ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14d18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CP11A_PIG (P10612) Cytochrome P450 11A1, mitochondrial precursor... 31 4.3
2MAK2_SCHPO (O14002) Peroxide stress-activated histidine kinase m... 30 7.3

>CP11A_PIG (P10612) Cytochrome P450 11A1, mitochondrial precursor (EC|
           1.14.15.6) (CYPXIA1) (P450(scc)) (Cholesterol side-chain
           cleavage enzyme) (Cholesterol desmolase)
          Length = 520

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 467 DGYTAVFRFDKERGILEIPANENLRFSHHIPSYRLTEEKGDTLRGFYELDPASVPDAFLV 288
           +G+  ++RF KE+G  +I  +    F  + P YR   EK   L   Y +DP  V   F  
Sbjct: 57  NGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYR---EKLGNLESVYIIDPEDVALLFKF 113

Query: 287 RG 282
            G
Sbjct: 114 EG 115



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>MAK2_SCHPO (O14002) Peroxide stress-activated histidine kinase mak2 (EC|
            2.7.13.3) (Mcs4-associated kinase 2) (His-Asp
            phosphorelay kinase phk1)
          Length = 2310

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +3

Query: 387  RKPQVLICRNLQNTPFFVKPEHSCVT----VYWSQKRELCAS 500
            RKP+ L+  +  ++  FV  + S V     +YW  KRELC++
Sbjct: 1012 RKPEFLLRISQVDSDLFVIKDRSAVAHAELIYWGLKRELCST 1053


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,935,984
Number of Sequences: 219361
Number of extensions: 1935188
Number of successful extensions: 4537
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4535
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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