ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13n21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branche... 573 e-160
2emb|AJ622895.1| Triticum durum partial mRNA for DRP3 protein (dr... 432 e-118
3ref|XM_470612.1| Oryza sativa (japonica cultivar-group), predic... 260 5e-66
4dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 5e-66
5dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 5e-66
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 139 1e-29
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
8gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
9gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
10gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, co... 42 2.1
11gb|AF547699.1| Lysimachia heterogenea internal transcribed space... 42 2.1
12emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, compl... 42 2.1
13gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, co... 42 2.1
14gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, com... 42 2.1
15gb|AC053479.8| Homo sapiens chromosome 8, clone RP11-782A18, com... 42 2.1
16gb|AC091010.5| Homo sapiens chromosome 8, clone RP11-680F23, com... 42 2.1
17gb|AF335476.1| Leishmania tropica ABCA1.2 transporter gene, part... 42 2.1
18gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete s... 42 2.1
19gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, compl... 42 2.1
20gb|AC135720.8| Mus musculus chromosome 15, clone RP24-298F20, co... 40 8.4
21gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H1... 40 8.4
22gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 8.4
23gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 8.4
24gb|AC146447.3| Pan troglodytes BAC clone RP43-4N6 from 7, comple... 40 8.4
25gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 8.4
26ref|NM_001032492.1| Ciona intestinalis alcohol dehydrogenase cla... 40 8.4
27gb|AC006966.3| Homo sapiens PAC clone RP4-563H24 from 7, complet... 40 8.4
28gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom... 40 8.4
29ref|XM_750819.1| Aspergillus fumigatus Af293 hypothetical protei... 40 8.4
30gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 8.4
31emb|AL049565.3|HS751D22 Human DNA sequence from clone RP4-751D22... 40 8.4
32emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M1... 40 8.4
33gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genom... 40 8.4
34emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.4
35emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on ch... 40 8.4
36emb|CR749163.11| Zebrafish DNA sequence from clone CH211-216B21 ... 40 8.4
37gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 8.4
38gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 ma... 40 8.4
39gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete g... 40 8.4
40gb|AF344173.1| Ciona intestinalis alcohol dehydrogenase class 3 ... 40 8.4
41gb|AF344172.1| Ciona intestinalis alcohol dehydrogenase class 3 ... 40 8.4
42gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, compl... 40 8.4
43gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 8.4
44gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosom... 40 8.4
45gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complet... 40 8.4
46emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in ... 40 8.4
47gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome... 40 8.4
48emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 8.4
49emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in... 40 8.4
50gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Canc... 40 8.4
51gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, co... 40 8.4
52gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 ... 40 8.4
53dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.4
54gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, co... 40 8.4 
>emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branched-chain amino acid
            aminotransferase, exons 1-7
          Length = 4318

 Score =  573 bits (289), Expect = e-160
 Identities = 289/289 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcgatttctttccgtgcccaaatttgaagccgctgatgaccggggcacgtaactttcaaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4208 tcgatttctttccgtgcccaaatttgaagccgctgatgaccggggcacgtaactttcaaa 4149

                                                                        
Query: 61   ttctagcgcgagatatgatcaccatgataattattcacatttgcaaagataatactaaaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4148 ttctagcgcgagatatgatcaccatgataattattcacatttgcaaagataatactaaaa 4089

                                                                        
Query: 121  caatactggatgcttctggcgctgcatgcgcccatgctcttttcctaatcaatcaatcaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4088 caatactggatgcttctggcgctgcatgcgcccatgctcttttcctaatcaatcaatcaa 4029

                                                                        
Query: 181  tcgctaccgtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4028 tcgctaccgtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcg 3969

                                                             
Query: 241  tgtacaatttcctcgacaacgtgtcttccccagtcctgaactcgtgcct 289
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3968 tgtacaatttcctcgacaacgtgtcttccccagtcctgaactcgtgcct 3920



 Score =  385 bits (194), Expect = e-103
 Identities = 215/218 (98%), Gaps = 3/218 (1%)
 Strand = Plus / Minus

                                                                        
Query: 396  tcgacctggtagccgtcatccctggcgagctcgatgatgctcctgcgcgtgacacccggc 455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3612 tcgacctggtagccgtcatccctggcgagctcgatgatgctcctgcgcgtgacacccggc 3553

                                                                        
Query: 456  aggatggtccctgcccgtcgtcgcccggcgtcgcgacggcgccgcccttgacgacgaaga 515
            ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3552 aggatggtccctgcc-gtcgtcgcc-ggcgtcgcgacggcgccgcccttgacgacgaaga 3495

                                                                        
Query: 516  ggttgcaggaggaggcctccttcgacgtacctcttgtggaccgcgtccaggtacagcacg 575
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3494 ggttgcaggaggaggcctcct-cgacgtacctcttgtggaccgcgtccaggtacagcacg 3436

                                                  
Query: 576  tccgcgaaccccttgcttttcgcgtccatctgcggctt 613
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 3435 tccgcgaaccccttgcttttcgcgtccatctgcggctt 3398



 Score =  232 bits (117), Expect = 1e-57
 Identities = 117/117 (100%)
 Strand = Plus / Minus

                                                                        
Query: 287  ccttgtcccttggtaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3818 ccttgtcccttggtaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 3759

                                                                     
Query: 347  gaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctcttcgacctg 403
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3758 gaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctcttcgacctg 3702
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>emb|AJ622895.1| Triticum durum partial mRNA for DRP3 protein (drg3 gene)
          Length = 469

 Score =  432 bits (218), Expect = e-118
 Identities = 299/323 (92%), Gaps = 6/323 (1%)
 Strand = Plus / Minus

                                                                       
Query: 287 ccttgtcccttggtaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 346
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 469 ccttgtcccttggtaggtgatggtggacaccggggtgacgccgacggccgttcccgtgca 410

                                                                       
Query: 347 gaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctcttcgacctggta 406
           |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaacacttcgtcggcactgacgagatcgtcgatggagacgaggcgctcttcgacctggta 350

                                                                       
Query: 407 gccgtcatccctggcgagctcgatgatgctcctgcgcgtgacacccggcaggatggtccc 466
           ||||   || ||||||||||||||||||||||  |||||||| |||||||||||||||||
Sbjct: 349 gccgctgtctctggcgagctcgatgatgctccgacgcgtgacccccggcaggatggtccc 290

                                                                       
Query: 467 tgcccgtcgtcgcccggcgtcgcgacggcgccgcccttgacgacgaagaggttgcaggag 526
              ||||||    ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 289 -ctccgtcg----ccggcgtcgcgacggcgccgcccttcacgacgaagaggttgcaggag 235

                                                                       
Query: 527 gaggcctccttcgacgtacctcttgtggaccgcgtccaggtacagcacgtccgcgaaccc 586
           ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 234 gaggcctcc-tccacgtacctcttgtggaccgagtccaggtacagcacgtccgcgaaccc 176

                                  
Query: 587 cttgcttttcgcgtccatctgcg 609
           ||||||  |||||||||||||||
Sbjct: 175 cttgctcctcgcgtccatctgcg 153
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>ref|XM_470612.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1248

 Score =  260 bits (131), Expect = 5e-66
 Identities = 352/421 (83%), Gaps = 6/421 (1%)
 Strand = Plus / Minus

                                                                        
Query: 189  gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 248
            |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 1232 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 1173

                                                                        
Query: 249  ttcctcgacaacgtgtcttccccagtcctgaactcgtgccttgtcccttggtaggtgatg 308
             ||  ||| |||||||| |  |||||||||||||||| ||||  ||| ||||| || |  
Sbjct: 1172 gtctgcgataacgtgtcatgtccagtcctgaactcgtacctttgcccatggtaagtaaca 1113

                                                                        
Query: 309  gtcgacaccggggtgacgccgacggccgttcccgtgcagaacacttcgtctgcgccgacg 368
             |||| || ||||  ||| | || || ||||| ||||||||||| |||||||||||||| 
Sbjct: 1112 ctcgatactggggcaacgaccaccgctgttccggtgcagaacacctcgtctgcgccgacc 1053

                                                                        
Query: 369  agatcgtcgatggagacgaggcgctcttcgacctggtagccgtcatccctggcgagctcg 428
            |||||||||||||||||||| || ||||| ||||| ||||||   |||||||||||||||
Sbjct: 1052 agatcgtcgatggagacgagccgttcttcaacctgatagccgcggtccctggcgagctcg 993

                                                                        
Query: 429  atgatgctcctgcgcgtgacacccggcaggatggtccctgcccgtcgtcgcccggcgtcg 488
            |||| |||| |||||||||  |||||||||||||| ||  | ||  || || |||||| |
Sbjct: 992  atgacgctcttgcgcgtgatccccggcaggatggttcc--cacg--gtggc-cggcgtgg 938

                                                                        
Query: 489  cgacggcgccgcccttgacgacgaagaggttgcaggaggaggcctccttcgacgtacctc 548
            ||||| ||||| ||||||||| ||||||||||||||||||||||||| || | |||| ||
Sbjct: 937  cgacgacgccgtccttgacgatgaagaggttgcaggaggaggcctcc-tccaggtacgtc 879

                                                                        
Query: 549  ttgtggaccgcgtccaggtacagcacgtccgcgaaccccttgcttttcgcgtccatctgc 608
            ||||| |||||||| |||||||||||||| | ||||||  |||| || ||||||||||||
Sbjct: 878  ttgtgcaccgcgtcgaggtacagcacgtcagtgaaccctctgctcttggcgtccatctgc 819

             
Query: 609  g 609
            |
Sbjct: 818  g 818
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>dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135J09, full
            insert sequence
          Length = 1738

 Score =  260 bits (131), Expect = 5e-66
 Identities = 352/421 (83%), Gaps = 6/421 (1%)
 Strand = Plus / Minus

                                                                        
Query: 189  gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 248
            |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 1352 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 1293

                                                                        
Query: 249  ttcctcgacaacgtgtcttccccagtcctgaactcgtgccttgtcccttggtaggtgatg 308
             ||  ||| |||||||| |  |||||||||||||||| ||||  ||| ||||| || |  
Sbjct: 1292 gtctgcgataacgtgtcatgtccagtcctgaactcgtacctttgcccatggtaagtaaca 1233

                                                                        
Query: 309  gtcgacaccggggtgacgccgacggccgttcccgtgcagaacacttcgtctgcgccgacg 368
             |||| || ||||  ||| | || || ||||| ||||||||||| |||||||||||||| 
Sbjct: 1232 ctcgatactggggcaacgaccaccgctgttccggtgcagaacacctcgtctgcgccgacc 1173

                                                                        
Query: 369  agatcgtcgatggagacgaggcgctcttcgacctggtagccgtcatccctggcgagctcg 428
            |||||||||||||||||||| || ||||| ||||| ||||||   |||||||||||||||
Sbjct: 1172 agatcgtcgatggagacgagccgttcttcaacctgatagccgcggtccctggcgagctcg 1113

                                                                        
Query: 429  atgatgctcctgcgcgtgacacccggcaggatggtccctgcccgtcgtcgcccggcgtcg 488
            |||| |||| |||||||||  |||||||||||||| ||  | ||  || || |||||| |
Sbjct: 1112 atgacgctcttgcgcgtgatccccggcaggatggttcc--cacg--gtggc-cggcgtgg 1058

                                                                        
Query: 489  cgacggcgccgcccttgacgacgaagaggttgcaggaggaggcctccttcgacgtacctc 548
            ||||| ||||| ||||||||| ||||||||||||||||||||||||| || | |||| ||
Sbjct: 1057 cgacgacgccgtccttgacgatgaagaggttgcaggaggaggcctcc-tccaggtacgtc 999

                                                                        
Query: 549  ttgtggaccgcgtccaggtacagcacgtccgcgaaccccttgcttttcgcgtccatctgc 608
            ||||| |||||||| |||||||||||||| | ||||||  |||| || ||||||||||||
Sbjct: 998  ttgtgcaccgcgtcgaggtacagcacgtcagtgaaccctctgctcttggcgtccatctgc 939

             
Query: 609  g 609
            |
Sbjct: 938  g 938
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>dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E04, full
            insert sequence
          Length = 1577

 Score =  260 bits (131), Expect = 5e-66
 Identities = 352/421 (83%), Gaps = 6/421 (1%)
 Strand = Plus / Minus

                                                                        
Query: 189  gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 248
            |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 1347 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 1288

                                                                        
Query: 249  ttcctcgacaacgtgtcttccccagtcctgaactcgtgccttgtcccttggtaggtgatg 308
             ||  ||| |||||||| |  |||||||||||||||| ||||  ||| ||||| || |  
Sbjct: 1287 gtctgcgataacgtgtcatgtccagtcctgaactcgtacctttgcccatggtaagtaaca 1228

                                                                        
Query: 309  gtcgacaccggggtgacgccgacggccgttcccgtgcagaacacttcgtctgcgccgacg 368
             |||| || ||||  ||| | || || ||||| ||||||||||| |||||||||||||| 
Sbjct: 1227 ctcgatactggggcaacgaccaccgctgttccggtgcagaacacctcgtctgcgccgacc 1168

                                                                        
Query: 369  agatcgtcgatggagacgaggcgctcttcgacctggtagccgtcatccctggcgagctcg 428
            |||||||||||||||||||| || ||||| ||||| ||||||   |||||||||||||||
Sbjct: 1167 agatcgtcgatggagacgagccgttcttcaacctgatagccgcggtccctggcgagctcg 1108

                                                                        
Query: 429  atgatgctcctgcgcgtgacacccggcaggatggtccctgcccgtcgtcgcccggcgtcg 488
            |||| |||| |||||||||  |||||||||||||| ||  | ||  || || |||||| |
Sbjct: 1107 atgacgctcttgcgcgtgatccccggcaggatggttcc--cacg--gtggc-cggcgtgg 1053

                                                                        
Query: 489  cgacggcgccgcccttgacgacgaagaggttgcaggaggaggcctccttcgacgtacctc 548
            ||||| ||||| ||||||||| ||||||||||||||||||||||||| || | |||| ||
Sbjct: 1052 cgacgacgccgtccttgacgatgaagaggttgcaggaggaggcctcc-tccaggtacgtc 994

                                                                        
Query: 549  ttgtggaccgcgtccaggtacagcacgtccgcgaaccccttgcttttcgcgtccatctgc 608
            ||||| |||||||| |||||||||||||| | ||||||  |||| || ||||||||||||
Sbjct: 993  ttgtgcaccgcgtcgaggtacagcacgtcagtgaaccctctgctcttggcgtccatctgc 934

             
Query: 609  g 609
            |
Sbjct: 933  g 933
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  139 bits (70), Expect = 1e-29
 Identities = 168/196 (85%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                           
Query: 414     tccctggcgagctcgatgatgctcctgcgcgtgacacccggcaggatggtccctgcccgt 473
               ||||||||||||||||||| |||| |||||||||  |||||||||||||| ||  | || 
Sbjct: 6919685 tccctggcgagctcgatgacgctcttgcgcgtgatccccggcaggatggttcc--cacg- 6919629

                                                                           
Query: 474     cgtcgcccggcgtcgcgacggcgccgcccttgacgacgaagaggttgcaggaggaggcct 533
                || || |||||| |||||| ||||| ||||||||| |||||||||||||||||||||||
Sbjct: 6919628 -gtggc-cggcgtggcgacgacgccgtccttgacgatgaagaggttgcaggaggaggcct 6919571

                                                                           
Query: 534     ccttcgacgtacctcttgtggaccgcgtccaggtacagcacgtccgcgaaccccttgctt 593
               || || | |||| ||||||| |||||||| |||||||||||||| | ||||||  |||| 
Sbjct: 6919570 cc-tccaggtacgtcttgtgcaccgcgtcgaggtacagcacgtcagtgaaccctctgctc 6919512

                               
Query: 594     ttcgcgtccatctgcg 609
               || |||||||||||||
Sbjct: 6919511 ttggcgtccatctgcg 6919496



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                           
Query: 336     gttcccgtgcagaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctct 395
               ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| || |||
Sbjct: 6919915 gttccggtgcagaacacctcgtctgcgccgaccagatcgtcgatggagacgagccgttct 6919856

                       
Query: 396     tcgacctg 403
               || |||||
Sbjct: 6919855 tcaacctg 6919848



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                           
Query: 189     gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 248
               |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 6920162 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 6920103

                                                    
Query: 249     ttcctcgacaacgtgtcttccccagtcctgaactcgt 285
                ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 6920102 gtctgcgataacgtgtcatgtccagtcctgaactcgt 6920066



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 468      gcccgtcgtcgcccggcgtc 487
                ||||||||||||||||||||
Sbjct: 31473019 gcccgtcgtcgcccggcgtc 31473038
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  139 bits (70), Expect = 1e-29
 Identities = 168/196 (85%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                           
Query: 414     tccctggcgagctcgatgatgctcctgcgcgtgacacccggcaggatggtccctgcccgt 473
               ||||||||||||||||||| |||| |||||||||  |||||||||||||| ||  | || 
Sbjct: 6917580 tccctggcgagctcgatgacgctcttgcgcgtgatccccggcaggatggttcc--cacg- 6917524

                                                                           
Query: 474     cgtcgcccggcgtcgcgacggcgccgcccttgacgacgaagaggttgcaggaggaggcct 533
                || || |||||| |||||| ||||| ||||||||| |||||||||||||||||||||||
Sbjct: 6917523 -gtggc-cggcgtggcgacgacgccgtccttgacgatgaagaggttgcaggaggaggcct 6917466

                                                                           
Query: 534     ccttcgacgtacctcttgtggaccgcgtccaggtacagcacgtccgcgaaccccttgctt 593
               || || | |||| ||||||| |||||||| |||||||||||||| | ||||||  |||| 
Sbjct: 6917465 cc-tccaggtacgtcttgtgcaccgcgtcgaggtacagcacgtcagtgaaccctctgctc 6917407

                               
Query: 594     ttcgcgtccatctgcg 609
               || |||||||||||||
Sbjct: 6917406 ttggcgtccatctgcg 6917391



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                           
Query: 336     gttcccgtgcagaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctct 395
               ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| || |||
Sbjct: 6917810 gttccggtgcagaacacctcgtctgcgccgaccagatcgtcgatggagacgagccgttct 6917751

                       
Query: 396     tcgacctg 403
               || |||||
Sbjct: 6917750 tcaacctg 6917743



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                           
Query: 189     gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 248
               |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 6918057 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 6917998

                                                    
Query: 249     ttcctcgacaacgtgtcttccccagtcctgaactcgt 285
                ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 6917997 gtctgcgataacgtgtcatgtccagtcctgaactcgt 6917961



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 468      gcccgtcgtcgcccggcgtc 487
                ||||||||||||||||||||
Sbjct: 31563535 gcccgtcgtcgcccggcgtc 31563554
to top
>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12,
              complete sequence
          Length = 120392

 Score =  139 bits (70), Expect = 1e-29
 Identities = 168/196 (85%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                          
Query: 414    tccctggcgagctcgatgatgctcctgcgcgtgacacccggcaggatggtccctgcccgt 473
              ||||||||||||||||||| |||| |||||||||  |||||||||||||| ||  | || 
Sbjct: 115618 tccctggcgagctcgatgacgctcttgcgcgtgatccccggcaggatggttcc--cacg- 115562

                                                                          
Query: 474    cgtcgcccggcgtcgcgacggcgccgcccttgacgacgaagaggttgcaggaggaggcct 533
               || || |||||| |||||| ||||| ||||||||| |||||||||||||||||||||||
Sbjct: 115561 -gtggc-cggcgtggcgacgacgccgtccttgacgatgaagaggttgcaggaggaggcct 115504

                                                                          
Query: 534    ccttcgacgtacctcttgtggaccgcgtccaggtacagcacgtccgcgaaccccttgctt 593
              || || | |||| ||||||| |||||||| |||||||||||||| | ||||||  |||| 
Sbjct: 115503 cc-tccaggtacgtcttgtgcaccgcgtcgaggtacagcacgtcagtgaaccctctgctc 115445

                              
Query: 594    ttcgcgtccatctgcg 609
              || |||||||||||||
Sbjct: 115444 ttggcgtccatctgcg 115429



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                          
Query: 336    gttcccgtgcagaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctct 395
              ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| || |||
Sbjct: 115848 gttccggtgcagaacacctcgtctgcgccgaccagatcgtcgatggagacgagccgttct 115789

                      
Query: 396    tcgacctg 403
              || |||||
Sbjct: 115788 tcaacctg 115781



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                          
Query: 189    gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 248
              |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 116095 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 116036

                                                   
Query: 249    ttcctcgacaacgtgtcttccccagtcctgaactcgt 285
               ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 116035 gtctgcgataacgtgtcatgtccagtcctgaactcgt 115999
to top
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
             complete sequence
          Length = 166072

 Score =  139 bits (70), Expect = 1e-29
 Identities = 168/196 (85%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                         
Query: 414   tccctggcgagctcgatgatgctcctgcgcgtgacacccggcaggatggtccctgcccgt 473
             ||||||||||||||||||| |||| |||||||||  |||||||||||||| ||  | || 
Sbjct: 86282 tccctggcgagctcgatgacgctcttgcgcgtgatccccggcaggatggttcc--cacg- 86226

                                                                         
Query: 474   cgtcgcccggcgtcgcgacggcgccgcccttgacgacgaagaggttgcaggaggaggcct 533
              || || |||||| |||||| ||||| ||||||||| |||||||||||||||||||||||
Sbjct: 86225 -gtggc-cggcgtggcgacgacgccgtccttgacgatgaagaggttgcaggaggaggcct 86168

                                                                         
Query: 534   ccttcgacgtacctcttgtggaccgcgtccaggtacagcacgtccgcgaaccccttgctt 593
             || || | |||| ||||||| |||||||| |||||||||||||| | ||||||  |||| 
Sbjct: 86167 cc-tccaggtacgtcttgtgcaccgcgtcgaggtacagcacgtcagtgaaccctctgctc 86109

                             
Query: 594   ttcgcgtccatctgcg 609
             || |||||||||||||
Sbjct: 86108 ttggcgtccatctgcg 86093



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 336   gttcccgtgcagaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctct 395
             ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| || |||
Sbjct: 86512 gttccggtgcagaacacctcgtctgcgccgaccagatcgtcgatggagacgagccgttct 86453

                     
Query: 396   tcgacctg 403
             || |||||
Sbjct: 86452 tcaacctg 86445



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                         
Query: 189   gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 248
             |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 86759 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 86700

                                                  
Query: 249   ttcctcgacaacgtgtcttccccagtcctgaactcgt 285
              ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 86699 gtctgcgataacgtgtcatgtccagtcctgaactcgt 86663
to top
>gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, complete sequence
          Length = 170606

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 288    cttgtcccttggtaggtgatg 308
              |||||||||||||||||||||
Sbjct: 145103 cttgtcccttggtaggtgatg 145083
to top
>gb|AF547699.1| Lysimachia heterogenea internal transcribed spacer 1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer 2,
           complete sequence
          Length = 620

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 372 tcgtcgatggagacgaggcgc 392
           |||||||||||||||||||||
Sbjct: 577 tcgtcgatggagacgaggcgc 557
to top
>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence
          Length = 191674

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 162    ttcctaatcaatcaatcaatc 182
              |||||||||||||||||||||
Sbjct: 139485 ttcctaatcaatcaatcaatc 139465
to top
>gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, complete sequence
          Length = 222905

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 288    cttgtcccttggtaggtgatg 308
              |||||||||||||||||||||
Sbjct: 218890 cttgtcccttggtaggtgatg 218910
to top
>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence
          Length = 189532

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    ttcacatttgcaaagataata 114
             |||||||||||||||||||||
Sbjct: 19225 ttcacatttgcaaagataata 19245
to top
>gb|AC053479.8| Homo sapiens chromosome 8, clone RP11-782A18, complete sequence
          Length = 133053

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 290    tgtcccttggtaggtgatggt 310
              |||||||||||||||||||||
Sbjct: 105733 tgtcccttggtaggtgatggt 105753
to top
>gb|AC091010.5| Homo sapiens chromosome 8, clone RP11-680F23, complete sequence
          Length = 186881

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 290  tgtcccttggtaggtgatggt 310
            |||||||||||||||||||||
Sbjct: 8331 tgtcccttggtaggtgatggt 8351
to top
>gb|AF335476.1| Leishmania tropica ABCA1.2 transporter gene, partial cds
          Length = 5688

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 553  ggaccgcgtccaggtacagca 573
            |||||||||||||||||||||
Sbjct: 2026 ggaccgcgtccaggtacagca 2006
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>gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete sequence
          Length = 186752

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 94    ttcacatttgcaaagataata 114
             |||||||||||||||||||||
Sbjct: 80468 ttcacatttgcaaagataata 80448
to top
>gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, complete sequence
          Length = 169622

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 94   ttcacatttgcaaagataata 114
            |||||||||||||||||||||
Sbjct: 3228 ttcacatttgcaaagataata 3208
to top
>gb|AC135720.8| Mus musculus chromosome 15, clone RP24-298F20, complete sequence
          Length = 156107

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    aagaggttgcaggaggaggc 531
              ||||||||||||||||||||
Sbjct: 105671 aagaggttgcaggaggaggc 105652
to top
>gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H13, complete sequence
          Length = 160498

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   aatcaatcaatcaatcgcta 186
             ||||||||||||||||||||
Sbjct: 28809 aatcaatcaatcaatcgcta 28828
to top
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    aatcaatcaatcaatcgcta 186
              ||||||||||||||||||||
Sbjct: 645138 aatcaatcaatcaatcgcta 645157
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 483     gcgtcgcgacggcgccgccc 502
               ||||||||||||||||||||
Sbjct: 1754345 gcgtcgcgacggcgccgccc 1754326
to top
>gb|AC146447.3| Pan troglodytes BAC clone RP43-4N6 from 7, complete sequence
          Length = 200529

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 158   tcttttcctaatcaatcaatcaat 181
             |||||||||||||||| |||||||
Sbjct: 33695 tcttttcctaatcaatgaatcaat 33718
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 474     cgtcgcccggcgtcgcgacg 493
               ||||||||||||||||||||
Sbjct: 1279847 cgtcgcccggcgtcgcgacg 1279866
to top
>ref|NM_001032492.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3), mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 tttcttgtcctctgccagcc 216
           ||||||||||||||||||||
Sbjct: 992 tttcttgtcctctgccagcc 973
to top
>gb|AC006966.3| Homo sapiens PAC clone RP4-563H24 from 7, complete sequence
          Length = 101215

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 158   tcttttcctaatcaatcaatcaat 181
             |||||||||||||||| |||||||
Sbjct: 29235 tcttttcctaatcaatgaatcaat 29212
to top
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
              sequence
          Length = 133449

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 468    gcccgtcgtcgcccggcgtc 487
              ||||||||||||||||||||
Sbjct: 119577 gcccgtcgtcgcccggcgtc 119558
to top
>ref|XM_750819.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g15770)
           partial mRNA
          Length = 1305

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 507 cgacgaagaggttgcaggag 526
           ||||||||||||||||||||
Sbjct: 570 cgacgaagaggttgcaggag 589
to top
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 162     ttcctaatcaatcaatcaat 181
               ||||||||||||||||||||
Sbjct: 1678262 ttcctaatcaatcaatcaat 1678281
to top
>emb|AL049565.3|HS751D22 Human DNA sequence from clone RP4-751D22 on chromosome Xq25-26.3,
             complete sequence
          Length = 85538

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   ctcttttcctaatcaatcaa 176
             ||||||||||||||||||||
Sbjct: 54297 ctcttttcctaatcaatcaa 54316
to top
>emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M15 on chromosome 20q12-13.12
             Contains the PPIAL gene for peptidylprolyl isomerase A
             (cyclophilin A)-like pseudogene, the 5' end of the PTPRT
             gene for protein tyrosine phosphatase receptor type T, a
             novel gene and two CpG Islands, complete sequence
          Length = 177562

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    ccatgataattattcacatttgca 105
             |||||||||| |||||||||||||
Sbjct: 54868 ccatgataataattcacatttgca 54891
to top
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete
             sequence
          Length = 159091

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   gcccgtcgtcgcccggcgtc 487
             ||||||||||||||||||||
Sbjct: 22781 gcccgtcgtcgcccggcgtc 22762
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 483     gcgtcgcgacggcgccgccc 502
               ||||||||||||||||||||
Sbjct: 3089238 gcgtcgcgacggcgccgccc 3089219
to top
>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the
              5' end of Ntn1 gene for netrin 1, three genes for a novel
              proteins (F730038I15Rik), the 3' end of a novel gene
              (4930535C22Rik) and two CpG islands, complete sequence
          Length = 221455

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    tcctaatcaatcaatcaatc 182
              ||||||||||||||||||||
Sbjct: 212251 tcctaatcaatcaatcaatc 212270
to top
>emb|CR749163.11| Zebrafish DNA sequence from clone CH211-216B21 in linkage group 5,
             complete sequence
          Length = 189369

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   atactaaaacaatactggat 131
             ||||||||||||||||||||
Sbjct: 68759 atactaaaacaatactggat 68740
to top
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    cgacggcgccgcccttgacg 508
              ||||||||||||||||||||
Sbjct: 600857 cgacggcgccgcccttgacg 600876
to top
>gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 map CIC06E08, complete
             sequence
          Length = 99359

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tttcctaatcaatcaatcaa 180
             ||||||||||||||||||||
Sbjct: 45507 tttcctaatcaatcaatcaa 45526
to top
>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome
          Length = 135611

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 237   gtcgtgtacaatttcctcgacaac 260
             ||||||||||||||| ||||||||
Sbjct: 78558 gtcgtgtacaatttcgtcgacaac 78581
to top
>gb|AF344173.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3) gene,
            complete cds
          Length = 3890

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  tttcttgtcctctgccagcc 216
            ||||||||||||||||||||
Sbjct: 2428 tttcttgtcctctgccagcc 2409
to top
>gb|AF344172.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3) mRNA,
           complete cds
          Length = 1407

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 tttcttgtcctctgccagcc 216
           ||||||||||||||||||||
Sbjct: 992 tttcttgtcctctgccagcc 973
to top
>gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, complete sequence
          Length = 238472

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  ctaaaacaatactggatgct 134
            ||||||||||||||||||||
Sbjct: 6707 ctaaaacaatactggatgct 6726
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 483     gcgtcgcgacggcgccgccc 502
               ||||||||||||||||||||
Sbjct: 2237864 gcgtcgcgacggcgccgccc 2237845
to top
>gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosome 14, complete sequence
          Length = 152012

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    aatactaaaacaatactgga 130
              ||||||||||||||||||||
Sbjct: 137920 aatactaaaacaatactgga 137939
to top
>gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complete sequence
          Length = 168448

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    tcctctgccagccccatctg 223
              ||||||||||||||||||||
Sbjct: 133506 tcctctgccagccccatctg 133487
to top
>emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in linkage group 19,
             complete sequence
          Length = 181789

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 159   cttttcctaatcaatcaatcaatc 182
             |||||| |||||||||||||||||
Sbjct: 15128 cttttcttaatcaatcaatcaatc 15151
to top
>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence
          Length = 199716

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   aatactaaaacaatactgga 130
             ||||||||||||||||||||
Sbjct: 10547 aatactaaaacaatactgga 10566
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 480     ccggcgtcgcgacggcgccg 499
               ||||||||||||||||||||
Sbjct: 1275007 ccggcgtcgcgacggcgccg 1274988
to top
>emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in linkage group 19,
             complete sequence
          Length = 179116

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 159   cttttcctaatcaatcaatcaatc 182
             ||||||| ||||||||||||||||
Sbjct: 89955 cttttccaaatcaatcaatcaatc 89978
to top
>gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152586

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    tcctctgccagccccatctg 223
              ||||||||||||||||||||
Sbjct: 129010 tcctctgccagccccatctg 129029
to top
>gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, complete sequence
          Length = 182058

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    tcctaatcaatcaatcaatc 182
              ||||||||||||||||||||
Sbjct: 138815 tcctaatcaatcaatcaatc 138834
to top
>gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 map 4p16, complete sequence
          Length = 189805

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  aatcaatcaatcaatcgcta 186
            ||||||||||||||||||||
Sbjct: 7916 aatcaatcaatcaatcgcta 7897
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>dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-507F16, complete
              sequence
          Length = 188040

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    ctaaaacaatactggatgct 134
              ||||||||||||||||||||
Sbjct: 115388 ctaaaacaatactggatgct 115407
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>gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, complete sequence
          Length = 153019

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   gatggtcgacaccggggtga 324
             ||||||||||||||||||||
Sbjct: 53157 gatggtcgacaccggggtga 53138


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,447,129
Number of Sequences: 3902068
Number of extensions: 4447129
Number of successful extensions: 160522
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 159574
Number of HSP's gapped (non-prelim): 938
length of query: 614
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 591
effective length of database: 17,143,297,704
effective search space: 10131688943064
effective search space used: 10131688943064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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