ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13o08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1291 bits (651), Expect = 0.0 Identities = 716/736 (97%), Gaps = 8/736 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 49901 ctccttttcgccatgcataaactaaaccaacaactaagataagcacgaaaatcaaagctt 49960 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49961 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 50020 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50021 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 50080 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50081 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 50140 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 50141 cactaaccggggctaaaagtcctgaaatcgaaaatgccaaaataggaataaggcttgcta 50200 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacataatgtactcccatt 359 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 50201 ttattagaaatgtccaaaaaatatcatattcgtgaagcagaaacataatgtactcccatt 50260 Query: 360 aatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatccag 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50261 aatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatccag 50320 Query: 420 aacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50321 aacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagt 50380 Query: 480 ttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatcccaa 539 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50381 ttag-cctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatcccaa 50439 Query: 540 ctccctttcttttggatttccattctatttagatatggtgtatgtagatctaattcttat 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50440 ctccctttcttttggatttccattctatttagatatggtgtatgtagatctaattcttat 50499 Query: 600 ataaagaaaactttatcgtttcactttgtctcgctttctctagaatctctatnnnnnnng 659 |||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 50500 ataaagaaaactttctcgtttcactttgtctcgctttctctagaatctcta-gaaaaaag 50558 Query: 660 aatagctctatcctttatttactatttaat-----aataataagagactattaaataaaa 714 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 50559 aatagctctatcctttatttaatatttaataataaaataataagagactattaaataaaa 50618 Query: 715 atgagaatactactaa 730 |||||||||||||||| Sbjct: 50619 atgagaatactactaa 50634
>gb|J04954.1|WHTCPPSBG Triticum aestivum chloroplast NADPH-plastoquinone oxireductase (psbG) and thylakoid membrane protein (ndhC) genes, complete cds Length = 1492 Score = 1116 bits (563), Expect = 0.0 Identities = 586/591 (99%), Gaps = 2/591 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 590 ctccttttcgccatgcataaactaaaccaacaactaagataagcacgaaaatcaaagctt 531 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 471 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 411 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 351 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 350 cactaaccggggctaaaagtcctgaaatcgaaaatgccaaaataggaataaggcttgcta 291 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacataatgtactcccatt 359 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 290 ttattagaaatgtccaaaaaatatcatattcgtgaagcagaaacataatgtactcccatt 231 Query: 360 aatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatccag 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 aatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatccag 171 Query: 420 aacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 aacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagt 111 Query: 480 ttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatcccaa 539 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110 ttag-cctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatcccaa 52 Query: 540 ctccctttcttttggatttccattctatttagatatggtgtatgtagatct 590 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51 ctccctttcttttggatttccattctatttagatatggtgtatgtagatct 1
>emb|X00408.1|CHHV01 Hordeum vulgare chloroplast genes for ATPase subunits B and E, transfer RNA2-Met and transfer RNA1-Val Length = 3819 Score = 936 bits (472), Expect = 0.0 Identities = 512/525 (97%), Gaps = 2/525 (0%) Strand = Plus / Minus Query: 223 aagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaat 282 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3819 aagcttctctggtccttcactaaccggggctaaaatgcctgaaatcgaaaatgccaaaat 3760 Query: 283 aggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtaaagcagaaa 342 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3759 aggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaagcagaaa 3700 Query: 343 cataatgtactcccattaatgtggaataggcggaacttaaattagtcaattcaattcagc 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3699 cataatgtactcccattaatgtggaataggcggaacttaaattagtcaattcaattcagc 3640 Query: 403 attgtcaatttatccagaacttctctcttttcctcggtgaaacaagaatcttttttgttc 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3639 attgtcaatttatccagaacttctctcttttcctcggtgaaacaagaatcttttttgttc 3580 Query: 463 aaacaaaagcgcttagtttagccctttgtttcctctgtgctgcatcttctttaaagattc 522 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 3579 aaacaaaagcgcttagtttag-cctttgtttcctctgtgctgcatcttctttaaagcttc 3521 Query: 523 atccaatggaatcccaactccctttcttttggatttccattctatttagatatggtgtat 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3520 atccaatggaatcccaactccctttcttttggatttccattctatttagatatggtgtat 3461 Query: 583 gtagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctag 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3460 gtagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctag 3401 Query: 643 aatctctatnnnnnnngaatagctctatcctttatttactatttaataataataagagac 702 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3400 aatctctataaaaaaagaatagctctatcctttatttactatttaataataataagagac 3341 Query: 703 tattaaataaaaatgagaatactactaattagnaataattagaac 747 |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 3340 tattaaataaaaatgagaatactactaattag-aataattagaac 3297
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 823 bits (415), Expect = 0.0 Identities = 597/652 (91%), Gaps = 8/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 49258 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 49317 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 49318 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 49377 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 49378 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 49437 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49438 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 49497 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 49498 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 49557 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 49558 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 49617 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 49618 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 49676 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 49677 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 49736 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 49737 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 49795 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 |||||||||||||| ||||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 49796 actccctttctttttgatttcctttctatttaggtatgg----tggagacataattctta 49851 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 49852 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 49903
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 815 bits (411), Expect = 0.0 Identities = 596/652 (91%), Gaps = 8/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 49310 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 49369 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 49370 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 49429 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 49430 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 49489 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49490 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 49549 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 49550 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 49609 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 49610 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 49669 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 49670 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 49728 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 49729 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 49788 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 49789 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 49847 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 || ||||||||||| ||||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 49848 accccctttctttttgatttcctttctatttaggtatgg----tggagacataattctta 49903 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 49904 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 49955
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 815 bits (411), Expect = 0.0 Identities = 596/652 (91%), Gaps = 8/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 49310 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 49369 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 49370 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 49429 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 49430 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 49489 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49490 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 49549 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 49550 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 49609 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 49610 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 49669 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 49670 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 49728 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 49729 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 49788 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 49789 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 49847 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 || ||||||||||| ||||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 49848 accccctttctttttgatttcctttctatttaggtatgg----tggagacataattctta 49903 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 49904 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 49955
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 815 bits (411), Expect = 0.0 Identities = 597/652 (91%), Gaps = 9/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 47513 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 47572 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 47573 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 47632 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 47633 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 47692 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47693 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 47751 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 47752 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 47811 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 47812 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 47871 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 47872 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 47930 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 47931 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 47990 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 47991 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 48049 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 |||||||||||||| ||||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 48050 actccctttctttttgatttcctttctatttaggtatgg----tggagacataattctta 48105 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 48106 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 48157
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 815 bits (411), Expect = 0.0 Identities = 597/652 (91%), Gaps = 9/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 122446 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 122505 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 122506 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 122565 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 122566 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 122625 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122626 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 122684 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 122685 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 122744 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 122745 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 122804 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 122805 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 122863 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 122864 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 122923 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 122924 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 122982 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 |||||||||||||| ||||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 122983 actccctttctttttgatttcctttctatttaggtatgg----tggagacataattctta 123038 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 123039 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 123090
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 815 bits (411), Expect = 0.0 Identities = 596/652 (91%), Gaps = 8/652 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 19945292 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 19945233 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 19945232 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 19945173 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 19945172 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 19945113 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19945112 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 19945053 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 19945052 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 19944993 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 19944992 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 19944933 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 19944932 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 19944874 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 19944873 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 19944814 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 19944813 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 19944755 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 || ||||||||||| ||||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 19944754 accccctttctttttgatttcctttctatttaggtatgg----tggagacataattctta 19944699 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 19944698 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 19944647 Score = 815 bits (411), Expect = 0.0 Identities = 597/652 (91%), Gaps = 9/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 10341121 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 10341180 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 10341181 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 10341240 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 10341241 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 10341300 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10341301 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 10341359 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 10341360 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 10341419 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 10341420 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 10341479 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 10341480 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 10341538 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 10341539 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 10341598 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 10341599 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 10341657 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 |||||||||||||| ||||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 10341658 actccctttctttttgatttcctttctatttaggtatgg----tggagacataattctta 10341713 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 10341714 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 10341765
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 815 bits (411), Expect = 0.0 Identities = 596/652 (91%), Gaps = 8/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 40751 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 40810 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 40811 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 40870 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 40871 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 40930 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40931 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 40990 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 40991 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 41050 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 41051 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 41110 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 41111 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 41169 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 41170 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 41229 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 41230 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 41288 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 || ||||||||||| ||||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 41289 accccctttctttttgatttcctttctatttaggtatgg----tggagacataattctta 41344 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 41345 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 41396
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 815 bits (411), Expect = 0.0 Identities = 596/652 (91%), Gaps = 8/652 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 19956568 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 19956509 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 19956508 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 19956449 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 19956448 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 19956389 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19956388 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 19956329 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 19956328 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 19956269 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 19956268 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 19956209 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 19956208 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 19956150 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 19956149 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 19956090 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 19956089 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 19956031 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 || ||||||||||| ||||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 19956030 accccctttctttttgatttcctttctatttaggtatgg----tggagacataattctta 19955975 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 19955974 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 19955923 Score = 815 bits (411), Expect = 0.0 Identities = 597/652 (91%), Gaps = 9/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 10347160 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 10347219 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 10347220 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 10347279 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 10347280 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 10347339 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10347340 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 10347398 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 10347399 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 10347458 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 10347459 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 10347518 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 10347519 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 10347577 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 10347578 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 10347637 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 10347638 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 10347696 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 |||||||||||||| ||||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 10347697 actccctttctttttgatttcctttctatttaggtatgg----tggagacataattctta 10347752 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 10347753 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 10347804
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 815 bits (411), Expect = 0.0 Identities = 596/652 (91%), Gaps = 8/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 49237 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 49296 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 49297 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 49356 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 49357 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 49416 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49417 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 49476 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 49477 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 49536 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 49537 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 49596 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 49597 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 49655 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 49656 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 49715 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 49716 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 49774 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 |||||||||||||| ||||| | |||||||||| ||||| || ||| ||||||||| Sbjct: 49775 actccctttctttttgatttactttctatttaggtatgg----tggagacataattctta 49830 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 49831 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 49882
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 807 bits (407), Expect = 0.0 Identities = 596/652 (91%), Gaps = 9/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 49317 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 49376 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 49377 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 49436 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 49437 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 49496 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49497 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 49556 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 49557 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 49616 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 49617 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 49676 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 49677 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 49735 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 49736 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaag-gcttag 49794 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 49795 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 49853 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 || ||||||||||| ||||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 49854 accccctttctttttgatttcctttctatttaggtatgg----tggagacataattctta 49909 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 49910 tagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 49961
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 807 bits (407), Expect = 0.0 Identities = 595/652 (91%), Gaps = 8/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 11285472 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 11285531 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 11285532 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 11285591 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 11285592 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 11285651 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11285652 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 11285711 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 11285712 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 11285771 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 11285772 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 11285831 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 11285832 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 11285890 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 11285891 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 11285950 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 11285951 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 11286009 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 |||||||||||||| |||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 11286010 actccctttcttttttatttcctttctatttaggtatgg----tggagacataattctta 11286065 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||| ||||||| ||||||||||||||||| Sbjct: 11286066 tagaaacaaaactctctcgcttcacgttgtctcattttctctagaatctcta 11286117 Score = 785 bits (396), Expect = 0.0 Identities = 595/653 (91%), Gaps = 10/653 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 5608348 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 5608407 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 5608408 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 5608467 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 5608468 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 5608527 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5608528 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 5608586 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgc-caaaataggaataaggcttgct 298 ||| |||||| |||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct: 5608587 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaaataggaataaggcttgct 5608646 Query: 299 attattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactccca 357 ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 5608647 attattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactccca 5608706 Query: 358 ttaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcc 417 ||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| | | Sbjct: 5608707 ttaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttttac 5608765 Query: 418 agaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgctta 477 |||| |||||| ||||||||||||||||||| ||| |||| |||||| |||| ||||| Sbjct: 5608766 agaatttctcttttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggctta 5608825 Query: 478 gtttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccc 537 |||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 5608826 gtttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatccc 5608884 Query: 538 aactccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctt 597 |||||||||||||| ||||||| |||||||||| ||||| || ||| |||||||| Sbjct: 5608885 gactccctttctttttgatttcctttctatttaggtatgg----tggagacataattctt 5608940 Query: 598 atataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 ||| ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 5608941 atagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 5608993 Score = 42.1 bits (21), Expect = 2.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 382 aattagtcaattcaattcagcattgtcaatttatccagaacttctctcttttc 434 ||||| ||||||||| ||| || ||||||||||| || || |||| ||||||| Sbjct: 7761368 aattaatcaattcaagtcaacactgtcaatttatacataagttctatcttttc 7761316
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 807 bits (407), Expect = 0.0 Identities = 595/652 (91%), Gaps = 8/652 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 11285143 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 11285202 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 11285203 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 11285262 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 11285263 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 11285322 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11285323 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 11285382 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 11285383 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 11285442 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 11285443 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 11285502 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 11285503 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 11285561 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 11285562 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 11285621 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 11285622 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 11285680 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 |||||||||||||| |||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 11285681 actccctttcttttttatttcctttctatttaggtatgg----tggagacataattctta 11285736 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||| ||||||| ||||||||||||||||| Sbjct: 11285737 tagaaacaaaactctctcgcttcacgttgtctcattttctctagaatctcta 11285788 Score = 785 bits (396), Expect = 0.0 Identities = 595/653 (91%), Gaps = 10/653 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 5608337 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 5608396 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 5608397 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 5608456 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 5608457 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 5608516 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5608517 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 5608575 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgc-caaaataggaataaggcttgct 298 ||| |||||| |||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct: 5608576 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaaataggaataaggcttgct 5608635 Query: 299 attattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactccca 357 ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 5608636 attattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactccca 5608695 Query: 358 ttaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcc 417 ||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| | | Sbjct: 5608696 ttaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttttac 5608754 Query: 418 agaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgctta 477 |||| |||||| ||||||||||||||||||| ||| |||| |||||| |||| ||||| Sbjct: 5608755 agaatttctcttttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggctta 5608814 Query: 478 gtttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccc 537 |||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 5608815 gtttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatccc 5608873 Query: 538 aactccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctt 597 |||||||||||||| ||||||| |||||||||| ||||| || ||| |||||||| Sbjct: 5608874 gactccctttctttttgatttcctttctatttaggtatgg----tggagacataattctt 5608929 Query: 598 atataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 ||| ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 5608930 atagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 5608982 Score = 42.1 bits (21), Expect = 2.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 382 aattagtcaattcaattcagcattgtcaatttatccagaacttctctcttttc 434 ||||| ||||||||| ||| || ||||||||||| || || |||| ||||||| Sbjct: 7761249 aattaatcaattcaagtcaacactgtcaatttatacataagttctatcttttc 7761197
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 807 bits (407), Expect = 0.0 Identities = 595/652 (91%), Gaps = 8/652 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 86582 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 86523 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 86522 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 86463 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 86462 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 86403 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86402 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 86343 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 86342 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 86283 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 86282 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 86223 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| || Sbjct: 86222 taatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttataca 86164 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttag 478 ||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||| Sbjct: 86163 gaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttag 86104 Query: 479 tttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccca 538 ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 86103 tttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcccg 86045 Query: 539 actccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctta 598 |||||||||||||| |||||| |||||||||| ||||| || ||| ||||||||| Sbjct: 86044 actccctttcttttttatttcctttctatttaggtatgg----tggagacataattctta 85989 Query: 599 tataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 || ||| |||||| | ||| ||||| ||||||| ||||||||||||||||| Sbjct: 85988 tagaaacaaaactctctcgcttcacgttgtctcattttctctagaatctcta 85937
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 797 bits (402), Expect = 0.0 Identities = 599/660 (90%), Gaps = 16/660 (2%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 51872 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 51931 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 51932 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtagagaaagactg 51991 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 51992 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 52051 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52052 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 52111 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 52112 cactaaccggggctaaaagtcctgaaatccaaaataccaaaataggaataaggcttgcta 52171 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacataa-tgtactcccat 358 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 52172 ttattagaaatgtccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 52231 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 ||||||||||||||||||||| || ||||||||||||| | ||||||||||||||||| Sbjct: 52232 taatgtggaataggcggaactgaa-ttagtcaattcaagttgacattgtcaatttatcca 52290 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaa-------- 470 ||||||||||||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 52291 gaacttctctcttttcctcggtgaaacaagaatctgttttgctcaaaccaaaggcaagga 52350 Query: 471 gcgcttagtttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatg 530 ||||||| ||||||| ||| |||| | |||| | ||||| |||| ||||||||||||| Sbjct: 52351 gcgcttactttagcc-tttatttcttttgtgatatgtcttccttaaggattcatccaatg 52409 Query: 531 gaatcccaactccctttcttttggatttccattctatttagatatggtgtatgtagatct 590 |||||| ||| || ||||||| ||||||| ||||||||||||||| || |||| || Sbjct: 52410 taatccccacttcccttctttttgatttcccttctatttagatatg----atatagacct 52465 Query: 591 aattcttatataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 |||||||||| |||||||||| | ||| ||||||||||||| |||||||||||||||||| Sbjct: 52466 aattcttatacaaagaaaactctttcgcttcactttgtctcactttctctagaatctcta 52525 Score = 48.1 bits (24), Expect = 0.042 Identities = 39/44 (88%) Strand = Plus / Plus Query: 682 tatttaataataataagagactattaaataaaaatgagaatact 725 |||||||| ||| | ||||||||||||||||||| || |||||| Sbjct: 52549 tatttaatgatagtcagagactattaaataaaaaagaaaatact 52592
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 797 bits (402), Expect = 0.0 Identities = 599/660 (90%), Gaps = 16/660 (2%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 114026 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 114085 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 114086 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtagagaaagactg 114145 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 114146 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 114205 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114206 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 114265 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 114266 cactaaccggggctaaaagtcctgaaatccaaaataccaaaataggaataaggcttgcta 114325 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 114326 ttattagaaatgtccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 114385 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||| Sbjct: 114386 taatgtggaataggcggaac-tgaattagtcaattcaagttgacattgtcaatttatcca 114444 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaa--------a 470 ||||||||||||||||||||||||||||||||||| ||||| |||||| || | Sbjct: 114445 gaacttctctcttttcctcggtgaaacaagaatctgttttgctcaaaccaaaggcaagga 114504 Query: 471 gcgcttagtttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatg 530 ||||||| ||||| |||||||||| | |||| | ||||| |||| ||||||||||||| Sbjct: 114505 gcgcttactttag-cctttgtttcttttgtgatatgtcttccttaaggattcatccaatg 114563 Query: 531 gaatcccaactccctttcttttggatttccattctatttagatatggtgtatgtagatct 590 |||||| ||| | ||||||| ||||||| ||||||||||||||| || |||| || Sbjct: 114564 taatccccacttgccttctttttgatttcccttctatttagatatg----atatagacct 114619 Query: 591 aattcttatataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 |||||||||| |||||||||| | ||| ||||||||||||| |||||||||||||||||| Sbjct: 114620 aattcttatacaaagaaaactctttcgcttcactttgtctcactttctctagaatctcta 114679 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 697 agagactattaaataaaaatgagaatact 725 ||||||||||||||||||| || |||||| Sbjct: 114718 agagactattaaataaaaaagaaaatact 114746
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 797 bits (402), Expect = 0.0 Identities = 599/660 (90%), Gaps = 16/660 (2%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 51861 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 51920 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 51921 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtagagaaagactg 51980 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 51981 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 52040 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52041 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 52100 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 52101 cactaaccggggctaaaagtcctgaaatccaaaataccaaaataggaataaggcttgcta 52160 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacataa-tgtactcccat 358 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 52161 ttattagaaatgtccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 52220 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 ||||||||||||||||||||| || ||||||||||||| | ||||||||||||||||| Sbjct: 52221 taatgtggaataggcggaactgaa-ttagtcaattcaagttgacattgtcaatttatcca 52279 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaa-------- 470 ||||||||||||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 52280 gaacttctctcttttcctcggtgaaacaagaatctgttttgctcaaaccaaaggcaagga 52339 Query: 471 gcgcttagtttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatg 530 ||||||| ||||||| ||| |||| | |||| | ||||| |||| ||||||||||||| Sbjct: 52340 gcgcttactttagcc-tttatttcttttgtgatatgtcttccttaaggattcatccaatg 52398 Query: 531 gaatcccaactccctttcttttggatttccattctatttagatatggtgtatgtagatct 590 |||||| ||| || ||||||| ||||||| ||||||||||||||| || |||| || Sbjct: 52399 taatccccacttcccttctttttgatttcccttctatttagatatg----atatagacct 52454 Query: 591 aattcttatataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 |||||||||| |||||||||| | ||| ||||||||||||| |||||||||||||||||| Sbjct: 52455 aattcttatacaaagaaaactctttcgcttcactttgtctcactttctctagaatctcta 52514 Score = 48.1 bits (24), Expect = 0.042 Identities = 39/44 (88%) Strand = Plus / Plus Query: 682 tatttaataataataagagactattaaataaaaatgagaatact 725 |||||||| ||| | ||||||||||||||||||| || |||||| Sbjct: 52538 tatttaatgatagtcagagactattaaataaaaaagaaaatact 52581
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 797 bits (402), Expect = 0.0 Identities = 599/660 (90%), Gaps = 16/660 (2%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 52399 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 52458 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 52459 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtagagaaagactg 52518 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 52519 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 52578 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52579 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 52638 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 52639 cactaaccggggctaaaagtcctgaaatccaaaataccaaaataggaataaggcttgcta 52698 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 52699 ttattagaaatgtccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 52758 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||| Sbjct: 52759 taatgtggaataggcggaac-tgaattagtcaattcaagttgacattgtcaatttatcca 52817 Query: 419 gaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaa--------a 470 ||||||||||||||||||||||||||||||||||| ||||| |||||| || | Sbjct: 52818 gaacttctctcttttcctcggtgaaacaagaatctgttttgctcaaaccaaaggcaagga 52877 Query: 471 gcgcttagtttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatg 530 ||||||| ||||| |||||||||| | |||| | ||||| |||| ||||||||||||| Sbjct: 52878 gcgcttactttag-cctttgtttcttttgtgatatgtcttccttaaggattcatccaatg 52936 Query: 531 gaatcccaactccctttcttttggatttccattctatttagatatggtgtatgtagatct 590 |||||| ||| | ||||||| ||||||| ||||||||||||||| || |||| || Sbjct: 52937 taatccccacttgccttctttttgatttcccttctatttagatatg----atatagacct 52992 Query: 591 aattcttatataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 |||||||||| |||||||||| | ||| ||||||||||||| |||||||||||||||||| Sbjct: 52993 aattcttatacaaagaaaactctttcgcttcactttgtctcactttctctagaatctcta 53052 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 697 agagactattaaataaaaatgagaatact 725 ||||||||||||||||||| || |||||| Sbjct: 53091 agagactattaaataaaaaagaaaatact 53119
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 785 bits (396), Expect = 0.0 Identities = 595/653 (91%), Gaps = 10/653 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 44537 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 44478 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 44477 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 44418 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 44417 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 44358 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44357 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 44299 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgc-caaaataggaataaggcttgct 298 ||| |||||| |||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct: 44298 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaaataggaataaggcttgct 44239 Query: 299 attattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactccca 357 ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 44238 attattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactccca 44179 Query: 358 ttaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcc 417 ||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| | | Sbjct: 44178 ttaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttttac 44120 Query: 418 agaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgctta 477 |||| |||||| ||||||||||||||||||| ||| |||| |||||| |||| ||||| Sbjct: 44119 agaatttctcttttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggctta 44060 Query: 478 gtttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccc 537 |||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 44059 gtttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatccc 44001 Query: 538 aactccctttcttttggatttccattctatttagatatggtgtatgtagatctaattctt 597 |||||||||||||| ||||||| |||||||||| ||||| || ||| |||||||| Sbjct: 44000 gactccctttctttttgatttcctttctatttaggtatgg----tggagacataattctt 43945 Query: 598 atataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 ||| ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 43944 atagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 43892
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 755 bits (381), Expect = 0.0 Identities = 591/654 (90%), Gaps = 14/654 (2%) Strand = Plus / Minus Query: 5 ttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgat 63 |||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 12589470 ttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgat 12589411 Query: 64 aaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttc 123 ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 12589410 aaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttc 12589351 Query: 124 cacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtaccca 183 ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| Sbjct: 12589350 cacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaacca 12589291 Query: 184 agcc----cctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12589290 agcctcctccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 12589231 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgc--caaaataggaataaggcttgc 297 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||| Sbjct: 12589230 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaaaataggaataaggcttgc 12589171 Query: 298 tattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactccc 356 |||||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 12589170 tattattagaaatgcccaaaaaatatcatattcatgaagcagaaacataaatgtactccc 12589111 Query: 357 attaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatc 416 |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 12589110 attaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttata 12589052 Query: 417 cagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgctt 476 ||||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||| Sbjct: 12589051 cagaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggctt 12588992 Query: 477 agtttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatcc 536 ||||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||| Sbjct: 12588991 agtttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcc 12588933 Query: 537 caactccctttcttttggatttccattctatttagatatggtgtatgtagatctaattct 596 |||||||||||||| ||||||| |||||||||| ||||| || ||| ||||||| Sbjct: 12588932 tgactccctttctttttgatttcctttctatttaggtatgg----tggagacataattct 12588877 Query: 597 tatataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 |||| ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 12588876 tatagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 12588823 Score = 48.1 bits (24), Expect = 0.042 Identities = 30/32 (93%) Strand = Plus / Minus Query: 619 ttcactttgtctcgctttctctagaatctcta 650 ||||||||||||| ||||||||||||||||| Sbjct: 23209172 ttcactttgtctcattttctctagaatctcta 23209141
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 755 bits (381), Expect = 0.0 Identities = 591/654 (90%), Gaps = 14/654 (2%) Strand = Plus / Minus Query: 5 ttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgat 63 |||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 71783 ttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgat 71724 Query: 64 aaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttc 123 ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 71723 aaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttc 71664 Query: 124 cacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtaccca 183 ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| Sbjct: 71663 cacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaacca 71604 Query: 184 agcc----cctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71603 agcctcctccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 71544 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgc--caaaataggaataaggcttgc 297 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||| Sbjct: 71543 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaaaataggaataaggcttgc 71484 Query: 298 tattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactccc 356 |||||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 71483 tattattagaaatgcccaaaaaatatcatattcatgaagcagaaacataaatgtactccc 71424 Query: 357 attaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatc 416 |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 71423 attaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttata 71365 Query: 417 cagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgctt 476 ||||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||| Sbjct: 71364 cagaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggctt 71305 Query: 477 agtttagccctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatcc 536 ||||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||| Sbjct: 71304 agtttag-cctttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcc 71246 Query: 537 caactccctttcttttggatttccattctatttagatatggtgtatgtagatctaattct 596 |||||||||||||| ||||||| |||||||||| ||||| || ||| ||||||| Sbjct: 71245 tgactccctttctttttgatttcctttctatttaggtatgg----tggagacataattct 71190 Query: 597 tatataaagaaaactttatcgtttcactttgtctcgctttctctagaatctcta 650 |||| ||| |||||| | ||| ||||||||||||| ||||||||||||||||| Sbjct: 71189 tatagaaacaaaactctctcgcttcactttgtctcattttctctagaatctcta 71136
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 720 bits (363), Expect = 0.0 Identities = 547/604 (90%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 48 aaatcaaagcttcgataaaaacggatacacccaatacgtcgaaactcattgcccaagggt 107 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 77624 aaatgaaagcttcgataaaaacggatatacccaatacgtcgaaactcattgcccaaaggt 77683 Query: 108 atagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgta 167 | |||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 77684 agagaaagaccgtttcgacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgta 77743 Query: 168 ttcggaattgtacccaagcccctcccatgggttctatacccgattcataactagaaagct 227 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 77744 ttcggaattgtaaccaagccccccccatgggttctatacccgattcataactagaaagct 77803 Query: 228 tctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaa 287 ||||||||||||||| |||||| |||||||| |||||||| ||||||| ||||||| || Sbjct: 77804 tctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaatagaaa 77863 Query: 288 taaggcttgctattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-a 346 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | Sbjct: 77864 taaggcttgctattattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataa 77923 Query: 347 atgtactcccattaatgtggaataggcggaacttaaattagtcaattcaattcagcattg 406 |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 77924 atgtactcccattaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattg 77982 Query: 407 tcaatttatccagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaac 466 ||||||||| ||||| |||||||||||||| ||||||||||| ||| |||| |||||| Sbjct: 77983 tcaatttatacagaatttctctcttttccttggtgaaacaaggatcggtttttctcaaac 78042 Query: 467 aaaagcgcttagtttagccctttgtttcctctgtgctgcatcttctttaaagattcatcc 526 |||| ||||||||||| |||||||||||||| ||| | |||||||||||||||||||| Sbjct: 78043 caaagggcttagtttag-cctttgtttcctctttgccacgtcttctttaaagattcatcc 78101 Query: 527 aatggaatcccaactccctttcttttggatttccattctatttagatatggtgtatgtag 586 ||| ||||||| |||||||||||||| ||||||| |||||||||| ||||| || || Sbjct: 78102 aatagaatcccgactccctttctttttgatttcctttctatttaggtatgg----tggag 78157 Query: 587 atctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctagaatc 646 | ||||||||||| ||| |||||| | ||| ||||||||||||| ||||||||||||| Sbjct: 78158 acataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctagaatc 78217 Query: 647 tcta 650 |||| Sbjct: 78218 tcta 78221
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 720 bits (363), Expect = 0.0 Identities = 547/604 (90%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 48 aaatcaaagcttcgataaaaacggatacacccaatacgtcgaaactcattgcccaagggt 107 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 23634943 aaatgaaagcttcgataaaaacggatatacccaatacgtcgaaactcattgcccaaaggt 23635002 Query: 108 atagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgta 167 | |||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 23635003 agagaaagaccgtttcgacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgta 23635062 Query: 168 ttcggaattgtacccaagcccctcccatgggttctatacccgattcataactagaaagct 227 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 23635063 ttcggaattgtaaccaagccccccccatgggttctatacccgattcataactagaaagct 23635122 Query: 228 tctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaa 287 ||||||||||||||| |||||| |||||||| |||||||| ||||||| ||||||| || Sbjct: 23635123 tctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaatagaaa 23635182 Query: 288 taaggcttgctattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-a 346 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | Sbjct: 23635183 taaggcttgctattattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataa 23635242 Query: 347 atgtactcccattaatgtggaataggcggaacttaaattagtcaattcaattcagcattg 406 |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 23635243 atgtactcccattaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattg 23635301 Query: 407 tcaatttatccagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaac 466 ||||||||| ||||| |||||||||||||| ||||||||||| ||| |||| |||||| Sbjct: 23635302 tcaatttatacagaatttctctcttttccttggtgaaacaaggatcggtttttctcaaac 23635361 Query: 467 aaaagcgcttagtttagccctttgtttcctctgtgctgcatcttctttaaagattcatcc 526 |||| ||||||||||| |||||||||||||| ||| | |||||||||||||||||||| Sbjct: 23635362 caaagggcttagtttag-cctttgtttcctctttgccacgtcttctttaaagattcatcc 23635420 Query: 527 aatggaatcccaactccctttcttttggatttccattctatttagatatggtgtatgtag 586 ||| ||||||| |||||||||||||| ||||||| |||||||||| ||||| || || Sbjct: 23635421 aatagaatcccgactccctttctttttgatttcctttctatttaggtatgg----tggag 23635476 Query: 587 atctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctagaatc 646 | ||||||||||| ||| |||||| | ||| ||||||||||||| ||||||||||||| Sbjct: 23635477 acataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctagaatc 23635536 Query: 647 tcta 650 |||| Sbjct: 23635537 tcta 23635540 Score = 638 bits (322), Expect = e-180 Identities = 453/490 (92%), Gaps = 5/490 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 14047935 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 14047994 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 14047995 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 14048054 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 14048055 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgta 14048114 Query: 180 cccaag-cccctcccatgggttctatacccgattcataactagaaagcttctctggtcct 238 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14048115 accaagcccccccccatgggttctatacccgattcataactagaaagcttctctggtcct 14048174 Query: 239 tcactaaccggggc-taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgc 297 |||| |||||| || |||||| |||||||| ||||||| |||||||||||||||||||| Sbjct: 14048175 tcacgaaccggagcttaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgc 14048234 Query: 298 tattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactccc 356 |||||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 14048235 tattattagaaatgcccaaaaaatattatattcgtgaagcagaaacataaatgtactccc 14048294 Query: 357 attaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatc 416 |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 14048295 attaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttata 14048353 Query: 417 cagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgctt 476 ||||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||| Sbjct: 14048354 cagaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggctt 14048413 Query: 477 agtttagccc 486 |||||||||| Sbjct: 14048414 agtttagccc 14048423 Score = 634 bits (320), Expect = e-178 Identities = 454/493 (92%), Gaps = 8/493 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 9749023 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 9748964 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 9748963 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 9748904 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 9748903 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 9748844 Query: 180 cccaag----cccctcccatgggttctatacccgattcataactagaaagcttctctggt 235 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9748843 accaagccccccccccccatgggttctatacccgattcataactagaaagcttctctggt 9748784 Query: 236 ccttcactaaccggggc-taaaagccctgaaatcgaaaatgccaaaataggaataaggct 294 ||||||| |||||| || |||||| |||||||| ||||||| ||||||||||||||||| Sbjct: 9748783 ccttcacaaaccggagcttaaaagtgctgaaatccaaaatgctaaaataggaataaggct 9748724 Query: 295 tgctattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtact 353 ||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 9748723 tgctattattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtact 9748664 Query: 354 cccattaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaattt 413 |||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||| Sbjct: 9748663 cccattaatgtggaatagttggaac-tgaattagtcaattcaagtcagcattgtcaattt 9748605 Query: 414 atccagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcg 473 || ||||| |||||||||||||||||||||||||| ||| |||| |||||| |||| | Sbjct: 9748604 atacagaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaaggg 9748545 Query: 474 cttagtttagccc 486 ||||||||||||| Sbjct: 9748544 cttagtttagccc 9748532
>gb|AY243565.1| Hordeum vulgare chloroplast Ndh complex operon, complete sequence Length = 1778 Score = 686 bits (346), Expect = 0.0 Identities = 356/358 (99%), Gaps = 1/358 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ctccttttcgccatgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 303 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 243 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 183 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 123 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 63 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacataatgtactccca 357 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 62 ttattagaaatgtccaaaaaatatcatattcgtgaagcagaaacataatgtactccca 5
>emb|X17438.1|CHZMNPOO Maize chloroplast ndhC, psbG genes for NDH-C, PSII-G and ORF159 Length = 1933 Score = 654 bits (330), Expect = 0.0 Identities = 410/433 (94%), Gaps = 3/433 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 432 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 373 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 372 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtagagaaagactg 313 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 312 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 253 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 252 accaagccccccccatgggttctatacccgantcataactagaaagcttctctggtcctt 193 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 192 cactaaccggggctaaaagtcctgaaatccaaaataccaaaataggaataaggcttgcta 133 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 132 ttattagaaatgtccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccat 73 Query: 359 taatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatcca 418 |||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||| Sbjct: 72 taatgtggaataggcggaac-tgaattagtcaattcaagttgacattgtcaatttatcca 14 Query: 419 gaacttctctctt 431 ||||||||||||| Sbjct: 13 gaacttctctctt 1
>emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0024J22, complete sequence Length = 174430 Score = 638 bits (322), Expect = e-180 Identities = 453/490 (92%), Gaps = 5/490 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 161815 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 161874 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 161875 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 161934 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 161935 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgta 161994 Query: 180 cccaag-cccctcccatgggttctatacccgattcataactagaaagcttctctggtcct 238 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161995 accaagcccccccccatgggttctatacccgattcataactagaaagcttctctggtcct 162054 Query: 239 tcactaaccggggc-taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgc 297 |||| |||||| || |||||| |||||||| ||||||| |||||||||||||||||||| Sbjct: 162055 tcacgaaccggagcttaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgc 162114 Query: 298 tattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactccc 356 |||||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 162115 tattattagaaatgcccaaaaaatattatattcgtgaagcagaaacataaatgtactccc 162174 Query: 357 attaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatc 416 |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 162175 attaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttata 162233 Query: 417 cagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgctt 476 ||||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||| Sbjct: 162234 cagaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggctt 162293 Query: 477 agtttagccc 486 |||||||||| Sbjct: 162294 agtttagccc 162303
>emb|AL662942.4|OSJN00135 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033H08, complete sequence Length = 141899 Score = 638 bits (322), Expect = e-180 Identities = 453/490 (92%), Gaps = 5/490 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 124957 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 124898 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 124897 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 124838 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 124837 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgta 124778 Query: 180 cccaag-cccctcccatgggttctatacccgattcataactagaaagcttctctggtcct 238 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124777 accaagcccccccccatgggttctatacccgattcataactagaaagcttctctggtcct 124718 Query: 239 tcactaaccggggc-taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgc 297 |||| |||||| || |||||| |||||||| ||||||| |||||||||||||||||||| Sbjct: 124717 tcacgaaccggagcttaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgc 124658 Query: 298 tattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactccc 356 |||||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 124657 tattattagaaatgcccaaaaaatattatattcgtgaagcagaaacataaatgtactccc 124598 Query: 357 attaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatc 416 |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 124597 attaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttata 124539 Query: 417 cagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgctt 476 ||||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||| Sbjct: 124538 cagaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggctt 124479 Query: 477 agtttagccc 486 |||||||||| Sbjct: 124478 agtttagccc 124469
>dbj|AK069240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010F18, full insert sequence Length = 3557 Score = 638 bits (322), Expect = e-180 Identities = 453/490 (92%), Gaps = 5/490 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 1806 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 1747 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 1746 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 1687 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 1686 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgta 1627 Query: 180 cccaag-cccctcccatgggttctatacccgattcataactagaaagcttctctggtcct 238 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1626 accaagcccccccccatgggttctatacccgattcataactagaaagcttctctggtcct 1567 Query: 239 tcactaaccggggc-taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgc 297 |||| |||||| || |||||| |||||||| ||||||| |||||||||||||||||||| Sbjct: 1566 tcacgaaccggagcttaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgc 1507 Query: 298 tattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactccc 356 |||||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 1506 tattattagaaatgcccaaaaaatattatattcgtgaagcagaaacataaatgtactccc 1447 Query: 357 attaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatc 416 |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 1446 attaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttata 1388 Query: 417 cagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgctt 476 ||||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||| Sbjct: 1387 cagaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggctt 1328 Query: 477 agtttagccc 486 |||||||||| Sbjct: 1327 agtttagccc 1318
>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12, complete sequence Length = 128574 Score = 634 bits (320), Expect = e-178 Identities = 454/493 (92%), Gaps = 8/493 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 81229 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 81170 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 81169 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 81110 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 81109 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 81050 Query: 180 cccaag----cccctcccatgggttctatacccgattcataactagaaagcttctctggt 235 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81049 accaagccccccccccccatgggttctatacccgattcataactagaaagcttctctggt 80990 Query: 236 ccttcactaaccggggc-taaaagccctgaaatcgaaaatgccaaaataggaataaggct 294 ||||||| |||||| || |||||| |||||||| ||||||| ||||||||||||||||| Sbjct: 80989 ccttcacaaaccggagcttaaaagtgctgaaatccaaaatgctaaaataggaataaggct 80930 Query: 295 tgctattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtact 353 ||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 80929 tgctattattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtact 80870 Query: 354 cccattaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaattt 413 |||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||| Sbjct: 80869 cccattaatgtggaatagttggaac-tgaattagtcaattcaagtcagcattgtcaattt 80811 Query: 414 atccagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcg 473 || ||||| |||||||||||||||||||||||||| ||| |||| |||||| |||| | Sbjct: 80810 atacagaatttctctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaaggg 80751 Query: 474 cttagtttagccc 486 ||||||||||||| Sbjct: 80750 cttagtttagccc 80738
>ref|NM_197447.1| Oryza sativa (japonica cultivar-group) NADH dehydrogenase ND3 (OSJNBb0005J14.29), mRNA Length = 363 Score = 527 bits (266), Expect = e-146 Identities = 327/346 (94%), Gaps = 1/346 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 346 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 287 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 286 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 227 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 226 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 167 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 107 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 106 cacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgcta 47 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat 345 |||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 46 ttattagaaatgcccaaaaaatatcatattcgtgaagcagaaacat 1
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 402 bits (203), Expect = e-109 Identities = 246/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 33553316 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 33553257 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 33553256 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 33553197 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 33553196 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 33553137 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33553136 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 33553077 Query: 240 cactaaccggggctaaaag 258 ||| |||||| |||||||| Sbjct: 33553076 cacgaaccggagctaaaag 33553058 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 33512946 tagcgtattcggaattgtaaccaagc 33512971 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 33512872 aaacggaaacgcccaatacatcgaaactcattaccca 33512908 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 2523840 aaacggaaacgcccaatacatcgaaactcattaccca 2523876
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 402 bits (203), Expect = e-109 Identities = 246/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 98513 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 98454 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 98453 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 98394 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 98393 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 98334 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98333 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 98274 Query: 240 cactaaccggggctaaaag 258 ||| |||||| |||||||| Sbjct: 98273 cacgaaccggagctaaaag 98255 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 58143 tagcgtattcggaattgtaaccaagc 58168 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 58069 aaacggaaacgcccaatacatcgaaactcattaccca 58105
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 361 bits (182), Expect = 2e-96 Identities = 296/334 (88%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| |||||||||||||||||| |||||||| ||||| || || Sbjct: 52199 tgcataaactaaaccaacaattaagataagcacgaaaattaaagcttctataaatacaga 52258 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||| ||||| ||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52259 tacacctaatacatcgaaactcattgcccatggataaagaaaaactgtttcaacatcaaa 52318 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| || Sbjct: 52319 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcattgcc 52378 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||||||||||||||| || |||||||| |||| |||| |||||| Sbjct: 52379 cattggttctatacccgattcataactagagagtttctctggccctttgctaatcggggc 52438 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||||| ||| ||||| |||||||||||||||||||||| |||| |||||||||||||| Sbjct: 52439 taaaaccccggaaatgaaaaatgccaaaataggaataagacttgatattattagaaatgc 52498 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacata 346 |||||||||||||||||||||||||||||||||| Sbjct: 52499 ccaaaaaatatcatattcgtaaagcagaaacata 52532
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 347 bits (175), Expect = 3e-92 Identities = 305/347 (87%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||| |||| |||| || ||||||||||||||| ||||||| Sbjct: 54163 ctccttttcgccatgcataaactgaaccaacaattaggataagcacgaaaattaaagctt 54222 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| ||||||||||||||||| ||||||||||||||||| || || ||||| || | Sbjct: 54223 ctataaatacggatacacccaatacatcgaaactcattgcccatggataaagaaaaaccg 54282 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| ||||||||||| |||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 54283 tttcaacatcaaaaacgacaaaaactagagcaaacatataataacggattcgaaattgta 54342 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 54343 accaagcatcgcccattggttctatacccgattcataactagaaagtttctctggtcctt 54402 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||||| ||| ||||||| || ||||| ||||||||||||| ||||||| |||| || Sbjct: 54403 tactaatcggagctaaaactccggaaataaaaaatgccaaaatgggaataacacttgata 54462 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacata 346 |||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 54463 ttattagaaaagcccagaaaatatcatattcgtaaagcagaaacata 54509
>gb|AY936342.1| Evolvulus glomeratus NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1744 Score = 345 bits (174), Expect = 1e-91 Identities = 304/346 (87%), Gaps = 1/346 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| ||||||||||||||| ||| |||||||||||| ||||| ||||||| Sbjct: 346 ctccctttcgccatgcataaactaaaccaccaattaagataagcacaaaaatgaaagctt 287 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||| ||| || |||||||||||||| ||||||||||||||||| ||||| ||||| || | Sbjct: 286 cgagaaatacagatacacccaatacatcgaaactcattgcccatgggtaaagaaaaaccg 227 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 226 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattcgaaattgta 167 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| ||||||||||||||||| |||||||| || | Sbjct: 166 accaagcatcgcccattggttctatacctgattcataactagaaagtttctctggcccct 107 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 |||| ||||||||||| ||| |||||| |||| | |||||||||||||||||| | || Sbjct: 106 tgctaatcggggctaaaaccccggaaatcaaaaaagtcaaaataggaataaggctggata 47 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat 345 |||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 46 ttattagaaatgcccaaaaaatatcatattcgtaaagtagaaacat 1
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 341 bits (172), Expect = 2e-90 Identities = 324/372 (87%), Gaps = 2/372 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 53848 ctccttttcgccatgcataaactgaaccaacaactgggataagcacgaaaatcaaagctt 53907 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| ||| |||| ||||||| || ||||||| ||||| || || |||||||| | Sbjct: 53908 ctataaatacgtatacgcccaatatatcaaaactcacggcccatggataaagaaagaccg 53967 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| ||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||| Sbjct: 53968 tttcgacatcaaaaacaacaaaaacgagagcaaacatgtaatagcggattcgaaattgta 54027 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | || || ||||||||||||||||||||||| || |||||||||||||||| Sbjct: 54028 tccaagcatcccctattggttctatacccgattcataactggagagcttctctggtcctt 54087 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 |||||| |||||||||| ||| ||||| |||||||||||||||||||| |||| || Sbjct: 54088 cactaattggggctaaaaccccggaaattagaaatgccaaaataggaataacacttgata 54147 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacata-atgtactcccat 358 | |||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| || Sbjct: 54148 tcattagaaatgcccagaaaatatcatattcgtaaagcagaaacatagatgtactcctat 54207 Query: 359 taatgtggaata 370 ||||| ||||| Sbjct: 54208 gaatgtagaata 54219
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 341 bits (172), Expect = 2e-90 Identities = 324/372 (87%), Gaps = 2/372 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| |||||||||| |||| |||| | ||||||||||||||| ||||||| Sbjct: 50996 ctccctttcgccatgcataaactgaaccaacaattgggataagcacgaaaattaaagctt 51055 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| || |||||||||| ||| ||||||||||||||||| || || |||||||| | Sbjct: 51056 ctataaatacagatacacccagtacatcgaaactcattgcccatggataaagaaagaccg 51115 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||| |||||||| ||||||||||||| Sbjct: 51116 tttcaacatcaaaaacaacaaaaactagagcaaacatgtaatagcggattcggaattgta 51175 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 51176 accaagcatcccccattggttctatacctgattcataactagagagcttctctggtcctt 51235 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| || ||||||||||| || ||||| |||||||||||||||||| | |||| || Sbjct: 51236 cacgaatcggggctaaaactccggaaattagaaatgccaaaataggaatgacacttgata 51295 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacata-atgtactcccat 358 |||||||||||| ||| |||||||||||||||| ||||||||||||| ||| ||||| || Sbjct: 51296 ttattagaaatgcccagaaaatatcatattcgtgaagcagaaacatagatgcactcctat 51355 Query: 359 taatgtggaata 370 ||||||||||| Sbjct: 51356 gaatgtggaata 51367
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 339 bits (171), Expect = 8e-90 Identities = 304/347 (87%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| |||| || ||||||||||||||| ||||||| Sbjct: 54376 ctccttttcgccatgcataaactaaaccaacaattaggataagcacgaaaattaaagctt 54435 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||| |||||||| ||||||||||||||||| || || ||||| || | Sbjct: 54436 ctataaatacggatacccccaatacatcgaaactcattgcccatggataaagaaaaaccg 54495 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 54496 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattcgaaattgta 54555 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| ||||||||||| ||||| |||||||| |||| Sbjct: 54556 accaagcatcgcccattggttctatacctgattcataactcgaaagtttctctggccctt 54615 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 |||| ||||||||||| || ||||| |||||||||||||||||||| |||| || Sbjct: 54616 tgctaatcggggctaaaattccggaaattmgaaatgccaaaataggaataacacttgata 54675 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacata 346 |||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 54676 ttattagaaatgcccagaaaatatcatattcgtaaagcagaaacata 54722
>gb|AY936338.1| Jacquemontia tamnifolia NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1706 Score = 331 bits (167), Expect = 2e-87 Identities = 290/331 (87%) Strand = Plus / Minus Query: 15 cataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacggata 74 ||||||||||||| ||| |||||||||||| |||||||||||||| ||||| || |||| Sbjct: 331 cataaactaaaccaccaattaagataagcacaaaaatcaaagcttctataaatacagata 272 Query: 75 cacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaaaa 134 ||||||||| ||||||||||||||||| || || ||||| || ||||| |||||||||| Sbjct: 271 gacccaatacatcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaaaa 212 Query: 135 caacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctccca 194 ||||||||||||| |||||||||||||| || ||||| ||||||| |||||| | |||| Sbjct: 211 caacaaaaacgagagcaaacatataataacggattcgaaattgtaaccaagcatcgccca 152 Query: 195 tgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggcta 254 ||||||| ||||| ||||||||||||||||| |||||||| |||| |||| |||||||| Sbjct: 151 tgggttcgataccggattcataactagaaagtttctctgggcctttgctaatcggggcta 92 Query: 255 aaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgtcc 314 ||| || |||||| |||| ||||||||||||| ||||| | |||||||||||||| || Sbjct: 91 aaacgccggaaatcaaaaaagccaaaataggaaacaggctggatattattagaaatgccc 32 Query: 315 aaaaaatatcatattcgtaaagcagaaacat 345 |||||||||||||||||||||| |||||||| Sbjct: 31 aaaaaatatcatattcgtaaagtagaaacat 1
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 331 bits (167), Expect = 2e-87 Identities = 293/335 (87%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 51502 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 51561 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 51562 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 51621 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 51622 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 51681 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 51682 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 51741 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||| | || ||||| |||||||||||||||||| |||| ||| |||||||||||||| Sbjct: 51742 taacactccggaaatgaaaaatgccaaaataggaacaaggattgatattattagaaatgc 51801 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacataa 347 |||||||| |||||||||||||||||||||||||| Sbjct: 51802 ccaaaaaaaatcatattcgtaaagcagaaacataa 51836
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 331 bits (167), Expect = 2e-87 Identities = 293/335 (87%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 51421 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 51480 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 51481 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 51540 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 51541 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 51600 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| |||||||| |||| |||| |||||| Sbjct: 51601 cattggttctatacccgactcataagtagaaagtttctctggccctttgctaatcggggc 51660 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||| | || ||||| |||||||||||||||||| |||| | | |||||||||||||| Sbjct: 51661 taacactccggaaatgaaaaatgccaaaataggaacaaggatggatattattagaaatgc 51720 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacataa 347 |||||||| |||||||||||||||||||||||||| Sbjct: 51721 ccaaaaaaaatcatattcgtaaagcagaaacataa 51755
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 331 bits (167), Expect = 2e-87 Identities = 293/335 (87%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 51417 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 51476 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 51477 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 51536 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 51537 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 51596 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| |||||||| |||| |||| |||||| Sbjct: 51597 cattggttctatacccgactcataagtagaaagtttctctggccctttgctaatcggggc 51656 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||| | || ||||| |||||||||||||||||| |||| | | |||||||||||||| Sbjct: 51657 taacactccggaaatgaaaaatgccaaaataggaacaaggatggatattattagaaatgc 51716 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacataa 347 |||||||| |||||||||||||||||||||||||| Sbjct: 51717 ccaaaaaaaatcatattcgtaaagcagaaacataa 51751
>gb|AY936340.1| Falkia repens NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1715 Score = 329 bits (166), Expect = 8e-87 Identities = 302/346 (87%), Gaps = 1/346 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| ||||||||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 346 ctccctttcgccatgcataaactaaaccaccaattaagataagcacgaaaataaaagctt 287 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | | ||| || |||||||||||||| ||||||||||||||||| || || ||||| || | Sbjct: 286 ctagaaatacagatacacccaatacatcgaaactcattgcccatggataaagaaaaaccg 227 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || |||| ||||||| Sbjct: 226 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattctaaattgta 167 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 166 accaagcatcgcccattggttctatacctgattcataactagaaagtttctctggccctt 107 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| ||||||||||| ||| ||||| |||| |||||||||||||||||||| | || Sbjct: 106 tgttaatcggggctaaaaccccggaaataaaaaaagccaaaataggaataaggctggata 47 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat 345 |||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 46 ttattagaaatgcccaaaaaatatcatattcgtaaagtagaaacat 1
>gb|AY936336.1| Operculina aequisepala NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1721 Score = 329 bits (166), Expect = 8e-87 Identities = 302/346 (87%), Gaps = 1/346 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| ||||||||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 346 ctccctttcgccatgcataaactaaaccaccaattaagataagcacgaaaatgaaagctt 287 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | | ||| || |||||||||||||| ||||||||||||||||| || || ||||| || | Sbjct: 286 ctagaaatacagatacacccaatacatcgaaactcattgcccatggataaagaaaaaccg 227 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 226 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattcgaaattgta 167 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 166 accaagcatcgcccataggttctatacctgattcataactagaaagtttctctggccctt 107 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 |||| ||||||||||| ||| |||| |||| |||||||||||||||||||| | || Sbjct: 106 tgctaatcggggctaaaaccccggaaagaaaaaaagccaaaataggaataaggctggata 47 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat 345 |||||||||||| |||||||| ||||||||||||||| |||||||| Sbjct: 46 ttattagaaatgcccaaaaaagatcatattcgtaaagtagaaacat 1
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 329 bits (166), Expect = 8e-87 Identities = 292/334 (87%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 |||||||||| |||| |||| || |||||||||||||||||||||||| | ||| ||||| Sbjct: 50654 tgcataaactgaaccaacaattaggataagcacgaaaatcaaagcttctagaaatacgga 50713 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||| ||||||||||||||||| || || |||||||| ||||| |||||||| Sbjct: 50714 tacacccaatacatcgaaactcattgcccatggataaagaaagaccgtttcaacatcaaa 50773 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| | |||||||||||||| || |||||||||||||||||||| | || Sbjct: 50774 aacaacaaaaactaaagcaaacatataatatcggattcggaattgtacccaagcatcccc 50833 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 || ||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 50834 tattggttctatacccgattcataactagaaagcttctcgggtccttccctcgttggggc 50893 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||||| || ||||| ||||||| ||||||||||||| |||| ||||| |||||||| Sbjct: 50894 taaaactccggaaattaaaaatgctaaaataggaataacacttgatattagtagaaatgc 50953 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacata 346 ||| |||||||||||||||| ||||||||||||| Sbjct: 50954 ccagaaaatatcatattcgtgaagcagaaacata 50987 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 561 attctatttagatatggtgta 581 ||||||||||||||||||||| Sbjct: 51170 attctatttagatatggtgta 51190
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 323 bits (163), Expect = 5e-85 Identities = 292/335 (87%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 52341 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 52400 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52401 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 52460 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 52461 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 52520 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 52521 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 52580 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||| | || ||||| |||||||||||||||||| |||| | | |||||||||||||| Sbjct: 52581 taacactccggaaattaaaaatgccaaaataggaacaaggatagatattattagaaatgc 52640 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacataa 347 |||||||| |||||||||||||||||||||||||| Sbjct: 52641 ccaaaaaaaatcatattcgtaaagcagaaacataa 52675
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 323 bits (163), Expect = 5e-85 Identities = 302/347 (87%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| ||||||||||||||| |||| |||||||||||| ||||| ||||||| Sbjct: 49533 ctccctttcgccatgcataaactaaaccaacaattaagataagcacaaaaattaaagctt 49592 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | | ||| || |||||||| ||||| ||||||||||||||||| || || ||||| || | Sbjct: 49593 ctacaaatacagatacacctaatacatcgaaactcattgcccatggataaagaaaaaccg 49652 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct: 49653 tttccacatcaaaaacaacaaaaacaagagcaaacatataatagcggattctaaattgta 49712 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | || || ||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 49713 accaagcgtcacctattggttctatacctgattcataactagaaagtttctccggtcctt 49772 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| ||||||||||| || ||||| ||||| |||||||||||||||| |||| || Sbjct: 49773 tgctactcggggctaaaaatcccgaaatgaaaaataccaaaataggaataagacttgata 49832 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacata 346 |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 49833 ttatcagaaatgcccaaaaaatatcatattcgtaaagcagaaacata 49879
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 323 bits (163), Expect = 5e-85 Identities = 292/335 (87%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 51366 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 51425 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 51426 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 51485 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 51486 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 51545 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 51546 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 51605 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||| | || ||||| |||||||||||||||||| |||| | | |||||||||||||| Sbjct: 51606 taacactccggaaatgaaaaatgccaaaataggaacaaggatggatattattagaaatgc 51665 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacataa 347 |||||||| |||||||||||||||||||||||||| Sbjct: 51666 ccaaaaaaaatcatattcgtaaagcagaaacataa 51700
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 323 bits (163), Expect = 5e-85 Identities = 292/335 (87%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 52339 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 52398 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52399 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 52458 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 52459 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 52518 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 52519 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 52578 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||| | || ||||| |||||||||||||||||| |||| | | |||||||||||||| Sbjct: 52579 taacactccggaaattaaaaatgccaaaataggaacaaggatagatattattagaaatgc 52638 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacataa 347 |||||||| |||||||||||||||||||||||||| Sbjct: 52639 ccaaaaaaaatcatattcgtaaagcagaaacataa 52673
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 323 bits (163), Expect = 5e-85 Identities = 292/335 (87%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 52289 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 52348 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52349 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 52408 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 52409 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 52468 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 52469 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 52528 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||| | || ||||| |||||||||||||||||| |||| | | |||||||||||||| Sbjct: 52529 taacactccggaaattaaaaatgccaaaataggaacaaggatggatattattagaaatgc 52588 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacataa 347 |||||||| |||||||||||||||||||||||||| Sbjct: 52589 ccaaaaaaaatcatattcgtaaagcagaaacataa 52623
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 321 bits (162), Expect = 2e-84 Identities = 317/366 (86%), Gaps = 2/366 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||| |||| || | | ||||||||||||||| ||||||| Sbjct: 54850 ctccttttcgccatgcataaactgaaccaacgattgggataagcacgaaaattaaagctt 54909 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||| |||||||| ||||||||||| ||||| || || ||||| |||| Sbjct: 54910 ctataaatacggatacgcccaatacatcgaaactcatggcccatggataaagaaaaacgg 54969 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||| |||||||| ||||||||||||| Sbjct: 54970 tttcgacatcaaaaacaacaaaaactagggcaaacatgtaatagcggattcggaattgta 55029 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| |||||||||||||| | ||| |||||||||| Sbjct: 55030 tccaagcatcccccattggttctatacctgattcataactagagaccttttctggtcctt 55089 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||||| ||||||||||| || ||||| |||||||||||||||||||| |||| || Sbjct: 55090 gactaatcggggctaaaactccagaaattagaaatgccaaaataggaataacacttgata 55149 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacata-atgtactcccat 358 | |||||||||| ||| |||||||||||||||| ||||||||||||| ||||||||| || Sbjct: 55150 tcattagaaatgcccagaaaatatcatattcgtgaagcagaaacatagatgtactcctat 55209 Query: 359 taatgt 364 ||||| Sbjct: 55210 gaatgt 55215
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 315 bits (159), Expect = 1e-82 Identities = 301/347 (86%), Gaps = 1/347 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||| ||||| | ||||||||||||||||||||| | ||||| Sbjct: 14158 ctccttttcgccatgcataaaccaaaccaagaactaagataagcacgaaaatgagagctt 14099 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||| ||||||| |||||||||| |||||| || || ||||| | || Sbjct: 14098 ctataaatacggatacccccaatatatcgaaactcagtgcccatggataaagaaaaatgg 14039 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| | |||||||||||||| |||||||| ||||||| Sbjct: 14038 tttcaacatcaaaaacaacaaaaactaaagcaaacatataataacgtattcgaaattgta 13979 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 13978 accaagcatcgcccattggttctatacccgattcataactcgaaagtttctctggcccta 13919 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| |||||||||||| || ||||| |||||||||||||||||||| |||| || Sbjct: 13918 tgctagtcggggctaaaagtccggaaattcgaaatgccaaaataggaataacacttgata 13859 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacata 346 |||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 13858 ttattagaaatgcccagaaaatatcatattcgtaaagcagaaacata 13812
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 315 bits (159), Expect = 1e-82 Identities = 291/335 (86%) Strand = Plus / Minus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 |||||||||| |||| |||| || |||||||||||| || |||||||| ||||| ||||| Sbjct: 11072 tgcataaactgaaccaacaattaggataagcacgaatatgaaagcttctataaatacgga 11013 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 ||| || ||||| |||||||||||||||||||| || ||||| || ||||| |||||||| Sbjct: 11012 tacccctaatacatcgaaactcattgcccaaggataaagaaaaaccgtttcaacatcaaa 10953 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 ||||||||||| ||| |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 10952 aacaacaaaaatgagagcaaacatataataacggattcgaaattgtaaccaagcatcacc 10893 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 || |||||||| |||||||||||||||||||| ||||||||||| | |||| |||||| Sbjct: 10892 tattggttctattcccgattcataactagaaagtttctctggtcccttgctaatcggggc 10833 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||||| || ||||| |||||||||||||||||||| |||| |||||||||||||| Sbjct: 10832 taaaattccagaaattagaaatgccaaaataggaataaaacttgatattattagaaatgc 10773 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacataa 347 |||||||||||||||||||||||| |||||||||| Sbjct: 10772 ccaaaaaatatcatattcgtaaagaagaaacataa 10738
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 313 bits (158), Expect = 5e-82 Identities = 290/334 (86%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| |||||||||||||||||| |||||||| | ||| || || Sbjct: 49925 tgcataaactaaaccaacaattaagataagcacgaaaattaaagcttctacaaatacaga 49984 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 49985 tacacctaatacatcaaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 50044 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || ||||||||||||||||| |||| ||||||| |||||| | || Sbjct: 50045 aacaacaaaaactagagcaaacatataatagcggattctaaattgtaaccaagcgtcgcc 50104 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 || ||||||||||||||||||||||||||||| ||||| ||||||| |||| ||| || Sbjct: 50105 tattggttctatacccgattcataactagaaagtttctccggtcctttgctaatcggagc 50164 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||||| || ||||| ||||| |||||||||||||||| |||| ||| |||||||||| Sbjct: 50165 taaaaatcccgaaatgaaaaataccaaaataggaataagacttgatatgattagaaatgc 50224 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacata 346 |||||||||||||||||| ||||||||||||||| Sbjct: 50225 ccaaaaaatatcatattcataaagcagaaacata 50258
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 313 bits (158), Expect = 5e-82 Identities = 319/370 (86%), Gaps = 2/370 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct: 52871 ctccttttcgccatgcataaactaaaccgacaattaggataagcacgaaaattaaagctt 52930 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||| || ||||| || |||||||||||||| || || ||||| || | Sbjct: 52931 ctataaagacggatacccctaatacatcaaaactcattgcccacggataaagaaaaactg 52990 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || |||| ||||||| Sbjct: 52991 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattctaaattgta 53050 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||| | ||||| |||||||| |||||||||||||| ||||| |||||||| ||| Sbjct: 53051 cccaagcatcgcccattggttctattcccgattcataactcgaaagtttctctggctctt 53110 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 |||| |||||||||| || ||||| |||||||||||||||||||| |||| || Sbjct: 53111 tgctaagaggggctaaaactccagaaattagaaatgccaaaataggaataacacttgata 53170 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 ||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||| || Sbjct: 53171 ttattagaaatacccagaaaatatcatattcgtaaagcagaaacataaacgtactcctat 53230 Query: 359 taatgtggaa 368 ||||||||| Sbjct: 53231 caatgtggaa 53240
>gb|AY936344.1| Dinetus truncatus NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1710 Score = 313 bits (158), Expect = 5e-82 Identities = 300/346 (86%), Gaps = 1/346 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| ||||||||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 346 ctccctttcgccatgcataaactaaaccaccaattaagataagcacgaaaatgaaagctt 287 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | | ||| ||||||||||||||||| ||||||||||||||||| || || ||||| || | Sbjct: 286 ctagaaatacggatacacccaatacatcgaaactcattgcccatggataaagaaaaaccg 227 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| ||||||||||||||||| || || |||||||||||||| || |||| ||||||| Sbjct: 226 tttcaacatcaaaaacaacaaacactagagcaaacatataataacggattctaaattgta 167 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| ||||||||||||||||| |||||||| || | Sbjct: 166 accaagcatcgcccatcggttctatacctgattcataactagaaagtttctctggcccct 107 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 |||| ||||||||||| || |||||| |||| |||||||||||||||||| | | || Sbjct: 106 tgctaagcggggctaaaactccggaaatcaaaaaagccaaaataggaataaggatggata 47 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat 345 |||||||||||| |||||||| ||||||||||||||| |||||||| Sbjct: 46 ttattagaaatgcccaaaaaagatcatattcgtaaagtagaaacat 1
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 313 bits (158), Expect = 5e-82 Identities = 319/370 (86%), Gaps = 2/370 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct: 52845 ctccttttcgccatgcataaactaaaccgacaattaggataagcacgaaaattaaagctt 52904 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||| || ||||| || |||||||||||||| || || ||||| || | Sbjct: 52905 ctataaagacggatacccctaatacatcaaaactcattgcccacggataaagaaaaactg 52964 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || |||| ||||||| Sbjct: 52965 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattctaaattgta 53024 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||| | ||||| |||||||| |||||||||||||| ||||| |||||||| ||| Sbjct: 53025 cccaagcatcgcccattggttctattcccgattcataactcgaaagtttctctggctctt 53084 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 |||| |||||||||| || ||||| |||||||||||||||||||| |||| || Sbjct: 53085 tgctaagaggggctaaaactccagaaattagaaatgccaaaataggaataacacttgata 53144 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccat 358 ||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||| || Sbjct: 53145 ttattagaaatacccagaaaatatcatattcgtaaagcagaaacataaacgtactcctat 53204 Query: 359 taatgtggaa 368 ||||||||| Sbjct: 53205 caatgtggaa 53214
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 313 bits (158), Expect = 5e-82 Identities = 290/334 (86%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| |||||||||||||||||| |||||||| | ||| || || Sbjct: 49924 tgcataaactaaaccaacaattaagataagcacgaaaattaaagcttctacaaatacaga 49983 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 49984 tacacctaatacatcaaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 50043 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || ||||||||||||||||| |||| ||||||| |||||| | || Sbjct: 50044 aacaacaaaaactagagcaaacatataatagcggattctaaattgtaaccaagcgtcgcc 50103 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 || ||||||||||||||||||||||||||||| ||||| ||||||| |||| ||| || Sbjct: 50104 tattggttctatacccgattcataactagaaagtttctccggtcctttgctaatcggagc 50163 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||||| || ||||| ||||| |||||||||||||||| |||| ||| |||||||||| Sbjct: 50164 taaaaatcccgaaatgaaaaataccaaaataggaataagacttgatatgattagaaatgc 50223 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacata 346 |||||||||||||||||| ||||||||||||||| Sbjct: 50224 ccaaaaaatatcatattcataaagcagaaacata 50257
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 307 bits (155), Expect = 3e-80 Identities = 300/347 (86%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||| |||| |||| || ||||||||||||||| ||||||| Sbjct: 53475 ctccttttcgccatgcataaactgaaccaacaattaggataagcacgaaaatgaaagctt 53534 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | || || |||| ||| |||||||| ||||||||||||||||| || || ||||| || | Sbjct: 53535 ctatgaatacgggtacccccaatacatcgaaactcattgcccatggataaagaaaaaccg 53594 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 53595 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattcgaaattgta 53654 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||||||||||||||||||||| || ||||| || | Sbjct: 53655 accaagcatcgcccattggttctatacccgattcataactagaaagtttttctggaccct 53714 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 |||| ||||||||||| || ||||| ||||||||||||||||||| |||| || Sbjct: 53715 ttctaatcggggctaaaactccagaaattagaaatgccaaaataggaatagcacttgata 53774 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacata 346 |||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 53775 ttattagaaatgcccagaaaatatcatattcgtaaagcagaaacata 53821
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 307 bits (155), Expect = 3e-80 Identities = 290/335 (86%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||| ||||||||||| |||||||| ||||| || || Sbjct: 51975 tgcataaactaaaccaataattaagatcagcacgaaaatgaaagcttctataaatacaga 52034 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52035 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 52094 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || |||| ||||||| |||||| | || Sbjct: 52095 aacaacaaaaactagagcaaacatataataacggattctaaattgtaaccaagcatcgcc 52154 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| ||||| Sbjct: 52155 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaattggggc 52214 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||| | || ||||| |||||||||||||||||| |||| ||| |||||||||||||| Sbjct: 52215 taacactccggaaatgaaaaatgccaaaataggaacaaggattgatattattagaaatgc 52274 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacataa 347 |||||||| |||||||||||||||||||||||||| Sbjct: 52275 ccaaaaaaaatcatattcgtaaagcagaaacataa 52309
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 307 bits (155), Expect = 3e-80 Identities = 290/335 (86%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||| ||||||||| |||||||| ||||| || || Sbjct: 51508 tgcataaactaaaccaataattaagataaccacgaaaatgaaagcttctataaatacaga 51567 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 ||||||||||| |||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 51568 tacacccaataggtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 51627 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| | |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 51628 aacaacaaaaactacagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 51687 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 51688 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 51747 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||| | || ||||| |||||||||||||||||| |||| ||| |||||||||||||| Sbjct: 51748 taacactccggaaatgaaaaatgccaaaataggaagaaggattgatattattagaaatgc 51807 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacataa 347 |||||||| |||||||||||||||||||||||||| Sbjct: 51808 ccaaaaaaaatcatattcgtaaagcagaaacataa 51842
>gb|U27653.1|LLU27653 Lupinus luteus NADH-plastoquinone oxidoreductase (ndhC) gene, chloroplast gene encoding chloroplast protein, complete cds Length = 363 Score = 303 bits (153), Expect = 4e-79 Identities = 288/333 (86%) Strand = Plus / Minus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| || |||||||||||||||||||||||| ||||| ||||| Sbjct: 333 tgcataaactaaaccaacaattaggataagcacgaaaatcaaagcttctataaatacgga 274 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 ||| |||||||| ||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 273 tacccccaatacatcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 214 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || |||| ||||||| |||||| | || Sbjct: 213 aacaacaaaaactagagcaaacatataataacggattctaaattgtaaccaagcatcgcc 154 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||| |||||||||||||| || || ||||||||||| | |||| ||||| Sbjct: 153 cattggttctattcccgattcataactcgagagtttctctggtcccttgctaattggggc 94 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||||| || ||||| ||||||| ||||| ||||||||||| | ||||||||||||| Sbjct: 93 taaaattccagaaattaaaaatgctaaaatcggaataaggctcgagattattagaaatgc 34 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacat 345 |||||||||||||||||||||||||| |||||| Sbjct: 33 ccaaaaaatatcatattcgtaaagcaaaaacat 1
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 299 bits (151), Expect = 7e-78 Identities = 299/347 (86%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| |||| || ||||||||||||||| ||||||| Sbjct: 48999 ctccttttcgccatgcataaactaaaccaacaattaggataagcacgaaaattaaagctt 49058 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||||||||||| ||||||||||||||||| || || ||||| || | Sbjct: 49059 ctataaatacggatacacccaatatatcgaaactcattgcccatggataaagaaaaaccg 49118 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 49119 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattcgaaattgta 49178 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 49179 accaagcatcccccataggttctatacccgattcgtaactagaaagtttctcgggtcctt 49238 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 |||| ||| ||||||| || |||| |||||| ||||||||||||| |||| || Sbjct: 49239 tgctaatcggtgctaaaattccggaaaatagaaatgctaaaataggaataacacttgata 49298 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacata 346 |||||| ||||| ||| |||||||||||||| ||||| ||||||||| Sbjct: 49299 ttattaaaaatgcccagaaaatatcatattcataaagtagaaacata 49345
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 297 bits (150), Expect = 3e-77 Identities = 304/354 (85%), Gaps = 1/354 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| || |||||| ||||| || |||||||| ||||| ||||| Sbjct: 113165 tgcataaactaaaccaacaattaggataaggacgaagatgaaagcttctataaatacgga 113224 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 ||| |||||||| || |||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 113225 tacccccaatacatcaaaactcattgcccatgggtaaagaaagactgtttcaacatcaaa 113284 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||| | ||||||| |||||| | || Sbjct: 113285 aacaacaaaaactagagcaaacatataataacggatttgaaattgtaaccaagcatcgcc 113344 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||| || ||||||||||||||||| || ||||| |||| |||| || || Sbjct: 113345 catcggttctatcccagattcataactagaaagtttttctggcccttttctaattggagc 113404 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||||| || |||||| |||||||||||||||||||| | | | ||||||||||||||| Sbjct: 113405 taaaattccagaaatcagaaatgccaaaataggaataaagatcgatattattagaaatgt 113464 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccattaatgtg 365 |||||||||||||||||| ||||||| |||||| |||||||||| || |||||| Sbjct: 113465 ccaaaaaatatcatattcataaagcaaaaacataaatgtactcctatgaatgtg 113518
>gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-66d22, complete sequence Length = 116154 Score = 281 bits (142), Expect = 2e-72 Identities = 302/354 (85%), Gaps = 1/354 (0%) Strand = Plus / Minus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| || |||||| ||||| || |||||||| ||||| ||||| Sbjct: 83488 tgcataaactaaaccaacaattaggataaggacgaagatgaaagcttctataaatacgga 83429 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 ||| |||||||| || |||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 83428 tacccccaatacatcaaaactcattgcccatgggtaaagaaagactgtttcaacatcaaa 83369 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||| | ||||||| |||||| | || Sbjct: 83368 aacaacaaaaactagagcaaacatataataacggatttgaaattgtaaccaagcatcgcc 83309 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||| | ||||||||||| ||||| || ||||| |||| |||| || || Sbjct: 83308 catcggttctatcctagattcataacttgaaagtttttctggcccttttctaattggagc 83249 Query: 253 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 312 ||||| || |||||| |||||||||||||||||||| | | | ||||||||||||||| Sbjct: 83248 taaaattccagaaatcagaaatgccaaaataggaataaagatcgatattattagaaatgt 83189 Query: 313 ccaaaaaatatcatattcgtaaagcagaaacat-aatgtactcccattaatgtg 365 |||||||||||||||||| ||||||| |||||| |||||||||| || |||||| Sbjct: 83188 ccaaaaaatatcatattcataaagcaaaaacataaatgtactcctatgaatgtg 83135
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 268 bits (135), Expect = 2e-68 Identities = 282/331 (85%) Strand = Plus / Minus Query: 17 taaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacggataca 76 |||||| |||| |||| || ||||||||| || ||||||||||| ||||| ||||||| Sbjct: 11027 taaactgaaccaacaattaggataagcacaaagatcaaagcttctataaatacggatatc 10968 Query: 77 cccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaaaaca 136 |||||||| || |||||||||||||| || || ||||| || ||||| |||||||||||| Sbjct: 10967 cccaatacatcaaaactcattgcccatggataaagaaaaaccgtttcaacatcaaaaaca 10908 Query: 137 acaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcccatg 196 |||||||| || |||||||||||||| || ||| | ||||||| |||||| ||||||| Sbjct: 10907 acaaaaactagagcaaacatataataacggatttgaaattgtaaccaagcatctcccatt 10848 Query: 197 ggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaaa 256 |||||||| |||||||||||||||||||| |||||||| |||| ||| |||||| ||| Sbjct: 10847 ggttctattcccgattcataactagaaagtttctctggccctttgttaatcggggccaaa 10788 Query: 257 agccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgtccaa 316 | || ||||| | |||||||||||| ||||||| | | | |||||||||||||| |||| Sbjct: 10787 aagccagaaattgtaaatgccaaaatcggaataaagatcgatattattagaaatgcccaa 10728 Query: 317 aaaatatcatattcgtaaagcagaaacataa 347 |||||||||||||| ||||||| |||||||| Sbjct: 10727 aaaatatcatattcataaagcaaaaacataa 10697
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 252 bits (127), Expect = 1e-63 Identities = 293/347 (84%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| | || || ||||||||||||||| ||||||| Sbjct: 49080 ctccttttcgccatgcataaactaaaccaagaattaggataagcacgaaaatgaaagctt 49139 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | |||||| ||||||| || | ||| ||||||||||||||||| || || ||||| |||| Sbjct: 49140 ctataaaagcggatacccctagtacatcgaaactcattgcccacggatacagaaaaacgg 49199 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || |||| ||||||| Sbjct: 49200 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattctaaattgta 49259 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | || || ||||||||||| ||||||||||||||||| ||||| || || | Sbjct: 49260 accaagcatccccgatcggttctatacctgattcataactagaaagtttctccggcccct 49319 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 ||| || | ||||| ||| ||||| ||||||||||| ||||||| |||| || Sbjct: 49320 tcgtaattggagataaaaccccggaaattagaaatgccaaaacaggaatagcacttgata 49379 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacata 346 |||||| ||||| ||| |||||||||||||||||||||||||||||| Sbjct: 49380 ttattaaaaatgcccagaaaatatcatattcgtaaagcagaaacata 49426
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 236 bits (119), Expect = 9e-59 Identities = 291/347 (83%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| | || || ||||||||||||||| ||||||| Sbjct: 50018 ctccttttcgccatgcataaactaaaccaagaattaggataagcacgaaaatgaaagctt 50077 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | |||||| | ||||| |||| ||| ||||||||||||||||| || || ||||| || | Sbjct: 50078 ctataaaagcagatacccccagtacatcgaaactcattgcccacggatacagaaaaacag 50137 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || |||| ||||||| Sbjct: 50138 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattctaaattgta 50197 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | || || ||||||||||| ||||||||||||||||| ||||| || || | Sbjct: 50198 accaagcatccccgatcggttctatacctgattcataactagaaagtttctccggcccct 50257 Query: 240 cactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgcta 299 |||| || | ||||| || ||||| ||||||||||| ||||||| |||| || Sbjct: 50258 tcctaattggagataaaactccggaaattagaaatgccaaaacaggaatagcacttgata 50317 Query: 300 ttattagaaatgtccaaaaaatatcatattcgtaaagcagaaacata 346 ||| || ||||| ||| |||||||||||||||||||||||||||||| Sbjct: 50318 ttagtaaaaatgcccagaaaatatcatattcgtaaagcagaaacata 50364
>gb|M12704.1|MZECPPS2G Maize chloroplast psbG gene encoding PSII-G protein, complete cds Length = 1027 Score = 196 bits (99), Expect = 7e-47 Identities = 138/147 (93%), Gaps = 3/147 (2%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 151 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 92 Query: 60 c-gataaaaacggatacacccaatacgtc-gaaactcattgcccaagggtatagaaagac 117 | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 91 ccgataaaaacggatacacccaatacgtcagaaactcattgcccaagggtagagaaagac 32 Query: 118 ggtttccacatcaaaaacaacaaaaac 144 |||||||||||||||||||||||||| Sbjct: 31 tgtttccacatcaaaaacaacaaaaac 5
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 172 bits (87), Expect = 1e-39 Identities = 196/231 (84%), Gaps = 1/231 (0%) Strand = Plus / Minus Query: 136 aacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcccat 195 ||||||||| || |||||||||||||| || ||| | ||||||| |||||| | ||||| Sbjct: 101182 aacaaaaactagagcaaacatataataacggatttgaaattgtaaccaagcatcgcccat 101123 Query: 196 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 255 |||||||| || ||||||||||||||||| || ||||| |||| |||| || ||||| Sbjct: 101122 cggttctatcccagattcataactagaaagtttttctggcccttttctaattggagctaa 101063 Query: 256 aagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgtcca 315 || || |||||| |||||||||||||||||||| | | | |||||||||||||||||| Sbjct: 101062 aattccagaaatcagaaatgccaaaataggaataaagatcgatattattagaaatgtcca 101003 Query: 316 aaaaatatcatattcgtaaagcagaaacat-aatgtactcccattaatgtg 365 ||||||||||||||| ||||||| |||||| |||||||||| || |||||| Sbjct: 101002 aaaaatatcatattcataaagcaaaaacataaatgtactcctatgaatgtg 100952
>emb|CT863710.2| Medicago truncatula chromosome 5 clone mth2-52h19, COMPLETE SEQUENCE Length = 118754 Score = 137 bits (69), Expect = 6e-29 Identities = 145/169 (85%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 198 gttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaaaa 257 ||||||| || ||||||||||||||||| || ||||| |||| |||| || ||||||| Sbjct: 114622 gttctatcccagattcataactagaaagtttttctggcccttttctaattggagctaaaa 114563 Query: 258 gccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgtccaaa 317 || |||||| |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 114562 ttccagaaatcagaaatgccaaaataggaataaagatcgatattattagaaatgtccaaa 114503 Query: 318 aaatatcatattcgtaaagcagaaacat-aatgtactcccattaatgtg 365 ||||||||||||| ||||||| |||||| |||||||||| || |||||| Sbjct: 114502 aaatatcatattcataaagcaaaaacataaatgtactcctatgaatgtg 114454
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 107 bits (54), Expect = 5e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 196 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 255 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 35298991 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 35298932 Query: 256 aa 257 || Sbjct: 35298931 aa 35298930
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 107 bits (54), Expect = 5e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 196 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 255 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 35389063 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 35389004 Query: 256 aa 257 || Sbjct: 35389003 aa 35389002
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 107 bits (54), Expect = 5e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 196 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 255 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 69463 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 69522 Query: 256 aa 257 || Sbjct: 69523 aa 69524
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 101 bits (51), Expect = 3e-18 Identities = 126/151 (83%) Strand = Plus / Minus Query: 89 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 148 |||||||| ||||| || |||| ||| || ||||| |||||||||| ||||||||| | | Sbjct: 29693 aaactcatggcccatggatataaaaaaactgtttctacatcaaaaataacaaaaactaac 29634 Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 || |||||||||||||| ||| ||||||| | |||||| | ||||| |||||||| || Sbjct: 29633 gcgaacatataatagcgaatttggaattgaatccaagcatcacccattggttctattcct 29574 Query: 209 gattcataactagaaagcttctctggtcctt 239 ||||||||||||| || || |||||||||| Sbjct: 29573 gattcataactagttagtttttctggtcctt 29543
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 410 atttatccagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaac 466 |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 486770 atttctccagaacttctctcttttcctcggtgaaacaagaatctcttttgctcaaac 486826
>dbj|AB087446.1| Anthoceros formosae chloroplast ndhK, ndhC mRNA for NADH dehydrogenase 27 kDa subunit, NADH dehydrogenase ND3 subunit, partial and complete cds Length = 443 Score = 89.7 bits (45), Expect = 1e-14 Identities = 129/157 (82%) Strand = Plus / Plus Query: 89 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 148 |||||||| ||||| || || ||||| || ||||| |||||||||| ||| ||||| | Sbjct: 185 aaactcatagcccatggatagagaaaaacagtttcaacatcaaaaataacgaaaactaaa 244 Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 |||||||||||||| || ||| | ||||| | |||||| ||||||| ||||||||||| Sbjct: 245 gcaaacatataataacgaatttgaaattgaatccaagcatctcccataggttctatacca 304 Query: 209 gattcataactagaaagcttctctggtccttcactaa 245 |||||||||||| || || |||||||||| ||||| Sbjct: 305 cattcataactagtaaatttttctggtcctttactaa 341
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 89 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 148 |||||||| |||||||| || ||||| || ||||| |||||||||| |||||||| | Sbjct: 52621 aaactcatagcccaaggataaagaaaaactgtttctacatcaaaaattacaaaaactaaa 52680 Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 |||||||||||||| || ||| | ||||| | ||||| ||||||| ||||||||||| Sbjct: 52681 gcaaacatataatatcgaatttgaaattgaatacaagcttctcccatcggttctatacct 52740 Query: 209 gattcataact 219 ||||||||||| Sbjct: 52741 gattcataact 52751
>gb|AC155886.2| Medicago truncatula chromosome 7 BAC clone mth2-173o24, complete sequence Length = 119696 Score = 75.8 bits (38), Expect = 2e-10 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 271 aaatgccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattc 330 |||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||| Sbjct: 37643 aaatgccaaaatagcaataacaattgatattattagaaatacccaaaaaatatcatattt 37584 Query: 331 gtaaagcagaaacat-aatgtactcc 355 |||||| | |||||| |||||||||| Sbjct: 37583 gtaaagaaaaaacataaatgtactcc 37558
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 89 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 148 |||||||| ||||| || || ||| | || ||||| |||||||||| ||| ||||| | Sbjct: 68028 aaactcatagcccatggatagagagaaacagtttcaacatcaaaaataacgaaaactaaa 68087 Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 |||||||||||||| || ||| ||||| | |||||| ||||||| ||||||||||| Sbjct: 68088 gcaaacatataataacgaatttaaaattggatccaagcatctcccataggttctatacca 68147 Query: 209 gattcataactagaaagcttctctggtccttcactaa 245 |||||||||||| || || |||||||||| ||||| Sbjct: 68148 cattcataactagtaaatttttctggtcctttactaa 68184
>dbj|D43695.1|APNCPRBCLA Anthoceros formosae chloroplast DNA for ndhK, atpB, accD, partial cds, and ndhC, atpE, rbcL, complete cds Length = 7556 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 89 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 148 |||||||| ||||| || || ||| | || ||||| |||||||||| ||| ||||| | Sbjct: 339 aaactcatagcccatggatagagagaaacagtttcaacatcaaaaataacgaaaactaaa 398 Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 |||||||||||||| || ||| ||||| | |||||| ||||||| ||||||||||| Sbjct: 399 gcaaacatataataacgaatttaaaattgaatccaagcatctcccataggttctatacca 458 Query: 209 gattcataactagaaagcttctctggtccttcactaa 245 |||||||||||| || || |||||||||| ||||| Sbjct: 459 cattcataactagtaaatttttctggtcctttactaa 495
>gb|U72654.1|EGU72654 Eustoma grandiflorum flavonoid 3'5'-hydroxylase (F3'5'H) mRNA, complete cds Length = 2124 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 298 tattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat 345 ||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 2032 tattattagaaatgtccaaaaaaaatcatatttgtaaatcagaaacat 1985
>dbj|D14589.1| Eustoma russellianum mRNA for flavonoid 3',5'-hydroxylase, complete cds Length = 2174 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 298 tattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacat 345 ||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 2029 tattattagaaatgtccaaaaaaaatcatatttgtaaatcagaaacat 1982 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 197 ggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||||| ||||||||||||||||| || || |||||||||| Sbjct: 2130 ggttctatccccgattcataactagacagtttttctggtcctt 2088
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 67.9 bits (34), Expect = 5e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 92 ctcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgca 151 ||||| ||||| ||||| || || || ||||| || ||||| |||||||| || | ||| Sbjct: 108886 ctcatagcccatgggtaaaggaatacagtttctacgtcaaatacaacaaacactaaggca 108945 Query: 152 aacatataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgat 211 ||||||||||| || ||| ||||||||| ||||| | ||||| ||||||||||| || Sbjct: 108946 aacatataataacgaatttggaattgtatccaagattcgcccataggttctatacctgac 109005 Query: 212 tcataactag 221 |||||||||| Sbjct: 109006 tcataactag 109015
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 65.9 bits (33), Expect = 2e-07 Identities = 208/265 (78%), Gaps = 1/265 (0%) Strand = Plus / Plus Query: 5 ttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgat 63 |||||||| ||||||||||||||| | || || |||| |||||| || | |||||| || Sbjct: 51811 ttttcgccatgcataaactaaaccaataattagaataaacacgaatattagagcttcaat 51870 Query: 64 aaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttc 123 |||| || ||| ||| ||| | | |||||||| ||||| || || ||||| || ||||| Sbjct: 51871 aaaagcgaatatacctaattcataaaaactcatagcccatggataaagaaaaaccgtttc 51930 Query: 124 cacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtaccca 183 |||||||||| ||| ||||| | ||||| |||| || || || | ||||||| ||| Sbjct: 51931 aacatcaaaaataacgaaaactaaagcaaagctatagtaacggatctgaaattgtatcca 51990 Query: 184 agcccctcccatgggttctatacccgattcataactagaaagcttctctggtccttcact 243 ||| | ||||| ||||||||||| ||||||||||| | | || || ||||| | ||| Sbjct: 51991 agcatcccccattggttctatacctgattcataactggtcattttttcaggtcccttact 52050 Query: 244 aaccggggctaaaagccctgaaatc 268 |||||| |||||||| | ||||||| Sbjct: 52051 aaccggtgctaaaagtcgtgaaatc 52075
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 63.9 bits (32), Expect = 7e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 97 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 156 |||||| || || ||||| || ||||| |||||||||| ||| ||||| || |||||||| Sbjct: 316694 tgcccatggataaagaaatactgtttcaacatcaaaaataacgaaaactagggcaaacat 316753 Query: 157 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 216 |||||||| || ||||| | |||||||||||| |||||||| || || |||||||| Sbjct: 316754 gtaatagcgaatattaaattgaatccaagcccctccaatgggttccatcccagattcata 316813
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 |||||||||||||| || || ||||||| | |||||| |||| |||||||||||||| Sbjct: 37855 gcaaacatataataacgaatctggaattggatccaagcgtctccaatgggttctatacct 37796 Query: 209 gattcataactagaaagcttctctggtcctt 239 |||||||| || | || ||| |||||||||| Sbjct: 37795 gattcatagcttgtaaacttttctggtcctt 37765
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 139 aaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcccatggg 198 |||||| || |||||||| ||||||| |||||||||| ||||||||| | ||||| || Sbjct: 51110 aaaaactagagcaaacatttaatagcaaattcggaattttacccaagcatcccccattgg 51169 Query: 199 ttctatacccgattcataactag 221 ||| |||| ||||||||||||| Sbjct: 51170 ctctctacctgattcataactag 51192 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 298 tattattagaaatgtccaaaaaatatcatattcgtaaagcagaaacataa 347 |||||||| ||||| ||| |||| ||||||||||| || ||||||||||| Sbjct: 51264 tattattataaatgcccagaaaagatcatattcgtgaaacagaaacataa 51313
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 54.0 bits (27), Expect = 7e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 119 gtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgt 178 ||||| |||||||||| |||||||| | |||||||||||||| || ||| |||| ||| Sbjct: 37563 gtttctacatcaaaaatcacaaaaactaaagcaaacatataataacgaatttggaactgt 37622 Query: 179 acccaagcccctcccatgggttctatacccgattcataa 217 | ||||| ||||||| ||||| || || ||||||||| Sbjct: 37623 atccaagattctcccattggttcaattcctgattcataa 37661
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 97 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 156 ||||||||| |||||||| | ||||| |||||||| |||||||| || || |||||||| Sbjct: 59941 tgcccaaggatatagaaacaaagtttcgacatcaaatacaacaaatactagtgcaaacat 60000 Query: 157 ata 159 ||| Sbjct: 60001 ata 60003
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.042 Identities = 30/32 (93%) Strand = Plus / Plus Query: 619 ttcactttgtctcgctttctctagaatctcta 650 ||||||||||||| ||||||||||||||||| Sbjct: 8142738 ttcactttgtctcattttctctagaatctcta 8142769
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 48.1 bits (24), Expect = 0.042 Identities = 30/32 (93%) Strand = Plus / Plus Query: 619 ttcactttgtctcgctttctctagaatctcta 650 ||||||||||||| ||||||||||||||||| Sbjct: 130931 ttcactttgtctcattttctctagaatctcta 130962
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 48.1 bits (24), Expect = 0.042 Identities = 30/32 (93%) Strand = Plus / Minus Query: 619 ttcactttgtctcgctttctctagaatctcta 650 ||||||||||||| ||||||||||||||||| Sbjct: 159820 ttcactttgtctcattttctctagaatctcta 159789
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 48.1 bits (24), Expect = 0.042 Identities = 30/32 (93%) Strand = Plus / Minus Query: 619 ttcactttgtctcgctttctctagaatctcta 650 ||||||||||||| ||||||||||||||||| Sbjct: 43934 ttcactttgtctcattttctctagaatctcta 43903
>gb|BT011769.1| Arabidopsis thaliana At1g45904 mRNA, complete cds Length = 728 Score = 46.1 bits (23), Expect = 0.17 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | | || ||||||||| ||||| |||||||| ||||| ||| Sbjct: 290 tgcataaactaaaccaaggattaggataagcacaaaaatgaaagcttctgtaaaagtgga 231 Query: 73 tacacccaatacgtcgaaactca 95 ||| |||||||| || ||||||| Sbjct: 230 tac-cccaatacatctaaactca 209
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 46.1 bits (23), Expect = 0.17 Identities = 80/99 (80%) Strand = Plus / Plus Query: 119 gtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgt 178 ||||| |||||||||| ||||||| | |||||||||||||| ||||| |||||| Sbjct: 58063 gtttctacatcaaaaattacaaaaattaaagcaaacatataataacgtatgttgaattgg 58122 Query: 179 acccaagcccctcccatgggttctatacccgattcataa 217 |||||||| | ||||| ||||| || || ||||||||| Sbjct: 58123 acccaagcttcacccattggttcaattcctgattcataa 58161
>gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G19 genomic sequence, complete sequence Length = 133379 Score = 46.1 bits (23), Expect = 0.17 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | | || ||||||||| ||||| |||||||| ||||| ||| Sbjct: 30551 tgcataaactaaaccaaggattaggataagcacaaaaatgaaagcttctgtaaaagtgga 30610 Query: 73 tacacccaatacgtcgaaactca 95 ||| |||||||| || ||||||| Sbjct: 30611 tac-cccaatacatctaaactca 30632
>emb|AL645926.16| Zebrafish DNA sequence from clone RP71-1G24, complete sequence Length = 141213 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Plus Query: 604 agaaaactttatcgtttcacttt 626 ||||||||||||||||||||||| Sbjct: 10933 agaaaactttatcgtttcacttt 10955
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 46.1 bits (23), Expect = 0.17 Identities = 47/55 (85%) Strand = Plus / Minus Query: 125 acatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||||||||| |||||||| || |||||||||||||| || ||| | ||||||| Sbjct: 58525 acatcaaaaataacaaaaaatagagcaaacatataataacggatttgaaattgta 58471
>gb|AY853472.1| Marsupenaeus japonicus isolate ZJ27 control region, partial sequence; mitochondrial Length = 504 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 675 tatttactatttaataataata 696 |||||||||||||||||||||| Sbjct: 47 tatttactatttaataataata 26
>gb|AY853469.1| Marsupenaeus japonicus isolate TW11 control region, partial sequence; mitochondrial Length = 504 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 675 tatttactatttaataataata 696 |||||||||||||||||||||| Sbjct: 47 tatttactatttaataataata 26
>gb|AY853467.1| Marsupenaeus japonicus isolate TW7 control region, partial sequence; mitochondrial Length = 505 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 675 tatttactatttaataataata 696 |||||||||||||||||||||| Sbjct: 47 tatttactatttaataataata 26
>gb|AY853460.1| Marsupenaeus japonicus isolate HK6 control region, partial sequence; mitochondrial Length = 505 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 675 tatttactatttaataataata 696 |||||||||||||||||||||| Sbjct: 47 tatttactatttaataataata 26
>gb|AY853456.1| Marsupenaeus japonicus isolate CB6 control region, partial sequence; mitochondrial Length = 504 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 675 tatttactatttaataataata 696 |||||||||||||||||||||| Sbjct: 47 tatttactatttaataataata 26
>gb|AY853453.1| Marsupenaeus japonicus isolate CA10 control region, partial sequence; mitochondrial Length = 505 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 675 tatttactatttaataataata 696 |||||||||||||||||||||| Sbjct: 47 tatttactatttaataataata 26
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 443617 tagcgtattcggaattgtaaccaagc 443642 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 362504 tagcgtattcggaattgtaaccaagc 362529 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 443543 aaacggaaacgcccaatacatcgaaactcattaccca 443579 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 362430 aaacggaaacgcccaatacatcgaaactcattaccca 362466
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 442775 tagcgtattcggaattgtaaccaagc 442800 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 361677 tagcgtattcggaattgtaaccaagc 361702 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 442701 aaacggaaacgcccaatacatcgaaactcattaccca 442737 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 361603 aaacggaaacgcccaatacatcgaaactcattaccca 361639
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 442771 tagcgtattcggaattgtaaccaagc 442796 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 361673 tagcgtattcggaattgtaaccaagc 361698 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 442697 aaacggaaacgcccaatacatcgaaactcattaccca 442733 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 361599 aaacggaaacgcccaatacatcgaaactcattaccca 361635
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 44.1 bits (22), Expect = 0.66 Identities = 46/54 (85%) Strand = Plus / Minus Query: 112 aaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 165 |||||| || ||||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 1491650 aaagaccgtctccacatcaaaaatgacaaagacgagggcaaacatgtagtagcg 1491597
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Minus Query: 705 ttaaataaaaatgagaatactactaa 730 |||||||||||||||||||| ||||| Sbjct: 2577229 ttaaataaaaatgagaatacaactaa 2577204
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Plus Query: 125 acatcaaaaacaacaaaaacgagcgcaaacatataata 162 |||||||||| ||||||||| | |||||||||||||| Sbjct: 47135 acatcaaaaataacaaaaactaaagcaaacatataata 47172
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 442628 tagcgtattcggaattgtaaccaagc 442653 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 361541 tagcgtattcggaattgtaaccaagc 361566 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 442554 aaacggaaacgcccaatacatcgaaactcattaccca 442590 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 361467 aaacggaaacgcccaatacatcgaaactcattaccca 361503
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 agaatcttttttgttcaaaca 467 ||||||||||||||||||||| Sbjct: 116091 agaatcttttttgttcaaaca 116111
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 2.6 Identities = 57/69 (82%) Strand = Plus / Minus Query: 97 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 156 ||||||||| |||| || || || ||||||||||| || ||||| || || |||||||| Sbjct: 2312630 tgcccaaggatataagaacacagtctccacatcaaagacgacaaagaccagggcaaacat 2312571 Query: 157 ataatagcg 165 ||| ||||| Sbjct: 2312570 atagtagcg 2312562
>emb|CR932579.1|CNS0KYB9 Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 549 ttttggatttccattctattt 569 ||||||||||||||||||||| Sbjct: 1847 ttttggatttccattctattt 1827
>gb|AY120853.2| Synechococcus sp. PCC 7942 processing protease-like protein gene, partial cds; phycocyanobilin:ferredoxin oxidoreductase-like protein, DevB (devB), DevC (devC), tRNA pseudoridine 55 synthase, CheY (cheY), 50S ribosomal protein L27, 50S ribosomal protein L21, KaiA (kaiA), KaiB (kaiB), KaiC (kaiC), glutathione peroxidase, virulence associated protein C, rRNA methylase-like protein, PhdD (phdD), indole-3-glycerol phosphate synthase-like protein, PdxJ (pdxJ), KguA (kguA), AmpA (ampA), MobA (mobA), transferrin variant A-like protein, 6-pyruvoyl-tetrahydropterin synthase-like protein, NugC (nugC), NdhK (ndhK), Nu3C (nu3C), RubR (rubR), PsbE (psbE), PsbF (psbF), PsbL (psbL), PsbJ (psbJ), apolipoprotein N-acyltransferase-like protein, unknown protein, IspF (ispF), Ap-4-A phosphorylase II-like protein, PanC (panC), Kcy (kcy), and dTDP-glucose 4-6-dehydratase-like protein genes, complete cds; and unknown genes Length = 74355 Score = 42.1 bits (21), Expect = 2.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 113 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 165 ||||||||||| |||||||| | || || |||||||||||||| || ||||| Sbjct: 35711 aagacggtttctacatcaaagatcacgaatacgagcgcaaacatgtagtagcg 35763
>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold Length = 574594 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 590 taattcttatataaagaaaac 610 ||||||||||||||||||||| Sbjct: 345781 taattcttatataaagaaaac 345801
>emb|AJ884786.1| Gigaspora margarita transposon GmarRT1-like sequence, clone GmarRT1-d Length = 769 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 caatttatccagaacttctct 428 ||||||||||||||||||||| Sbjct: 521 caatttatccagaacttctct 541
>emb|AJ884784.1| Gigaspora margarita transposon GmarRT1-like sequence, clone GmarRT1b Length = 752 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 caatttatccagaacttctct 428 ||||||||||||||||||||| Sbjct: 521 caatttatccagaacttctct 541
>emb|CR847884.6| Zebrafish DNA sequence from clone CH211-161H23 in linkage group 1, complete sequence Length = 157311 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 440 tgaaacaagaatcttttttgttcaaacaa 468 |||||||| ||||||||||||||| |||| Sbjct: 74418 tgaaacaaaaatcttttttgttcatacaa 74390
>gb|AC149804.11| Medicago truncatula clone mth2-73h22, complete sequence Length = 121763 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 595 cttatataaagaaaactttat 615 ||||||||||||||||||||| Sbjct: 48652 cttatataaagaaaactttat 48672
>emb|AJ012181.1|AVA012181 Anabaena variabilis hoxR gene and ndhCKJ gene cluster Length = 3020 Score = 42.1 bits (21), Expect = 2.6 Identities = 57/69 (82%) Strand = Plus / Minus Query: 97 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 156 ||||||||| |||| || || || ||||||||||| || ||||| || || |||||||| Sbjct: 1347 tgcccaaggatataagaacacagtctccacatcaaagacgacaaagaccagggcaaacat 1288 Query: 157 ataatagcg 165 ||| ||||| Sbjct: 1287 atagtagcg 1279
>emb|BX908805.1| Human DNA sequence from clone RP11-526F14 on chromosome 1 Contains part of the DPYD gene for dihydropyrimidine dehydrogenase and the 3' end of a novel gene, complete sequence Length = 59492 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 409 aatttatccagaacttctctctttt 433 |||||||||||||||||||| |||| Sbjct: 51481 aatttatccagaacttctctttttt 51457
>emb|AL512385.10| Human DNA sequence from clone RP11-252E3 on chromosome 6 Contains part of the gene KIAA0319 and a keratin 8 (KRT8) pseudogene, complete sequence Length = 28692 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 385 tagtcaattcaattcagcatt 405 ||||||||||||||||||||| Sbjct: 11478 tagtcaattcaattcagcatt 11498
>gb|AC083928.11| Homo sapiens chromosome 8, clone RP11-77C4, complete sequence Length = 144023 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 707 aaataaaaatgagaatactactaat 731 |||||||||||||||||||| |||| Sbjct: 33692 aaataaaaatgagaatactaataat 33716
>emb|CR942205.4| Human DNA sequence from clone RP11-948M1 on chromosome 6, complete sequence Length = 176819 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 tagtcaattcaattcagcatt 405 ||||||||||||||||||||| Sbjct: 93954 tagtcaattcaattcagcatt 93934
>emb|CR925830.3| Human DNA sequence from clone RP11-195J19 on chromosome 6, complete sequence Length = 167847 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 tagtcaattcaattcagcatt 405 ||||||||||||||||||||| Sbjct: 99979 tagtcaattcaattcagcatt 99959
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 42.1 bits (21), Expect = 2.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 113 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 165 ||||||||||| |||||||| | || || |||||||||||||| || ||||| Sbjct: 408832 aagacggtttctacatcaaagatcacgaatacgagcgcaaacatgtagtagcg 408884
>gb|AC079178.20| Homo sapiens Xp BAC RP11-702C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114665 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 684 tttaataataataagagacta 704 ||||||||||||||||||||| Sbjct: 111304 tttaataataataagagacta 111324
>gb|AC021393.10| Homo sapiens chromosome 8, clone RP11-27P7, complete sequence Length = 150858 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 300 ttattagaaatgtccaaaaaatatcatat 328 ||||||| |||||||| |||||||||||| Sbjct: 30476 ttattagtaatgtccataaaatatcatat 30448
>gb|BC068355.1| Danio rerio zgc:85677, mRNA (cDNA clone MGC:85677 IMAGE:6961081), complete cds Length = 2201 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cacatcaaaaacaacaaaaac 144 ||||||||||||||||||||| Sbjct: 1550 cacatcaaaaacaacaaaaac 1530
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 acatcaaaaacaacaaaaacg 145 ||||||||||||||||||||| Sbjct: 5414380 acatcaaaaacaacaaaaacg 5414400 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 acatcaaaaacaacaaaaacg 145 ||||||||||||||||||||| Sbjct: 5414354 acatcaaaaacaacaaaaacg 5414374 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 acatcaaaaacaacaaaaacg 145 ||||||||||||||||||||| Sbjct: 5414328 acatcaaaaacaacaaaaacg 5414348
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 agaatcttttttgttcaaaca 467 ||||||||||||||||||||| Sbjct: 1160480 agaatcttttttgttcaaaca 1160500
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 78261 aaacggaaacgcccaatacatcgaaactcattaccca 78297
>emb|BX571798.5| Zebrafish DNA sequence from clone DKEY-199I24 in linkage group 18, complete sequence Length = 108129 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 684 tttaataataataagagacta 704 ||||||||||||||||||||| Sbjct: 64143 tttaataataataagagacta 64123
>emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, complete sequence Length = 168383 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 673 tttatttactatttaataataataa 697 |||||||| |||||||||||||||| Sbjct: 90976 tttatttattatttaataataataa 90952
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 tttccacatcaaaaacaacaa 140 ||||||||||||||||||||| Sbjct: 4865735 tttccacatcaaaaacaacaa 4865755
>emb|CT476832.2| Pig DNA sequence from clone XX-BE284E13 on chromosome 11, complete sequence Length = 180778 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 686 taataataataagagactattaaat 710 |||||||||||| |||||||||||| Sbjct: 60489 taataataataaaagactattaaat 60465
>emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb0001P17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151024 Score = 42.1 bits (21), Expect = 2.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 382 aattagtcaattcaattcagcattgtcaatttatccagaacttctctcttttc 434 ||||| ||||||||| ||| || ||||||||||| || || |||| ||||||| Sbjct: 148763 aattaatcaattcaagtcaacactgtcaatttatacataagttctatcttttc 148711
>emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146055 Score = 42.1 bits (21), Expect = 2.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 382 aattagtcaattcaattcagcattgtcaatttatccagaacttctctcttttc 434 ||||| ||||||||| ||| || ||||||||||| || || |||| ||||||| Sbjct: 60359 aattaatcaattcaagtcaacactgtcaatttatacataagttctatcttttc 60307
>emb|AL513424.3|HS109M15 Homo sapiens chromosome 9 BAC RP11-109M15, complete sequence Length = 184365 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 attcagcattgtcaatttatc 416 ||||||||||||||||||||| Sbjct: 126091 attcagcattgtcaatttatc 126071
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 gctgcatcttctttaaagatt 521 ||||||||||||||||||||| Sbjct: 14531 gctgcatcttctttaaagatt 14551
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 agaatcttttttgttcaaaca 467 ||||||||||||||||||||| Sbjct: 10766 agaatcttttttgttcaaaca 10786
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 42.1 bits (21), Expect = 2.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 113 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 165 ||||||||||| |||||||| | || || |||||||||||||| || ||||| Sbjct: 1211974 aagacggtttctacatcaaagatcacgaatacgagcgcaaacatgtagtagcg 1211922
>dbj|D13112.1|RICMT16 Oryza sativa (japonica cultivar-group) mitochondrial gene for tRNAs, complete sequences Length = 4894 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 4758 aaacggaaacgcccaatacatcgaaactcattaccca 4794 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,034,310 Number of Sequences: 3902068 Number of extensions: 11034310 Number of successful extensions: 247749 Number of sequences better than 10.0: 147 Number of HSP's better than 10.0 without gapping: 152 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 245714 Number of HSP's gapped (non-prelim): 1907 length of query: 747 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 724 effective length of database: 17,143,297,704 effective search space: 12411747537696 effective search space used: 12411747537696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
