ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (... 392 e-106
2emb|X98582.1|TAX98582 T.aestivum mRNA for HSP80-2 protein 139 4e-30
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 64 2e-07
4dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic D... 64 2e-07
5dbj|AB111810.1| Oryza sativa (japonica cultivar-group) Hsp90 mRN... 64 2e-07
6emb|Z15018.1|OSHSP82G O.sativa hsp82 gene for heat shock protein 82 64 2e-07
7dbj|AK064780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 2e-07
8emb|Z11920.1|OSHSP82A O.sativa gene for heat shock protein 82 HSP82 58 1e-05
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 58 1e-05
10dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic D... 58 1e-05
11dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D... 58 1e-05
12dbj|AK102426.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 1e-05
13ref|XM_483191.1| Oryza sativa (japonica cultivar-group), mRNA 52 8e-04
14gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 52 8e-04
15gb|BT016606.1| Zea mays clone Contig439 mRNA sequence 52 8e-04
16dbj|AK061896.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
17dbj|D29709.1|RICYK21 Oryza sativa mRNA, partial homologous to he... 52 8e-04
18dbj|AK121906.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
19dbj|AK119663.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
20gb|BT024184.1| Zea mays clone EL01N0315D01 mRNA sequence 52 8e-04
21gb|AY110769.1| Zea mays CL1264_4 mRNA sequence 52 8e-04
22gb|AY105939.1| Zea mays PCO150588 mRNA sequence 52 8e-04
23gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRN... 50 0.003
24dbj|D21284.1|RICAD167 Oryza sativa AD167 mRNA for heat shock pro... 48 0.012
25gb|AY103538.1| Zea mays PCO150589 mRNA sequence 48 0.012
26gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence 46 0.046
27gb|AY109427.1| Zea mays CL1264_2 mRNA sequence 46 0.046
28emb|X67711.2|OSHSC70A O.sativa hsp70 gene for heat shock protein 70 44 0.18
29gb|S59780.1|S59780 Zea mays heat shock protein HSP82 (hsp82) gen... 44 0.18
30ref|NM_124642.2| Arabidopsis thaliana HSP81-1 (HEAT SHOCK PROTEI... 42 0.72
31emb|Y07613.1|ATHSP90A A.thaliana hsp90A gene 42 0.72
32gb|AY128296.1| Arabidopsis thaliana AT5g52640/F6N7_13 mRNA, comp... 42 0.72
33dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 0.72
34dbj|D00710.1|ATHHSP81 Arabidopsis thaliana HSP81-1 gene for 81kD... 42 0.72
35gb|M62984.1|ATHHSP83 A.thaliana heat shock protein 83 mRNA, comp... 42 0.72
36gb|AY344115.1| Toxoplasma gondii heat shock protein 90 mRNA, com... 40 2.9
37gb|AY292370.1| Toxoplasma gondii HSP90 mRNA, complete cds 40 2.9
38gb|BT001091.1| Arabidopsis thaliana At5g52640/F6N7_13 mRNA, comp... 40 2.9
39gb|AF521007.1| Hevea brasiliensis heat shock protein mRNA, compl... 40 2.9
40gb|AF421541.1| Crypthecodinium cohnii Hsp90 mRNA, complete cds 40 2.9
41gb|AF042329.1|AF042329 Eimeria tenella heat shock protein 90 (hs... 40 2.9
42emb|AJ937761.1| Uncultured beta proteobacterium fosmid clone b1b... 40 2.9 
>gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (HSP90) mRNA,
            complete cds
          Length = 2553

 Score =  392 bits (198), Expect = e-106
 Identities = 220/226 (97%), Gaps = 2/226 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ataaccgaactgttcn-cgagtaccacaaataagctaaccgcgcttaatgtttggcc-gc 58
            |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2345 ataaccgaactgttccacgagtaccacaaataagctaaccgcgcttaatgtttggccagc 2286

                                                                        
Query: 59   caaaagacaaaaccgatacagctaagacgtgccaaaaccatccaacgacgacactaagat 118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2285 caaaagacaaaaccgatacagctaagacgtgccaaaaccatccaacgacgacactaagat 2226

                                                                        
Query: 119  aaaagcaactagacggtgcagggcatggacatacgacgacgcgcagccttggcgcttagt 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2225 aaaagcaactagacggtgcagggcatggacatacgacgacgcgcagccttggcgcttagt 2166

                                                          
Query: 179  cgacctnctccatcttgctctcaccggcatnatcctncaggggcgg 224
            |||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 2165 cgacctcctccatcttgctctcaccggcatcatcctccaggggcgg 2120
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>emb|X98582.1|TAX98582 T.aestivum mRNA for HSP80-2 protein
          Length = 2378

 Score =  139 bits (70), Expect = 4e-30
 Identities = 116/131 (88%), Gaps = 1/131 (0%)
 Strand = Plus / Minus

                                                                        
Query: 95   accatccaacgacgacactaa-gataaaagcaactagacggtgcagggcatggacatacg 153
            ||||||||||| ||||||||| ||||||| ||||||| |||||||||||||| |||| ||
Sbjct: 2262 accatccaacgtcgacactaaagataaaaacaactaggcggtgcagggcatgaacatccg 2203

                                                                        
Query: 154  acgacgcgcagccttggcgcttagtcgacctnctccatcttgctctcaccggcatnatcc 213
            |||||  |||| ||||||||||||||||||| |||||||||||||||||| || |  |||
Sbjct: 2202 acgacaggcagacttggcgcttagtcgacctcctccatcttgctctcaccagcgtcgtcc 2143

                       
Query: 214  tncaggggcgg 224
            | |||||||||
Sbjct: 2142 tccaggggcgg 2132



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 71/77 (92%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                        
Query: 6    cgaactgttcn-cgagtaccacaaataagctaaccgcgcttaatgtttggcc-gccaaaa 63
            ||||||||||  ||||||||||||| | |||| ||||||||||||||||||| |||||||
Sbjct: 2339 cgaactgttccacgagtaccacaaaca-gctagccgcgcttaatgtttggccagccaaaa 2281

                             
Query: 64   gacaaaaccgatacagc 80
            |||||||||||||||||
Sbjct: 2280 gacaaaaccgatacagc 2264
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 168      tggcgcttagtcgacctnctccatcttgctctcaccggc 206
                ||||||||||||||||| ||||||||||||||| |||||
Sbjct: 18460303 tggcgcttagtcgacctcctccatcttgctctcgccggc 18460341



 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 174      ttagtcgacctnctccatcttgctctcaccggc 206
                ||||||||||| ||||||||||||||| |||||
Sbjct: 18482614 ttagtcgacctcctccatcttgctctcgccggc 18482646



 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 174      ttagtcgacctnctccatcttgctctcaccggc 206
                ||||||||||| ||||||||||||||| |||||
Sbjct: 18471155 ttagtcgacctcctccatcttgctctcgccggc 18471187
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>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0463D04
          Length = 145828

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 168    tggcgcttagtcgacctnctccatcttgctctcaccggc 206
              ||||||||||||||||| ||||||||||||||| |||||
Sbjct: 122177 tggcgcttagtcgacctcctccatcttgctctcgccggc 122215



 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 174    ttagtcgacctnctccatcttgctctcaccggc 206
              ||||||||||| ||||||||||||||| |||||
Sbjct: 144488 ttagtcgacctcctccatcttgctctcgccggc 144520



 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 174    ttagtcgacctnctccatcttgctctcaccggc 206
              ||||||||||| ||||||||||||||| |||||
Sbjct: 133029 ttagtcgacctcctccatcttgctctcgccggc 133061
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>dbj|AB111810.1| Oryza sativa (japonica cultivar-group) Hsp90 mRNA for heat shock
            protein 90, complete cds
          Length = 2408

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 168  tggcgcttagtcgacctnctccatcttgctctcaccggc 206
            ||||||||||||||||| ||||||||||||||| |||||
Sbjct: 2211 tggcgcttagtcgacctcctccatcttgctctcgccggc 2173
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>emb|Z15018.1|OSHSP82G O.sativa hsp82 gene for heat shock protein 82
          Length = 704

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 168 tggcgcttagtcgacctnctccatcttgctctcaccggc 206
           ||||||||||||||||| ||||||||||||||| |||||
Sbjct: 271 tggcgcttagtcgacctcctccatcttgctctcgccggc 233
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>dbj|AK064780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B06, full
            insert sequence
          Length = 2410

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 168  tggcgcttagtcgacctnctccatcttgctctcaccggc 206
            ||||||||||||||||| ||||||||||||||| |||||
Sbjct: 2232 tggcgcttagtcgacctcctccatcttgctctcgccggc 2194
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>emb|Z11920.1|OSHSP82A O.sativa gene for heat shock protein 82 HSP82
          Length = 5310

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 171  cgcttagtcgacctnctccatcttgctctcaccggc 206
            |||||||||||||| ||||||||||||||| |||||
Sbjct: 4934 cgcttagtcgacctcctccatcttgctctcgccggc 4899
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 171      cgcttagtcgacctnctccatcttgctctcaccggc 206
                |||||||||||||| ||||||||||||||| |||||
Sbjct: 24712197 cgcttagtcgacctcctccatcttgctctcgccggc 24712232
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>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1345_D02
          Length = 159613

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 171   cgcttagtcgacctnctccatcttgctctcaccggc 206
             |||||||||||||| ||||||||||||||| |||||
Sbjct: 12998 cgcttagtcgacctcctccatcttgctctcgccggc 13033
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>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A06
          Length = 92836

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 171   cgcttagtcgacctnctccatcttgctctcaccggc 206
             |||||||||||||| ||||||||||||||| |||||
Sbjct: 84501 cgcttagtcgacctcctccatcttgctctcgccggc 84536
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>dbj|AK102426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093F17, full
            insert sequence
          Length = 3149

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 171  cgcttagtcgacctnctccatcttgctctcaccggc 206
            |||||||||||||| ||||||||||||||| |||||
Sbjct: 2912 cgcttagtcgacctcctccatcttgctctcgccggc 2877
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>ref|XM_483191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2100

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 174  ttagtcgacctnctccatcttgctctcaccggc 206
            ||||||||||| ||||||||||||||| |||||
Sbjct: 2100 ttagtcgacctcctccatcttgctctcgccggc 2068
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>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 174   ttagtcgacctnctccatcttgctctcaccggc 206
             ||||||||||| ||||||||||||||| |||||
Sbjct: 10620 ttagtcgacctcctccatcttgctctcgccggc 10652
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>gb|BT016606.1| Zea mays clone Contig439 mRNA sequence
          Length = 867

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 172 gcttagtcgacctnctccatcttgctctc 200
           ||||||||||||| |||||||||||||||
Sbjct: 536 gcttagtcgacctcctccatcttgctctc 508
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>dbj|AK061896.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G11, full
            insert sequence
          Length = 2440

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 174  ttagtcgacctnctccatcttgctctcaccggc 206
            ||||||||||| ||||||||||||||| |||||
Sbjct: 2224 ttagtcgacctcctccatcttgctctcgccggc 2192
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>dbj|D29709.1|RICYK21 Oryza sativa mRNA, partial homologous to heat shock protein 82 gene
          Length = 371

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 174 ttagtcgacctnctccatcttgctctcaccggc 206
           ||||||||||| ||||||||||||||| |||||
Sbjct: 198 ttagtcgacctcctccatcttgctctcgccggc 166
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>dbj|AK121906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105K15, full
            insert sequence
          Length = 1278

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 174  ttagtcgacctnctccatcttgctctcaccggc 206
            ||||||||||| ||||||||||||||| |||||
Sbjct: 1064 ttagtcgacctcctccatcttgctctcgccggc 1032
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>dbj|AK119663.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-B04, full
            insert sequence
          Length = 1538

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 174  ttagtcgacctnctccatcttgctctcaccggc 206
            ||||||||||| ||||||||||||||| |||||
Sbjct: 1355 ttagtcgacctcctccatcttgctctcgccggc 1323
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>gb|BT024184.1| Zea mays clone EL01N0315D01 mRNA sequence
          Length = 1740

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 172  gcttagtcgacctnctccatcttgctctc 200
            ||||||||||||| |||||||||||||||
Sbjct: 1480 gcttagtcgacctcctccatcttgctctc 1452
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>gb|AY110769.1| Zea mays CL1264_4 mRNA sequence
          Length = 864

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 172 gcttagtcgacctnctccatcttgctctc 200
           ||||||||||||| |||||||||||||||
Sbjct: 534 gcttagtcgacctcctccatcttgctctc 506
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>gb|AY105939.1| Zea mays PCO150588 mRNA sequence
          Length = 1101

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 172 gcttagtcgacctnctccatcttgctctcaccggcatnatcctncag 218
           ||||||||||||| |||||||||||| || ||||| | ||||| |||
Sbjct: 896 gcttagtcgacctcctccatcttgctttcgccggcgtcatcctccag 850
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>gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds
          Length = 2397

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 175  tagtcgacctnctccatcttgctctcaccggc 206
            |||||||||| ||||||||||||||| |||||
Sbjct: 2211 tagtcgacctcctccatcttgctctcgccggc 2180
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>dbj|D21284.1|RICAD167 Oryza sativa AD167 mRNA for heat shock protein 82, partial sequence
          Length = 474

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 174 ttagtcgacctnctccatcttgctctc 200
           ||||||||||| |||||||||||||||
Sbjct: 270 ttagtcgacctcctccatcttgctctc 244
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>gb|AY103538.1| Zea mays PCO150589 mRNA sequence
          Length = 2534

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 173  cttagtcgacctnctccatcttgctctcacc 203
            |||||||||||| |||||||||||| |||||
Sbjct: 2280 cttagtcgacctcctccatcttgctttcacc 2250
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>gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence
          Length = 2179

 Score = 46.1 bits (23), Expect = 0.046
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 175  tagtcgacctnctccatcttgctctc 200
            |||||||||| |||||||||||||||
Sbjct: 2033 tagtcgacctcctccatcttgctctc 2008
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>gb|AY109427.1| Zea mays CL1264_2 mRNA sequence
          Length = 1267

 Score = 46.1 bits (23), Expect = 0.046
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 175  tagtcgacctnctccatcttgctctc 200
            |||||||||| |||||||||||||||
Sbjct: 1016 tagtcgacctcctccatcttgctctc 991
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>emb|X67711.2|OSHSC70A O.sativa hsp70 gene for heat shock protein 70
          Length = 4791

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 167  ttggcgcttagtcgacctnctccatcttg 195
            |||||||||||||||||| ||| ||||||
Sbjct: 4581 ttggcgcttagtcgacctcctcgatcttg 4553
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>gb|S59780.1|S59780 Zea mays heat shock protein HSP82 (hsp82) gene, complete cds
          Length = 3468

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 176  agtcgacctnctccatcttgctctc 200
            ||||||||| |||||||||||||||
Sbjct: 2970 agtcgacctcctccatcttgctctc 2946
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>ref|NM_124642.2| Arabidopsis thaliana HSP81-1 (HEAT SHOCK PROTEIN 81-1); ATP binding /
            unfolded protein binding AT5G52640 (HSP81-1) mRNA,
            complete cds
          Length = 2440

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 173  cttagtcgacctnctccatcttgctctc 200
            |||||||||| | |||||||||||||||
Sbjct: 2227 cttagtcgacttcctccatcttgctctc 2200
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>emb|Y07613.1|ATHSP90A A.thaliana hsp90A gene
          Length = 3413

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 173  cttagtcgacctnctccatcttgctctc 200
            |||||||||| | |||||||||||||||
Sbjct: 3216 cttagtcgacttcctccatcttgctctc 3189
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>gb|AY128296.1| Arabidopsis thaliana AT5g52640/F6N7_13 mRNA, complete cds
          Length = 2441

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 173  cttagtcgacctnctccatcttgctctc 200
            |||||||||| | |||||||||||||||
Sbjct: 2227 cttagtcgacttcctccatcttgctctc 2200
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>dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6N7
          Length = 74282

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 173   cttagtcgacctnctccatcttgctctc 200
             |||||||||| | |||||||||||||||
Sbjct: 34486 cttagtcgacttcctccatcttgctctc 34459
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>dbj|D00710.1|ATHHSP81 Arabidopsis thaliana HSP81-1 gene for 81kDa heat-shock protein,
            complete cds
          Length = 3213

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 173  cttagtcgacctnctccatcttgctctc 200
            |||||||||| | |||||||||||||||
Sbjct: 3056 cttagtcgacttcctccatcttgctctc 3029
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>gb|M62984.1|ATHHSP83 A.thaliana heat shock protein 83 mRNA, complete cds
          Length = 2390

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 173  cttagtcgacctnctccatcttgctctc 200
            |||||||||| | |||||||||||||||
Sbjct: 2188 cttagtcgacttcctccatcttgctctc 2161
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>gb|AY344115.1| Toxoplasma gondii heat shock protein 90 mRNA, complete cds
          Length = 2933

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 172  gcttagtcgacctnctccatctt 194
            ||||||||||||| |||||||||
Sbjct: 2261 gcttagtcgacctcctccatctt 2239
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>gb|AY292370.1| Toxoplasma gondii HSP90 mRNA, complete cds
          Length = 2966

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 172  gcttagtcgacctnctccatctt 194
            ||||||||||||| |||||||||
Sbjct: 2279 gcttagtcgacctcctccatctt 2257
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>gb|BT001091.1| Arabidopsis thaliana At5g52640/F6N7_13 mRNA, complete cds
          Length = 2118

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 174  ttagtcgacctnctccatcttgctctc 200
            ||||||||| | |||||||||||||||
Sbjct: 2118 ttagtcgacttcctccatcttgctctc 2092
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>gb|AF521007.1| Hevea brasiliensis heat shock protein mRNA, complete cds
          Length = 2405

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 174  ttagtcgacctnctccatcttgctctc 200
            ||||||||| | |||||||||||||||
Sbjct: 2217 ttagtcgacttcctccatcttgctctc 2191
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>gb|AF421541.1| Crypthecodinium cohnii Hsp90 mRNA, complete cds
          Length = 2540

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 173  cttagtcgacctnctccatcttg 195
            |||||||||||| ||||||||||
Sbjct: 2196 cttagtcgacctcctccatcttg 2174
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>gb|AF042329.1|AF042329 Eimeria tenella heat shock protein 90 (hsp90) mRNA, complete cds
          Length = 2505

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 173  cttagtcgacctnctccatcttg 195
            |||||||||||| ||||||||||
Sbjct: 2253 cttagtcgacctcctccatcttg 2231
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>emb|AJ937761.1| Uncultured beta proteobacterium fosmid clone b1bf1.1.a01
          Length = 37318

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    tggccgccaaaagacaaaac 71
             ||||||||||||||||||||
Sbjct: 36559 tggccgccaaaagacaaaac 36540


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,235,223
Number of Sequences: 3902068
Number of extensions: 1235223
Number of successful extensions: 76864
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76735
Number of HSP's gapped (non-prelim): 124
length of query: 224
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 202
effective length of database: 17,147,199,772
effective search space: 3463734353944
effective search space used: 3463734353944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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