Clone Name | rbasd14e04 |
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Clone Library Name | barley_pub |
>Y2162_ARATH (O22224) Protein At2g41620| Length = 861 Score = 150 bits (380), Expect(2) = 7e-38 Identities = 69/113 (61%), Positives = 91/113 (80%) Frame = -2 Query: 634 LNSKIVLRQLEAILHIYRLARAGQTVDALRETIKLPFLHLDPQSPNVSVDVFRNLSPHVQ 455 + + +LR+LEAIL I++L R G +DALRE KLPFLHLDP+ P+ + DVF++ SP+ Q Sbjct: 747 MEQETILRELEAILSIHKLGRLGNHLDALREIAKLPFLHLDPRMPDATADVFQSASPYFQ 806 Query: 454 ACVPDLLKVALNCMDNVRDTDGTLRAVKSKIANLVASNMSRNWPQDLYQKVAQ 296 CVPDLLKVAL C+DNV DTDG++RA++SKIA +ASN RNWP+DLY+KVA+ Sbjct: 807 TCVPDLLKVALTCLDNVPDTDGSIRAMRSKIAGFLASNTHRNWPRDLYEKVAR 859 Score = 26.6 bits (57), Expect(2) = 7e-38 Identities = 10/24 (41%), Positives = 18/24 (75%) Frame = -1 Query: 695 EILETARYSSEASVQDKDLISEQQ 624 +ILET +Y E S+Q+++ + EQ+ Sbjct: 727 DILETYKYYPEVSLQERERVMEQE 750
>FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.75) (Furin-2)| Length = 1679 Score = 35.4 bits (80), Expect = 0.17 Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 4/107 (3%) Frame = -1 Query: 653 QDKDLISEQQNCTETAXXXXXXXXXXSCWTNC*RSEGNHQTSISSFGST----VSECISR 486 +DK ++S + C+E+ C +C G TS +S S C+S Sbjct: 1187 RDKCIVSGSEGCSESEFYSQVEGQCRPCHASCGSCNGPADTSCTSCPPNRLLEQSRCVSG 1246 Query: 485 CIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPCGK 345 C + F SLC+ CS+ C +C C K Sbjct: 1247 CREGFFVEAGSLCSPCLHTCSQ-------------CVSRTNCSNCSK 1280
>LCMT2_CANGA (Q6FXA5) Leucine carboxyl methyltransferase 2 (EC 2.1.1.-)| Length = 674 Score = 32.0 bits (71), Expect = 1.8 Identities = 21/78 (26%), Positives = 32/78 (41%) Frame = -2 Query: 532 LPFLHLDPQSPNVSVDVFRNLSPHVQACVPDLLKVALNCMDNVRDTDGTLRAVKSKIANL 353 LPF LDPQ+P S + N + PDLL + + + + + N+ Sbjct: 115 LPFEMLDPQNPQYS--RYSNRLNFIDIDYPDLLNIKSGVIKETPELLSIIGGIDPTETNM 172 Query: 352 VASNMSRNWPQDLYQKVA 299 + S + P DLY A Sbjct: 173 IISERYKTIPCDLYDMPA 190
>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated protein| 5.4) (Ultrahigh sulfur keratin-associated protein 5.4) Length = 288 Score = 30.8 bits (68), Expect = 4.1 Identities = 18/51 (35%), Positives = 22/51 (43%) Frame = -1 Query: 503 SECISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 351 S C S C Q + C C+ S G S C + P CCQ C+PC Sbjct: 209 SGCGSSCCQS--SCCKPCCSSSGCGSSCCQSSCCK----PYCCQSSCCKPC 253
>CHS2_NEUCR (P30589) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 2) Length = 944 Score = 30.8 bits (68), Expect = 4.1 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 388 TLRAVKSKIANLVASNMSRNWPQDLYQKVAQCI 290 T+ AV I++ + N SR W D +QK+ C+ Sbjct: 256 TMHAVMKNISHFCSRNKSRTWGADGWQKIVVCV 288
>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor| Length = 1700 Score = 30.8 bits (68), Expect = 4.1 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 11/83 (13%) Frame = -1 Query: 572 CWTNC*RSEGNHQTSISSFGSTVSECISRCIQEFITPCSSLCAR-----------SPEGC 426 C C +++ + S F +C ++FI C+ + PEGC Sbjct: 1569 CACQCLKTKVCTDSDFSFFSHDTCDCECSNAKDFILNCNQKLNKVSCQPQCIQRPPPEGC 1628 Query: 425 SKLHGQC*RYRWDPACCQVKDCE 357 ++ G+ + WDP C+ K E Sbjct: 1629 AEKFGEF--FSWDPKACECKCIE 1649
>KRA3A_SHEEP (P02443) Keratin, high-sulfur matrix protein, IIIA3A| Length = 130 Score = 30.4 bits (67), Expect = 5.4 Identities = 16/48 (33%), Positives = 18/48 (37%) Frame = -1 Query: 494 ISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 351 +SRC + PC P CS G C P CQ C PC Sbjct: 46 VSRCTRPICEPCRRPVCCDP--CSLQEGCCRPITCCPTSCQAVVCRPC 91
>KRA3_CAPHI (P02442) Keratin, high-sulfur matrix protein, IIIA3 (M2.6 protein)| Length = 132 Score = 30.4 bits (67), Expect = 5.4 Identities = 16/48 (33%), Positives = 18/48 (37%) Frame = -1 Query: 494 ISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 351 +SRC + PC P CS G C P CQ C PC Sbjct: 46 VSRCTRPICEPCRRPVCCDP--CSLQEGCCRPITCCPTSCQAVVCRPC 91
>KRA24_HUMAN (Q9BYR9) Keratin-associated protein 2-4 (Keratin-associated protein| 2.4) (High sulfur keratin-associated protein 2.4) Length = 128 Score = 30.0 bits (66), Expect = 7.0 Identities = 15/49 (30%), Positives = 18/49 (36%) Frame = -1 Query: 497 CISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVKDCEPC 351 C+ RC + PC P CS G C P+ C C PC Sbjct: 46 CVPRCTRPICEPCRRPVCCDP--CSLQEGCCRPITCCPSSCTAVVCRPC 92
>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor| Length = 4007 Score = 29.6 bits (65), Expect = 9.1 Identities = 16/70 (22%), Positives = 25/70 (35%) Frame = -1 Query: 548 EGNHQTSISSFGSTVSECISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQV 369 EG +S G EC+++C F + LC + C + G+ Sbjct: 678 EGLQVEQLSGVGIPSGECLAQCRAHFYLESTGLCEACHQSCFRCAGK-----------SP 726 Query: 368 KDCEPCGKQH 339 +C CG H Sbjct: 727 HNCTDCGPSH 736
>CD209_HYLCO (Q8HY01) CD209 antigen (Dendritic cell-specific ICAM-3-grabbing| nonintegrin 1) (DC-SIGN1) Length = 404 Score = 29.6 bits (65), Expect = 9.1 Identities = 21/53 (39%), Positives = 28/53 (52%) Frame = +3 Query: 126 GLQTRQTWFHRQTTMSTHHGALNLQLPVQMVLGNGELPIQIAHFPSTSGQTQT 284 GL RQT ++ HGAL LQL +L L IQ++ FPS+ Q Q+ Sbjct: 22 GLGFRQTRGYKSLAGCLGHGALVLQLLSFTLLAG--LLIQVSKFPSSISQEQS 72
>KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-associated| protein 5.11) (Ultrahigh sulfur keratin-associated protein 5.11) Length = 156 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/65 (30%), Positives = 27/65 (41%) Frame = -1 Query: 545 GNHQTSISSFGSTVSECISRCIQEFITPCSSLCARSPEGCSKLHGQC*RYRWDPACCQVK 366 G+ + S G + S C C + C S C +S CSK C +CCQ Sbjct: 71 GSSKGGCGSCGCSQSNCCKPCCSS--SGCGSFCCQS--SCSK---PC---CCQSSCCQSS 120 Query: 365 DCEPC 351 C+PC Sbjct: 121 CCKPC 125
>CD209_HYLLA (Q8HY03) CD209 antigen (Dendritic cell-specific ICAM-3-grabbing| nonintegrin 1) (DC-SIGN1) Length = 450 Score = 29.6 bits (65), Expect = 9.1 Identities = 21/53 (39%), Positives = 28/53 (52%) Frame = +3 Query: 126 GLQTRQTWFHRQTTMSTHHGALNLQLPVQMVLGNGELPIQIAHFPSTSGQTQT 284 GL RQT ++ HGAL LQL +L L IQ++ FPS+ Q Q+ Sbjct: 22 GLGFRQTRGYKSLAGCLGHGALVLQLLSFTLLAG--LLIQVSKFPSSISQEQS 72
>KRA47_HUMAN (Q9BYR0) Keratin-associated protein 4-7 (Keratin-associated protein| 4.7) (Ultrahigh sulfur keratin-associated protein 4.7) Length = 210 Score = 29.6 bits (65), Expect = 9.1 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 2/76 (2%) Frame = -1 Query: 572 CWTNC*RSEGNHQTSISSFGSTVSECISRCIQEFITPCSSLCARSPEGC--SKLHGQC*R 399 C + C + H + S S C+SRC + C S+C + P C S C R Sbjct: 100 CQSVCCQPTCCHPSCCISSCCRPSCCVSRCCRPQC--CQSVCCQ-PTCCRPSCCISSCCR 156 Query: 398 YRWDPACCQVKDCEPC 351 P+CC+ C PC Sbjct: 157 ----PSCCESSCCRPC 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,883,119 Number of Sequences: 219361 Number of extensions: 2324110 Number of successful extensions: 5914 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 5641 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5884 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)