 129701 ttcactcgttgcccaattttacagatccatcctttataagccttatgctaaggctgttga 129760

                                                                          
Query: 543    aacgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttcatcattg 602
              |||||||||| ||||||||||| || ||||||| ||| |||||||| || ||||||||||
Sbjct: 129761 aacgtcctcttgaataatgccgtgacgcctttctccaatctgtgccagtcttcatcattg 129820

                           
Query: 603    ctacaaactcttc 615
              |||| || |||||
Sbjct: 129821 ctacgaattcttc 129833



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/76 (88%), Gaps = 2/76 (2%)
 Strand = Plus / Plus

                                                                          
Query: 365    ctatctaaatttccgccaaaataatcattagagaaggaaagagggtctctgcttagtggg 424
              ||||||||||| || ||||||||||||||||| ||||  ||| |||||||||||||||||
Sbjct: 129578 ctatctaaattaccaccaaaataatcattagaaaagg--agaaggtctctgcttagtggg 129635

                              
Query: 425    gccaatggccggactt 440
               |||| |||| |||||
Sbjct: 129636 tccaagggccagactt 129651



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 301    gataccgggaaagctacttacacgagtaagccaatcagg 339
              |||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 129520 gataccaggaaaactacttacatgagtaagccaatcagg 129558
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>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08,
             complete sequence
          Length = 141535

 Score =  161 bits (81), Expect = 3e-36
 Identities = 120/133 (90%)
 Strand = Plus / Plus

                                                                         
Query: 483   ttcactcgtttcccatctttacagatccatccttgataagccttatgctaaggctgttga 542
             |||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 83952 ttcactcgttgcccaattttacagatccatcctttataagccttatgctaaggctgttga 84011

                                                                         
Query: 543   aacgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttcatcattg 602
             |||||||||| ||||||||||| || ||||||| ||| |||||||| || ||||||||||
Sbjct: 84012 aacgtcctcttgaataatgccgtgacgcctttctccaatctgtgccagtcttcatcattg 84071

                          
Query: 603   ctacaaactcttc 615
             |||| || |||||
Sbjct: 84072 ctacgaattcttc 84084



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/76 (88%), Gaps = 2/76 (2%)
 Strand = Plus / Plus

                                                                         
Query: 365   ctatctaaatttccgccaaaataatcattagagaaggaaagagggtctctgcttagtggg 424
             ||||||||||| || ||||||||||||||||| ||||  ||| |||||||||||||||||
Sbjct: 83829 ctatctaaattaccaccaaaataatcattagaaaagg--agaaggtctctgcttagtggg 83886

                             
Query: 425   gccaatggccggactt 440
              |||| |||| |||||
Sbjct: 83887 tccaagggccagactt 83902



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 301   gataccgggaaagctacttacacgagtaagccaatcagg 339
             |||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 83771 gataccaggaaaactacttacatgagtaagccaatcagg 83809
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  161 bits (81), Expect = 3e-36
 Identities = 120/133 (90%)
 Strand = Plus / Plus

                                                                            
Query: 483      ttcactcgtttcccatctttacagatccatccttgataagccttatgctaaggctgttga 542
                |||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 22774502 ttcactcgttgcccaattttacagatccatcctttataagccttatgctaaggctgttga 22774561

                                                                            
Query: 543      aacgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttcatcattg 602
                |||||||||| ||||||||||| || ||||||| ||| |||||||| || ||||||||||
Sbjct: 22774562 aacgtcctcttgaataatgccgtgacgcctttctccaatctgtgccagtcttcatcattg 22774621

                             
Query: 603      ctacaaactcttc 615
                |||| || |||||
Sbjct: 22774622 ctacgaattcttc 22774634



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/76 (88%), Gaps = 2/76 (2%)
 Strand = Plus / Plus

                                                                            
Query: 365      ctatctaaatttccgccaaaataatcattagagaaggaaagagggtctctgcttagtggg 424
                ||||||||||| || ||||||||||||||||| ||||  ||| |||||||||||||||||
Sbjct: 22774379 ctatctaaattaccaccaaaataatcattagaaaagg--agaaggtctctgcttagtggg 22774436

                                
Query: 425      gccaatggccggactt 440
                 |||| |||| |||||
Sbjct: 22774437 tccaagggccagactt 22774452



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 301      gataccgggaaagctacttacacgagtaagccaatcagg 339
                |||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 22774321 gataccaggaaaactacttacatgagtaagccaatcagg 22774359
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>dbj|AK101942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074I19, full
            insert sequence
          Length = 2127

 Score =  161 bits (81), Expect = 3e-36
 Identities = 120/133 (90%)
 Strand = Plus / Minus

                                                                        
Query: 483  ttcactcgtttcccatctttacagatccatccttgataagccttatgctaaggctgttga 542
            |||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1820 ttcactcgttgcccaattttacagatccatcctttataagccttatgctaaggctgttga 1761

                                                                        
Query: 543  aacgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttcatcattg 602
            |||||||||| ||||||||||| || ||||||| ||| |||||||| || ||||||||||
Sbjct: 1760 aacgtcctcttgaataatgccgtgacgcctttctccaatctgtgccagtcttcatcattg 1701

                         
Query: 603  ctacaaactcttc 615
            |||| || |||||
Sbjct: 1700 ctacgaattcttc 1688



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/61 (88%), Gaps = 2/61 (3%)
 Strand = Plus / Minus

                                                                        
Query: 380  ccaaaataatcattagagaaggaaagagggtctctgcttagtggggccaatggccggact 439
            ||||||||||||||||| |||||  || ||||||||||||||||| |||| |||| ||||
Sbjct: 1928 ccaaaataatcattagaaaagga--gaaggtctctgcttagtgggtccaagggccagact 1871

             
Query: 440  t 440
            |
Sbjct: 1870 t 1870



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 301  gataccgggaaagctacttacacgagtaagccaatcagg 339
            |||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 1997 gataccaggaaaactacttacatgagtaagccaatcagg 1959
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>dbj|AK059122.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F07, full
           insert sequence
          Length = 582

 Score =  161 bits (81), Expect = 3e-36
 Identities = 120/133 (90%)
 Strand = Plus / Minus

                                                                       
Query: 483 ttcactcgtttcccatctttacagatccatccttgataagccttatgctaaggctgttga 542
           |||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 342 ttcactcgttgcccaattttacagatccatcctttataagccttatgctaaggctgttga 283

                                                                       
Query: 543 aacgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttcatcattg 602
           |||||||||| ||||||||||| || ||||||| ||| |||||||| || ||||||||||
Sbjct: 282 aacgtcctcttgaataatgccgtgacgcctttctccaatctgtgccagtcttcatcattg 223

                        
Query: 603 ctacaaactcttc 615
           |||| || |||||
Sbjct: 222 ctacgaattcttc 210



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/76 (88%), Gaps = 2/76 (2%)
 Strand = Plus / Minus

                                                                       
Query: 365 ctatctaaatttccgccaaaataatcattagagaaggaaagagggtctctgcttagtggg 424
           ||||||||||| || ||||||||||||||||| ||||  ||| |||||||||||||||||
Sbjct: 465 ctatctaaattaccaccaaaataatcattagaaaagg--agaaggtctctgcttagtggg 408

                           
Query: 425 gccaatggccggactt 440
            |||| |||| |||||
Sbjct: 407 tccaagggccagactt 392



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 301 gataccgggaaagctacttacacgagtaagccaatcagg 339
           |||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 523 gataccaggaaaactacttacatgagtaagccaatcagg 485
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>ref|XM_475398.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1644

 Score =  159 bits (80), Expect = 1e-35
 Identities = 119/132 (90%)
 Strand = Plus / Minus

                                                                        
Query: 484  tcactcgtttcccatctttacagatccatccttgataagccttatgctaaggctgttgaa 543
            ||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1644 tcactcgttgcccaattttacagatccatcctttataagccttatgctaaggctgttgaa 1585

                                                                        
Query: 544  acgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttcatcattgc 603
            ||||||||| ||||||||||| || ||||||| ||| |||||||| || |||||||||||
Sbjct: 1584 acgtcctcttgaataatgccgtgacgcctttctccaatctgtgccagtcttcatcattgc 1525

                        
Query: 604  tacaaactcttc 615
            ||| || |||||
Sbjct: 1524 tacgaattcttc 1513
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>ref|NM_190453.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1656

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                        
Query: 500  tttacagatccatccttgataagccttatgctaaggctgttgaaacgtcctctcgaataa 559
            ||||| || |||||||| |||||| | ||||||||||||||||| | |||||| || |||
Sbjct: 1640 tttacggacccatcctttataagcttcatgctaaggctgttgaatcttcctctagagtaa 1581

                                                              
Query: 560  tgccgcgaagcctttcgccagtctgtgcctgttttcatcattgctacaaa 609
            ||||| || ||||||| ||| |||||||| || |||||||||||||||||
Sbjct: 1580 tgccgggacgcctttctccaatctgtgcccgtcttcatcattgctacaaa 1531
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                            
Query: 500      tttacagatccatccttgataagccttatgctaaggctgttgaaacgtcctctcgaataa 559
                ||||| || |||||||| |||||| | ||||||||||||||||| | |||||| || |||
Sbjct: 35618733 tttacggacccatcctttataagcttcatgctaaggctgttgaatcttcctctagagtaa 35618674

                                                                  
Query: 560      tgccgcgaagcctttcgccagtctgtgcctgttttcatcattgctacaaa 609
                ||||| || ||||||| ||| |||||||| || |||||||||||||||||
Sbjct: 35618673 tgccgggacgcctttctccaatctgtgcccgtcttcatcattgctacaaa 35618624



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 176      attgtacaacacttagcatcaggtac 201
                |||||||||||||| |||||||||||
Sbjct: 35618997 attgtacaacacttggcatcaggtac 35618972
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>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0460C04
          Length = 189043

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                         
Query: 500   tttacagatccatccttgataagccttatgctaaggctgttgaaacgtcctctcgaataa 559
             ||||| || |||||||| |||||| | ||||||||||||||||| | |||||| || |||
Sbjct: 22070 tttacggacccatcctttataagcttcatgctaaggctgttgaatcttcctctagagtaa 22011

                                                               
Query: 560   tgccgcgaagcctttcgccagtctgtgcctgttttcatcattgctacaaa 609
             ||||| || ||||||| ||| |||||||| || |||||||||||||||||
Sbjct: 22010 tgccgggacgcctttctccaatctgtgcccgtcttcatcattgctacaaa 21961



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 176   attgtacaacacttagcatcaggtac 201
             |||||||||||||| |||||||||||
Sbjct: 22334 attgtacaacacttggcatcaggtac 22309
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>dbj|AK058494.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-E06, full
            insert sequence
          Length = 1339

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                        
Query: 500  tttacagatccatccttgataagccttatgctaaggctgttgaaacgtcctctcgaataa 559
            ||||| || |||||||| |||||| | ||||||||||||||||| | |||||| || |||
Sbjct: 1106 tttacggacccatcctttataagcttcatgctaaggctgttgaatcttcctctagagtaa 1047

                                                              
Query: 560  tgccgcgaagcctttcgccagtctgtgcctgttttcatcattgctacaaa 609
            ||||| || ||||||| ||| |||||||| || |||||||||||||||||
Sbjct: 1046 tgccgggacgcctttctccaatctgtgcccgtcttcatcattgctacaaa 997
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>gb|AY110715.1| Zea mays CL38080_2 mRNA sequence
          Length = 708

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 107/126 (84%)
 Strand = Plus / Plus

                                                                       
Query: 484 tcactcgtttcccatctttacagatccatccttgataagccttatgctaaggctgttgaa 543
           ||||||| | |||| ||||||||| || || || || ||| ||||||||||||| |||||
Sbjct: 233 tcactcgctacccagctttacagacccgtcttttatcagctttatgctaaggctattgaa 292

                                                                       
Query: 544 acgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttcatcattgc 603
            || ||||||||||| |||||||| ||||| | |||||| ||||| ||||||||||| ||
Sbjct: 293 gcgccctctcgaatagtgccgcgatgccttcctccagtccgtgccagttttcatcatcgc 352

                 
Query: 604 tacaaa 609
           ||||||
Sbjct: 353 tacaaa 358
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>gb|AY108923.1| Zea mays PCO124519 mRNA sequence
          Length = 783

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 98/119 (82%)
 Strand = Plus / Minus

                                                                       
Query: 494 cccatctttacagatccatccttgataagccttatgctaaggctgttgaaacgtcctctc 553
           |||| |||||| || || ||||| |||||| | ||||| ||||||||||| |  ||||||
Sbjct: 441 cccagctttaccgacccgtcctttataagcttcatgctgaggctgttgaacctccctctc 382

                                                                      
Query: 554 gaataatgccgcgaagcctttcgccagtctgtgcctgttttcatcattgctacaaactc 612
           || || ||||| || ||||||| |||||| ||||| || |||||||| || ||||||||
Sbjct: 381 gagtagtgccgggacgcctttctccagtccgtgccggtcttcatcatcgccacaaactc 323
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>ref|NM_115613.3| Arabidopsis thaliana CPK32; ATP binding / calcium ion binding /
            calcium- and calmodulin-dependent protein kinase/ kinase/
            protein kinase/ protein se> AT3G57530 (CPK32) mRNA,
            complete cds
          Length = 2201

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 536  ctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttc 595
            ||||| || ||| ||||||| || || | |||||| |||| ||| ||||| |||||||||
Sbjct: 1799 ctgttaaaccgttctctcgagtactgtctcgaagcttttctccaatctgttcctgttttc 1740

                                 
Query: 596  atcattgctacaaactcttcg 616
            ||||| | |||||||||||||
Sbjct: 1739 atcatcgttacaaactcttcg 1719
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>gb|BT013737.1| Lycopersicon esculentum clone 132598F, mRNA sequence
          Length = 2205

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                        
Query: 548  cctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttcatcattgctaca 607
            ||||| |||||||| || || ||||||| ||||||||| || ||||||||||| ||| ||
Sbjct: 1702 cctcttgaataatgtcgagatgcctttctccagtctgtcccagttttcatcatggctgca 1643

                         
Query: 608  aactcttcgaagc 620
            || ||||| ||||
Sbjct: 1642 aattcttcaaagc 1630
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>gb|BT012274.1| Arabidopsis thaliana At3g57530 gene, complete cds
          Length = 1617

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 536  ctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttc 595
            ||||| || ||| ||||||| || || | |||||| |||| ||| ||||| |||||||||
Sbjct: 1559 ctgttaaaccgttctctcgagtactgtctcgaagcttttctccaatctgttcctgttttc 1500

                                 
Query: 596  atcattgctacaaactcttcg 616
            ||||| | |||||||||||||
Sbjct: 1499 atcatcgttacaaactcttcg 1479
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>gb|BT011630.1| Arabidopsis thaliana At3g57530 mRNA, complete cds
          Length = 1700

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 536  ctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttc 595
            ||||| || ||| ||||||| || || | |||||| |||| ||| ||||| |||||||||
Sbjct: 1613 ctgttaaaccgttctctcgagtactgtctcgaagcttttctccaatctgttcctgttttc 1554

                                 
Query: 596  atcattgctacaaactcttcg 616
            ||||| | |||||||||||||
Sbjct: 1553 atcatcgttacaaactcttcg 1533
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>emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10
          Length = 87503

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                         
Query: 536   ctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttc 595
             ||||| || ||| ||||||| || || | |||||| |||| ||| ||||| |||||||||
Sbjct: 50792 ctgttaaaccgttctctcgagtactgtctcgaagcttttctccaatctgttcctgttttc 50851

                                  
Query: 596   atcattgctacaaactcttcg 616
             ||||| | |||||||||||||
Sbjct: 50852 atcatcgttacaaactcttcg 50872
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>emb|BX822805.1|CNS0A743 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB65ZB09 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1963

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 536  ctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtgcctgttttc 595
            ||||| || ||| ||||||| || || | |||||| |||| ||| ||||| |||||||||
Sbjct: 1651 ctgttaaaccgttctctcgagtactgtctcgaagcttttctccaatctgttcctgttttc 1592

                                 
Query: 596  atcattgctacaaactcttcg 616
            ||||| | |||||||||||||
Sbjct: 1591 atcatcgttacaaactcttcg 1571
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>ref|NM_115044.3| Arabidopsis thaliana CPK13; ATP binding / calcium ion binding /
            calcium- and calmodulin-dependent protein kinase/ kinase/
            protein kinase/ protein se> AT3G51850 (CPK13) mRNA,
            complete cds
          Length = 2146

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                        
Query: 527  atgctaaggctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtg 586
            ||||| ||||| ||||| |  ||||| || ||||| || || ||||||| ||| || || 
Sbjct: 1744 atgcttaggctattgaatctccctcttgagtaatgacgagacgcctttctccaatccgtt 1685

                                          
Query: 587  cctgttttcatcattgctacaaactcttcg 616
            |||||||||||||||||  |||||||||||
Sbjct: 1684 cctgttttcatcattgccgcaaactcttcg 1655
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>gb|AY062539.1| Arabidopsis thaliana calcium-dependent protein kinase (At3g51850)
            mRNA, complete cds
          Length = 2086

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                        
Query: 527  atgctaaggctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtg 586
            ||||| ||||| ||||| |  ||||| || ||||| || || ||||||| ||| || || 
Sbjct: 1744 atgcttaggctattgaatctccctcttgagtaatgacgagacgcctttctccaatccgtt 1685

                                          
Query: 587  cctgttttcatcattgctacaaactcttcg 616
            |||||||||||||||||  |||||||||||
Sbjct: 1684 cctgttttcatcattgccgcaaactcttcg 1655
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>dbj|AK220740.1| Arabidopsis thaliana mRNA for calcium-dependent like protein
           kinase, partial cds, clone: RAFL22-12-N17
          Length = 674

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 527 atgctaaggctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtg 586
           ||||| ||||| ||||| |  ||||| || ||||| || || ||||||| ||| || || 
Sbjct: 295 atgcttaggctattgaatctccctcttgagtaatgacgagacgcctttctccaatccgtt 236

                                         
Query: 587 cctgttttcatcattgctacaaactcttcg 616
           |||||||||||||||||  |||||||||||
Sbjct: 235 cctgttttcatcattgccgcaaactcttcg 206
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>emb|BX824980.1|CNS0A4QL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH87ZB07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1964

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                        
Query: 527  atgctaaggctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtg 586
            ||||| ||||| ||||| |  ||||| || ||||| || || ||||||| ||| || || 
Sbjct: 1732 atgcttaggctattgaatctccctcttgagtaatgacgagacgcctttctccaatccgtt 1673

                                          
Query: 587  cctgttttcatcattgctacaaactcttcg 616
            |||||||||||||||||  |||||||||||
Sbjct: 1672 cctgttttcatcattgccgcaaactcttcg 1643
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>gb|BT003367.1| Arabidopsis thaliana calcium-dependent protein kinase (At3g51850)
            mRNA, complete cds
          Length = 1884

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                        
Query: 527  atgctaaggctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtg 586
            ||||| ||||| ||||| |  ||||| || ||||| || || ||||||| ||| || || 
Sbjct: 1544 atgcttaggctattgaatctccctcttgagtaatgacgagacgcctttctccaatccgtt 1485

                                          
Query: 587  cctgttttcatcattgctacaaactcttcg 616
            |||||||||||||||||  |||||||||||
Sbjct: 1484 cctgttttcatcattgccgcaaactcttcg 1455
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>gb|AF049236.1|AF049236 Arabidopsis thaliana putative transmembrane protein G1p (AtG1),
             putative nuclear DNA-binding protein G2p (AtG2), Em1
             protein (ATEM1), putative chlorophyll synthetase (AtG4),
             putative transmembrane protein G5p (AtG5), putative
             acyl-coA dehydrogenase (AtG6), and calcium dependent
             protein kinase genes, complete cds; and unknown genes
          Length = 60000

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                         
Query: 527   atgctaaggctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtg 586
             ||||| ||||| ||||| |  ||||| || ||||| || || ||||||| ||| || || 
Sbjct: 37862 atgcttaggctattgaatctccctcttgagtaatgacgagacgcctttctccaatccgtt 37803

                                           
Query: 587   cctgttttcatcattgctacaaactcttcg 616
             |||||||||||||||||  |||||||||||
Sbjct: 37802 cctgttttcatcattgccgcaaactcttcg 37773
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>gb|U54615.1|ATU54615 Arabidopsis thaliana calcium-dependent protein kinase gene, complete
            cds
          Length = 4146

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                        
Query: 527  atgctaaggctgttgaaacgtcctctcgaataatgccgcgaagcctttcgccagtctgtg 586
            ||||| ||||| ||||| |  ||||| || ||||| || || ||||||| ||| || || 
Sbjct: 3300 atgcttaggctattgaatctccctcttgagtaatgacgagacgcctttctccaatccgtt 3241

                                          
Query: 587  cctgttttcatcattgctacaaactcttcg 616
            |||||||||||||||||  |||||||||||
Sbjct: 3240 cctgttttcatcattgccgcaaactcttcg 3211
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>ref|XM_640151.1| Dictyostelium discoideum actin capping protein (DDB0191243),
           partial mRNA
          Length = 846

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 160 gaagaagcaaccaaatattgta 181
           ||||||||||||||||||||||
Sbjct: 358 gaagaagcaaccaaatattgta 379
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>gb|AC116963.2| Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4,
             complete sequence
          Length = 257109

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 160   gaagaagcaaccaaatattgta 181
             ||||||||||||||||||||||
Sbjct: 58296 gaagaagcaaccaaatattgta 58317
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>gb|AC092723.3| Homo sapiens chromosome 16 clone RP11-542M13, complete sequence
          Length = 188458

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 585    tgcctgttttcatcattgctacaaactctt 614
              ||||||||||| ||||||||||||| ||||
Sbjct: 115358 tgcctgttttcctcattgctacaaaatctt 115329
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>gb|M25132.1|DDICAP34A D.discoideum CAP34 protein, complete cds
          Length = 1106

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 160 gaagaagcaaccaaatattgta 181
           ||||||||||||||||||||||
Sbjct: 496 gaagaagcaaccaaatattgta 517
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>gb|AC012446.4| Homo sapiens BAC clone RP11-101A12 from 2, complete sequence
          Length = 172749

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 387    aatcattagagaaggaaagag 407
              |||||||||||||||||||||
Sbjct: 104782 aatcattagagaaggaaagag 104762
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>dbj|AP007291.1| Lotus japonicus genomic DNA, clone:LjT06A03, TM0345, complete sequence
          Length = 89191

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 390   cattagagaaggaaagagggt 410
             |||||||||||||||||||||
Sbjct: 59325 cattagagaaggaaagagggt 59305
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>dbj|AP006432.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT14C18, TM0330,
             complete sequence
          Length = 109258

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 390   cattagagaaggaaagagggt 410
             |||||||||||||||||||||
Sbjct: 55849 cattagagaaggaaagagggt 55829
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>gb|AC092212.32| Trypanosoma brucei chromosome 8 clone RPCI93-10J17, complete sequence
          Length = 168741

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 387    aatcattagagaaggaaagagggt 410
              ||||||||||||||||||| ||||
Sbjct: 161542 aatcattagagaaggaaagggggt 161565
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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 387     aatcattagagaaggaaagagggt 410
               ||||||||||||||||||| ||||
Sbjct: 1067282 aatcattagagaaggaaagggggt 1067259
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>gb|AC119166.16| Mus musculus chromosome 1, clone RP24-393L8, complete sequence
          Length = 163121

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 394  agagaaggaaagagggtctc 413
            ||||||||||||||||||||
Sbjct: 8795 agagaaggaaagagggtctc 8776
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>gb|AC024239.7| Homo sapiens BAC clone RP11-419K23 from 7, complete sequence
          Length = 156658

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    tctgagagggaagaagcaac 170
              ||||||||||||||||||||
Sbjct: 148861 tctgagagggaagaagcaac 148880
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>ref|XM_817965.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.6k15.2280)
           partial mRNA
          Length = 1125

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 ggaagaagcaaccaaatatt 178
           ||||||||||||||||||||
Sbjct: 249 ggaagaagcaaccaaatatt 268
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>ref|XM_774563.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_574_14865_16751) partial mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 399 aggaaagagggtctctgctt 418
           ||||||||||||||||||||
Sbjct: 414 aggaaagagggtctctgctt 395
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>gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete sequence
          Length = 122694

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ctgtttcggtacagttgaaa 60
             ||||||||||||||||||||
Sbjct: 81123 ctgtttcggtacagttgaaa 81104
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>emb|AL607028.14| Human DNA sequence from clone RP11-25G10 on chromosome 10 Contains part
             of the gene for a novel protein (LOC221061) and a novel
             gene, complete sequence
          Length = 118158

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    ggcaatatgctgtttcggta 51
             ||||||||||||||||||||
Sbjct: 97979 ggcaatatgctgtttcggta 97998
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>emb|AL359697.23| Human DNA sequence from clone RP11-399C16 on chromosome 10 Contains the
              3' end of the MLLT10 gene for myeloid/lymphoid or
              mixed-lineage leukemia (trithorax homolog, Drosophila);
              translocated to, 10 (AF10), the 3' end of the DNAJC1 gene
              for DnaJ (Hsp40) homolog, subfamily C, member 1 (DNAJL1)
              and a CpG island, complete sequence
          Length = 171868

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 521    agccttatgctaaggctgtt 540
              ||||||||||||||||||||
Sbjct: 134431 agccttatgctaaggctgtt 134450
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>gb|AC117509.9| Homo sapiens 3 BAC RP11-31B16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 113201

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 376   tccgccaaaataatcattagagaa 399
             ||||||||||||| ||||||||||
Sbjct: 61402 tccgccaaaataaacattagagaa 61379
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>gb|AC157799.3| Mus musculus chromosome 1, clone RP24-154L11, complete sequence
          Length = 159548

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   agagaaggaaagagggtctc 413
             ||||||||||||||||||||
Sbjct: 29012 agagaaggaaagagggtctc 29031
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>gb|AC087358.9| Homo sapiens chromosome 8, clone RP11-442A17, complete sequence
          Length = 183097

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tttccttttggcaatatgct 42
             ||||||||||||||||||||
Sbjct: 57848 tttccttttggcaatatgct 57867
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>emb|BX469922.12| Zebrafish DNA sequence from clone DKEY-30N5 in linkage group 24, complete
              sequence
          Length = 200409

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 380    ccaaaataatcattagagaa 399
              ||||||||||||||||||||
Sbjct: 162919 ccaaaataatcattagagaa 162900
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>gb|AC091554.5| Homo sapiens chromosome 8, clone RP11-155P23, complete sequence
          Length = 149318

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     tttccttttggcaatatgct 42
              ||||||||||||||||||||
Sbjct: 122551 tttccttttggcaatatgct 122570
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>gb|AC006946.20| Homo sapiens Chromosome 22q11 Pac Clone p109l3 in CES region, complete
              sequence
          Length = 193159

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    gtgcgtgcccctcctcactc 297
              ||||||||||||||||||||
Sbjct: 121606 gtgcgtgcccctcctcactc 121625
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>gb|AC121887.4| Mus musculus BAC clone RP24-142B15 from 5, complete sequence
          Length = 234919

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 159    ggaagaagcaaccaaatatt 178
              ||||||||||||||||||||
Sbjct: 116828 ggaagaagcaaccaaatatt 116847
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>emb|CT030240.7| Mouse DNA sequence from clone RP23-26N21 on chromosome 13, complete
             sequence
          Length = 175209

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 517   gataagccttatgctaaggc 536
             ||||||||||||||||||||
Sbjct: 97566 gataagccttatgctaaggc 97585
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>emb|Z95620.1|SPBC3D6 S.pombe chromosome II cosmid c3D6
          Length = 32329

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 599   attgctacaaactcttcgaa 618
             ||||||||||||||||||||
Sbjct: 13109 attgctacaaactcttcgaa 13128


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,380,349
Number of Sequences: 3902068
Number of extensions: 4380349
Number of successful extensions: 78705
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78566
Number of HSP's gapped (non-prelim): 134
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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