ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13n22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branche... 543 e-151
2emb|AJ622895.1| Triticum durum partial mRNA for DRP3 protein (dr... 135 1e-28
3ref|XM_470612.1| Oryza sativa (japonica cultivar-group), predic... 88 2e-14
4dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
5dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 1e-12
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
8gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome... 82 1e-12
9gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 82 1e-12
10gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, co... 42 1.2
11emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, compl... 42 1.2
12gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, co... 42 1.2
13gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, com... 42 1.2
14gb|AC053479.8| Homo sapiens chromosome 8, clone RP11-782A18, com... 42 1.2
15gb|AC091010.5| Homo sapiens chromosome 8, clone RP11-680F23, com... 42 1.2
16gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete s... 42 1.2
17gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, compl... 42 1.2
18gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H1... 40 4.6
19gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 4.6
20gb|AC146447.3| Pan troglodytes BAC clone RP43-4N6 from 7, comple... 40 4.6
21ref|NM_001032492.1| Ciona intestinalis alcohol dehydrogenase cla... 40 4.6
22gb|AC006966.3| Homo sapiens PAC clone RP4-563H24 from 7, complet... 40 4.6
23gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 4.6
24emb|AL049565.3|HS751D22 Human DNA sequence from clone RP4-751D22... 40 4.6
25emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M1... 40 4.6
26emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on ch... 40 4.6
27emb|CR749163.11| Zebrafish DNA sequence from clone CH211-216B21 ... 40 4.6
28gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 ma... 40 4.6
29gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete g... 40 4.6
30gb|AF344173.1| Ciona intestinalis alcohol dehydrogenase class 3 ... 40 4.6
31gb|AF344172.1| Ciona intestinalis alcohol dehydrogenase class 3 ... 40 4.6
32gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, compl... 40 4.6
33gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosom... 40 4.6
34gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complet... 40 4.6
35emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in ... 40 4.6
36gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome... 40 4.6
37emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in... 40 4.6
38gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Canc... 40 4.6
39gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, co... 40 4.6
40gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 ... 40 4.6
41dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 4.6
42gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, co... 40 4.6 
>emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branched-chain amino acid
            aminotransferase, exons 1-7
          Length = 4318

 Score =  543 bits (274), Expect = e-151
 Identities = 274/274 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gcccaaatttgaagccgctgatgaccggggcacgtaactttcaaattctagcgcgagata 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4193 gcccaaatttgaagccgctgatgaccggggcacgtaactttcaaattctagcgcgagata 4134

                                                                        
Query: 61   tgatcaccatgataattattcacatttgcaaagataatactaaaacaatactggatgctt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4133 tgatcaccatgataattattcacatttgcaaagataatactaaaacaatactggatgctt 4074

                                                                        
Query: 121  ctggcgctgcatgcgcccatgctcttttcctaatcaatcaatcaatcgctaccgtccatc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4073 ctggcgctgcatgcgcccatgctcttttcctaatcaatcaatcaatcgctaccgtccatc 4014

                                                                        
Query: 181  ctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaatttcctcg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4013 ctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaatttcctcg 3954

                                              
Query: 241  acaacgtgtcttccccagtcctgaactcgtgcct 274
            ||||||||||||||||||||||||||||||||||
Sbjct: 3953 acaacgtgtcttccccagtcctgaactcgtgcct 3920



 Score =  155 bits (78), Expect = 1e-34
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                        
Query: 272  ccttgtcccttggtaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3818 ccttgtcccttggtaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 3759

                              
Query: 332  gaacacttcgtctgcgcc 349
            ||||||||||||||||||
Sbjct: 3758 gaacacttcgtctgcgcc 3741
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>emb|AJ622895.1| Triticum durum partial mRNA for DRP3 protein (drg3 gene)
          Length = 469

 Score =  135 bits (68), Expect = 1e-28
 Identities = 71/72 (98%)
 Strand = Plus / Minus

                                                                       
Query: 272 ccttgtcccttggtaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 331
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 469 ccttgtcccttggtaggtgatggtggacaccggggtgacgccgacggccgttcccgtgca 410

                       
Query: 332 gaacacttcgtc 343
           ||||||||||||
Sbjct: 409 gaacacttcgtc 398
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>ref|XM_470612.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1248

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 143/176 (81%)
 Strand = Plus / Minus

                                                                        
Query: 174  gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 233
            |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 1232 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 1173

                                                                        
Query: 234  ttcctcgacaacgtgtcttccccagtcctgaactcgtgccttgtcccttggtaggtgatg 293
             ||  ||| |||||||| |  |||||||||||||||| ||||  ||| ||||| || |  
Sbjct: 1172 gtctgcgataacgtgtcatgtccagtcctgaactcgtacctttgcccatggtaagtaaca 1113

                                                                    
Query: 294  gtcgacaccggggtgacgccgacggccgttcccgtgcagaacacttcgtctgcgcc 349
             |||| || ||||  ||| | || || ||||| ||||||||||| |||||||||||
Sbjct: 1112 ctcgatactggggcaacgaccaccgctgttccggtgcagaacacctcgtctgcgcc 1057
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>dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135J09, full
            insert sequence
          Length = 1738

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 143/176 (81%)
 Strand = Plus / Minus

                                                                        
Query: 174  gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 233
            |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 1352 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 1293

                                                                        
Query: 234  ttcctcgacaacgtgtcttccccagtcctgaactcgtgccttgtcccttggtaggtgatg 293
             ||  ||| |||||||| |  |||||||||||||||| ||||  ||| ||||| || |  
Sbjct: 1292 gtctgcgataacgtgtcatgtccagtcctgaactcgtacctttgcccatggtaagtaaca 1233

                                                                    
Query: 294  gtcgacaccggggtgacgccgacggccgttcccgtgcagaacacttcgtctgcgcc 349
             |||| || ||||  ||| | || || ||||| ||||||||||| |||||||||||
Sbjct: 1232 ctcgatactggggcaacgaccaccgctgttccggtgcagaacacctcgtctgcgcc 1177
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>dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E04, full
            insert sequence
          Length = 1577

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 143/176 (81%)
 Strand = Plus / Minus

                                                                        
Query: 174  gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 233
            |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 1347 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 1288

                                                                        
Query: 234  ttcctcgacaacgtgtcttccccagtcctgaactcgtgccttgtcccttggtaggtgatg 293
             ||  ||| |||||||| |  |||||||||||||||| ||||  ||| ||||| || |  
Sbjct: 1287 gtctgcgataacgtgtcatgtccagtcctgaactcgtacctttgcccatggtaagtaaca 1228

                                                                    
Query: 294  gtcgacaccggggtgacgccgacggccgttcccgtgcagaacacttcgtctgcgcc 349
             |||| || ||||  ||| | || || ||||| ||||||||||| |||||||||||
Sbjct: 1227 ctcgatactggggcaacgaccaccgctgttccggtgcagaacacctcgtctgcgcc 1172
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                           
Query: 174     gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 233
               |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 6920162 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 6920103

                                                    
Query: 234     ttcctcgacaacgtgtcttccccagtcctgaactcgt 270
                ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 6920102 gtctgcgataacgtgtcatgtccagtcctgaactcgt 6920066



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 321     gttcccgtgcagaacacttcgtctgcgcc 349
               ||||| ||||||||||| |||||||||||
Sbjct: 6919915 gttccggtgcagaacacctcgtctgcgcc 6919887
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                           
Query: 174     gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 233
               |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 6918057 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 6917998

                                                    
Query: 234     ttcctcgacaacgtgtcttccccagtcctgaactcgt 270
                ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 6917997 gtctgcgataacgtgtcatgtccagtcctgaactcgt 6917961



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 321     gttcccgtgcagaacacttcgtctgcgcc 349
               ||||| ||||||||||| |||||||||||
Sbjct: 6917810 gttccggtgcagaacacctcgtctgcgcc 6917782
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>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12,
              complete sequence
          Length = 120392

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                          
Query: 174    gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 233
              |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 116095 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 116036

                                                   
Query: 234    ttcctcgacaacgtgtcttccccagtcctgaactcgt 270
               ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 116035 gtctgcgataacgtgtcatgtccagtcctgaactcgt 115999



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 321    gttcccgtgcagaacacttcgtctgcgcc 349
              ||||| ||||||||||| |||||||||||
Sbjct: 115848 gttccggtgcagaacacctcgtctgcgcc 115820
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>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
             complete sequence
          Length = 166072

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                         
Query: 174   gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 233
             |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 86759 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 86700

                                                  
Query: 234   ttcctcgacaacgtgtcttccccagtcctgaactcgt 270
              ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 86699 gtctgcgataacgtgtcatgtccagtcctgaactcgt 86663



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 321   gttcccgtgcagaacacttcgtctgcgcc 349
             ||||| ||||||||||| |||||||||||
Sbjct: 86512 gttccggtgcagaacacctcgtctgcgcc 86484
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>gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, complete sequence
          Length = 170606

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 273    cttgtcccttggtaggtgatg 293
              |||||||||||||||||||||
Sbjct: 145103 cttgtcccttggtaggtgatg 145083
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>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence
          Length = 191674

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    ttcctaatcaatcaatcaatc 167
              |||||||||||||||||||||
Sbjct: 139485 ttcctaatcaatcaatcaatc 139465
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>gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, complete sequence
          Length = 222905

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 273    cttgtcccttggtaggtgatg 293
              |||||||||||||||||||||
Sbjct: 218890 cttgtcccttggtaggtgatg 218910
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>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence
          Length = 189532

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    ttcacatttgcaaagataata 99
             |||||||||||||||||||||
Sbjct: 19225 ttcacatttgcaaagataata 19245
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>gb|AC053479.8| Homo sapiens chromosome 8, clone RP11-782A18, complete sequence
          Length = 133053

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 275    tgtcccttggtaggtgatggt 295
              |||||||||||||||||||||
Sbjct: 105733 tgtcccttggtaggtgatggt 105753
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>gb|AC091010.5| Homo sapiens chromosome 8, clone RP11-680F23, complete sequence
          Length = 186881

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 275  tgtcccttggtaggtgatggt 295
            |||||||||||||||||||||
Sbjct: 8331 tgtcccttggtaggtgatggt 8351
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>gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete sequence
          Length = 186752

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    ttcacatttgcaaagataata 99
             |||||||||||||||||||||
Sbjct: 80468 ttcacatttgcaaagataata 80448
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>gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, complete sequence
          Length = 169622

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 79   ttcacatttgcaaagataata 99
            |||||||||||||||||||||
Sbjct: 3228 ttcacatttgcaaagataata 3208
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>gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H13, complete sequence
          Length = 160498

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   aatcaatcaatcaatcgcta 171
             ||||||||||||||||||||
Sbjct: 28809 aatcaatcaatcaatcgcta 28828
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>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    aatcaatcaatcaatcgcta 171
              ||||||||||||||||||||
Sbjct: 645138 aatcaatcaatcaatcgcta 645157
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>gb|AC146447.3| Pan troglodytes BAC clone RP43-4N6 from 7, complete sequence
          Length = 200529

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   tcttttcctaatcaatcaatcaat 166
             |||||||||||||||| |||||||
Sbjct: 33695 tcttttcctaatcaatgaatcaat 33718
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>ref|NM_001032492.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3), mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 tttcttgtcctctgccagcc 201
           ||||||||||||||||||||
Sbjct: 992 tttcttgtcctctgccagcc 973
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>gb|AC006966.3| Homo sapiens PAC clone RP4-563H24 from 7, complete sequence
          Length = 101215

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 143   tcttttcctaatcaatcaatcaat 166
             |||||||||||||||| |||||||
Sbjct: 29235 tcttttcctaatcaatgaatcaat 29212
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 147     ttcctaatcaatcaatcaat 166
               ||||||||||||||||||||
Sbjct: 1678262 ttcctaatcaatcaatcaat 1678281
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>emb|AL049565.3|HS751D22 Human DNA sequence from clone RP4-751D22 on chromosome Xq25-26.3,
             complete sequence
          Length = 85538

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   ctcttttcctaatcaatcaa 161
             ||||||||||||||||||||
Sbjct: 54297 ctcttttcctaatcaatcaa 54316
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>emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M15 on chromosome 20q12-13.12
             Contains the PPIAL gene for peptidylprolyl isomerase A
             (cyclophilin A)-like pseudogene, the 5' end of the PTPRT
             gene for protein tyrosine phosphatase receptor type T, a
             novel gene and two CpG Islands, complete sequence
          Length = 177562

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 67    ccatgataattattcacatttgca 90
             |||||||||| |||||||||||||
Sbjct: 54868 ccatgataataattcacatttgca 54891
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>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the
              5' end of Ntn1 gene for netrin 1, three genes for a novel
              proteins (F730038I15Rik), the 3' end of a novel gene
              (4930535C22Rik) and two CpG islands, complete sequence
          Length = 221455

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    tcctaatcaatcaatcaatc 167
              ||||||||||||||||||||
Sbjct: 212251 tcctaatcaatcaatcaatc 212270
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>emb|CR749163.11| Zebrafish DNA sequence from clone CH211-216B21 in linkage group 5,
             complete sequence
          Length = 189369

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    atactaaaacaatactggat 116
             ||||||||||||||||||||
Sbjct: 68759 atactaaaacaatactggat 68740
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>gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 map CIC06E08, complete
             sequence
          Length = 99359

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   tttcctaatcaatcaatcaa 165
             ||||||||||||||||||||
Sbjct: 45507 tttcctaatcaatcaatcaa 45526
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>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome
          Length = 135611

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 222   gtcgtgtacaatttcctcgacaac 245
             ||||||||||||||| ||||||||
Sbjct: 78558 gtcgtgtacaatttcgtcgacaac 78581
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>gb|AF344173.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3) gene,
            complete cds
          Length = 3890

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  tttcttgtcctctgccagcc 201
            ||||||||||||||||||||
Sbjct: 2428 tttcttgtcctctgccagcc 2409
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>gb|AF344172.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3) mRNA,
           complete cds
          Length = 1407

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 tttcttgtcctctgccagcc 201
           ||||||||||||||||||||
Sbjct: 992 tttcttgtcctctgccagcc 973
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>gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, complete sequence
          Length = 238472

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  ctaaaacaatactggatgct 119
            ||||||||||||||||||||
Sbjct: 6707 ctaaaacaatactggatgct 6726
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>gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosome 14, complete sequence
          Length = 152012

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     aatactaaaacaatactgga 115
              ||||||||||||||||||||
Sbjct: 137920 aatactaaaacaatactgga 137939
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>gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complete sequence
          Length = 168448

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    tcctctgccagccccatctg 208
              ||||||||||||||||||||
Sbjct: 133506 tcctctgccagccccatctg 133487
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>emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in linkage group 19,
             complete sequence
          Length = 181789

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   cttttcctaatcaatcaatcaatc 167
             |||||| |||||||||||||||||
Sbjct: 15128 cttttcttaatcaatcaatcaatc 15151
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>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence
          Length = 199716

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    aatactaaaacaatactgga 115
             ||||||||||||||||||||
Sbjct: 10547 aatactaaaacaatactgga 10566
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>emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in linkage group 19,
             complete sequence
          Length = 179116

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   cttttcctaatcaatcaatcaatc 167
             ||||||| ||||||||||||||||
Sbjct: 89955 cttttccaaatcaatcaatcaatc 89978
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>gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152586

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    tcctctgccagccccatctg 208
              ||||||||||||||||||||
Sbjct: 129010 tcctctgccagccccatctg 129029
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>gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, complete sequence
          Length = 182058

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    tcctaatcaatcaatcaatc 167
              ||||||||||||||||||||
Sbjct: 138815 tcctaatcaatcaatcaatc 138834
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>gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 map 4p16, complete sequence
          Length = 189805

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 152  aatcaatcaatcaatcgcta 171
            ||||||||||||||||||||
Sbjct: 7916 aatcaatcaatcaatcgcta 7897
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>dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-507F16, complete
              sequence
          Length = 188040

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    ctaaaacaatactggatgct 119
              ||||||||||||||||||||
Sbjct: 115388 ctaaaacaatactggatgct 115407
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>gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, complete sequence
          Length = 153019

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   gatggtcgacaccggggtga 309
             ||||||||||||||||||||
Sbjct: 53157 gatggtcgacaccggggtga 53138


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,806,160
Number of Sequences: 3902068
Number of extensions: 2806160
Number of successful extensions: 132216
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131974
Number of HSP's gapped (non-prelim): 242
length of query: 349
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 327
effective length of database: 17,147,199,772
effective search space: 5607134325444
effective search space used: 5607134325444
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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