ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y2162_ARATH (O22224) Protein At2g41620 150 7e-38
2FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.7... 35 0.17
3LCMT2_CANGA (Q6FXA5) Leucine carboxyl methyltransferase 2 (EC 2.... 32 1.8
4KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-ass... 31 4.1
5CHS2_NEUCR (P30589) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP ... 31 4.1
6BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor 31 4.1
7KRA3A_SHEEP (P02443) Keratin, high-sulfur matrix protein, IIIA3A 30 5.4
8KRA3_CAPHI (P02442) Keratin, high-sulfur matrix protein, IIIA3 (... 30 5.4
9KRA24_HUMAN (Q9BYR9) Keratin-associated protein 2-4 (Keratin-ass... 30 7.0
10FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor 30 9.1
11CD209_HYLCO (Q8HY01) CD209 antigen (Dendritic cell-specific ICAM... 30 9.1
12KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-as... 30 9.1
13CD209_HYLLA (Q8HY03) CD209 antigen (Dendritic cell-specific ICAM... 30 9.1
14KRA47_HUMAN (Q9BYR0) Keratin-associated protein 4-7 (Keratin-ass... 30 9.1

>Y2162_ARATH (O22224) Protein At2g41620|
          Length = 861

 Score =  150 bits (380), Expect(2) = 7e-38
 Identities = 69/113 (61%), Positives = 91/113 (80%)
 Frame = -2

Query: 634  LNSKIVLRQLEAILHIYRLARAGQTVDALRETIKLPFLHLDPQSPNVSVDVFRNLSPHVQ 455
            +  + +LR+LEAIL I++L R G  +DALRE  KLPFLHLDP+ P+ + DVF++ SP+ Q
Sbjct: 747  MEQETILRELEAILSIHKLGRLGNHLDALREIAKLPFLHLDPRMPDATADVFQSASPYFQ 806

Query: 454  ACVPDLLKVALNCMDNVRDTDGTLRAVKSKIANLVASNMSRNWPQDLYQKVAQ 296
             CVPDLLKVAL C+DNV DTDG++RA++SKIA  +ASN  RNWP+DLY+KVA+
Sbjct: 807  TCVPDLLKVALTCLDNVPDTDGSIRAMRSKIAGFLASNTHRNWPRDLYEKVAR 859



 Score = 26.6 bits (57), Expect(2) = 7e-38
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -1

Query: 695 EILETARYSSEASVQDKDLISEQQ 624
           +ILET +Y  E S+Q+++ + EQ+
Sbjct: 727 DILETYKYYPEVSLQERERVMEQE 750



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>FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.75) (Furin-2)|
          Length = 1679

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 4/107 (3%)
 Frame = -1

Query: 653  QDKDLISEQQNCTETAXXXXXXXXXXSCWTNC*RSEGNHQTSISSFGST----VSECISR 486
            +DK ++S  + C+E+            C  +C    G   TS +S         S C+S 
Sbjct: 1187 RDKCIVSGSEGCSESEFYSQVEGQCRPCHASCGSCNGPADTSCTSCPPNRLLEQSRCVSG 1246

Query: 485  CIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPCGK 345
            C + F     SLC+     CS+             C    +C  C K
Sbjct: 1247 CREGFFVEAGSLCSPCLHTCSQ-------------CVSRTNCSNCSK 1280



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>LCMT2_CANGA (Q6FXA5) Leucine carboxyl methyltransferase 2 (EC 2.1.1.-)|
          Length = 674

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = -2

Query: 532 LPFLHLDPQSPNVSVDVFRNLSPHVQACVPDLLKVALNCMDNVRDTDGTLRAVKSKIANL 353
           LPF  LDPQ+P  S   + N    +    PDLL +    +    +    +  +     N+
Sbjct: 115 LPFEMLDPQNPQYS--RYSNRLNFIDIDYPDLLNIKSGVIKETPELLSIIGGIDPTETNM 172

Query: 352 VASNMSRNWPQDLYQKVA 299
           + S   +  P DLY   A
Sbjct: 173 IISERYKTIPCDLYDMPA 190



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>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated protein|
           5.4) (Ultrahigh sulfur keratin-associated protein 5.4)
          Length = 288

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = -1

Query: 503 SECISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 351
           S C S C Q   + C   C+ S  G S     C +    P CCQ   C+PC
Sbjct: 209 SGCGSSCCQS--SCCKPCCSSSGCGSSCCQSSCCK----PYCCQSSCCKPC 253



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>CHS2_NEUCR (P30589) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 2)
          Length = 944

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 388 TLRAVKSKIANLVASNMSRNWPQDLYQKVAQCI 290
           T+ AV   I++  + N SR W  D +QK+  C+
Sbjct: 256 TMHAVMKNISHFCSRNKSRTWGADGWQKIVVCV 288



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>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor|
          Length = 1700

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 11/83 (13%)
 Frame = -1

Query: 572  CWTNC*RSEGNHQTSISSFGSTVSECISRCIQEFITPCSSLCAR-----------SPEGC 426
            C   C +++    +  S F     +C     ++FI  C+    +            PEGC
Sbjct: 1569 CACQCLKTKVCTDSDFSFFSHDTCDCECSNAKDFILNCNQKLNKVSCQPQCIQRPPPEGC 1628

Query: 425  SKLHGQC*RYRWDPACCQVKDCE 357
            ++  G+   + WDP  C+ K  E
Sbjct: 1629 AEKFGEF--FSWDPKACECKCIE 1649



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>KRA3A_SHEEP (P02443) Keratin, high-sulfur matrix protein, IIIA3A|
          Length = 130

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = -1

Query: 494 ISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 351
           +SRC +    PC       P  CS   G C      P  CQ   C PC
Sbjct: 46  VSRCTRPICEPCRRPVCCDP--CSLQEGCCRPITCCPTSCQAVVCRPC 91



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>KRA3_CAPHI (P02442) Keratin, high-sulfur matrix protein, IIIA3 (M2.6 protein)|
          Length = 132

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = -1

Query: 494 ISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 351
           +SRC +    PC       P  CS   G C      P  CQ   C PC
Sbjct: 46  VSRCTRPICEPCRRPVCCDP--CSLQEGCCRPITCCPTSCQAVVCRPC 91



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>KRA24_HUMAN (Q9BYR9) Keratin-associated protein 2-4 (Keratin-associated protein|
           2.4) (High sulfur keratin-associated protein 2.4)
          Length = 128

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 15/49 (30%), Positives = 18/49 (36%)
 Frame = -1

Query: 497 CISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 351
           C+ RC +    PC       P  CS   G C      P+ C    C PC
Sbjct: 46  CVPRCTRPICEPCRRPVCCDP--CSLQEGCCRPITCCPSSCTAVVCRPC 92



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>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor|
          Length = 4007

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 16/70 (22%), Positives = 25/70 (35%)
 Frame = -1

Query: 548 EGNHQTSISSFGSTVSECISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQV 369
           EG     +S  G    EC+++C   F    + LC    + C +  G+             
Sbjct: 678 EGLQVEQLSGVGIPSGECLAQCRAHFYLESTGLCEACHQSCFRCAGK-----------SP 726

Query: 368 KDCEPCGKQH 339
            +C  CG  H
Sbjct: 727 HNCTDCGPSH 736



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>CD209_HYLCO (Q8HY01) CD209 antigen (Dendritic cell-specific ICAM-3-grabbing|
           nonintegrin 1) (DC-SIGN1)
          Length = 404

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +3

Query: 126 GLQTRQTWFHRQTTMSTHHGALNLQLPVQMVLGNGELPIQIAHFPSTSGQTQT 284
           GL  RQT  ++       HGAL LQL    +L    L IQ++ FPS+  Q Q+
Sbjct: 22  GLGFRQTRGYKSLAGCLGHGALVLQLLSFTLLAG--LLIQVSKFPSSISQEQS 72



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>KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-associated|
           protein 5.11) (Ultrahigh sulfur keratin-associated
           protein 5.11)
          Length = 156

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = -1

Query: 545 GNHQTSISSFGSTVSECISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVK 366
           G+ +    S G + S C   C     + C S C +S   CSK    C       +CCQ  
Sbjct: 71  GSSKGGCGSCGCSQSNCCKPCCSS--SGCGSFCCQS--SCSK---PC---CCQSSCCQSS 120

Query: 365 DCEPC 351
            C+PC
Sbjct: 121 CCKPC 125



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>CD209_HYLLA (Q8HY03) CD209 antigen (Dendritic cell-specific ICAM-3-grabbing|
           nonintegrin 1) (DC-SIGN1)
          Length = 450

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +3

Query: 126 GLQTRQTWFHRQTTMSTHHGALNLQLPVQMVLGNGELPIQIAHFPSTSGQTQT 284
           GL  RQT  ++       HGAL LQL    +L    L IQ++ FPS+  Q Q+
Sbjct: 22  GLGFRQTRGYKSLAGCLGHGALVLQLLSFTLLAG--LLIQVSKFPSSISQEQS 72



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>KRA47_HUMAN (Q9BYR0) Keratin-associated protein 4-7 (Keratin-associated protein|
           4.7) (Ultrahigh sulfur keratin-associated protein 4.7)
          Length = 210

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
 Frame = -1

Query: 572 CWTNC*RSEGNHQTSISSFGSTVSECISRCIQEFITPCSSLCARSPEGC--SKLHGQC*R 399
           C + C +    H +   S     S C+SRC +     C S+C + P  C  S     C R
Sbjct: 100 CQSVCCQPTCCHPSCCISSCCRPSCCVSRCCRPQC--CQSVCCQ-PTCCRPSCCISSCCR 156

Query: 398 YRWDPACCQVKDCEPC 351
               P+CC+   C PC
Sbjct: 157 ----PSCCESSCCRPC 168


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,883,119
Number of Sequences: 219361
Number of extensions: 2324110
Number of successful extensions: 5914
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5884
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6912958834
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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