ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13p06 |
|---|---|
| Clone Library Name | barley_pub |
>VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetative storage| protein A) Length = 254 Score = 153 bits (386), Expect = 4e-37 Identities = 78/147 (53%), Positives = 103/147 (70%), Gaps = 3/147 (2%) Frame = -1 Query: 565 IDETTLSNLPXYATHGFGARPYNATSFDAYVLEGSAPALPETKRLYYKLLKVGIKPVFIT 386 ID T LSN+P Y HG+G +N+T +D +V +G+APALPET + Y KL+ +G K +F++ Sbjct: 107 IDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLS 166 Query: 385 GRTEDKRAVTVGNLRSQGFSGWMNLTLK--QHGFKGSAISYKSAERKKLQDAGYVIVGNI 212 GRT DK+AVT NL+ G+ W L LK Q +A+SYK+A R+KL GY IVG I Sbjct: 167 GRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGII 226 Query: 211 GDQWSDILGAPEG-ARTFKLPDPIYYI 134 GDQWSD+LG G +RTFKLP+P+YYI Sbjct: 227 GDQWSDLLGGHRGESRTFKLPNPLYYI 253
>VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein B) Length = 254 Score = 151 bits (382), Expect = 1e-36 Identities = 80/146 (54%), Positives = 98/146 (67%), Gaps = 2/146 (1%) Frame = -1 Query: 565 IDETTLSNLPXYATHGFGARPYNATSFDAYVLEGSAPALPETKRLYYKLLKVGIKPVFIT 386 ID T LSN+P Y HG+G +N T +D +V +G APALPET + Y KLL +G K VF++ Sbjct: 108 IDNTVLSNIPYYEKHGYGVEEFNETLYDEWVNKGDAPALPETLKNYNKLLSLGFKIVFLS 167 Query: 385 GRTEDKRAVTVGNLRSQGFSGWMNLTLKQ-HGFKGSAISYKSAERKKLQDAGYVIVGNIG 209 GR DK AVT NL+ GF W L LK H +A+SYKSA R+ L GY IVG IG Sbjct: 168 GRYLDKMAVTEANLKKAGFHTWEQLILKDPHLITPNALSYKSAMRENLLRQGYRIVGIIG 227 Query: 208 DQWSDILGAPEG-ARTFKLPDPIYYI 134 DQWSD+LG G +RTFKLP+P+YYI Sbjct: 228 DQWSDLLGDHRGESRTFKLPNPMYYI 253
>S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein VSP25) (Fragment) Length = 291 Score = 145 bits (366), Expect = 8e-35 Identities = 75/143 (52%), Positives = 99/143 (69%), Gaps = 3/143 (2%) Frame = -1 Query: 565 IDETTLSNLPXYATHGFGARPYNATSFDAYVLEGSAPALPETKRLYYKLLKVGIKPVFIT 386 ID T LSN+P Y HG+G +N+T +D +V +G+APALPET + Y KL+ +G K +F++ Sbjct: 104 IDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLS 163 Query: 385 GRTEDKRAVTVGNLRSQGFSGWMNLTLK--QHGFKGSAISYKSAERKKLQDAGYVIVGNI 212 GRT DK+AVT NL+ G+ W L LK Q +A+SYK+A R+KL GY IVG I Sbjct: 164 GRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGII 223 Query: 211 GDQWSDILGAPEG-ARTFKLPDP 146 GDQWSD+LG G +RTFKLP+P Sbjct: 224 GDQWSDLLGGHRGESRTFKLPNP 246
>PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (Apase-1(1))| Length = 255 Score = 136 bits (343), Expect = 4e-32 Identities = 68/145 (46%), Positives = 95/145 (65%), Gaps = 1/145 (0%) Frame = -1 Query: 565 IDETTLSNLPXYATHGFGARPYNATSFDAYVLEGSAPALPETKRLYYKLLKVGIKPVFIT 386 +DET LSNLP Y+ H +G ++ FD +V G+APAL + +LY ++LK+G K +T Sbjct: 110 VDETLLSNLPYYSDHRYGLEVFDDVEFDKWVENGTAPALGSSLKLYQEVLKLGFKVFLLT 169 Query: 385 GRTEDKRAVTVGNLRSQGFSGWMNLTLKQHGFKG-SAISYKSAERKKLQDAGYVIVGNIG 209 GR+E R+VTV NL + GF W L L+ G +A +YKS R + + G+ IVGN G Sbjct: 170 GRSERHRSVTVENLMNAGFHDWHKLILRGSDDHGKTATTYKSERRNAMVEEGFRIVGNSG 229 Query: 208 DQWSDILGAPEGARTFKLPDPIYYI 134 DQWSD+LG+ R+FKLP+P+YYI Sbjct: 230 DQWSDLLGSSMSYRSFKLPNPMYYI 254
>VSP1_ARATH (O49195) Vegetative storage protein 1 precursor| Length = 270 Score = 120 bits (302), Expect = 2e-27 Identities = 61/145 (42%), Positives = 93/145 (64%), Gaps = 1/145 (0%) Frame = -1 Query: 565 IDETTLSNLPXYATHGFGARPYNATSFDAYVLEG-SAPALPETKRLYYKLLKVGIKPVFI 389 +D+T LS++P YA +G+G ++ +++ G S P LPET LY LL++GI+P+ I Sbjct: 125 LDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLLELGIEPIII 184 Query: 388 TGRTEDKRAVTVGNLRSQGFSGWMNLTLKQHGFKGSAISYKSAERKKLQDAGYVIVGNIG 209 + R + +T+ NL++ G + W +L LK +G K + + YKS R L GY IVGNIG Sbjct: 185 SDRWKKLSEITIENLKAVGVTKWKHLILKPNGSKLTQVVYKSKVRNSLVKKGYNIVGNIG 244 Query: 208 DQWSDILGAPEGARTFKLPDPIYYI 134 DQW+D++ G R FKLP+P+YY+ Sbjct: 245 DQWADLVEDTPG-RVFKLPNPLYYV 268
>VSP2_ARATH (O82122) Vegetative storage protein 2 precursor| Length = 265 Score = 114 bits (286), Expect = 1e-25 Identities = 58/145 (40%), Positives = 91/145 (62%), Gaps = 1/145 (0%) Frame = -1 Query: 565 IDETTLSNLPXYATHGFGARPYNATSFDAYVLEG-SAPALPETKRLYYKLLKVGIKPVFI 389 +D+T LS++P YA +G+G + ++ ++ G S P LPE LY ++++GI+P+ + Sbjct: 120 LDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNIIELGIEPIIL 179 Query: 388 TGRTEDKRAVTVGNLRSQGFSGWMNLTLKQHGFKGSAISYKSAERKKLQDAGYVIVGNIG 209 + R + + VT+ NL + G + W +L LK +G + YKS RK L GY IVGNIG Sbjct: 180 SDRWKLWKNVTLDNLEAAGVTYWKHLILKPNGSNLRQVVYKSKVRKSLVKKGYNIVGNIG 239 Query: 208 DQWSDILGAPEGARTFKLPDPIYYI 134 DQW+D++ G R FKLP+P+YY+ Sbjct: 240 DQWADLVEDTPG-RVFKLPNPLYYV 263
>HEL_HAEIN (P26093) Lipoprotein E precursor (Outer membrane protein P4) (OMP| P4) Length = 274 Score = 32.7 bits (73), Expect = 0.73 Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 1/125 (0%) Frame = -1 Query: 565 IDETTLSNLPXYATHGFGARPYNATSFDAYVLEGSAPALPETKRLYYKLLKVGIKPVFIT 386 +DET L N P +P++ + +V + A+P + K ++T Sbjct: 85 LDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVT 144 Query: 385 GRTED-KRAVTVGNLRSQGFSGWMNLTLKQHGFKGSAISYKSAERKKLQDAGYVIVGNIG 209 R + +++ T+ +++ GF+G K S K+A +++ GY IV +G Sbjct: 145 NRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDK----SAKAARFAEIEKQGYEIVLYVG 200 Query: 208 DQWSD 194 D D Sbjct: 201 DNLDD 205
>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor| (PRP-1/PRP-2) (Parotid proline-rich protein 1/2) (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa) (Parotid isoelectric focusing variant protein) (PIF-S) (Parotid double-band Length = 166 Score = 32.3 bits (72), Expect = 0.95 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = -3 Query: 416 QGGHQAGVHHRPDGG-QEGRHRREPPQPGLLRVDEPDAQAARIQG 285 QGGH RP G Q+G H++ PP P + P Q R QG Sbjct: 114 QGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQG 158
>AAD6_YEAST (P43547) Putative aryl-alcohol dehydrogenase AAD6 (EC 1.1.1.-)| Length = 212 Score = 30.8 bits (68), Expect = 2.8 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -1 Query: 217 NIGDQWSDILGAPEGARTFKLPDPIY 140 +IGD WS+ILG+ R F+L D Y Sbjct: 38 SIGDAWSEILGSMSKERAFELLDAFY 63
>SLT11_YEAST (P38241) Pre-mRNA-splicing factor SLT11 (Synthetic lethality with| U2 protein 11) (Extracellular matrix protein 2) Length = 364 Score = 29.6 bits (65), Expect = 6.1 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 2 QWIITDASSMQITITPWSIKRAWSLIIIRGARAWGNQMAAADLGD 136 +W ITD S + I W + SLI+ A+ G + +++LG+ Sbjct: 216 EWKITDTVSQLLGIKKWKDGNSLSLIVNHKAKCGGLRFQSSELGE 260
>YIEC_ECOLI (P26218) Putative outer membrane protein yieC precursor| Length = 538 Score = 29.3 bits (64), Expect = 8.0 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = -1 Query: 355 VGNLRSQG--FSGWMNLTLKQHGFKGSAISYKSAERKKLQDAGYVIVGNIGDQWS 197 +G+L G +SGW +L LKQ + E K DA ++ GN+G Q+S Sbjct: 148 IGSLGRFGNEYSGWFDLQLKQRVYN---------ENGKRVDAVVMMDGNVGQQYS 193 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,859,711 Number of Sequences: 219361 Number of extensions: 1257566 Number of successful extensions: 4158 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3949 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4143 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
