Clone Name | rbasd13o22 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ310846.1|HVU310846 Hordeum vulgare partial CA7 gene for P-type ATPase Length = 2022 Score = 513 bits (259), Expect = e-142 Identities = 281/287 (97%), Gaps = 1/287 (0%) Strand = Plus / Minus Query: 282 tcactcgcccttctgcttttttaagcgtcgcttggggcctgaagcggtcatgcacctgcc 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2022 tcactcgcccttctgcttttttaagcgtcgcttggggcctgaagcggtcatgcacctgcc 1963 Query: 342 cacgaacttgaggacctcatcgatgagcaccacggggagcgcgacaaggagcaccaggag 401 |||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 1962 cacggacttgaggaccttattgatgagcaccacggggagcgcgacaaggagcaccaggag 1903 Query: 402 ccactcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggcacgtagag 461 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1902 ccacttgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggcacgtagag 1843 Query: 462 gatgaggaagtgcagcccgaacgacaaccgacatggccaggagcagccacgggttgaccc 521 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1842 gatgaggaagtgcagcccgaacgac-accgacatggccaggagcagccacgggttgaccc 1784 Query: 522 acggaggcatcctcagcaggctcgtgtcctcagagagggcgttgaga 568 |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1783 acggaggcatcctcagcaggctcgcgtcctcagagagggcgttgaga 1737
>ref|XM_493908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3168 Score = 218 bits (110), Expect = 2e-53 Identities = 195/222 (87%), Gaps = 1/222 (0%) Strand = Plus / Minus Query: 346 aacttgaggacctcatcgatgagcaccacggggagcgcgacaaggagcaccaggagccac 405 |||||||| ||||| |||||||||||||| ||||| || ||||| | |||||| |||||| Sbjct: 3104 aacttgagaacctcgtcgatgagcaccaccgggagtgcaacaagcaacaccagcagccac 3045 Query: 406 tcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggcacgtagaggatg 465 ||||||| |||||||||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 3044 tcgttcaagctgagcggcacgatgccaaacacttgcgcgaggaacggcacgtagaggatc 2985 Query: 466 aggaagtgcagcccgaacgacaaccgacatggccaggagcagccacgggttgacccacgg 525 | ||| || |||||||||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 2984 aagaaatggagcccgaacgac-actgacatggcgaggagcagccatgggtttacccaagg 2926 Query: 526 aggcatcctcagcaggctcgtgtcctcagagagggcgttgag 567 |||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 2925 aggcatcctcaggaggctagtgtcttcggagagggcgttgag 2884
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 218 bits (110), Expect = 2e-53 Identities = 195/222 (87%), Gaps = 1/222 (0%) Strand = Plus / Minus Query: 346 aacttgaggacctcatcgatgagcaccacggggagcgcgacaaggagcaccaggagccac 405 |||||||| ||||| |||||||||||||| ||||| || ||||| | |||||| |||||| Sbjct: 1025239 aacttgagaacctcgtcgatgagcaccaccgggagtgcaacaagcaacaccagcagccac 1025180 Query: 406 tcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggcacgtagaggatg 465 ||||||| |||||||||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 1025179 tcgttcaagctgagcggcacgatgccaaacacttgcgcgaggaacggcacgtagaggatc 1025120 Query: 466 aggaagtgcagcccgaacgacaaccgacatggccaggagcagccacgggttgacccacgg 525 | ||| || |||||||||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 1025119 aagaaatggagcccgaacgac-actgacatggcgaggagcagccatgggtttacccaagg 1025061 Query: 526 aggcatcctcagcaggctcgtgtcctcagagagggcgttgag 567 |||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 1025060 aggcatcctcaggaggctagtgtcttcggagagggcgttgag 1025019
>dbj|AK062874.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-C10, full insert sequence Length = 1163 Score = 218 bits (110), Expect = 2e-53 Identities = 195/222 (87%), Gaps = 1/222 (0%) Strand = Plus / Minus Query: 346 aacttgaggacctcatcgatgagcaccacggggagcgcgacaaggagcaccaggagccac 405 |||||||| ||||| |||||||||||||| ||||| || ||||| | |||||| |||||| Sbjct: 784 aacttgagaacctcgtcgatgagcaccaccgggagtgcaacaagcaacaccagcagccac 725 Query: 406 tcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggcacgtagaggatg 465 ||||||| |||||||||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 724 tcgttcaagctgagcggcacgatgccaaacacttgcgcgaggaacggcacgtagaggatc 665 Query: 466 aggaagtgcagcccgaacgacaaccgacatggccaggagcagccacgggttgacccacgg 525 | ||| || |||||||||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 664 aagaaatggagcccgaacgac-actgacatggcgaggagcagccatgggtttacccaagg 606 Query: 526 aggcatcctcagcaggctcgtgtcctcagagagggcgttgag 567 |||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 605 aggcatcctcaggaggctagtgtcttcggagagggcgttgag 564
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 218 bits (110), Expect = 2e-53 Identities = 195/222 (87%), Gaps = 1/222 (0%) Strand = Plus / Minus Query: 346 aacttgaggacctcatcgatgagcaccacggggagcgcgacaaggagcaccaggagccac 405 |||||||| ||||| |||||||||||||| ||||| || ||||| | |||||| |||||| Sbjct: 115636 aacttgagaacctcgtcgatgagcaccaccgggagtgcaacaagcaacaccagcagccac 115577 Query: 406 tcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggcacgtagaggatg 465 ||||||| |||||||||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 115576 tcgttcaagctgagcggcacgatgccaaacacttgcgcgaggaacggcacgtagaggatc 115517 Query: 466 aggaagtgcagcccgaacgacaaccgacatggccaggagcagccacgggttgacccacgg 525 | ||| || |||||||||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 115516 aagaaatggagcccgaacgac-actgacatggcgaggagcagccatgggtttacccaagg 115458 Query: 526 aggcatcctcagcaggctcgtgtcctcagagagggcgttgag 567 |||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 115457 aggcatcctcaggaggctagtgtcttcggagagggcgttgag 115416
>gb|AF096871.1|AF096871 Zea mays calcium ATPase (cap1) mRNA, complete cds Length = 3310 Score = 127 bits (64), Expect = 4e-26 Identities = 171/204 (83%), Gaps = 7/204 (3%) Strand = Plus / Minus Query: 334 cacctgcccacgaacttgaggacctcatcgatgagcaccacggggagcgcgac---aagg 390 ||||||||| ||| |||||| |||| |||||||||||||| ||||| || || || Sbjct: 3038 cacctgcccgcgagcttgagagcctcgtcgatgagcaccaccgggagagccaccatcagc 2979 Query: 391 agcaccagg---agccactcgttcaggctgagcggcacgatgccgaacacctgtgcaagg 447 || |||||| ||||||||||| ||||||||||| ||||||||||||||| || || Sbjct: 2978 aggaccaggctcagccactcgttgaggctgagcgggacgatgccgaacaccgtggcgagc 2919 Query: 448 aacggcacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccaggagcag 507 | |||||||||||||||||||||||| || |||||||| ||||||||||| | |||||| Sbjct: 2918 agcggcacgtagaggatgaggaagtggaggccgaacga-gaccgacatggcgacgagcag 2860 Query: 508 ccacgggttgacccacggaggcat 531 ||||||||||||||| || ||||| Sbjct: 2859 ccacgggttgacccagggcggcat 2836
>gb|AY110521.1| Zea mays CL302_2 mRNA sequence Length = 899 Score = 95.6 bits (48), Expect = 2e-16 Identities = 121/144 (84%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 393 caccaggagccactcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacgg 452 ||||| |||||| ||||||| ||||| |||||||| || ||||| || || ||||| || Sbjct: 572 caccaagagccattcgttcaaactgaggggcacgatcccaaacacttgagcgaggaaagg 513 Query: 453 cacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccaggagcagccacg 512 |||||||||||| | ||| ||||||||||| || ||||||||||||||| || ||||||| Sbjct: 512 cacgtagaggatcaagaaatgcagcccgaaaga-aaccgacatggccagaagaagccacg 454 Query: 513 ggttgacccacggaggcatcctca 536 | || ||||| || ||||| |||| Sbjct: 453 gattaacccatggtggcatgctca 430
>ref|XM_493828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3284 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/102 (87%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 442 gcaaggaacggcacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccag 501 |||||||| |||||||||||||| | ||| ||||||||||| || ||||||||| ||||| Sbjct: 3032 gcaaggaatggcacgtagaggatcaagaaatgcagcccgaatga-aaccgacattgccag 2974 Query: 502 gagcagccacgggttgacccacggaggcatcctcagcaggct 543 || ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 2973 aagaagccaagggttaacccacggaggcatgctcagaaggct 2932
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/102 (87%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 442 gcaaggaacggcacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccag 501 |||||||| |||||||||||||| | ||| ||||||||||| || ||||||||| ||||| Sbjct: 9608353 gcaaggaatggcacgtagaggatcaagaaatgcagcccgaatga-aaccgacattgccag 9608411 Query: 502 gagcagccacgggttgacccacggaggcatcctcagcaggct 543 || ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 9608412 aagaagccaagggttaacccacggaggcatgctcagaaggct 9608453
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/102 (87%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 442 gcaaggaacggcacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccag 501 |||||||| |||||||||||||| | ||| ||||||||||| || ||||||||| ||||| Sbjct: 29252 gcaaggaatggcacgtagaggatcaagaaatgcagcccgaatga-aaccgacattgccag 29310 Query: 502 gagcagccacgggttgacccacggaggcatcctcagcaggct 543 || ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 29311 aagaagccaagggttaacccacggaggcatgctcagaaggct 29352
>gb|DQ077152.1| Oryza sativa (indica cultivar-group) Ca2+-ATPase mRNA, partial cds Length = 2908 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/102 (87%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 442 gcaaggaacggcacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccag 501 |||||||| |||||||||||||| | ||| ||||||||||| || ||||||||| ||||| Sbjct: 2483 gcaaggaatggcacgtagaggatcaagaaatgcagcccgaatga-aaccgacattgccag 2425 Query: 502 gagcagccacgggttgacccacggaggcatcctcagcaggct 543 || ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 2424 aagaagccaagggttaacccacggaggcatgctcagaaggct 2383
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/102 (87%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 442 gcaaggaacggcacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccag 501 |||||||| |||||||||||||| | ||| ||||||||||| || ||||||||| ||||| Sbjct: 9606474 gcaaggaatggcacgtagaggatcaagaaatgcagcccgaatga-aaccgacattgccag 9606532 Query: 502 gagcagccacgggttgacccacggaggcatcctcagcaggct 543 || ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 9606533 aagaagccaagggttaacccacggaggcatgctcagaaggct 9606574
>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009C19, from chromosome 3, complete sequence Length = 131709 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/102 (87%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 442 gcaaggaacggcacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccag 501 |||||||| |||||||||||||| | ||| ||||||||||| || ||||||||| ||||| Sbjct: 4333 gcaaggaatggcacgtagaggatcaagaaatgcagcccgaatga-aaccgacattgccag 4275 Query: 502 gagcagccacgggttgacccacggaggcatcctcagcaggct 543 || ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 4274 aagaagccaagggttaacccacggaggcatgctcagaaggct 4233
>dbj|AK105840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F07, full insert sequence Length = 1255 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/102 (87%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 442 gcaaggaacggcacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccag 501 |||||||| |||||||||||||| | ||| ||||||||||| || ||||||||| ||||| Sbjct: 844 gcaaggaatggcacgtagaggatcaagaaatgcagcccgaatga-aaccgacattgccag 786 Query: 502 gagcagccacgggttgacccacggaggcatcctcagcaggct 543 || ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 785 aagaagccaagggttaacccacggaggcatgctcagaaggct 744
>gb|U82966.1|OSU82966 Oryza sativa Ca2+-ATPase gene, complete cds Length = 5998 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/102 (87%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 442 gcaaggaacggcacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccag 501 |||||||| |||||||||||||| | ||| ||||||||||| || ||||||||| ||||| Sbjct: 5394 gcaaggaatggcacgtagaggatcaagaaatgcagcccgaatga-aaccgacattgccag 5336 Query: 502 gagcagccacgggttgacccacggaggcatcctcagcaggct 543 || ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 5335 aagaagccaagggttaacccacggaggcatgctcagaaggct 5294
>emb|AJ310845.1|HVU310845 Hordeum vulgare partial CA6 gene for P-type ATPase Length = 2019 Score = 56.0 bits (28), Expect = 1e-04 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 444 aaggaacggcacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccagga 503 |||||| |||||||||||||| | || || ||||| || ||| |||||||| ||||| | Sbjct: 1860 aaggaagggcacgtagaggatcaaaaaatgaagcccaaaagac-accgacattgccagaa 1802 Query: 504 gcagccacgggttgacccacggaggcatcctcagcaggct 543 | ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 1801 gaagccaggggttcacccatggaggcatgctcagaaggct 1762
>gb|AY110028.1| Zea mays CL302_1 mRNA sequence Length = 1651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 89/108 (82%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 393 caccaggagccactcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacgg 452 ||||| |||||| ||||||| ||||| ||||| || || ||||| || || ||||| || Sbjct: 1297 caccaagagccattcgttcaaactgaggggcacaatcccaaacacttgagccaggaaagg 1238 Query: 453 cacgtagaggatgaggaagtgcagcccgaacgacaaccgacatggcca 500 |||||||||||| | ||| |||||||| || || ||| |||||||||| Sbjct: 1237 cacgtagaggatcaagaaatgcagcccaaaaga-aacggacatggcca 1191
>ref|NM_100655.3| Arabidopsis thaliana ECA1; calcium-transporting ATPase AT1G07810 (ECA1) mRNA, complete cds Length = 3499 Score = 54.0 bits (27), Expect = 5e-04 Identities = 112/139 (80%), Gaps = 1/139 (0%) Strand = Plus / Minus Query: 394 accaggagccactcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggc 453 ||||| ||||||||||||| ||| || ||||| || || || ||||| || ||||| ||| Sbjct: 3196 accagcagccactcgttcaagctcagtggcactatcccaaatacctgagccaggaatggc 3137 Query: 454 acgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccaggagcagccacgg 513 ||||| || || | ||||| |||||||| || || | ||| |||||||| | |||||| Sbjct: 3136 acgtacagtatcacaaagtggagcccgaatga-gacagccatagccaggagtaaccacgg 3078 Query: 514 gttgacccacggaggcatc 532 ||| |||||||| |||||| Sbjct: 3077 gttcacccacggcggcatc 3059
>ref|NM_100640.2| Arabidopsis thaliana calcium-transporting ATPase AT1G07670 mRNA, complete cds Length = 2594 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 497 gccaggagcagccacgggttgacccacggaggcatcctcagcaggct 543 |||||||||||||||||||| ||||| || |||||| ||| |||||| Sbjct: 2121 gccaggagcagccacgggttaacccagggtggcatcgtcaccaggct 2075
>emb|Y09817.1|ATCA2ATPS A.thaliana mRNA for putative Ca2+-ATPase, partial Length = 1513 Score = 54.0 bits (27), Expect = 5e-04 Identities = 112/139 (80%), Gaps = 1/139 (0%) Strand = Plus / Minus Query: 394 accaggagccactcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggc 453 ||||| ||||||||||||| ||| || ||||| || || || ||||| || ||||| ||| Sbjct: 1185 accagcagccactcgttcaagctcagtggcactatcccaaatacctgagccaggaatggc 1126 Query: 454 acgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccaggagcagccacgg 513 ||||| || || | ||||| |||||||| || || | ||| |||||||| | |||||| Sbjct: 1125 acgtacagtatcacaaagtggagcccgaatga-gacagccatagccaggagtaaccacgg 1067 Query: 514 gttgacccacggaggcatc 532 ||| |||||||| |||||| Sbjct: 1066 gttcacccacggcggcatc 1048
>gb|AY128332.1| Arabidopsis thaliana endoplasmic reticulum-type calcium-transporting ATPase 4 (At1g07670) mRNA, complete cds Length = 1342 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 497 gccaggagcagccacgggttgacccacggaggcatcctcagcaggct 543 |||||||||||||||||||| ||||| || |||||| ||| |||||| Sbjct: 930 gccaggagcagccacgggttaacccagggtggcatcgtcaccaggct 884
>gb|AC007583.2|F24B9 Arabidopsis thaliana chromosome 1 BAC F24B9 sequence, complete sequence Length = 107234 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 497 gccaggagcagccacgggttgacccacggaggcatcctcagcaggct 543 |||||||||||||||||||| ||||| || |||||| ||| |||||| Sbjct: 74707 gccaggagcagccacgggttaacccagggtggcatcgtcaccaggct 74661 Score = 54.0 bits (27), Expect = 5e-04 Identities = 112/139 (80%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 394 accaggagccactcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggc 453 ||||| ||||||||||||| ||| || ||||| || || || ||||| || ||||| ||| Sbjct: 24778 accagcagccactcgttcaagctcagtggcactatcccaaatacctgagccaggaatggc 24837 Query: 454 acgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccaggagcagccacgg 513 ||||| || || | ||||| |||||||| || || | ||| |||||||| | |||||| Sbjct: 24838 acgtacagtatcacaaagtggagcccgaatga-gacagccatagccaggagtaaccacgg 24896 Query: 514 gttgacccacggaggcatc 532 ||| |||||||| |||||| Sbjct: 24897 gttcacccacggcggcatc 24915
>gb|AF116533.1|AF116533 Arabidopsis thaliana endoplasmic reticulum-type calcium-transporting ATPase 1 (ECA1) gene, complete cds Length = 4855 Score = 54.0 bits (27), Expect = 5e-04 Identities = 112/139 (80%), Gaps = 1/139 (0%) Strand = Plus / Minus Query: 394 accaggagccactcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggc 453 ||||| ||||||||||||| ||| || ||||| || || || ||||| || ||||| ||| Sbjct: 4137 accagcagccactcgttcaagctcagtggcactatcccaaatacctgagccaggaatggc 4078 Query: 454 acgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccaggagcagccacgg 513 ||||| || || | ||||| |||||||| || || | ||| |||||||| | |||||| Sbjct: 4077 acgtacagtatcacaaagtggagcccgaatga-gacagccatagccaggagtaaccacgg 4019 Query: 514 gttgacccacggaggcatc 532 ||| |||||||| |||||| Sbjct: 4018 gttcacccacggcggcatc 4000
>gb|U96455.1|ATU96455 Arabidopsis thaliana ER-type Ca2+-pumping ATPase (ECA1) mRNA, complete cds Length = 3475 Score = 54.0 bits (27), Expect = 5e-04 Identities = 112/139 (80%), Gaps = 1/139 (0%) Strand = Plus / Minus Query: 394 accaggagccactcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggc 453 ||||| ||||||||||||| ||| || ||||| || || || ||||| || ||||| ||| Sbjct: 3139 accagcagccactcgttcaagctcagtggcactatcccaaatacctgagccaggaatggc 3080 Query: 454 acgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccaggagcagccacgg 513 ||||| || || | ||||| |||||||| || || | ||| |||||||| | |||||| Sbjct: 3079 acgtacagtatcacaaagtggagcccgaatga-gacagccatagccaggagtaaccacgg 3021 Query: 514 gttgacccacggaggcatc 532 ||| |||||||| |||||| Sbjct: 3020 gttcacccacggcggcatc 3002
>gb|U93845.1|ATU93845 Arabidopsis thaliana ER-type calcium pump (ACA3) mRNA, complete cds Length = 3367 Score = 54.0 bits (27), Expect = 5e-04 Identities = 112/139 (80%), Gaps = 1/139 (0%) Strand = Plus / Minus Query: 394 accaggagccactcgttcaggctgagcggcacgatgccgaacacctgtgcaaggaacggc 453 ||||| ||||||||||||| ||| || ||||| || || || ||||| || ||||| ||| Sbjct: 3143 accagcagccactcgttcaagctcagtggcactatcccaaatacctgagccaggaatggc 3084 Query: 454 acgtagaggatgaggaagtgcagcccgaacgacaaccgacatggccaggagcagccacgg 513 ||||| || || | ||||| |||||||| || || | ||| |||||||| | |||||| Sbjct: 3083 acgtacagtatcacaaagtggagcccgaatga-gacagccatagccaggagtaaccacgg 3025 Query: 514 gttgacccacggaggcatc 532 ||| |||||||| |||||| Sbjct: 3024 gttcacccacggcggcatc 3006
>emb|X52496.1|OCCAATP Rabbit mRNA for calcium ATPase Length = 4472 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtgcag 476 ||||||||||||||||||||||| Sbjct: 3361 acgtagaggatgaggaagtgcag 3339
>emb|X02814.1|OCATPDR Rabbit mRNA for Ca2+-ATPase Length = 3722 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtgcag 476 ||||||||||||||||||||||| Sbjct: 2974 acgtagaggatgaggaagtgcag 2952
>gb|AF117125.1|AF117125 Arabidopsis thaliana endoplasmic reticulum-type calcium-transporting ATPase 4 (ECA4) mRNA, partial cds Length = 2534 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 497 gccaggagcagccacgggttgacccacggaggcatcctcagcaggct 543 |||||||||||||| ||||| ||||| || |||||| ||| |||||| Sbjct: 2121 gccaggagcagccaagggttaacccagggtggcatcgtcaccaggct 2075
>gb|J04703.1|RABACATP Rabbit smooth muscle sarco(endo)plasmic calcium-ATPase mRNA, complete cds Length = 4141 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtgcag 476 ||||||||||||||||||||||| Sbjct: 3038 acgtagaggatgaggaagtgcag 3016
>emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chromosome 15, complete sequence Length = 196812 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 gaggcatcctcagcaggctcgt 546 |||||||||||||||||||||| Sbjct: 145139 gaggcatcctcagcaggctcgt 145160
>ref|XM_866816.1| PREDICTED: Bos taurus similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 3 (LOC518117), mRNA Length = 4086 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 cacgtagaggatgaggaagtg 473 ||||||||||||||||||||| Sbjct: 2958 cacgtagaggatgaggaagtg 2938
>ref|XM_879115.1| PREDICTED: Bos taurus similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 10 (LOC518117), mRNA Length = 4050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 cacgtagaggatgaggaagtg 473 ||||||||||||||||||||| Sbjct: 2877 cacgtagaggatgaggaagtg 2857
>ref|XM_879088.1| PREDICTED: Bos taurus similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 9 (LOC518117), mRNA Length = 4095 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 cacgtagaggatgaggaagtg 473 ||||||||||||||||||||| Sbjct: 2922 cacgtagaggatgaggaagtg 2902
>ref|XM_879057.1| PREDICTED: Bos taurus similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 8 (LOC518117), mRNA Length = 4137 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 cacgtagaggatgaggaagtg 473 ||||||||||||||||||||| Sbjct: 2964 cacgtagaggatgaggaagtg 2944
>ref|XM_879022.1| PREDICTED: Bos taurus similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 7 (LOC518117), mRNA Length = 4116 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 cacgtagaggatgaggaagtg 473 ||||||||||||||||||||| Sbjct: 2943 cacgtagaggatgaggaagtg 2923
>ref|XM_878994.1| PREDICTED: Bos taurus similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 6 (LOC518117), mRNA Length = 4122 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 cacgtagaggatgaggaagtg 473 ||||||||||||||||||||| Sbjct: 2949 cacgtagaggatgaggaagtg 2929
>ref|XM_878969.1| PREDICTED: Bos taurus similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 5 (LOC518117), mRNA Length = 4041 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 cacgtagaggatgaggaagtg 473 ||||||||||||||||||||| Sbjct: 2868 cacgtagaggatgaggaagtg 2848
>ref|XM_878941.1| PREDICTED: Bos taurus similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 4 (LOC518117), mRNA Length = 4131 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 cacgtagaggatgaggaagtg 473 ||||||||||||||||||||| Sbjct: 2958 cacgtagaggatgaggaagtg 2938
>ref|XM_596301.2| PREDICTED: Bos taurus similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 2 (LOC518117), mRNA Length = 3982 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 cacgtagaggatgaggaagtg 473 ||||||||||||||||||||| Sbjct: 2809 cacgtagaggatgaggaagtg 2789
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 agcggcacgatgccgaacacc 438 ||||||||||||||||||||| Sbjct: 3446033 agcggcacgatgccgaacacc 3446053
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 accgacatggccaggagcagc 508 ||||||||||||||||||||| Sbjct: 790370 accgacatggccaggagcagc 790350
>dbj|AB168545.1| Macaca fascicularis testis cDNA clone: QtsA-12913, similar to human ATPase, Ca++ transporting, cardiac muscle, fast twitch 1(ATP2A1), transcript variant a, mRNA, RefSeq: NM_173201.1 Length = 2704 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 gtagaggatgaggaagtgcag 476 ||||||||||||||||||||| Sbjct: 2266 gtagaggatgaggaagtgcag 2246
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 418 agcggcacgatgccgaacacc 438 ||||||||||||||||||||| Sbjct: 2715948 agcggcacgatgccgaacacc 2715928
>ref|XM_510905.1| PREDICTED: Pan troglodytes LOC454019 (LOC454019), mRNA Length = 6318 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 5993 tagaggatgaggaagtgcag 5974
>ref|XM_476772.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1998 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 aggagccactcgttcaggct 416 |||||||||||||||||||| Sbjct: 928 aggagccactcgttcaggct 947
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 cgaacacctgtgcaaggaac 450 |||||||||||||||||||| Sbjct: 2803171 cgaacacctgtgcaaggaac 2803190
>ref|NM_004320.3| Homo sapiens ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 (ATP2A1), transcript variant b, mRNA Length = 3570 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 3030 tagaggatgaggaagtgcag 3011
>ref|NM_173201.2| Homo sapiens ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 (ATP2A1), transcript variant a, mRNA Length = 3528 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 3030 tagaggatgaggaagtgcag 3011
>gb|AY576796.1| Actinoplanes phage phiAsp2, complete genome Length = 58638 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 gagcaccacggggagcgcga 385 |||||||||||||||||||| Sbjct: 49046 gagcaccacggggagcgcga 49065
>gb|AC163492.3| Mus musculus chromosome 18, clone RP23-411L20, complete sequence Length = 201822 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gtttcttatatatattatac 155 |||||||||||||||||||| Sbjct: 132832 gtttcttatatatattatac 132813
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 gaagtgcagcccgaacgacaaccg 491 |||||||||||||||||| ||||| Sbjct: 2480066 gaagtgcagcccgaacgagaaccg 2480043
>gb|BC025794.1| Homo sapiens zinc finger protein 496, mRNA (cDNA clone IMAGE:3537429), partial cds Length = 3878 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 gacaaggagcaccaggagcc 403 |||||||||||||||||||| Sbjct: 3411 gacaaggagcaccaggagcc 3392
>gb|AC109460.3| Homo sapiens chromosome 16 clone RP11-264B17, complete sequence Length = 163424 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 35684 tagaggatgaggaagtgcag 35665
>ref|XM_855027.1| PREDICTED: Canis familiaris similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 13 (LOC479797), mRNA Length = 3493 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaacttgaggacctcatcga 364 |||||||||||||||||||| Sbjct: 3132 gaacttgaggacctcatcga 3113 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtg 473 |||||||||||||||||||| Sbjct: 3023 acgtagaggatgaggaagtg 3004
>ref|XM_854994.1| PREDICTED: Canis familiaris similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 12 (LOC479797), mRNA Length = 3720 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaacttgaggacctcatcga 364 |||||||||||||||||||| Sbjct: 2885 gaacttgaggacctcatcga 2866 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtg 473 |||||||||||||||||||| Sbjct: 2776 acgtagaggatgaggaagtg 2757
>ref|XM_536925.2| PREDICTED: Canis familiaris similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 1 (LOC479797), mRNA Length = 4190 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaacttgaggacctcatcga 364 |||||||||||||||||||| Sbjct: 3355 gaacttgaggacctcatcga 3336 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtg 473 |||||||||||||||||||| Sbjct: 3246 acgtagaggatgaggaagtg 3227
>ref|XM_854880.1| PREDICTED: Canis familiaris similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 10 (LOC479797), mRNA Length = 3946 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaacttgaggacctcatcga 364 |||||||||||||||||||| Sbjct: 3111 gaacttgaggacctcatcga 3092 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtg 473 |||||||||||||||||||| Sbjct: 3002 acgtagaggatgaggaagtg 2983
>ref|XM_854843.1| PREDICTED: Canis familiaris similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 9 (LOC479797), mRNA Length = 3961 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaacttgaggacctcatcga 364 |||||||||||||||||||| Sbjct: 3126 gaacttgaggacctcatcga 3107 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtg 473 |||||||||||||||||||| Sbjct: 3017 acgtagaggatgaggaagtg 2998
>ref|XM_854810.1| PREDICTED: Canis familiaris similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 8 (LOC479797), mRNA Length = 3940 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaacttgaggacctcatcga 364 |||||||||||||||||||| Sbjct: 3105 gaacttgaggacctcatcga 3086 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtg 473 |||||||||||||||||||| Sbjct: 2996 acgtagaggatgaggaagtg 2977
>ref|XM_854774.1| PREDICTED: Canis familiaris similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 7 (LOC479797), mRNA Length = 3850 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaacttgaggacctcatcga 364 |||||||||||||||||||| Sbjct: 3015 gaacttgaggacctcatcga 2996 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtg 473 |||||||||||||||||||| Sbjct: 2906 acgtagaggatgaggaagtg 2887
>ref|XM_854739.1| PREDICTED: Canis familiaris similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 6 (LOC479797), mRNA Length = 3916 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaacttgaggacctcatcga 364 |||||||||||||||||||| Sbjct: 3081 gaacttgaggacctcatcga 3062 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtg 473 |||||||||||||||||||| Sbjct: 2972 acgtagaggatgaggaagtg 2953
>ref|XM_854707.1| PREDICTED: Canis familiaris similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 5 (LOC479797), mRNA Length = 2678 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaacttgaggacctcatcga 364 |||||||||||||||||||| Sbjct: 1843 gaacttgaggacctcatcga 1824 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtg 473 |||||||||||||||||||| Sbjct: 1734 acgtagaggatgaggaagtg 1715
>ref|XM_844684.1| PREDICTED: Canis familiaris similar to ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, transcript variant 3 (LOC479797), mRNA Length = 3967 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaacttgaggacctcatcga 364 |||||||||||||||||||| Sbjct: 3132 gaacttgaggacctcatcga 3113 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtg 473 |||||||||||||||||||| Sbjct: 3023 acgtagaggatgaggaagtg 3004
>ref|XM_671603.1| Plasmodium berghei strain ANKA hypothetical protein (PB403079.00.0) partial mRNA Length = 105 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tctaccccagtttcttatat 146 |||||||||||||||||||| Sbjct: 74 tctaccccagtttcttatat 93
>ref|NM_205519.1| Gallus gallus ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 (ATP2A1), mRNA Length = 3189 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtgcagc 477 ||||||||||||| |||||||||| Sbjct: 2870 acgtagaggatgacgaagtgcagc 2847
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgtctggaataaccgctgtt 267 |||||||||||||||||||| Sbjct: 1784218 cgtctggaataaccgctgtt 1784237
>gb|BC104452.1| Homo sapiens ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, mRNA (cDNA clone IMAGE:40028638) Length = 410 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 67 tagaggatgaggaagtgcag 48
>gb|BC104453.1| Homo sapiens ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, mRNA (cDNA clone IMAGE:40028644) Length = 410 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 67 tagaggatgaggaagtgcag 48
>emb|AL353693.19| Human DNA sequence from clone RP11-470P21 on chromosome 9 Contains part of the APBA1 gene for myloid beta (A4) precursor protein-binding, family A, member 1 (X11) and one CpG island, complete sequence Length = 63701 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 30270 tagaggatgaggaagtgcag 30289
>emb|AL161941.18| Human DNA sequence from clone RP11-494B22 on chromosome 20 Contains the PPIP11 gene for peptidylprolyl isomerase (cyclophilin) pseudogene 11 and a CpG island, complete sequence Length = 81304 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 caaggagcaccaggagccac 405 |||||||||||||||||||| Sbjct: 62744 caaggagcaccaggagccac 62725
>emb|CR407563.8| Zebrafish DNA sequence from clone DKEY-252G21 in linkage group 8, complete sequence Length = 109914 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 92097 tagaggatgaggaagtgcag 92078
>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2 Length = 198354 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 cagtttcttatatatattat 153 |||||||||||||||||||| Sbjct: 6752 cagtttcttatatatattat 6733
>emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1 Length = 206420 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 cagtttcttatatatattat 153 |||||||||||||||||||| Sbjct: 205008 cagtttcttatatatattat 204989
>emb|BX537784.1|HSM805873 Homo sapiens mRNA; cDNA DKFZp779O2152 (from clone DKFZp779O2152); complete cds Length = 3622 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 3028 tagaggatgaggaagtgcag 3009
>emb|BX537389.1|HSM805686 Homo sapiens mRNA; cDNA DKFZp779G2251 (from clone DKFZp779G2251); complete cds Length = 3501 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 3026 tagaggatgaggaagtgcag 3007
>gb|AY129333.1| Mycobacterium phage Che9c, complete sequence Length = 57050 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 gcggcacgatgccgaacacc 438 |||||||||||||||||||| Sbjct: 15483 gcggcacgatgccgaacacc 15464
>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86 Length = 198780 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 cagtttcttatatatattat 153 |||||||||||||||||||| Sbjct: 50226 cagtttcttatatatattat 50245
>gb|AC104335.2| Homo sapiens chromosome 1 clone RP11-433K2, complete sequence Length = 212426 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 gacaaggagcaccaggagcc 403 |||||||||||||||||||| Sbjct: 67090 gacaaggagcaccaggagcc 67109
>emb|BX647480.1|HSM807626 Homo sapiens mRNA; cDNA DKFZp686I07110 (from clone DKFZp686I07110) Length = 8522 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 gacaaggagcaccaggagcc 403 |||||||||||||||||||| Sbjct: 8036 gacaaggagcaccaggagcc 8017
>dbj|AK128456.1| Homo sapiens cDNA FLJ46599 fis, clone THYMU3047115, highly similar to Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC 3.6.3.8) Length = 3130 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 2669 tagaggatgaggaagtgcag 2650
>dbj|AK092691.1| Homo sapiens cDNA FLJ35372 fis, clone SKMUS2001742, highly similar to CALCIUM-TRANSPORTING ATPASE SARCOPLASMIC RETICULUM TYPE, FAST TWITCH SKELETAL MUSCLE, ADULT ISOFORM (EC 3.6.1.38) Length = 1288 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 827 tagaggatgaggaagtgcag 808
>ref|XM_942592.1| PREDICTED: Homo sapiens similar to ATPase, Ca++ transporting, fast twitch 1 isoform b (LOC652876), mRNA Length = 1131 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 1052 tagaggatgaggaagtgcag 1033
>gb|U96781.1|SEG_HSATP2A1S9 Human Ca2+ ATPase of fast-twitch skeletal muscle sarcoplasmic reticulum adult and neonatal isoforms (ATP2A1) gene, exons 16 to 23 and complete cds Length = 3040 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 1496 tagaggatgaggaagtgcag 1477
>gb|BC045327.1| Danio rerio ATPase, Ca++ transporting, cardiac muscle, slow twitch 2, mRNA (cDNA clone MGC:55380 IMAGE:2601981), complete cds Length = 3738 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 3055 tagaggatgaggaagtgcag 3036
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 aggagccactcgttcaggct 416 |||||||||||||||||||| Sbjct: 3831258 aggagccactcgttcaggct 3831277
>ref|NM_200965.1| Danio rerio ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 (atp2a2), mRNA Length = 3738 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 3055 tagaggatgaggaagtgcag 3036
>gb|AC018767.3|AC018767 Homo sapiens chromosome 16 clone RP11-279O17, complete sequence Length = 159857 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 ccccagtttcttatatatat 150 |||||||||||||||||||| Sbjct: 28907 ccccagtttcttatatatat 28926
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 aggagccactcgttcaggct 416 |||||||||||||||||||| Sbjct: 70370 aggagccactcgttcaggct 70389
>dbj|BS000005.1| Pan troglodytes chromosome 22 clone:PTB-258H22, map 22, complete sequences Length = 8890 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 aaacaagaacagagctgcta 79 |||||||||||||||||||| Sbjct: 7625 aaacaagaacagagctgcta 7606
>emb|BX648544.1|HSM808692 Homo sapiens mRNA; cDNA DKFZp779D1555 (from clone DKFZp779D1555) Length = 3513 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 3027 tagaggatgaggaagtgcag 3008
>emb|BX647368.1|HSM807513 Homo sapiens mRNA; cDNA DKFZp779N0459 (from clone DKFZp779N0459) Length = 2544 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 2066 tagaggatgaggaagtgcag 2047
>emb|BX647367.1|HSM807512 Homo sapiens mRNA; cDNA DKFZp779A1459 (from clone DKFZp779A1459) Length = 3511 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 3030 tagaggatgaggaagtgcag 3011
>emb|BX647366.1|HSM807511 Homo sapiens mRNA; cDNA DKFZp779N0852 (from clone DKFZp779N0852) Length = 3503 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 3022 tagaggatgaggaagtgcag 3003
>emb|BX647365.1|HSM807510 Homo sapiens mRNA; cDNA DKFZp779M0152 (from clone DKFZp779M0152) Length = 3518 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tagaggatgaggaagtgcag 476 |||||||||||||||||||| Sbjct: 3026 tagaggatgaggaagtgcag 3007
>dbj|AK024643.1| Homo sapiens cDNA: FLJ20990 fis, clone CAE01666 Length = 3074 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 gacaaggagcaccaggagcc 403 |||||||||||||||||||| Sbjct: 2590 gacaaggagcaccaggagcc 2571
>dbj|AK103352.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126I17, full insert sequence Length = 1997 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 aggagccactcgttcaggct 416 |||||||||||||||||||| Sbjct: 927 aggagccactcgttcaggct 946
>gb|AC006557.2|AC006557 Homo sapiens chromosome 18, clone hRPK.411_B_10, complete sequence Length = 154589 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 aaacaagaacagagctgcta 79 |||||||||||||||||||| Sbjct: 13924 aaacaagaacagagctgcta 13905
>emb|AL133592.1|HSM801445 Homo sapiens mRNA; cDNA DKFZp434O119 (from clone DKFZp434O119) Length = 1073 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 gacaaggagcaccaggagcc 403 |||||||||||||||||||| Sbjct: 596 gacaaggagcaccaggagcc 577
>gb|M26064.1|CHKATPCA Chicken Ca2+ ATPase, complete cds Length = 3189 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtgcagc 477 ||||||||||||| |||||||||| Sbjct: 2870 acgtagaggatgacgaagtgcagc 2847
>gb|M12898.1|RABATPAA Rabbit Ca2+ ATPase mRNA, complete cds Length = 3317 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 acgtagaggatgaggaagtg 473 |||||||||||||||||||| Sbjct: 2930 acgtagaggatgaggaagtg 2911
>dbj|AP001004.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-681B3, complete sequence Length = 182424 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 aaacaagaacagagctgcta 79 |||||||||||||||||||| Sbjct: 77104 aaacaagaacagagctgcta 77123 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,232,153 Number of Sequences: 3902068 Number of extensions: 4232153 Number of successful extensions: 92236 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 91811 Number of HSP's gapped (non-prelim): 411 length of query: 568 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 545 effective length of database: 17,143,297,704 effective search space: 9343097248680 effective search space used: 9343097248680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)