ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK099999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 426 e-116
2gb|AY108425.1| Zea mays PCO146490 mRNA sequence 408 e-110
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 309 7e-81
4gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare str... 309 7e-81
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 309 7e-81
6gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome... 309 7e-81
7gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-2... 50 0.010
8emb|Z95331.2|HS941F9 Human DNA sequence from clone CTA-941F9 on ... 44 0.61
9gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, com... 44 0.61
10gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete ... 44 0.61
11dbj|AB051572.1| Aphis gossypii mRNA for GrpE, complete cds 44 0.61
12dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 44 0.61
13emb|AL646090.5| Human DNA sequence from clone RP11-542F9 on chro... 42 2.4
14emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chr... 42 2.4
15emb|AL356500.14| Human DNA sequence from clone RP11-307G7 on chr... 42 2.4
16gb|AC128692.11| Homo sapiens 3 BAC RP11-743G11 (Roswell Park Can... 42 2.4
17emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chr... 42 2.4
18emb|AL732401.6| Mouse DNA sequence from clone RP23-405K20 on chr... 42 2.4
19gb|AC019306.10| Homo sapiens chromosome 18, clone RP11-326M20, c... 42 2.4
20gb|AC025159.28| Homo sapiens 12 BAC RP11-1082K22 (Roswell Park C... 42 2.4
21gb|AC163352.2| Mus musculus BAC clone RP23-98P11 from chromosome... 42 2.4
22gb|AC007768.5| Homo sapiens chromosome 18, clone RP11-540M4, com... 42 2.4
23emb|BX296525.5| Zebrafish DNA sequence from clone CH211-252F24 i... 42 2.4
24gb|AC024942.18|AC024942 Homo sapiens 12 BAC RP11-1115M13 (Roswel... 42 2.4
25emb|CR392341.14| Zebrafish DNA sequence from clone CH211-222E20 ... 42 2.4
26gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 ... 42 2.4
27gb|AC132466.4| Mus musculus BAC clone RP23-68N22 from 16, comple... 42 2.4
28ref|NM_001035934.1| Arabidopsis thaliana protein transporter AT1... 40 9.5
29ref|NM_179292.1| Arabidopsis thaliana protein transporter AT1G09... 40 9.5
30ref|NM_100797.4| Arabidopsis thaliana protein transporter AT1G09... 40 9.5
31gb|DQ011272.1| Oikopleura dioica eyes absent (eya) gene, complet... 40 9.5
32gb|AC116321.4| Mus musculus BAC clone RP23-270L15 from chromosom... 40 9.5
33gb|AC005029.1| Homo sapiens BAC clone GS1-588G18 from 7, complet... 40 9.5
34emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chrom... 40 9.5
35gb|AY050888.1| Arabidopsis thaliana At1g09270 mRNA sequence 40 9.5
36emb|Y14616.1|ATIMPA4 Arabidopsis thaliana partial mRNA for impor... 40 9.5
37gb|AY117313.1| Arabidopsis thaliana putative importin alpha prot... 40 9.5
38gb|AY090944.1| Arabidopsis thaliana putative importin alpha prot... 40 9.5
39emb|AJ291298.1|PSA291298 Pisum sativum peam4 gene for MADS-box t... 40 9.5
40emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in ... 40 9.5
41emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in ... 40 9.5
42gb|AC009260.13| Homo sapiens 12 BAC RP11-435A10 (Roswell Park Ca... 40 9.5
43gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, comp... 40 9.5
44emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 i... 40 9.5
45gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosom... 40 9.5
46gb|AF367284.1|AF367284 Arabidopsis thaliana At1g09270/T12M4_2 mR... 40 9.5
47gb|AC024882.1| Caenorhabditis elegans cosmid Y9C9A, complete seq... 40 9.5
48gb|AC013602.4|AC013602 Homo sapiens, clone RP11-10C6, complete s... 40 9.5
49gb|AC009750.7|AC009750 Drosophila melanogaster, chromosome 2L, r... 40 9.5
50emb|BX815301.1|CNS0AALB Arabidopsis thaliana Full-length cDNA Co... 40 9.5
51gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O... 40 9.5
52gb|AC069550.4|AC069550 Sequence of chromosome 2 clone RP11-471B2... 40 9.5
53gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, com... 40 9.5
54gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, com... 40 9.5
55gb|AC105029.7| Homo sapiens chromosome 8, clone CTD-2210A23, com... 40 9.5
56gb|AF254136.3| Homo sapiens chromosome 8 clone RP11-386F22, RP11... 40 9.5
57gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q... 40 9.5
58gb|AC011088.8|AC011088 Homo sapiens chromosome 11, clone RP11-29... 40 9.5
59dbj|BS000245.1| Pan troglodytes chromosome 22 clone:PTB-059I14, ... 40 9.5
60dbj|BS000244.1| Pan troglodytes chromosome 22 clone:PTB-070F15, ... 40 9.5
61gb|AE003580.3| Drosophila melanogaster chromosome 2L, section 11... 40 9.5
62emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chr... 40 9.5
63gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosom... 40 9.5
64emb|AL672184.13| Mouse DNA sequence from clone RP23-421G11 on ch... 40 9.5 
>dbj|AK099999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134K18, full
            insert sequence
          Length = 3073

 Score =  426 bits (215), Expect = e-116
 Identities = 362/409 (88%), Gaps = 4/409 (0%)
 Strand = Plus / Minus

                                                                        
Query: 287  tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 346
            |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 2691 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 2632

                                                                        
Query: 347  tgccacaaggttcgcaatctttgacttgacagcacgcagggtcccatcggtatctctaac 406
            |||||| ||||| || |||||||||||||| ||||||| ||||||||| |||||||||||
Sbjct: 2631 tgccacgaggtttgcgatctttgacttgactgcacgcaaggtcccatcagtatctctaac 2572

                                                                        
Query: 407  attgtccatgcagtttagagcaaccttcaggagatctggcacacaagcttgaacatgggg 466
            ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 2571 attgtccatacaatttagagcaaccttcaagagatctggcacacaagcttgaacatgcgg 2512

                                                                        
Query: 467  tgataaattcctgaatacatcgactgatacattcggagactgtggatccaaatgaagaaa 526
            ||| || || ||||| ||||| ||||  ||||| |||| ||| |||||||||||||||||
Sbjct: 2511 tgacaagtttctgaacacatcaactgtcacatttggagcctgaggatccaaatgaagaaa 2452

                                                                        
Query: 527  tggaagtttgatggtttccctcagagcgtcaacagtttgtccagcacgagctagcctata 586
            ||| ||||||||||||||||||| ||| || | ||| |||||||| ||||| ||||||||
Sbjct: 2451 tgggagtttgatggtttccctcaaagcatctaaagtctgtccagctcgagcaagcctata 2392

                                                                        
Query: 587  aatgtgaagaatagcttcaagctgtctcagtacaattttgctgttcagaaatgagatcct 646
             || || ||||||||||||||||||||||||||| ||| | || ||||| ||||| ||||
Sbjct: 2391 gatatggagaatagcttcaagctgtctcagtacagttt-gttgctcagatatgaggtcct 2333

                                                             
Query: 647  tgtcttgaacactggcttcagaagaatatctggctgtctccaaaatttc 695
            ||||||||||||||||||| |||   |||||||| || |||| ||||||
Sbjct: 2332 tgtcttgaacactggcttccgaa---tatctggcagtttccataatttc 2287
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>gb|AY108425.1| Zea mays PCO146490 mRNA sequence
          Length = 775

 Score =  408 bits (206), Expect = e-110
 Identities = 360/410 (87%), Gaps = 1/410 (0%)
 Strand = Plus / Minus

                                                                       
Query: 286 ttcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgc 345
           ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 609 ttcatatgcactgtgccaccttctgatacaaatcctgtggccaattccggctcatgttgc 550

                                                                       
Query: 346 ttgccacaaggttcgcaatctttgacttgacagcacgcagggtcccatcggtatctctaa 405
           |||| |||||||| || |||||||| |||||||| |||| ||||||||| ||||||||||
Sbjct: 549 ttgctacaaggtttgcgatctttgatttgacagcgcgcaaggtcccatcagtatctctaa 490

                                                                       
Query: 406 cattgtccatgcagtttagagcaaccttcaggagatctggcacacaagcttgaacatggg 465
           ||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 489 cattgtcaatgcaatttagagcaaccttcaggagatctggcacgcaagcttgaacatggg 430

                                                                       
Query: 466 gtgataaattcctgaatacatcgactgatacattcggagactgtggatccaaatgaagaa 525
           |||| || |||||||| |  || || |  ||||| |||| ||  || ||||||||||| |
Sbjct: 429 gtgacaagttcctgaaaatgtcaacagtcacatttggagccttggggtccaaatgaagga 370

                                                                       
Query: 526 atggaagtttgatggtttccctcagagcgtcaacagtttgtccagcacgagctagcctat 585
           | || ||  ||||||||||||||| ||| || |||||||| ||||| |||||||||||||
Sbjct: 369 agggtagcctgatggtttccctcaaagcatctacagtttgcccagctcgagctagcctat 310

                                                                       
Query: 586 aaatgtgaagaatagcttcaagctgtctcagtacaattttgctgttcagaaatgagatcc 645
           |||| || ||||||||||||||||||||||| || | |||| || ||||||||||| |||
Sbjct: 309 aaatatggagaatagcttcaagctgtctcagcac-agtttgttgctcagaaatgaggtcc 251

                                                             
Query: 646 ttgtcttgaacactggcttcagaagaatatctggctgtctccaaaatttc 695
           || |||||||  |||||||||||||| ||||| |||||||||||||||||
Sbjct: 250 ttctcttgaatgctggcttcagaagagtatctagctgtctccaaaatttc 201
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  309 bits (156), Expect = 7e-81
 Identities = 262/296 (88%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                            
Query: 365      ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 424
                |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 13075933 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 13075992

                                                                            
Query: 425      agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 484
                ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| ||
Sbjct: 13075993 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 13076052

                                                                            
Query: 485      atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 544
                ||| ||||  ||||| |||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 13076053 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 13076112

                                                                            
Query: 545      cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 604
                ||||| ||| || | ||| |||||||| ||||| |||||||| || || |||||||||||
Sbjct: 13076113 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 13076172

                                                                        
Query: 605      aagctgtctcagtacaattttgctgttcagaaatgagatccttgtcttgaacactg 660
                ||||||||||||||| | |||| || ||||| ||||| ||||||||||||||||||
Sbjct: 13076173 aagctgtctcagtac-agtttgttgctcagatatgaggtccttgtcttgaacactg 13076227



 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                            
Query: 287      tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 346
                |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 13075155 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 13075214

                            
Query: 347      tgccacaaggtt 358
                |||||| |||||
Sbjct: 13075215 tgccacgaggtt 13075226
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>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07,
              from chromosome 3, complete sequence
          Length = 151173

 Score =  309 bits (156), Expect = 7e-81
 Identities = 262/296 (88%), Gaps = 1/296 (0%)
 Strand = Plus / Minus

                                                                          
Query: 365    ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 424
              |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 150683 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 150624

                                                                          
Query: 425    agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 484
              ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| ||
Sbjct: 150623 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 150564

                                                                          
Query: 485    atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 544
              ||| ||||  ||||| |||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 150563 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 150504

                                                                          
Query: 545    cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 604
              ||||| ||| || | ||| |||||||| ||||| |||||||| || || |||||||||||
Sbjct: 150503 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 150444

                                                                      
Query: 605    aagctgtctcagtacaattttgctgttcagaaatgagatccttgtcttgaacactg 660
              ||||||||||||||| | |||| || ||||| ||||| ||||||||||||||||||
Sbjct: 150443 aagctgtctcagtac-agtttgttgctcagatatgaggtccttgtcttgaacactg 150389
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  309 bits (156), Expect = 7e-81
 Identities = 262/296 (88%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                            
Query: 365      ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 424
                |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 13072708 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 13072767

                                                                            
Query: 425      agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 484
                ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| ||
Sbjct: 13072768 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 13072827

                                                                            
Query: 485      atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 544
                ||| ||||  ||||| |||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 13072828 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 13072887

                                                                            
Query: 545      cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 604
                ||||| ||| || | ||| |||||||| ||||| |||||||| || || |||||||||||
Sbjct: 13072888 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 13072947

                                                                        
Query: 605      aagctgtctcagtacaattttgctgttcagaaatgagatccttgtcttgaacactg 660
                ||||||||||||||| | |||| || ||||| ||||| ||||||||||||||||||
Sbjct: 13072948 aagctgtctcagtac-agtttgttgctcagatatgaggtccttgtcttgaacactg 13073002



 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                            
Query: 287      tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 346
                |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 13071930 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 13071989

                            
Query: 347      tgccacaaggtt 358
                |||||| |||||
Sbjct: 13071990 tgccacgaggtt 13072001
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>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11,
              complete sequence
          Length = 176637

 Score =  309 bits (156), Expect = 7e-81
 Identities = 262/296 (88%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                          
Query: 365    ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 424
              |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 153631 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 153690

                                                                          
Query: 425    agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 484
              ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| ||
Sbjct: 153691 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 153750

                                                                          
Query: 485    atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 544
              ||| ||||  ||||| |||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 153751 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 153810

                                                                          
Query: 545    cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 604
              ||||| ||| || | ||| |||||||| ||||| |||||||| || || |||||||||||
Sbjct: 153811 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 153870

                                                                      
Query: 605    aagctgtctcagtacaattttgctgttcagaaatgagatccttgtcttgaacactg 660
              ||||||||||||||| | |||| || ||||| ||||| ||||||||||||||||||
Sbjct: 153871 aagctgtctcagtac-agtttgttgctcagatatgaggtccttgtcttgaacactg 153925



 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                          
Query: 287    tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 346
              |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 152853 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 152912

                          
Query: 347    tgccacaaggtt 358
              |||||| |||||
Sbjct: 152913 tgccacgaggtt 152924
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>gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-22d10, complete
             sequence
          Length = 105618

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 423   agagcaaccttcaggagatctggcacacaagcttgaacatggggtgataaatt 475
             ||||||||||||| ||| ||||| | ||||||||| ||||| || ||||||||
Sbjct: 48601 agagcaaccttcaagaggtctggtatacaagcttggacatgaggagataaatt 48653
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>emb|Z95331.2|HS941F9 Human DNA sequence from clone CTA-941F9 on chromosome 22q13, complete
              sequence
          Length = 127587

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 194    ccttcaactacctgttcaaatg 215
              ||||||||||||||||||||||
Sbjct: 116078 ccttcaactacctgttcaaatg 116057
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>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence
          Length = 158297

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 83    atgaaaagtggcagttttcttg 104
             ||||||||||||||||||||||
Sbjct: 92561 atgaaaagtggcagttttcttg 92540
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>gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete sequence
          Length = 172914

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 400    ctctaacattgtccatgcagtttaga 425
              |||||||||||| |||||||||||||
Sbjct: 139697 ctctaacattgtacatgcagtttaga 139672
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>dbj|AB051572.1| Aphis gossypii mRNA for GrpE, complete cds
          Length = 881

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 193 accttcaactacctgttcaaat 214
           ||||||||||||||||||||||
Sbjct: 666 accttcaactacctgttcaaat 645
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>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete
              sequence
          Length = 175784

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 400    ctctaacattgtccatgcagtttaga 425
              |||||||||||| |||||||||||||
Sbjct: 133427 ctctaacattgtacatgcagtttaga 133452
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>emb|AL646090.5| Human DNA sequence from clone RP11-542F9 on chromosome 6 Contains a
             novel gene, complete sequence
          Length = 88711

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   aacaagacagacatggttcca 154
             |||||||||||||||||||||
Sbjct: 87086 aacaagacagacatggttcca 87106
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>emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chromosome 6 Contains
           the 3' part of a novel gene, complete sequence
          Length = 157929

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 134 aacaagacagacatggttcca 154
           |||||||||||||||||||||
Sbjct: 375 aacaagacagacatggttcca 395
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>emb|AL356500.14| Human DNA sequence from clone RP11-307G7 on chromosome 1, complete
             sequence
          Length = 41741

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 514   ccaaatgaagaaatggaagtttgat 538
             ||||||||||||||||||| |||||
Sbjct: 34755 ccaaatgaagaaatggaaggttgat 34731
to top
>gb|AC128692.11| Homo sapiens 3 BAC RP11-743G11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 83627

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 466   gtgataaattcctgaatacat 486
             |||||||||||||||||||||
Sbjct: 32634 gtgataaattcctgaatacat 32614
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>emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chromosome 11 Contains
           the 3' end of the Slit3 gene for slit homolog 3
           (Drosophila), complete sequence
          Length = 113164

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 245 gatagcccatttccctagcac 265
           |||||||||||||||||||||
Sbjct: 16  gatagcccatttccctagcac 36
to top
>emb|AL732401.6| Mouse DNA sequence from clone RP23-405K20 on chromosome 11 Contains
             part of the Slit3 gene for slit homolog 3 (Drosophila),
             complete sequence
          Length = 89624

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 245   gatagcccatttccctagcac 265
             |||||||||||||||||||||
Sbjct: 87640 gatagcccatttccctagcac 87660
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>gb|AC019306.10| Homo sapiens chromosome 18, clone RP11-326M20, complete sequence
          Length = 175840

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   aaacaagacagacatggttcc 153
             |||||||||||||||||||||
Sbjct: 10044 aaacaagacagacatggttcc 10064
to top
>gb|AC025159.28| Homo sapiens 12 BAC RP11-1082K22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 209961

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    gatagcccatttccctagcac 265
              |||||||||||||||||||||
Sbjct: 113002 gatagcccatttccctagcac 112982
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>gb|AC163352.2| Mus musculus BAC clone RP23-98P11 from chromosome 16, complete sequence
          Length = 190996

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 620   aattttgctgttcagaaatga 640
             |||||||||||||||||||||
Sbjct: 52977 aattttgctgttcagaaatga 52957
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>gb|AC007768.5| Homo sapiens chromosome 18, clone RP11-540M4, complete sequence
          Length = 175579

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   aaacaagacagacatggttcc 153
             |||||||||||||||||||||
Sbjct: 97179 aaacaagacagacatggttcc 97199
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>emb|BX296525.5| Zebrafish DNA sequence from clone CH211-252F24 in linkage group 10,
             complete sequence
          Length = 160412

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 620   aattttgctgttcagaaatga 640
             |||||||||||||||||||||
Sbjct: 30352 aattttgctgttcagaaatga 30372
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>gb|AC024942.18|AC024942 Homo sapiens 12 BAC RP11-1115M13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 146120

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 245   gatagcccatttccctagcac 265
             |||||||||||||||||||||
Sbjct: 94042 gatagcccatttccctagcac 94022
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>emb|CR392341.14| Zebrafish DNA sequence from clone CH211-222E20 in linkage group 10,
              complete sequence
          Length = 208667

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 620    aattttgctgttcagaaatga 640
              |||||||||||||||||||||
Sbjct: 189885 aattttgctgttcagaaatga 189865
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>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete
            sequence
          Length = 59261

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 202  tacctgttcaaatggtgttgg 222
            |||||||||||||||||||||
Sbjct: 6168 tacctgttcaaatggtgttgg 6188
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>gb|AC132466.4| Mus musculus BAC clone RP23-68N22 from 16, complete sequence
          Length = 144237

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 620    aattttgctgttcagaaatga 640
              |||||||||||||||||||||
Sbjct: 114504 aattttgctgttcagaaatga 114484
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>ref|NM_001035934.1| Arabidopsis thaliana protein transporter AT1G09270 transcript
           variant AT1G09270.3 mRNA, complete cds
          Length = 2475

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 acctgttcaaatggtgttgg 222
           ||||||||||||||||||||
Sbjct: 828 acctgttcaaatggtgttgg 809
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>ref|NM_179292.1| Arabidopsis thaliana protein transporter AT1G09270 transcript
           variant AT1G09270.2 mRNA, complete cds
          Length = 2404

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 acctgttcaaatggtgttgg 222
           ||||||||||||||||||||
Sbjct: 838 acctgttcaaatggtgttgg 819
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>ref|NM_100797.4| Arabidopsis thaliana protein transporter AT1G09270 transcript
           variant AT1G09270.1 mRNA, complete cds
          Length = 2710

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 acctgttcaaatggtgttgg 222
           ||||||||||||||||||||
Sbjct: 838 acctgttcaaatggtgttgg 819
to top
>gb|DQ011272.1| Oikopleura dioica eyes absent (eya) gene, complete cds
          Length = 43001

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    gcagttttcttgaattttga 112
             ||||||||||||||||||||
Sbjct: 35618 gcagttttcttgaattttga 35599
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>gb|AC116321.4| Mus musculus BAC clone RP23-270L15 from chromosome 2, complete sequence
          Length = 183636

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 630   ttcagaaatgagatccttgt 649
             ||||||||||||||||||||
Sbjct: 89591 ttcagaaatgagatccttgt 89610
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>gb|AC005029.1| Homo sapiens BAC clone GS1-588G18 from 7, complete sequence
          Length = 184949

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 578   tagcctataaatgtgaagaa 597
             ||||||||||||||||||||
Sbjct: 19318 tagcctataaatgtgaagaa 19337
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>emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chromosome Xq22.2-23 Contains
              a thyroid autoantigen 70kDa (Ku antigen) (G22P1)
              pseudogene, complete sequence
          Length = 133402

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    tgttggggaatggggagctt 236
              ||||||||||||||||||||
Sbjct: 108770 tgttggggaatggggagctt 108789
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>gb|AY050888.1| Arabidopsis thaliana At1g09270 mRNA sequence
          Length = 2406

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 acctgttcaaatggtgttgg 222
           ||||||||||||||||||||
Sbjct: 877 acctgttcaaatggtgttgg 858
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>emb|Y14616.1|ATIMPA4 Arabidopsis thaliana partial mRNA for importin alpha-like protein 4
          Length = 1778

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 acctgttcaaatggtgttgg 222
           ||||||||||||||||||||
Sbjct: 713 acctgttcaaatggtgttgg 694
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>gb|AY117313.1| Arabidopsis thaliana putative importin alpha protein (At1g09270)
           mRNA, complete cds
          Length = 1648

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 acctgttcaaatggtgttgg 222
           ||||||||||||||||||||
Sbjct: 740 acctgttcaaatggtgttgg 721
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>gb|AY090944.1| Arabidopsis thaliana putative importin alpha protein (At1g09270)
           mRNA, complete cds
          Length = 2001

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 acctgttcaaatggtgttgg 222
           ||||||||||||||||||||
Sbjct: 838 acctgttcaaatggtgttgg 819
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>emb|AJ291298.1|PSA291298 Pisum sativum peam4 gene for MADS-box transcription factor, exons 1-8
          Length = 3333

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  caagcttgaacatggggtga 469
            ||||||||||||||||||||
Sbjct: 3029 caagcttgaacatggggtga 3048
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>emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in linkage group 21,
              complete sequence
          Length = 185814

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     taaatcatgaaaagtggcagtttt 100
              |||||||| |||||||||||||||
Sbjct: 154062 taaatcataaaaagtggcagtttt 154085
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>emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in linkage group 11,
             complete sequence
          Length = 252675

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   cttgaattttgacacacaca 120
             ||||||||||||||||||||
Sbjct: 38706 cttgaattttgacacacaca 38725
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>gb|AC009260.13| Homo sapiens 12 BAC RP11-435A10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 99727

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 58    acagccttggatttagtaataaat 81
             |||||||||||||| |||||||||
Sbjct: 11641 acagccttggattttgtaataaat 11618
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>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence
          Length = 151712

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    aacaagacagacatggttcc 153
              ||||||||||||||||||||
Sbjct: 138418 aacaagacagacatggttcc 138399
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>emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 in linkage group 17,
              complete sequence
          Length = 173690

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     ttagtaataaatcatgaaaa 89
              ||||||||||||||||||||
Sbjct: 121635 ttagtaataaatcatgaaaa 121616
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>gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosome 14, complete sequence
          Length = 154626

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    acaaatcctgtggccaattc 332
              ||||||||||||||||||||
Sbjct: 128798 acaaatcctgtggccaattc 128817
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>gb|AF367284.1|AF367284 Arabidopsis thaliana At1g09270/T12M4_2 mRNA, partial cds
          Length = 1126

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 acctgttcaaatggtgttgg 222
           ||||||||||||||||||||
Sbjct: 828 acctgttcaaatggtgttgg 809
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>gb|AC024882.1| Caenorhabditis elegans cosmid Y9C9A, complete sequence
          Length = 66569

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     gatgaattcttgaaaattaagcga 27
             ||||||||||||||||| ||||||
Sbjct: 60014 gatgaattcttgaaaatgaagcga 60037
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>gb|AC013602.4|AC013602 Homo sapiens, clone RP11-10C6, complete sequence
          Length = 152770

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    aacaagacagacatggttcc 153
              ||||||||||||||||||||
Sbjct: 111271 aacaagacagacatggttcc 111252
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>gb|AC009750.7|AC009750 Drosophila melanogaster, chromosome 2L, region 23F-24A, BAC clone
             BACR15P13, complete sequence
          Length = 187049

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 592   gaagaatagcttcaagctgt 611
             ||||||||||||||||||||
Sbjct: 78850 gaagaatagcttcaagctgt 78869
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>emb|BX815301.1|CNS0AALB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS50ZB07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1954

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 acctgttcaaatggtgttgg 222
           ||||||||||||||||||||
Sbjct: 798 acctgttcaaatggtgttgg 779
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>gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O12 genomic sequence, complete
             sequence
          Length = 39456

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    tggatttagtaataaatcatgaaa 88
             ||||||||||||| ||||||||||
Sbjct: 9978  tggatttagtaatgaatcatgaaa 10001
to top
>gb|AC069550.4|AC069550 Sequence of chromosome 2 clone RP11-471B2 containing Homo sapiens NRXNI
              gene, partial cds, complete sequence
          Length = 166054

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    aacaagacagacatggttcc 153
              ||||||||||||||||||||
Sbjct: 140103 aacaagacagacatggttcc 140122
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>gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, complete sequence
          Length = 200622

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   aacaagacagacatggttcc 153
             ||||||||||||||||||||
Sbjct: 96245 aacaagacagacatggttcc 96264
to top
>gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, complete sequence
          Length = 215485

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   aacaagacagacatggttcc 153
             ||||||||||||||||||||
Sbjct: 98729 aacaagacagacatggttcc 98710
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>gb|AC105029.7| Homo sapiens chromosome 8, clone CTD-2210A23, complete sequence
          Length = 123934

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   gctcatgttgcttgccacaa 354
             ||||||||||||||||||||
Sbjct: 27805 gctcatgttgcttgccacaa 27786
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>gb|AF254136.3| Homo sapiens chromosome 8 clone RP11-386F22, RP11-820H12 map q24.2,
              complete sequence
          Length = 184865

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    aacaagacagacatggttcc 153
              ||||||||||||||||||||
Sbjct: 159177 aacaagacagacatggttcc 159196
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>gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q24.2, complete
             sequence
          Length = 170376

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   aacaagacagacatggttcc 153
             ||||||||||||||||||||
Sbjct: 34385 aacaagacagacatggttcc 34404
to top
>gb|AC011088.8|AC011088 Homo sapiens chromosome 11, clone RP11-292E14, complete sequence
          Length = 164991

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 467  tgataaattcctgaatacat 486
            ||||||||||||||||||||
Sbjct: 8067 tgataaattcctgaatacat 8048
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>dbj|BS000245.1| Pan troglodytes chromosome 22 clone:PTB-059I14, map 22, complete
              sequences
          Length = 201304

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    tgataaattcctgaatacat 486
              ||||||||||||||||||||
Sbjct: 104988 tgataaattcctgaatacat 104969
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>dbj|BS000244.1| Pan troglodytes chromosome 22 clone:PTB-070F15, map 22, complete
              sequences
          Length = 155086

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    tgataaattcctgaatacat 486
              ||||||||||||||||||||
Sbjct: 151737 tgataaattcctgaatacat 151718
to top
>gb|AE003580.3| Drosophila melanogaster chromosome 2L, section 11 of 83 of the complete
              sequence
          Length = 286920

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 592    gaagaatagcttcaagctgt 611
              ||||||||||||||||||||
Sbjct: 191512 gaagaatagcttcaagctgt 191531
to top
>emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chromosome 2, complete
             sequence
          Length = 212028

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 630   ttcagaaatgagatccttgt 649
             ||||||||||||||||||||
Sbjct: 61531 ttcagaaatgagatccttgt 61550
to top
>gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosome 7, complete sequence
          Length = 198860

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    tttccctagcacttcaggcc 273
              ||||||||||||||||||||
Sbjct: 107023 tttccctagcacttcaggcc 107004
to top
>emb|AL672184.13| Mouse DNA sequence from clone RP23-421G11 on chromosome X, complete
              sequence
          Length = 211206

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 518    atgaagaaatggaagtttga 537
              ||||||||||||||||||||
Sbjct: 108098 atgaagaaatggaagtttga 108117


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,081,492
Number of Sequences: 3902068
Number of extensions: 7081492
Number of successful extensions: 142041
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141849
Number of HSP's gapped (non-prelim): 186
length of query: 695
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 672
effective length of database: 17,143,297,704
effective search space: 11520296057088
effective search space used: 11520296057088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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