ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB032839.1| Hordeum vulgare HVP1 mRNA for vacuolar proton-in... 577 e-162
2gb|AY255181.1| Hordeum brevisubulatum vacuolar proton-inorganic ... 309 3e-81
3emb|CT009551.8| Pig DNA sequence from clone CH242-214G8 on chrom... 42 0.99
4emb|AL022304.1|SPBC18H10 S.pombe chromosome II cosmid c18H10 42 0.99
5emb|AJ000318.1|SPSCE3 S.pombe Sce3 gene encoding a putative RNA-... 42 0.99
6gb|AC091211.3| Drosophila melanogaster 3L BAC RP98-26E12 (Roswel... 42 0.99
7gb|AC091228.3| Drosophila melanogaster 3L BAC RP98-10L9 (Roswell... 42 0.99
8ref|NM_001021626.1| Schizosaccharomyces pombe 972h- hypothetical... 42 0.99
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.99
10dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.99
11emb|CR450686.20| Zebrafish DNA sequence from clone DKEY-182G1 in... 42 0.99
12gb|AE003561.3| Drosophila melanogaster chromosome 3L, section 24... 42 0.99
13gb|AC004352.1|AC004352 Drosophila melanogaster DNA sequence (P1 ... 42 0.99
14gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, com... 40 3.9
15gb|BC048137.1| Mus musculus HLA-B-associated transcript 3, mRNA ... 40 3.9
16gb|AF109719.2|MMHC188A7 Mus musculus casein kinase 2 beta subuni... 40 3.9
17gb|AF147806.2| Gallid herpesvirus 2, complete genome 40 3.9
18gb|AY810232.1| Schistosoma japonicum SJCHGC04183 protein mRNA, p... 40 3.9
19gb|BC037051.1| Mus musculus HLA-B-associated transcript 3, mRNA ... 40 3.9
20gb|BC026647.1| Mus musculus HLA-B-associated transcript 3, mRNA ... 40 3.9
21emb|AL590012.6| Human DNA sequence from clone RP11-40I8 on chrom... 40 3.9
22gb|AF280813.3| Homo sapiens chromosome 8 clone RP1-144M5 map 8p2... 40 3.9
23gb|AC092472.3| Homo sapiens chromosome 8 clone RP1-96P7 map map ... 40 3.9
24gb|AC090274.6| Homo sapiens chromosome 8, clone RP1-144M5, compl... 40 3.9
25gb|AY510475.1| Gallid herpesvirus 2 clone Md11BAC replication in... 40 3.9
26gb|AC067796.11| Homo sapiens chromosome 18, clone RP11-609K12, c... 40 3.9
27dbj|AK148796.1| Mus musculus 2 days neonate sympathetic ganglion... 40 3.9
28dbj|AK164266.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 40 3.9
29dbj|AK170134.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 3.9
30gb|AC158979.2| Mus musculus BAC clone RP23-218C24 from chromosom... 40 3.9
31gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 3.9
32gb|AF332861.1|AF332860S2 Mus musculus diadenosine triphosphate h... 40 3.9
33gb|AC126412.21| Mus musculus chromosome 3, clone RP24-267M22, co... 40 3.9
34gb|AF243438.1|AF243438 Gallid herpesvirus 2 serotype 1 isolate M... 40 3.9
35dbj|AK200418.1| Mus musculus cDNA, clone:Y1G0134H24, strand:plus... 40 3.9
36dbj|AK199983.1| Mus musculus cDNA, clone:Y1G0132P17, strand:minu... 40 3.9
37dbj|AK198776.1| Mus musculus cDNA, clone:Y1G0129C14, strand:minu... 40 3.9
38dbj|AK193836.1| Mus musculus cDNA, clone:Y1G0113I04, strand:minu... 40 3.9
39dbj|AK190556.1| Mus musculus cDNA, clone:Y1G0103B21, strand:plus... 40 3.9
40gb|AF118111.1|AF118111 Gallid herpesvirus 2 glycoprotein M (UL10... 40 3.9
41ref|NM_057171.1| Mus musculus HLA-B-associated transcript 3 (Bat... 40 3.9
42emb|CR974444.18| Mouse DNA sequence from clone RP23-115O3 on chr... 40 3.9
43gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 40 3.9 
>dbj|AB032839.1| Hordeum vulgare HVP1 mRNA for vacuolar proton-inorganic
            pyrophosphatase, complete cds
          Length = 2757

 Score =  577 bits (291), Expect = e-162
 Identities = 295/297 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    gtcgtcgtcatcatccatctacaggcaaaacataactcccaagacactctaatacaaacc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2665 gtcgtcgtcatcatccatctacaggcaaaacataactcccaagacactctaatacaaacc 2606

                                                                        
Query: 61   tgtcnaatggccgtccatttcgctaccctctgctaccactactacagctaccanaatgaa 120
            |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2605 tgtcaaatggccgtccatttcgctaccctctgctaccactactacagctaccagaatgaa 2546

                                                                        
Query: 121  aaactagacaagttccaacatgattgcgcaagaccaggaacaacaaaatgtaaaacacaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2545 aaactagacaagttccaacatgattgcgcaagaccaggaacaacaaaatgtaaaacacaa 2486

                                                                        
Query: 181  gagggtcatcaactgaaggagctccataacatgtggatgaagtagcgcgctcccaaccgt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2485 gagggtcatcaactgaaggagctccataacatgtggatgaagtagcgcgctcccaaccgt 2426

                                                                     
Query: 241  caaaactagacagtcgatcttcttgctctacagaatcttgaagaggattcctccata 297
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2425 caaaactagacagtcgatcttcttgctctacagaatcttgaagaggattcctccata 2369
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>gb|AY255181.1| Hordeum brevisubulatum vacuolar proton-inorganic pyrophosphatase
            (AVP1) mRNA, complete cds
          Length = 2777

 Score =  309 bits (156), Expect = 3e-81
 Identities = 259/291 (89%), Gaps = 6/291 (2%)
 Strand = Plus / Minus

                                                                        
Query: 8    tcatcatccatctacaggcaaaacataactcccaagacactctaatacaaacctgtcnaa 67
            ||||||||||||||||||||||  ||||| |||||||||||||| | |||||||||| ||
Sbjct: 2622 tcatcatccatctacaggcaaat-ataacccccaagacactctagtccaaacctgtcgaa 2564

                                                                        
Query: 68   tggccgtccatttcgctaccctctgctaccactactacagctaccanaatgaaaaactag 127
            ||||||| |||||||||||||||||| ||||||||||| ||||||| | |||||| ||||
Sbjct: 2563 tggccgttcatttcgctaccctctgccaccactactacggctaccagactgaaaa-ctag 2505

                                                                        
Query: 128  acaagttccaacatgattgcgcaagaccaggaacaacaaaatgtaaaacacaagagggtc 187
            |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 2504 acaagttccaacatgattgcgcaagaccagaaacaacgaaatgtaaaacacaagagggtc 2445

                                                                        
Query: 188  atcaactgaaggagctccataacatgtggatgaagtagcg----cgctcccaaccgtcaa 243
            |||  ||||||||||||||| |||||  ||||||||||||    |||||||||||| |||
Sbjct: 2444 atcgtctgaaggagctccatgacatgcagatgaagtagcgcgctcgctcccaaccggcaa 2385

                                                               
Query: 244  aactagacagtcgatcttcttgctctacagaatcttgaagaggattcctcc 294
            ||||||| | || ||||||| ||||||||||   ||||||||||| |||||
Sbjct: 2384 aactagataatccatcttctcgctctacagatatttgaagaggatgcctcc 2334
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>emb|CT009551.8| Pig DNA sequence from clone CH242-214G8 on chromosome 17, complete
              sequence
          Length = 239237

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 12     catccatctacaggcaaaaca 32
              |||||||||||||||||||||
Sbjct: 196439 catccatctacaggcaaaaca 196419
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>emb|AL022304.1|SPBC18H10 S.pombe chromosome II cosmid c18H10
          Length = 46213

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 86   ccctctgctaccactactaca 106
            |||||||||||||||||||||
Sbjct: 8666 ccctctgctaccactactaca 8646
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>emb|AJ000318.1|SPSCE3 S.pombe Sce3 gene encoding a putative RNA-binding protein
          Length = 2853

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 86   ccctctgctaccactactaca 106
            |||||||||||||||||||||
Sbjct: 2193 ccctctgctaccactactaca 2213
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>gb|AC091211.3| Drosophila melanogaster 3L BAC RP98-26E12 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 194589

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    gaaaaactagacaagttccaa 138
              |||||||||||||||||||||
Sbjct: 120346 gaaaaactagacaagttccaa 120366
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>gb|AC091228.3| Drosophila melanogaster 3L BAC RP98-10L9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 156142

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 118    gaaaaactagacaagttccaa 138
              |||||||||||||||||||||
Sbjct: 124039 gaaaaactagacaagttccaa 124019
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>ref|NM_001021626.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPBC18H10.04c), partial mRNA
          Length = 1167

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 86  ccctctgctaccactactaca 106
           |||||||||||||||||||||
Sbjct: 778 ccctctgctaccactactaca 798
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 91       tgctaccactactacagctac 111
                |||||||||||||||||||||
Sbjct: 23431773 tgctaccactactacagctac 23431793
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>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453G03
          Length = 144480

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    tgctaccactactacagctac 111
             |||||||||||||||||||||
Sbjct: 51670 tgctaccactactacagctac 51690
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>emb|CR450686.20| Zebrafish DNA sequence from clone DKEY-182G1 in linkage group 19,
              complete sequence
          Length = 171861

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    acaacaaaatgtaaaacacaa 180
              |||||||||||||||||||||
Sbjct: 133560 acaacaaaatgtaaaacacaa 133580
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>gb|AE003561.3| Drosophila melanogaster chromosome 3L, section 24 of 83 of the complete
             sequence
          Length = 274289

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   gaaaaactagacaagttccaa 138
             |||||||||||||||||||||
Sbjct: 47934 gaaaaactagacaagttccaa 47954
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>gb|AC004352.1|AC004352 Drosophila melanogaster DNA sequence (P1 DS02898 (D255)), complete
             sequence
          Length = 78643

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   gaaaaactagacaagttccaa 138
             |||||||||||||||||||||
Sbjct: 46946 gaaaaactagacaagttccaa 46966
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>gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, complete sequence
          Length = 200566

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     aagacactctaatacaaacc 60
              ||||||||||||||||||||
Sbjct: 170697 aagacactctaatacaaacc 170716
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>gb|BC048137.1| Mus musculus HLA-B-associated transcript 3, mRNA (cDNA clone
            IMAGE:6395739)
          Length = 1722

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  tcatcaactgaaggagctcc 205
            ||||||||||||||||||||
Sbjct: 1423 tcatcaactgaaggagctcc 1442
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>gb|AF109719.2|MMHC188A7 Mus musculus casein kinase 2 beta subunit (gMCK2) gene, partial cds;
             BAT4, NG20 (NG20), BAT3, BAT2, AIF-1, B144, lymphotoxin
             beta, TNF, and TNF beta genes, complete cds; IKBL gene,
             partial cds; and unknown gene
          Length = 120990

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   tcatcaactgaaggagctcc 205
             ||||||||||||||||||||
Sbjct: 30110 tcatcaactgaaggagctcc 30129
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>gb|AF147806.2| Gallid herpesvirus 2, complete genome
          Length = 174077

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   acaacaaaatgtaaaacaca 179
             ||||||||||||||||||||
Sbjct: 32873 acaacaaaatgtaaaacaca 32892
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>gb|AY810232.1| Schistosoma japonicum SJCHGC04183 protein mRNA, partial cds
          Length = 1033

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 161 caacaaaatgtaaaacacaa 180
           ||||||||||||||||||||
Sbjct: 398 caacaaaatgtaaaacacaa 417
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>gb|BC037051.1| Mus musculus HLA-B-associated transcript 3, mRNA (cDNA clone
            IMAGE:4945855), partial cds
          Length = 1697

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  tcatcaactgaaggagctcc 205
            ||||||||||||||||||||
Sbjct: 1398 tcatcaactgaaggagctcc 1417
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>gb|BC026647.1| Mus musculus HLA-B-associated transcript 3, mRNA (cDNA clone
           IMAGE:4987605), partial cds
          Length = 2630

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tcatcaactgaaggagctcc 205
           ||||||||||||||||||||
Sbjct: 318 tcatcaactgaaggagctcc 337
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>emb|AL590012.6| Human DNA sequence from clone RP11-40I8 on chromosome X, complete
            sequence
          Length = 106773

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  aggaacaacaaaatgtaaaa 175
            ||||||||||||||||||||
Sbjct: 5616 aggaacaacaaaatgtaaaa 5597
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>gb|AF280813.3| Homo sapiens chromosome 8 clone RP1-144M5 map 8p21-p11, complete
             sequence
          Length = 176902

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   aggaacaacaaaatgtaaaa 175
             ||||||||||||||||||||
Sbjct: 76832 aggaacaacaaaatgtaaaa 76851
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>gb|AC092472.3| Homo sapiens chromosome 8 clone RP1-96P7 map map 8p21-p11, complete
             sequence
          Length = 167794

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   aggaacaacaaaatgtaaaa 175
             ||||||||||||||||||||
Sbjct: 33327 aggaacaacaaaatgtaaaa 33346
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>gb|AC090274.6| Homo sapiens chromosome 8, clone RP1-144M5, complete sequence
          Length = 176889

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   aggaacaacaaaatgtaaaa 175
             ||||||||||||||||||||
Sbjct: 76820 aggaacaacaaaatgtaaaa 76839
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>gb|AY510475.1| Gallid herpesvirus 2 clone Md11BAC replication intermediate, complete
             genome
          Length = 170950

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   acaacaaaatgtaaaacaca 179
             ||||||||||||||||||||
Sbjct: 44951 acaacaaaatgtaaaacaca 44970
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>gb|AC067796.11| Homo sapiens chromosome 18, clone RP11-609K12, complete sequence
          Length = 201861

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     ctaccctctgctaccactac 102
              ||||||||||||||||||||
Sbjct: 135976 ctaccctctgctaccactac 135995
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>dbj|AK148796.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
            full-length enriched library, clone:7120447D04
            product:HLA-B-associated transcript 3, full insert
            sequence
          Length = 3707

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  tcatcaactgaaggagctcc 205
            ||||||||||||||||||||
Sbjct: 1440 tcatcaactgaaggagctcc 1459
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>dbj|AK164266.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030051D22
            product:HLA-B-associated transcript 3, full insert
            sequence
          Length = 3539

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  tcatcaactgaaggagctcc 205
            ||||||||||||||||||||
Sbjct: 1297 tcatcaactgaaggagctcc 1316
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>dbj|AK170134.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630021C15
            product:HLA-B-associated transcript 3, full insert
            sequence
          Length = 3450

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  tcatcaactgaaggagctcc 205
            ||||||||||||||||||||
Sbjct: 1394 tcatcaactgaaggagctcc 1413
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>gb|AC158979.2| Mus musculus BAC clone RP23-218C24 from chromosome 14, complete
             sequence
          Length = 216848

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   caacaaaatgtaaaacacaa 180
             ||||||||||||||||||||
Sbjct: 69115 caacaaaatgtaaaacacaa 69096
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     cagaatcttgaagaggattc 290
               ||||||||||||||||||||
Sbjct: 2039279 cagaatcttgaagaggattc 2039260
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>gb|AF332861.1|AF332860S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, intron 5,
             partial sequence
          Length = 89994

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   caacaaaatgtaaaacacaa 180
             ||||||||||||||||||||
Sbjct: 58160 caacaaaatgtaaaacacaa 58141
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>gb|AC126412.21| Mus musculus chromosome 3, clone RP24-267M22, complete sequence
          Length = 177266

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     aagacactctaatacaaacc 60
              ||||||||||||||||||||
Sbjct: 156947 aagacactctaatacaaacc 156928
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>gb|AF243438.1|AF243438 Gallid herpesvirus 2 serotype 1 isolate Md5, complete genome
          Length = 177874

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   acaacaaaatgtaaaacaca 179
             ||||||||||||||||||||
Sbjct: 34319 acaacaaaatgtaaaacaca 34338
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>dbj|AK200418.1| Mus musculus cDNA, clone:Y1G0134H24, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000070358, based on BLAT search
          Length = 104

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tcatcaactgaaggagctcc 205
           ||||||||||||||||||||
Sbjct: 66  tcatcaactgaaggagctcc 85
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>dbj|AK199983.1| Mus musculus cDNA, clone:Y1G0132P17, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000070358, based on BLAT search
          Length = 104

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tcatcaactgaaggagctcc 205
           ||||||||||||||||||||
Sbjct: 66  tcatcaactgaaggagctcc 85
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>dbj|AK198776.1| Mus musculus cDNA, clone:Y1G0129C14, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000070358, based on BLAT search
          Length = 233

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tcatcaactgaaggagctcc 205
           ||||||||||||||||||||
Sbjct: 195 tcatcaactgaaggagctcc 214
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>dbj|AK193836.1| Mus musculus cDNA, clone:Y1G0113I04, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000070358, based on BLAT search
          Length = 104

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tcatcaactgaaggagctcc 205
           ||||||||||||||||||||
Sbjct: 66  tcatcaactgaaggagctcc 85
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>dbj|AK190556.1| Mus musculus cDNA, clone:Y1G0103B21, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000070358, based on BLAT search
          Length = 104

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tcatcaactgaaggagctcc 205
           ||||||||||||||||||||
Sbjct: 66  tcatcaactgaaggagctcc 85
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>gb|AF118111.1|AF118111 Gallid herpesvirus 2 glycoprotein M (UL10) and egress protein homolog
            (UL11) genes, complete cds; and deoxyribonuclease homolog
            (UL12) gene, partial cds
          Length = 2497

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 160  acaacaaaatgtaaaacaca 179
            ||||||||||||||||||||
Sbjct: 1145 acaacaaaatgtaaaacaca 1164
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>ref|NM_057171.1| Mus musculus HLA-B-associated transcript 3 (Bat3), mRNA
          Length = 3708

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  tcatcaactgaaggagctcc 205
            ||||||||||||||||||||
Sbjct: 1510 tcatcaactgaaggagctcc 1529
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>emb|CR974444.18| Mouse DNA sequence from clone RP23-115O3 on chromosome 17, complete
             sequence
          Length = 190041

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   tcatcaactgaaggagctcc 205
             ||||||||||||||||||||
Sbjct: 77954 tcatcaactgaaggagctcc 77973
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 271     cagaatcttgaagaggattc 290
               ||||||||||||||||||||
Sbjct: 2243728 cagaatcttgaagaggattc 2243747


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,537,201
Number of Sequences: 3902068
Number of extensions: 2537201
Number of successful extensions: 51530
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51450
Number of HSP's gapped (non-prelim): 77
length of query: 297
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 275
effective length of database: 17,147,199,772
effective search space: 4715479937300
effective search space used: 4715479937300
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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