ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13n15 |
|---|---|
| Clone Library Name | barley_pub |
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 100 bits (250), Expect = 2e-21 Identities = 41/59 (69%), Positives = 51/59 (86%) Frame = -2 Query: 535 NRCSTCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKL 359 NRCS CRKRVGLTGF CRCG+++C HRYSD+H C +DY++AARDAIA+ NPVV+A K+ Sbjct: 103 NRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 97.1 bits (240), Expect = 3e-20 Identities = 40/62 (64%), Positives = 49/62 (79%) Frame = -2 Query: 535 NRCSTCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLD 356 NRC CRK+VGLTGF+CRCGN++C LHRYSDKH+C +DY+ A I K NPVV AEK+ Sbjct: 152 NRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQ 211 Query: 355 KI 350 +I Sbjct: 212 RI 213
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 97.1 bits (240), Expect = 3e-20 Identities = 40/62 (64%), Positives = 49/62 (79%) Frame = -2 Query: 535 NRCSTCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLD 356 NRC CRK+VGLTGF+CRCGN++C LHRYSDKH+C +DY+ A I K NPVV AEK+ Sbjct: 152 NRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQ 211 Query: 355 KI 350 +I Sbjct: 212 RI 213
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 96.7 bits (239), Expect = 4e-20 Identities = 38/61 (62%), Positives = 51/61 (83%) Frame = -2 Query: 532 RCSTCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDK 353 RC +C K+VG+TGF CRCG+ +C HRY + H+CQFD++ AR+AIAKANPVVKA+K+D+ Sbjct: 108 RCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDR 167 Query: 352 I 350 I Sbjct: 168 I 168
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 94.7 bits (234), Expect = 1e-19 Identities = 40/63 (63%), Positives = 48/63 (76%) Frame = -2 Query: 538 PNRCSTCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKL 359 PNRC+ CRKRVGLTGF CRCG +C HRY + H C FD+++A R+ IAKANP+V A KL Sbjct: 99 PNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKL 158 Query: 358 DKI 350 KI Sbjct: 159 QKI 161
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 92.0 bits (227), Expect = 9e-19 Identities = 35/62 (56%), Positives = 49/62 (79%) Frame = -2 Query: 535 NRCSTCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLD 356 NRC +C K+VG+ GF C+CG+ +C HRY +KH+C FD++ RDAIAKANP+VKA+K+ Sbjct: 114 NRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQ 173 Query: 355 KI 350 +I Sbjct: 174 RI 175
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 46.6 bits (109), Expect = 4e-05 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Frame = -2 Query: 532 RCSTCRKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEK 362 RC C+ ++ L +CRCG ++C LHR ++HDC FD+ R+ ++K K Sbjct: 156 RCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVK 210 Query: 361 LDK 353 LD+ Sbjct: 211 LDR 213
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 46.6 bits (109), Expect = 4e-05 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Frame = -2 Query: 532 RCSTCRKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEK 362 RC C+ ++ L +CRCG ++C LHR ++HDC FD+ R+ ++K K Sbjct: 156 RCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVK 210 Query: 361 LDK 353 LD+ Sbjct: 211 LDR 213
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 46.6 bits (109), Expect = 4e-05 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Frame = -2 Query: 532 RCSTCRKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEK 362 RC C+ ++ L +CRCG ++C LHR ++HDC FD+ R+ ++K K Sbjct: 156 RCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVK 210 Query: 361 LDK 353 LD+ Sbjct: 211 LDR 213
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 45.8 bits (107), Expect = 8e-05 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Frame = -2 Query: 532 RCSTCRKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEK 362 RC C+ ++ L +CRCG ++C LHR ++HDC FD+ R+ ++K K Sbjct: 155 RCFRCQIKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVK 209 Query: 361 LDK 353 LD+ Sbjct: 210 LDR 212
>ZFN2B_RAT (Q4KLG9) AN1-type zinc finger protein 2B| Length = 257 Score = 32.7 bits (73), Expect = 0.67 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -2 Query: 535 NRC--STCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 392 N+C S CR+R + RCG +C HR+ HDC + +R +A Sbjct: 98 NKCERSGCRQREMMKLTCDRCGRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147
>NORQ_PARDE (Q51664) Protein norQ| Length = 270 Score = 31.6 bits (70), Expect = 1.5 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -1 Query: 362 ARQDLGVL-QGRNGCNLPRFIIHLCCAILAPPFLVGCH 252 A DL VL +G GC RF+ H+ + P + V CH Sbjct: 32 AANDLPVLLKGPTGCGKTRFVAHMAARLGRPLYTVACH 69
>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B| Length = 257 Score = 31.2 bits (69), Expect = 1.9 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -2 Query: 535 NRC--STCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 392 N+C S CR+R + RCG +C HR+ H+C + +R +A Sbjct: 98 NKCERSGCRQREMMKLTCDRCGRNFCIKHRHPLDHECSGEGHQTSRAGLA 147
>CO9_MOUSE (P06683) Complement component C9 precursor| Length = 548 Score = 30.0 bits (66), Expect = 4.3 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = -2 Query: 532 RCST--CRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAK 389 +C T C KR L + CG+ YSD++DC D RT RD +A+ Sbjct: 104 QCETGRCIKRRLLCNGDNDCGD-------YSDENDCDDDPRTPCRDRVAE 146
>HM14_CAEEL (P20271) Homeobox protein ceh-14| Length = 351 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -2 Query: 532 RCSTCRKRVGLTGFNCRCGNMYCSLHRY 449 RCSTC+ +G T F R +MYC H Y Sbjct: 74 RCSTCKDELGATCF-LREDSMYCRAHFY 100
>VG40_ICHV1 (Q00145) Hypothetical gene 40 protein| Length = 136 Score = 29.6 bits (65), Expect = 5.6 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -3 Query: 366 RSSTRFRCPTGKKWLQSAKVHHPSLLCHPCTSLSCWLPHFLNCTAS*CTLRRGS 205 RS++ F C + L ++ PS+ CT+ SCW H L +++ +RR S Sbjct: 26 RSNSWFVCKIVYRCLSPRRIISPSI----CTAFSCWANHGLRLSST-AAMRRSS 74
>DGK1_DROME (Q01583) Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase| 1) (DGK 1) (DAG kinase 1) Length = 1020 Score = 29.6 bits (65), Expect = 5.6 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Frame = -2 Query: 532 RCSTCRKRV----GLTGFNCR-CGNMYCSLHRYSDKHDC 431 RCS CRKR+ G+TG CR C M + S K +C Sbjct: 269 RCSKCRKRIKAYHGITGLTCRWCHMMLHNRCASSVKKEC 307
>ALG2_CANGA (Q6FJJ9) Alpha-1,3-mannosyltransferase ALG2 (EC 2.4.1.-)| (GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase) (Asparagine-linked glycosylation protein 2) Length = 458 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = -2 Query: 484 RCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI--*VSYREEMVAICQ 311 +C N Y S++RY K + + + A+ ++ N VV +I V Y +E+ +C+ Sbjct: 215 KCPNFYLSINRYERKKNIELAIQAFAKASVENTNLVVCGGYDPRIHENVQYLQELTCLCK 274
>YVDC_LACLA (Q9CE03) Hypothetical UPF0177 protein yvdC| Length = 261 Score = 29.6 bits (65), Expect = 5.6 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 14/100 (14%) Frame = -2 Query: 367 EKLDKI*VSYREEMVAICQGSSSIFAVPSLHLPFLLAATFPKLYGIVM--HTASWQLQEL 194 EKL + YR +V I S +V HLPFL+ A + G++ H + W + L Sbjct: 5 EKLQSL-AKYRWVIVIILALLFSALSVSIFHLPFLMTALVLSIVGLIFAYHKSVWLV--L 61 Query: 193 NPLSHSEWFACCV------------TLFMVVFSVSIVASH 110 LS+ A + +F ++F ++I++S+ Sbjct: 62 FILSNLPMLATTIFAYQHHFTTLDTVIFFIIFLLTIISSY 101
>PA2X_BUNFA (P14411) Phospholipase A2 isozyme X, basic (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 29.3 bits (64), Expect = 7.4 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%) Frame = +3 Query: 201 CSCHDAVCITM---PYNLGNVAANKKGRCK 281 C C A I PYNL N NKK CK Sbjct: 89 CDCDRAAAICFAAAPYNLSNFGINKKTHCK 118
>IL17E_HUMAN (Q9H293) Interleukin-17E precursor (IL-17E) (Interleukin-25)| (IL-25) Length = 177 Score = 29.3 bits (64), Expect = 7.4 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = +1 Query: 319 LQPFLPCRTPKSCRASLPSPLG----WPWRW 399 L+P P R P+SCRAS PL PWR+ Sbjct: 62 LEPARPNRHPESCRASEDGPLNSRAISPWRY 92
>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1553 Score = 28.9 bits (63), Expect = 9.6 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 5/38 (13%) Frame = -3 Query: 174 NGLRVV*LYSWWFFRSV-----LWLLILASSVYVLLSH 76 NG Y WWFF++V + LL++ + +YV SH Sbjct: 1176 NGSEFPQKYYWWFFQTVPGLTGVMLLLILAIMYVFASH 1213
>ZFN2B_HUMAN (Q8WV99) AN1-type zinc finger protein 2B| Length = 257 Score = 28.9 bits (63), Expect = 9.6 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = -2 Query: 535 NRCST--CRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 392 N+C CR+R + RC +C HR+ HDC + +R +A Sbjct: 98 NKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,351,578 Number of Sequences: 219361 Number of extensions: 1783887 Number of successful extensions: 5006 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5005 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
