ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13o12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 467 aacatatttccagctatatgttccacacctggaataga 504 |||||||||||||||||||||| |||||| |||||||| Sbjct: 797 aacatatttccagctatatgtttcacacccggaataga 760
>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full insert sequence Length = 1308 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 467 aacatatttccagctatatgttccacacctggaataga 504 |||||||||||||||||||||| |||||| |||||||| Sbjct: 823 aacatatttccagctatatgtttcacacccggaataga 786
>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full insert sequence Length = 1365 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 467 aacatatttccagctatatgttccacacctggaataga 504 |||||||||||||||||||||| |||||| |||||||| Sbjct: 810 aacatatttccagctatatgtttcacacccggaataga 773
>gb|AC145219.16| Medicago truncatula clone mth2-6m1, complete sequence Length = 140462 Score = 54.0 bits (27), Expect = 5e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagtacaag 39 |||||||||||||| ||||||||||||||| Sbjct: 2606 acttatatttaggatcggagggagtacaag 2577
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 467 aacatatttccagctatatgttccacacctg 497 |||||||||||||||||||||| |||||||| Sbjct: 107620 aacatatttccagctatatgtttcacacctg 107590 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 467 aacatatttccagctatatgttccacacctg 497 |||||||||||||||| ||||| |||||||| Sbjct: 131318 aacatatttccagctacatgtttcacacctg 131348
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 467 aacatatttccagctatatgttccacacctg 497 |||||||||||||||||||||| |||||||| Sbjct: 5131347 aacatatttccagctatatgtttcacacctg 5131317 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 467 aacatatttccagctatatgttccacacctg 497 |||||||||||||||| ||||| |||||||| Sbjct: 5155045 aacatatttccagctacatgtttcacacctg 5155075 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtacaa 38 |||||||||| |||||||||||||| Sbjct: 23412323 atatttaggaacggagggagtacaa 23412299 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 aacatatttccagctatatgtt 488 |||||||||||||||||||||| Sbjct: 308439 aacatatttccagctatatgtt 308418
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 468 acatatttccagctatatgttccacacctggaata 502 ||||||||||||||||||||||||| |||| |||| Sbjct: 5374151 acatatttccagctatatgttccacgcctgtaata 5374117 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 468 acatatttccagctatatgttccacacctggaata 502 |||||| |||||||||||||||||| |||| |||| Sbjct: 5172559 acatatctccagctatatgttccacgcctgtaata 5172525 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 atatttaggancggagggagtac 36 |||||||||| |||||||||||| Sbjct: 22083692 atatttaggaacggagggagtac 22083714
>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 105645 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 468 acatatttccagctatatgttccacacctggaata 502 ||||||||||||||||||||||||| |||| |||| Sbjct: 46218 acatatttccagctatatgttccacgcctgtaata 46184
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 468 acatatttccagctatatgttccacacctggaata 502 ||||||||||||||||||||||||| |||| |||| Sbjct: 5374140 acatatttccagctatatgttccacgcctgtaata 5374106 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 468 acatatttccagctatatgttccacacctggaata 502 |||||| |||||||||||||||||| |||| |||| Sbjct: 5172541 acatatctccagctatatgttccacgcctgtaata 5172507 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 atatttaggancggagggagtac 36 |||||||||| |||||||||||| Sbjct: 22012037 atatttaggaacggagggagtac 22012059
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141841 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 468 acatatttccagctatatgttccacacctggaata 502 ||||||||||||||||||||||||| |||| |||| Sbjct: 91657 acatatttccagctatatgttccacgcctgtaata 91691
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 52.0 bits (26), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtacaa 38 |||||||||||||| |||||||||||||| Sbjct: 3635 acttatatttaggaacggagggagtacaa 3663
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 50.1 bits (25), Expect = 0.008 Identities = 27/28 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagtaca 37 |||||||||||||| ||||||||||||| Sbjct: 76837 acttatatttaggaacggagggagtaca 76810 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 76950 acttatatttaggaacggagggagta 76975
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 50.1 bits (25), Expect = 0.008 Identities = 27/28 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtacaa 38 ||||||||||||| |||||||||||||| Sbjct: 1056 cttatatttaggaacggagggagtacaa 1029
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 50.1 bits (25), Expect = 0.008 Identities = 27/28 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtaca 37 |||||||||||||| ||||||||||||| Sbjct: 8698 acttatatttaggaacggagggagtaca 8725 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 8592 acttatatttaggaacggagggagta 8567
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 50.1 bits (25), Expect = 0.008 Identities = 27/28 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtacaa 38 ||||||||||||| |||||||||||||| Sbjct: 528 cttatatttaggaacggagggagtacaa 555
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 50.1 bits (25), Expect = 0.008 Identities = 27/28 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtaca 37 |||||||||||||| ||||||||||||| Sbjct: 391 acttatatttaggaacggagggagtaca 418
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 50.1 bits (25), Expect = 0.008 Identities = 27/28 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtacaa 38 ||||||||||||| |||||||||||||| Sbjct: 227 cttatatttaggaacggagggagtacaa 254
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 50.1 bits (25), Expect = 0.008 Identities = 27/28 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtacaa 38 ||||||||||||| |||||||||||||| Sbjct: 40534 cttatatttaggaacggagggagtacaa 40507 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 40795 cttatatttaggaacggagggagta 40819
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 48.1 bits (24), Expect = 0.032 Identities = 26/27 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| |||||||||||| Sbjct: 93754 acttatatttaggaacggagggagtac 93728 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 67923 acttatatttaggaacggagggagta 67948 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 55696 acttatatttaggaacggagggagta 55721
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 48.1 bits (24), Expect = 0.032 Identities = 26/27 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| |||||||||||| Sbjct: 90869 acttatatttaggaacggagggagtac 90895 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 73891 acttatatttaggaacggagggagta 73866 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 71829 acttatatttaggaacggagggagta 71854 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| ||||||| |||| Sbjct: 71716 acttatatttaggaacggagggggtac 71690
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 48.1 bits (24), Expect = 0.032 Identities = 26/27 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| |||||||||||| Sbjct: 415 acttatatttaggaacggagggagtac 441
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 48.1 bits (24), Expect = 0.032 Identities = 26/27 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| |||||||||||| Sbjct: 89281 acttatatttaggaacggagggagtac 89307 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 89168 acttatatttaggaacggagggagta 89143 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 81161 acttatatttaggaacggagggagta 81136 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 14515 acttatatttaggaacggagggagta 14490 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 66743 cttatatttaggaacggagggagta 66767 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 66630 cttatatttaggaacggagggagta 66606 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| ||||| |||||| Sbjct: 83490 acttatatttaggaacggagagagtac 83464 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| |||||| ||||| Sbjct: 14628 acttatatttaggaacggaggaagtac 14654
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 48.1 bits (24), Expect = 0.032 Identities = 26/27 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| |||||||||||| Sbjct: 8390 acttatatttaggaacggagggagtac 8364 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 322 cttatatttaggaacggagggagta 346
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.032 Identities = 29/31 (93%) Strand = Plus / Minus Query: 9 cacttatatttaggancggagggagtacaag 39 ||||||||||| ||| ||||||||||||||| Sbjct: 8202482 cacttatattttggaacggagggagtacaag 8202452 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 10956557 cttatatttaggaacggagggagta 10956533 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||| ||| ||||||||||||| Sbjct: 15656223 cttatattttggaacggagggagtaca 15656249 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtac 36 |||||||||| |||||||||||| Sbjct: 7535109 atatttaggaacggagggagtac 7535087
>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_F06 Length = 130968 Score = 48.1 bits (24), Expect = 0.032 Identities = 29/31 (93%) Strand = Plus / Minus Query: 9 cacttatatttaggancggagggagtacaag 39 ||||||||||| ||| ||||||||||||||| Sbjct: 34628 cacttatattttggaacggagggagtacaag 34598
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 48.1 bits (24), Expect = 0.032 Identities = 26/27 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| |||||||||||| Sbjct: 2155 acttatatttaggaacggagggagtac 2181
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 1241 acttatatttaggaacggagggagta 1216 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| | |||||||||| Sbjct: 1352 acttatatttaggaacagagggagtac 1378
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 1247 acttatatttaggaacggagggagta 1222
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 148699 acttatatttaggaacggagggagta 148724
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 12694 acttatatttaggaacggagggagta 12669
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 57369 acttatatttaggaacggagggagta 57344 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 52449 acttatatttaggaacggagggagta 52474
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 1798 acttatatttaggaacggagggagta 1823
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 842 acttatatttaggaacggagggagta 817
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 23299 acttatatttaggaacggagggagta 23274
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 136709 acttatatttaggaacggagggagta 136684 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 284 acttatatttaggaacggagggagta 309 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 1730 cttatatttaggaacggagggagta 1754 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| ||||| |||||| Sbjct: 143317 acttatatttaggaacggagcgagtac 143343
>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete sequence Length = 149978 Score = 46.1 bits (23), Expect = 0.13 Identities = 28/30 (93%) Strand = Plus / Minus Query: 9 cacttatatttaggancggagggagtacaa 38 |||||||||||||| |||||||||||||| Sbjct: 128440 cacttatatttagggacggagggagtacaa 128411
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 2330 acttatatttaggaacggagggagta 2355
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 51907 acttatatttaggaacggagggagta 51932 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 23137 acttatatttaggaacggagggagta 23112
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 5258 acttatatttaggaacggagggagta 5233 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 5181 acttatatttaggaacggagggagta 5156
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.13 Identities = 28/30 (93%) Strand = Plus / Minus Query: 9 cacttatatttaggancggagggagtacaa 38 |||||||||||||| |||||||||||||| Sbjct: 16510341 cacttatatttagggacggagggagtacaa 16510312 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtacaa 38 |||||||||| |||||||||||||| Sbjct: 13668717 atatttaggaacggagggagtacaa 13668693 Score = 42.1 bits (21), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtacaaggta 42 ||||||||| || |||||||||||||||||| Sbjct: 10066344 cttatattttgggacggagggagtacaaggta 10066313 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagtac 36 |||||||||| ||| |||||||||||| Sbjct: 12549073 acttatattttggagcggagggagtac 12549047 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 9 cacttatatttaggancggagggagta 35 ||||||||||| ||| ||||||||||| Sbjct: 2849038 cacttatattttggaacggagggagta 2849064
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtac 36 ||||||||||||| |||||||||||| Sbjct: 20360095 cttatatttaggaacggagggagtac 20360120
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 21995 acttatatttaggatcggagggagta 22020 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 5390 cttatatttaggaacggagggagta 5366
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 47305 acttatatttaggaacggagggagta 47280 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 61146 cttatatttaggaacggagggagta 61170 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ttatatttaggancggagggagta 35 |||||||||||| ||||||||||| Sbjct: 60961 ttatatttaggaacggagggagta 60938 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtac 36 ||||||||||| || |||||||||||| Sbjct: 47418 acttatatttacgaacggagggagtac 47444
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 91819 acttatatttaggaacggagggagta 91844
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtac 36 ||||||||||||| |||||||||||| Sbjct: 107843 cttatatttaggaacggagggagtac 107868
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 2921 acttatatttaggaacggagggagta 2946 Score = 44.1 bits (22), Expect = 0.50 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagtacaa 38 |||||||||||||| ||||||||||||| Sbjct: 2810 acttatatttaggaatggagggagtacaa 2782
>emb|AJ459252.1|TAE459252 Triticum aestivum TAA1b gene for fatty acyl coA reductase Length = 4308 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 1109 acttatatttaggaacggagggagta 1134
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.13 Identities = 28/30 (93%) Strand = Plus / Minus Query: 9 cacttatatttaggancggagggagtacaa 38 |||||||||||||| |||||||||||||| Sbjct: 16518582 cacttatatttagggacggagggagtacaa 16518553 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtacaa 38 |||||||||| |||||||||||||| Sbjct: 13676059 atatttaggaacggagggagtacaa 13676035 Score = 42.1 bits (21), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtacaaggta 42 ||||||||| || |||||||||||||||||| Sbjct: 10072383 cttatattttgggacggagggagtacaaggta 10072352 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagtac 36 |||||||||| ||| |||||||||||| Sbjct: 12556413 acttatattttggagcggagggagtac 12556387 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 9 cacttatatttaggancggagggagta 35 ||||||||||| ||| ||||||||||| Sbjct: 2848989 cacttatattttggaacggagggagta 2849015
>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124959 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 468 acatatttccagctatatgttccacacctggaata 502 |||||| |||||||||||||||||| |||| |||| Sbjct: 91040 acatatctccagctatatgttccacgcctgtaata 91074
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001, complete sequence Length = 103397 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtac 36 ||||||||||||| |||||||||||| Sbjct: 30603 cttatatttaggaacggagggagtac 30578
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagta 35 |||||||||||||| ||||||||||| Sbjct: 7539 acttatatttaggaacggagggagta 7564 Score = 44.1 bits (22), Expect = 0.50 Identities = 30/33 (90%) Strand = Plus / Minus Query: 5 aaagcacttatatttaggancggagggagtaca 37 |||| |||| ||||||||| ||||||||||||| Sbjct: 7432 aaaggacttgtatttaggaacggagggagtaca 7400
>ref|XM_474642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 870 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 aacatatttccagctatatgttccacacctggaa 500 |||||||||||||||| ||||| |||||| |||| Sbjct: 533 aacatatttccagctacatgtttcacacccggaa 500
>ref|XM_470970.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1065 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 aacatatttccagctatatgtt 488 |||||||||||||||||||||| Sbjct: 728 aacatatttccagctatatgtt 707
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 44.1 bits (22), Expect = 0.50 Identities = 30/33 (90%) Strand = Plus / Minus Query: 12 ttatatttaggancggagggagtacaaggtata 44 ||||||||||| |||||||||||| ||||||| Sbjct: 75994 ttatatttagggacggagggagtactaggtata 75962
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 26827 cttatatttaggaacggagggagta 26803
>gb|AC174291.12| Medicago truncatula clone mth2-58k14, complete sequence Length = 117627 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 75378 cttatatttaggaccggagggagta 75402
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE Length = 114811 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 99817 cttatatttaggaacggagggagta 99793
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 54079 cttatatttaggaacggagggagta 54103
>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence Length = 130178 Score = 44.1 bits (22), Expect = 0.50 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 ttatatttaggancggagggagtacaagg 40 |||||||||| | |||||||||||||||| Sbjct: 93065 ttatatttagaaacggagggagtacaagg 93093
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtacaa 38 |||||||||| |||||||||||||| Sbjct: 129644 atatttaggaacggagggagtacaa 129620
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15, complete sequence Length = 144778 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 aacatatttccagctatatgtt 488 |||||||||||||||||||||| Sbjct: 104259 aacatatttccagctatatgtt 104238
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 10411 cttatatttaggaacggagggagta 10387
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 727 cttatatttaggaacggagggagta 703
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 44.1 bits (22), Expect = 0.50 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtacaa 38 |||| ||||||||| |||||||||||||| Sbjct: 3695 acttgtatttaggaacggagggagtacaa 3723
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 44.1 bits (22), Expect = 0.50 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtacaa 38 |||||||||| ||| |||||||||||||| Sbjct: 30412 acttatatttcggaacggagggagtacaa 30440
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 23958338 cttatatttaggaacggagggagta 23958314 Score = 44.1 bits (22), Expect = 0.50 Identities = 30/33 (90%) Strand = Plus / Minus Query: 12 ttatatttaggancggagggagtacaaggtata 44 ||||||||||| |||||||||||| ||||||| Sbjct: 1623834 ttatatttagggacggagggagtactaggtata 1623802 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||| ||| ||||||||||||| Sbjct: 5505361 cttatattttggaacggagggagtaca 5505335 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||| ||| ||||||||||||| Sbjct: 5461850 cttatattttggaacggagggagtaca 5461876
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 5778 cttatatttaggaacggagggagta 5802
>gb|AC027661.1| Oryza sativa (japonica cultivar-group) BAC nbxb0049A03 chromosome 10, complete sequence Length = 162101 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtacaa 38 |||||||||| |||||||||||||| Sbjct: 137719 atatttaggaacggagggagtacaa 137695
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 162756 cttatatttaggaacggagggagta 162732
>dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K22, full insert sequence Length = 1233 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 aacatatttccagctatatgtt 488 |||||||||||||||||||||| Sbjct: 738 aacatatttccagctatatgtt 717
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 178116 cttatatttaggaacggagggagta 178140
>emb|CR962130.2| Medicago truncatula chromosome 5 clone mte1-63h20, COMPLETE SEQUENCE Length = 115239 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 7514 cttatatttaggaccggagggagta 7490
>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399, complete sequence Length = 94919 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 78635 cttatatttaggaacggagggagta 78659
>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382, complete sequence Length = 99748 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 4761 cttatatttaggaacggagggagta 4785 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 4501 cttatatttaggaacggagggagta 4477
>dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301a, complete sequence Length = 28124 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 27398 cttatatttaggaacggagggagta 27422
>dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09G09, TM0234, complete sequence Length = 105887 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 26347 cttatatttaggaacggagggagta 26323
>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b, complete sequence Length = 93398 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 25848 cttatatttaggaacggagggagta 25824
>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254, complete sequence Length = 118592 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 68727 cttatatttaggaacggagggagta 68703 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 57057 cttatatttaggaacggagggagta 57033
>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b, complete sequence Length = 66866 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 3275 cttatatttaggaacggagggagta 3299
>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139, complete sequence Length = 106089 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 12742 cttatatttaggaacggagggagta 12766
>dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48I11, TM0106, complete sequence Length = 103636 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 23872 cttatatttaggaacggagggagta 23896 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 23611 cttatatttaggaacggagggagta 23587
>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b, complete sequence Length = 69411 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 44092 cttatatttaggaacggagggagta 44068
>dbj|AP004543.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102b, complete sequence Length = 38490 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 37283 cttatatttaggaacggagggagta 37259
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 69548 cttatatttaggaacggagggagta 69524
>dbj|AP004506.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036a, complete sequence Length = 62624 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 12139 cttatatttaggaacggagggagta 12163
>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021, complete sequence Length = 83700 Score = 44.1 bits (22), Expect = 0.50 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagta 35 ||||||||||||| ||||||||||| Sbjct: 44827 cttatatttaggaacggagggagta 44851 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ttatatttaggancggagggagta 35 |||||||||||| ||||||||||| Sbjct: 44570 ttatatttaggaacggagggagta 44547
>ref|XM_527527.1| PREDICTED: Pan troglodytes similar to hypothetical protein 9130014G24 (LOC472148), mRNA Length = 2775 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 agaaactcctcctcagttctc 238 ||||||||||||||||||||| Sbjct: 2487 agaaactcctcctcagttctc 2507
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtaca 37 |||||||||| ||||||||||||| Sbjct: 69974 atatttaggaacggagggagtaca 69951
>ref|XM_655554.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3042.2), mRNA Length = 909 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 ctcctcagttctctcctttcc 246 ||||||||||||||||||||| Sbjct: 59 ctcctcagttctctcctttcc 79
>gb|AC090031.2| Bos taurus clone RP42-341K3, complete sequence Length = 213841 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tcctcagttctctcctttcct 247 ||||||||||||||||||||| Sbjct: 190460 tcctcagttctctcctttcct 190480
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtaca 37 |||||||||| ||||||||||||| Sbjct: 44346 atatttaggaacggagggagtaca 44323
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tcctcagttctctcctttcct 247 ||||||||||||||||||||| Sbjct: 1057834 tcctcagttctctcctttcct 1057854
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 42.1 bits (21), Expect = 2.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagtaca 37 |||||||||||||| | ||||||||||| Sbjct: 49937 acttatatttaggaacagagggagtaca 49910
>emb|X68288.1|TAECPRO T.aestivum gene for EC protein Length = 3065 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 atatttaggancggagggagtaca 37 |||||||||| ||||||||||||| Sbjct: 1849 atatttaggaacggagggagtaca 1872
>gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete sequence Length = 115348 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ttatatttaggancggagggagta 35 |||||||||||| ||||||||||| Sbjct: 69257 ttatatttaggatcggagggagta 69280
>gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete sequence Length = 139792 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ttatatttaggancggagggagta 35 |||||||||||| ||||||||||| Sbjct: 15835 ttatatttaggatcggagggagta 15812
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ttatatttaggancggagggagta 35 |||||||||||| ||||||||||| Sbjct: 16846 ttatatttaggaacggagggagta 16869
>emb|CR931736.1| Medicago truncatula chromosome 5 clone mte1-84f20, COMPLETE SEQUENCE Length = 149149 Score = 42.1 bits (21), Expect = 2.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtacaaggtataaa 46 ||||||||| || ||||||||||||| |||||||| Sbjct: 101367 cttatatttcgggacggagggagtacatggtataaa 101332
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 42.1 bits (21), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtacaaggta 42 ||||||||| || |||||||||||||||||| Sbjct: 83103 cttatattttgggacggagggagtacaaggta 83072
>dbj|AP004253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_C07 Length = 108208 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagt 34 ||||||||||||| |||||||||| Sbjct: 45762 cttatatttaggaacggagggagt 45785
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggag 33 |||||||||||||| ||||||||| Sbjct: 1352 acttatatttaggaacggagggag 1375
>gb|AC159881.2| Mus musculus BAC clone RP24-493B12 from chromosome 9, complete sequence Length = 126762 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 tcatgcttactactttgtaaa 141 ||||||||||||||||||||| Sbjct: 19413 tcatgcttactactttgtaaa 19393
>gb|AC010590.7|AC010590 Homo sapiens chromosome 5 clone CTC-441F14, complete sequence Length = 92602 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 tctgaaagcacttatatttag 21 ||||||||||||||||||||| Sbjct: 41740 tctgaaagcacttatatttag 41760
>gb|AF363630.1|AF363630 Coffea arabica alpha tubulin gene, exons 1 and 2, and partial cds Length = 1671 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tgtaggttgactggaaagttc 188 ||||||||||||||||||||| Sbjct: 118 tgtaggttgactggaaagttc 98
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtaca 37 |||||||||| ||||||||||||| Sbjct: 18941148 atatttaggaacggagggagtaca 18941125 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||| ||| ||||||||||||| Sbjct: 24733929 cttatattttggaacggagggagtaca 24733955 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtaca 37 |||||||||||| ||||||||||||| Sbjct: 7459049 cttatatttagggacggagggagtaca 7459023
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagt 34 ||||||||||||| |||||||||| Sbjct: 42091219 cttatatttaggaacggagggagt 42091242 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ttatatttaggancggagggagta 35 |||||||||||| ||||||||||| Sbjct: 21121709 ttatatttaggaacggagggagta 21121686 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagt 34 ||||||||||||| |||||||||| Sbjct: 11591966 cttatatttaggaacggagggagt 11591989 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 9 cacttatatttaggancggagggagta 35 ||||||||||||||| ||||| ||||| Sbjct: 36283469 cacttatatttaggaacggagtgagta 36283443 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 12 ttatatttaggancggagggagtacaa 38 |||||||| ||| |||||||||||||| Sbjct: 20711726 ttatattttggaacggagggagtacaa 20711700
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagt 34 ||||||||||||| |||||||||| Sbjct: 78024 cttatatttaggaacggagggagt 78047
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ttatatttaggancggagggagta 35 |||||||||||| ||||||||||| Sbjct: 89254 ttatatttaggaacggagggagta 89231
>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0008D05 Length = 134776 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagt 34 ||||||||||||| |||||||||| Sbjct: 98973 cttatatttaggaacggagggagt 98996
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ttatatttaggancggagggagta 35 |||||||||||| ||||||||||| Sbjct: 19218 ttatatttaggaacggagggagta 19195
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagt 34 ||||||||||||| |||||||||| Sbjct: 56802 cttatatttaggaacggagggagt 56779
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagt 34 ||||||||||||| |||||||||| Sbjct: 31090 cttatatttaggaacggagggagt 31113
>emb|AJ512944.1|HVU512944 Hordeum vulgare cor14b gene for cold regulated protein Length = 1395 Score = 42.1 bits (21), Expect = 2.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtacaa 38 ||||||||||| | |||||||||||||| Sbjct: 1393 cttatatttagaaacggagggagtacaa 1366
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtaca 37 |||||||||| ||||||||||||| Sbjct: 2261 atatttaggaacggagggagtaca 2238
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtaca 37 |||||||||| ||||||||||||| Sbjct: 19099797 atatttaggaacggagggagtaca 19099774 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||| ||| ||||||||||||| Sbjct: 25045599 cttatattttggaacggagggagtaca 25045625 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtaca 37 |||||||||||| ||||||||||||| Sbjct: 7529135 cttatatttagggacggagggagtaca 7529109
>gb|M60732.1|BLYCLDAA Hordeum vulgare cold-regulated mRNA, 3' end Length = 653 Score = 42.1 bits (21), Expect = 2.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtacaa 38 ||||||||||| | |||||||||||||| Sbjct: 627 cttatatttagaaacggagggagtacaa 600
>emb|CT009732.8| Mouse DNA sequence from clone RP23-72O20 on chromosome 9, complete sequence Length = 239257 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 tcatgcttactactttgtaaa 141 ||||||||||||||||||||| Sbjct: 229647 tcatgcttactactttgtaaa 229627
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 42.1 bits (21), Expect = 2.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtaca 37 |||||||| ||||| ||||||||||||| Sbjct: 83937 acttatatataggaacggagggagtaca 83964
>gb|DQ223971.1| Triticum aestivum flavonoid O-methyltransferase mRNA, complete cds Length = 1233 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ggaaggtcaaagttgatgcc 546 |||||||||||||||||||| Sbjct: 751 ggaaggtcaaagttgatgcc 732
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 tatttaggancggagggagtaca 37 ||||||||| ||||||||||||| Sbjct: 50409 tatttaggaacggagggagtaca 50387
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||| ||| ||||||||||||| Sbjct: 148524 cttatattttggaacggagggagtaca 148550
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cggagggagtacaaggtata 44 |||||||||||||||||||| Sbjct: 113374 cggagggagtacaaggtata 113355
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtaca 37 |||||||||||| ||||||||||||| Sbjct: 11749 cttatatttagggacggagggagtaca 11775
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||| ||| ||||||||||||| Sbjct: 38570 cttatattttggaacggagggagtaca 38544
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cggagggagtacaaggtata 44 |||||||||||||||||||| Sbjct: 31357 cggagggagtacaaggtata 31338
>ref|XM_957806.1| Neurospora crassa OR74A hypothetical protein (NCU05713.1) partial mRNA Length = 933 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gagagcccaaaagttcccga 164 |||||||||||||||||||| Sbjct: 754 gagagcccaaaagttcccga 773
>ref|XM_325567.1| Neurospora crassa OR74A hypothetical protein (NCU05713.1) partial mRNA Length = 933 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gagagcccaaaagttcccga 164 |||||||||||||||||||| Sbjct: 754 gagagcccaaaagttcccga 773
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 catacattaccaatagttat 102 |||||||||||||||||||| Sbjct: 376209 catacattaccaatagttat 376190
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cggagggagtacaaggtata 44 |||||||||||||||||||| Sbjct: 28848062 cggagggagtacaaggtata 28848043
>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0090F16, complete sequence Length = 147341 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||| ||| ||||||||||||| Sbjct: 88559 cttatattttggaacggagggagtaca 88533
>gb|AC102031.7| Mus musculus chromosome 3, clone RP23-14C8, complete sequence Length = 181179 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 cagttctctcctttcctccc 250 |||||||||||||||||||| Sbjct: 13751 cagttctctcctttcctccc 13770
>gb|AC136503.46| Medicago truncatula clone mth2-15n1, complete sequence Length = 117475 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||| | |||||||||||| Sbjct: 71567 acttatatttagaaacggagggagtac 71593
>gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete sequence Length = 110895 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggag 33 ||||||||||||| ||||||||| Sbjct: 23742 cttatatttaggaccggagggag 23764
>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence Length = 124554 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 13 tatatttaggancggagggagta 35 ||||||||||| ||||||||||| Sbjct: 65328 tatatttaggatcggagggagta 65306
>gb|AC137078.24| Medicago truncatula clone mth2-10e12, complete sequence Length = 144306 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtaca 37 |||||||| |||| ||||||||||||| Sbjct: 134890 cttatattaaggaccggagggagtaca 134864
>emb|AL391684.6| Human DNA sequence from clone RP11-441O15 on chromosome 10 Contains the CNNM1 gene for cyclin M1, the GOT1 gene for glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1), a novel gene and two CpG islands, complete sequence Length = 172792 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 cctcagttctctcctttcctccct 251 |||||||||||||||| ||||||| Sbjct: 121666 cctcagttctctccttccctccct 121689
>emb|AL355595.10| Human DNA sequence from clone RP11-276G3 on chromosome 13 Contains a novel gene and a novel pseudogene, complete sequence Length = 119343 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 tcaaagttgatgcctctgat 552 |||||||||||||||||||| Sbjct: 4628 tcaaagttgatgcctctgat 4609
>gb|BT009538.1| Triticum aestivum clone wr1.pk0144.b10:fis, full insert mRNA sequence Length = 2748 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 12 ttatatttaggancggagggagt 34 |||||||||||| |||||||||| Sbjct: 2403 ttatatttaggaacggagggagt 2425
>emb|CR932963.2| Medicago truncatula chromosome 5 clone mth2-115p22, COMPLETE SEQUENCE Length = 133910 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||||||| |||||||||||| Sbjct: 88451 cttatatttaggacaggagggagtaca 88425
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 10 acttatatttaggancggagggagtac 36 |||||||||| ||| |||||||||||| Sbjct: 69160 acttatattttggagcggagggagtac 69134
>gb|AC008457.6| Homo sapiens chromosome 5 clone CTC-349J22, complete sequence Length = 59693 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 tttttagaagcctgatgcag 400 |||||||||||||||||||| Sbjct: 24045 tttttagaagcctgatgcag 24064
>dbj|AK142043.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230011M02 product:unclassifiable, full insert sequence Length = 2399 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 aatgaagagattttgtgctg 299 |||||||||||||||||||| Sbjct: 1874 aatgaagagattttgtgctg 1855
>gb|AC073607.19| Homo sapiens 12 BAC RP11-462G20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165085 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gttctctcctttcctccctc 252 |||||||||||||||||||| Sbjct: 126548 gttctctcctttcctccctc 126567
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 9 cacttatatttaggancggagggagta 35 ||||||||||| ||| ||||||||||| Sbjct: 30070 cacttatattttggaacggagggagta 30096
>gb|AC148995.2| Medicago truncatula chromosome 7 BAC clone mth2-49l23, complete sequence Length = 128239 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggag 33 ||||||||||||| ||||||||| Sbjct: 126104 cttatatttaggaccggagggag 126126
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 atatttaggancggagggagtac 36 |||||||||| |||||||||||| Sbjct: 509 atatttaggaacggagggagtac 531
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtaca 37 |||||||||| || ||||||||||||| Sbjct: 3720293 cttatatttaagaacggagggagtaca 3720319 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 atatttaggancggagggagtac 36 |||||||||| |||||||||||| Sbjct: 1470542 atatttaggaacggagggagtac 1470564
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cggagggagtacaaggtata 44 |||||||||||||||||||| Sbjct: 28939484 cggagggagtacaaggtata 28939465
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14) genes, complete cds; and unknown gene Length = 43606 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||| ||| ||||||||||||| Sbjct: 40402 cttatatttgggaacggagggagtaca 40428
>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0066C06 Length = 162304 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 12 ttatatttaggancggagggagtacaa 38 |||||||| ||| |||||||||||||| Sbjct: 54684 ttatattttggaacggagggagtacaa 54658
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 13 tatatttaggancggagggagta 35 ||||||||||| ||||||||||| Sbjct: 196522 tatatttaggaacggagggagta 196544
>gb|AC008886.5|AC008886 Homo sapiens chromosome 5 clone CTD-2219D10, complete sequence Length = 98955 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 tttttagaagcctgatgcag 400 |||||||||||||||||||| Sbjct: 2414 tttttagaagcctgatgcag 2433
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 9 cacttatatttaggancggagggagta 35 ||||||||||||||| ||||| ||||| Sbjct: 33346 cacttatatttaggaacggagtgagta 33320
>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds, alternatively spliced Length = 2512 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 13 tatatttaggancggagggagta 35 ||||||||||| ||||||||||| Sbjct: 405 tatatttaggaacggagggagta 383
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 atatttaggancggagggagtac 36 |||||||||| |||||||||||| Sbjct: 128815 atatttaggaacggagggagtac 128793
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtaca 37 |||||||||| || ||||||||||||| Sbjct: 64644 cttatatttaagaacggagggagtaca 64670
>dbj|AP006451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1249D05 Length = 132526 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 atatttaggancggagggagtac 36 |||||||||| |||||||||||| Sbjct: 56131 atatttaggaacggagggagtac 56153
>dbj|AP005604.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1212_C12 Length = 147782 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 atatttaggancggagggagtac 36 |||||||||| |||||||||||| Sbjct: 110727 atatttaggaacggagggagtac 110749
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24 Length = 176446 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||| ||| ||||||||||||| Sbjct: 64910 cttatattttggaacggagggagtaca 64936
>gb|AF182197.1|AF182197 Hordeum vulgare RNase S-like protein precursor (rsh1) gene, complete cds Length = 3758 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 13 tatatttaggancggagggagta 35 ||||||||||| ||||||||||| Sbjct: 2135 tatatttaggaacggagggagta 2157
>emb|X03042.2|TAGLU1AG Triticum aestivum Ay gene for high-molecular-weight glutenin Length = 8117 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 tatttaggancggagggagtaca 37 ||||||||| ||||||||||||| Sbjct: 1111 tatttaggaacggagggagtaca 1089
>emb|AL935061.15| Mouse DNA sequence from clone RP23-186P20 on chromosome 2, complete sequence Length = 120330 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 aatgaagagattttgtgctg 299 |||||||||||||||||||| Sbjct: 41949 aatgaagagattttgtgctg 41930
>emb|AL731757.6|CNS08C86 Oryza sativa chromosome 12, . Partial sequence from BAC OJ1281_G01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69648 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 atatttaggancggagggagtac 36 |||||||||| |||||||||||| Sbjct: 53894 atatttaggaacggagggagtac 53916
>gb|AC137068.4| Mus musculus BAC clone RP23-283C17 from 3, complete sequence Length = 176440 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 cagttctctcctttcctccc 250 |||||||||||||||||||| Sbjct: 168911 cagttctctcctttcctccc 168930
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 10 acttatatttaggancggagggagtac 36 |||||||||||||| ||||| |||||| Sbjct: 7549 acttatatttaggaacggagtgagtac 7575
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 40.1 bits (20), Expect = 7.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 cttatatttaggancggagggagtaca 37 ||||||||| ||| ||||||||||||| Sbjct: 16181 cttatattttggaacggagggagtaca 16207 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,516,995 Number of Sequences: 3902068 Number of extensions: 4516995 Number of successful extensions: 96278 Number of sequences better than 10.0: 166 Number of HSP's better than 10.0 without gapping: 185 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94296 Number of HSP's gapped (non-prelim): 1982 length of query: 572 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 549 effective length of database: 17,143,297,704 effective search space: 9411670439496 effective search space used: 9411670439496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
