ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cy... 210 3e-54
2MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (M... 154 2e-37
3MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cy... 154 2e-37
4MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cy... 142 1e-33
5MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cy... 142 1e-33
6MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) ... 139 7e-33
7MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling is... 136 8e-32
8MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast... 113 7e-25
9MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozy... 105 1e-22
10CAMA_PSEPU (P16640) Putidaredoxin reductase (EC 1.18.1.-) 40 0.006
11WSC2_YEAST (P53832) Cell wall integrity and stress response comp... 38 0.038
12TODA_PSEPU (P13452) Toluene 1,2-dioxygenase system ferredoxin--N... 38 0.038
13XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells h... 36 0.15
14BPHG_BURCE (P37337) Biphenyl dioxygenase system ferredoxin--NAD(... 36 0.15
15THCD_RHOER (P43494) Rhodocoxin reductase (EC 1.18.1.-) 35 0.19
16BEDA_PSEPU (Q07946) Benzene 1,2-dioxygenase system ferredoxin--N... 35 0.32
17CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-... 33 1.2
18LPLA_ECOL6 (Q8FA49) Lipoate-protein ligase A (EC 6.3.2.-) 32 1.6
19HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1) 32 1.6
20XPC_HUMAN (Q01831) DNA-repair protein complementing XP-C cells (... 32 2.1
21YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region 32 2.7
22YS89_CAEEL (Q09624) Hypothetical protein ZK945.9 32 2.7
23YMH1_CAEEL (P34468) Hypothetical protein F58A4.1 32 2.7
24TIG_STRMU (Q8CWZ6) Trigger factor (TF) 31 3.6
25PININ_BOVIN (P79122) Pinin 31 3.6
26CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Ca... 31 3.6
27TIR2_YEAST (P33890) Cold shock-induced protein TIR2 precursor (S... 31 4.7
28CHRD_HUMAN (Q9H2X0) Chordin precursor 31 4.7
29COBQ_METTH (O26880) Probable cobyric acid synthase 30 6.1
30PHC2_HUMAN (Q8IXK0) Polyhomeotic-like protein 2 (hPH2) (Early de... 30 6.1
31VE2_HPV05 (P06921) Regulatory protein E2 30 8.0

>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 2 (EC 1.6.5.4) (MDAR 2)
          Length = 488

 Score =  210 bits (535), Expect = 3e-54
 Identities = 105/196 (53%), Positives = 142/196 (72%), Gaps = 15/196 (7%)
 Frame = -3

Query: 750 MQTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPF 571
           MQ+SDSSVYA+GDVA FP+KLF G++RRLEHVDSAR++ARHAV+AI++P KT D DYLPF
Sbjct: 284 MQSSDSSVYAIGDVATFPVKLF-GEMRRLEHVDSARKSARHAVSAIMDPIKTGDFDYLPF 342

Query: 570 FYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRDDYEALS 391
           FYSRVF  SWQFYGD  G+V+H+G++  +   FGAYWV KG + G+FLEGG +++YE +S
Sbjct: 343 FYSRVFAFSWQFYGDPTGDVVHFGEY-EDGKSFGAYWVKKGHLVGSFLEGGTKEEYETIS 401

Query: 390 VVVRRKTKAS-DMSELERQGLAFA---IQESK----KEVP-------DSGVTLGEKPTFV 256
              + K   + D+ ELER+GL FA   + + K    K++P        + V + +KP +V
Sbjct: 402 KATQLKPAVTIDLEELEREGLGFAHTVVSQQKVPEVKDIPSAEMVKQSASVVMIKKPLYV 461

Query: 255 WYATAGVVAAVSISAF 208
           W+A  GVV A S++AF
Sbjct: 462 WHAATGVVVAASVAAF 477



to top

>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score =  154 bits (390), Expect = 2e-37
 Identities = 77/147 (52%), Positives = 103/147 (70%), Gaps = 5/147 (3%)
 Frame = -3

Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDV---DYL 577
           +TS   VYAVGDVA FP+KL++ DVRR+EHVD AR++A  A  AI      + V   DYL
Sbjct: 285 KTSVPDVYAVGDVATFPLKLYN-DVRRVEHVDHARKSAEQAAKAIFAADVGKSVEEYDYL 343

Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDF--TSNSPRFGAYWVSKGQITGAFLEGGNRDDY 403
           P+FYSR F LSWQFYGDNVGE + +GD    S+ P+FG YW+ +G++ GAFLEGG  D+ 
Sbjct: 344 PYFYSRSFDLSWQFYGDNVGETVLFGDNDPASSKPKFGTYWIKEGKVVGAFLEGGTPDEN 403

Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322
           +A++ V R K    D+++L  +GL+FA
Sbjct: 404 KAIAKVARAKPAVEDVNQLAEEGLSFA 430



to top

>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 3 (EC 1.6.5.4) (MDAR 3)
          Length = 434

 Score =  154 bits (390), Expect = 2e-37
 Identities = 77/147 (52%), Positives = 105/147 (71%), Gaps = 5/147 (3%)
 Frame = -3

Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEP---SKTRDVDYL 577
           +TS   VYAVGDVA FP+K++ GDVRR+EHVD +R++A  AV AI      +   + DYL
Sbjct: 286 KTSVPDVYAVGDVATFPLKMY-GDVRRVEHVDHSRKSAEQAVKAIKAAEGGAAVEEYDYL 344

Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVSKGQITGAFLEGGNRDDY 403
           PFFYSR F LSWQFYGDNVG+ + +GD   ++  PRFGAYWV  G++ GAF+EGG+ D+ 
Sbjct: 345 PFFYSRSFDLSWQFYGDNVGDSVLFGDSNPSNPKPRFGAYWVQGGKVVGAFMEGGSGDEN 404

Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322
           +AL+ V + +  A  + EL +QG++FA
Sbjct: 405 KALAKVAKARPSAESLDELVKQGISFA 431



to top

>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 1 (EC 1.6.5.4) (MDAR 1)
          Length = 441

 Score =  142 bits (358), Expect = 1e-33
 Identities = 72/147 (48%), Positives = 100/147 (68%), Gaps = 5/147 (3%)
 Frame = -3

Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAIL--EPSKT-RDVDYL 577
           +TS   VYA+GDVA FP+K++ G  RR+EH D+AR++A  AV AI   E  KT  D DYL
Sbjct: 288 KTSVPDVYALGDVATFPMKMYGG-TRRVEHADNARKSAAQAVKAIKAGEEGKTIPDYDYL 346

Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVSKGQITGAFLEGGNRDDY 403
           P+FYSR F LSW+FYG+NVGE + +GD    S  P+FG YWV  G++ G FLEGG ++++
Sbjct: 347 PYFYSRFFKLSWEFYGENVGESVLFGDNDPKSPKPKFGTYWVKDGKVVGVFLEGGTQEEH 406

Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322
           +A++ V R +     +  L  +GL+FA
Sbjct: 407 KAIAKVARAQPSVESLDVLSEEGLSFA 433



to top

>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 4 (EC 1.6.5.4) (MDAR 4)
          Length = 435

 Score =  142 bits (357), Expect = 1e-33
 Identities = 70/147 (47%), Positives = 102/147 (69%), Gaps = 5/147 (3%)
 Frame = -3

Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAIL---EPSKTRDVDYL 577
           +TS   VYA+GDVA FP+KL++ ++RR+EHVD AR++A  AV AI    E +   + DYL
Sbjct: 287 KTSLPDVYAIGDVATFPMKLYN-EMRRVEHVDHARKSAEQAVKAIKAAEEGNSIPEYDYL 345

Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVSKGQITGAFLEGGNRDDY 403
           P+FYSR F LSWQFYGDNVGE + +GD    S  P+FG+YW+ + ++ GAFLEGG+ ++ 
Sbjct: 346 PYFYSRAFDLSWQFYGDNVGESVLFGDNDPESPKPKFGSYWIKERKVVGAFLEGGSPEEN 405

Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322
            A++ + R +     +  L ++GL+FA
Sbjct: 406 NAIAKLARAQPSVESLEVLSKEGLSFA 432



to top

>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score =  139 bits (351), Expect = 7e-33
 Identities = 70/147 (47%), Positives = 104/147 (70%), Gaps = 5/147 (3%)
 Frame = -3

Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVD---YL 577
           +TS   VYAVGDVA FP+K+++ ++RR+EHVD +R++A  AV AI    + + VD   YL
Sbjct: 286 KTSVPDVYAVGDVATFPLKMYN-EIRRVEHVDHSRKSAEQAVKAIFASEQGKSVDEYDYL 344

Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAYWVSKGQITGAFLEGGNRDDY 403
           P+FYSR F LSWQFYGDNVGE + +GD   NS   +FG YW+  G+I GAFLE G+ ++ 
Sbjct: 345 PYFYSRAFDLSWQFYGDNVGETVLFGDADPNSATHKFGQYWIKDGKIVGAFLESGSPEEN 404

Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322
           +A++ V + +  A+ + +L ++G++FA
Sbjct: 405 KAIAKVAKVQPPAT-LDQLAQEGISFA 430



to top

>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC|
           1.6.5.4) (MDAR seedling) (Ascorbate free radical
           reductase seedling) (AFR reductase seedling)
          Length = 434

 Score =  136 bits (342), Expect = 8e-32
 Identities = 68/147 (46%), Positives = 101/147 (68%), Gaps = 5/147 (3%)
 Frame = -3

Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAIL---EPSKTRDVDYL 577
           +TS   VYAVGDVA FP+KL++ ++RR+EHVD +R++A  AV AI    E     + DYL
Sbjct: 286 KTSVPDVYAVGDVATFPLKLYN-ELRRVEHVDHSRKSAEQAVKAIKASEEGKAIEEYDYL 344

Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAYWVSKGQITGAFLEGGNRDDY 403
           P+FYSR F LSWQFYGDNVG+ + +GD + +S   +FG+YW+  G++ GAFLE G+ ++ 
Sbjct: 345 PYFYSRSFDLSWQFYGDNVGDAVLFGDNSPDSATHKFGSYWIKDGKVVGAFLESGSPEEN 404

Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322
           +A++ V R +        L ++G++FA
Sbjct: 405 KAIAKVARIQPSVESSDLLLKEGISFA 431



to top

>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC|
           1.6.5.4) (MDAR)
          Length = 493

 Score =  113 bits (282), Expect = 7e-25
 Identities = 58/147 (39%), Positives = 90/147 (61%), Gaps = 12/147 (8%)
 Frame = -3

Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPFF 568
           +TS   ++A+GDVAAFP+K++D  + R+EHVD ARR+A+H V ++L  + T   DYLP+F
Sbjct: 340 RTSTPGIFAIGDVAAFPLKIYD-RMTRVEHVDHARRSAQHCVKSLL-TAHTDTYDYLPYF 397

Query: 567 YSRVFTLS-------WQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRD 409
           YSRVF          WQF+GDNVGE +  G+F    P+   +W+  G++ G  +E G+ +
Sbjct: 398 YSRVFEYEGSPRKVWWQFFGDNVGETVEVGNF---DPKIATFWIESGRLKGVLVESGSPE 454

Query: 408 DYEALSVVVRR-----KTKASDMSELE 343
           +++ L  + R      K K +  S +E
Sbjct: 455 EFQLLPKLARSQPLVDKAKLASASSVE 481



to top

>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)|
           (MDAR fruit) (Ascorbate free radical reductase fruit)
           (AFR reductase fruit) (Fragments)
          Length = 166

 Score =  105 bits (262), Expect = 1e-22
 Identities = 55/120 (45%), Positives = 74/120 (61%)
 Frame = -3

Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPFF 568
           +TS   VYAVGDVA +P+KL++ ++RR+EHVD AR +               + DYLP+F
Sbjct: 58  KTSIPDVYAVGDVATYPLKLYN-ELRRVEHVDHARLSIE-------------EYDYLPYF 103

Query: 567 YSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRDDYEALSV 388
           YSR F L+WQFYGDNVGE + + D       FG YW+   ++ G FLEGG  D+Y+   V
Sbjct: 104 YSRTFNLAWQFYGDNVGETVLFPD------NFGTYWI---KVVGVFLEGGTPDEYKVARV 154



to top

>CAMA_PSEPU (P16640) Putidaredoxin reductase (EC 1.18.1.-)|
          Length = 422

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 31/78 (39%), Positives = 44/78 (56%)
 Frame = -3

Query: 750 MQTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPF 571
           MQTSD  + AVGD A F  +L+D  V R+E V +A   AR  +AAIL     RD +  P+
Sbjct: 272 MQTSDPLIMAVGDCARFHSQLYDRWV-RIESVPNALEQAR-KIAAILCGKVPRD-EAAPW 328

Query: 570 FYSRVFTLSWQFYGDNVG 517
           F+S  + +  +  G + G
Sbjct: 329 FWSDQYEIGLKMVGLSEG 346



to top

>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 37.7 bits (86), Expect = 0.038
 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
 Frame = -1

Query: 701 SPSSSLTAMSDGLNMLTRLVEPPGTLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTGTM 522
           S SSS T+ +   +  T       + S  S +     TS T  +S+  S+    +S  + 
Sbjct: 165 SSSSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSS 224

Query: 521 SEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTGT--TTR 399
           SE   T ATS +T   S+ T +    S   S  +GT T  TTR
Sbjct: 225 SETSSTQATSSSTTSTSSSTSTATVTSTPSSTSIGTSTHYTTR 267



to top

>TODA_PSEPU (P13452) Toluene 1,2-dioxygenase system ferredoxin--NAD(+)|
           reductase component (EC 1.18.1.3)
          Length = 409

 Score = 37.7 bits (86), Expect = 0.038
 Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = -3

Query: 744 TSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPFFY 565
           T    V+AVGDVA++P++   G  R LE   +A+R A    AAIL   K      LP  +
Sbjct: 264 TLAKGVFAVGDVASWPLRA--GGRRSLETYMNAQRQAAAVAAAIL--GKNVSAPQLPVSW 319

Query: 564 SRVFTLSWQFYGDNVGEVIHYGDFTSNS-PRFGA 466
           + +     Q  GD  G     GDF S   P  GA
Sbjct: 320 TEIAGHRMQMAGDIEGP----GDFVSRGMPGSGA 349



to top

>XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells homolog|
           (Xeroderma pigmentosum group C-complementing protein
           homolog) (p125)
          Length = 930

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
 Frame = -1

Query: 665 LNMLTRLV---EP--------PGTLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTGTMS 519
           L +LTRLV   +P         G  S    S+  PG S    S++ ES + P +S     
Sbjct: 305 LQLLTRLVLSLQPIPLKSAVTKGRKSSKETSVEGPGGSSELSSNSPESHNKPTTSRRIKE 364

Query: 518 EK*FTTATSQATARGSAHTGSVRARSRAR 432
           E+  +    +ATARG   TG+  +R R +
Sbjct: 365 EETLSEGRGKATARGKRGTGTAGSRQRRK 393



to top

>BPHG_BURCE (P37337) Biphenyl dioxygenase system ferredoxin--NAD(+) reductase|
           component (EC 1.18.1.3)
          Length = 408

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
 Frame = -3

Query: 744 TSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPFFY 565
           TS   V+A GDVAA+P++   G  R LE   +++  A  A +A+L  S+      +P  +
Sbjct: 265 TSCPEVFAAGDVAAWPLR--QGGQRSLETYLNSQMEAEIAASAML--SQPVPAPQVPTSW 320

Query: 564 SRVFTLSWQFYGD--NVGEVIHYGDFTSNSP 478
           + +     Q  GD    GE++  GD  S  P
Sbjct: 321 TEIAGHRIQMIGDAEGPGEIVVRGDAQSGQP 351



to top

>THCD_RHOER (P43494) Rhodocoxin reductase (EC 1.18.1.-)|
          Length = 426

 Score = 35.4 bits (80), Expect = 0.19
 Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 2/163 (1%)
 Frame = -3

Query: 750 MQTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPF 571
           ++T D ++ A+GD AA+PI    G V RLE V +A   AR  +AA L  + T     +P+
Sbjct: 262 LRTPDENISAIGDCAAYPIPGKAGLV-RLESVQNAVDQAR-CLAAQLTGTSTH-YRSVPW 318

Query: 570 FYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRDDYEALS 391
           F+S  +    Q  G   G   H    + +S  F  +     ++ G       RD   A  
Sbjct: 319 FWSEQYESKLQMAGLTAGADTHVVRGSVDSGVFSIFCFLGTRLLGVESVNKPRDHMAARK 378

Query: 390 VVVRRKTKASDMSELERQGLAFAIQESKKEVPD--SGVTLGEK 268
           ++        + +      L  AI   K    D  +   +GE+
Sbjct: 379 ILATEMPLTPEQAADTDFDLKLAIARHKDTHKDEVASADIGER 421



to top

>BEDA_PSEPU (Q07946) Benzene 1,2-dioxygenase system ferredoxin--NAD(+)|
           reductase subunit (EC 1.18.1.3)
          Length = 410

 Score = 34.7 bits (78), Expect = 0.32
 Identities = 27/76 (35%), Positives = 35/76 (46%)
 Frame = -3

Query: 744 TSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPFFY 565
           TS   ++AVGDVA +P  L  G  R LE   +A+R A     AIL   K      LP  +
Sbjct: 265 TSAKGIFAVGDVATWP--LHSGGKRSLETYMNAQRQATAVAKAIL--GKEVSAPQLPVSW 320

Query: 564 SRVFTLSWQFYGDNVG 517
           + +     Q  GD  G
Sbjct: 321 TEIAGHRMQMAGDIEG 336



to top

>CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-1-H)|
          Length = 1234

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 294 QAPLSCFPGWQTLGLVFQVQTCPRPWFYAGQPPTMPRSRPGSHLPGTRP 440
           QA   C PG++TLG +  V+ C    + A  P  + R +P  H PG  P
Sbjct: 47  QATYKCRPGYRTLGTI--VKVCKNGKWVASNPSRICRKKPCGH-PGDTP 92



to top

>LPLA_ECOL6 (Q8FA49) Lipoate-protein ligase A (EC 6.3.2.-)|
          Length = 337

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
 Frame = -3

Query: 621 AAILEPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGA----YWVS 454
           A I+ P KT D+      ++R  +  W F     G+   +         +G     + V 
Sbjct: 217 AEIISPDKTPDLPNFAETFARQSSWEWNF-----GQAPAFSHLLDERFSWGGVELHFDVE 271

Query: 453 KGQITGA--FLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPD 292
           KG IT A  F +  N    EAL+  ++     +DM + E + L     E +KE+P+
Sbjct: 272 KGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELPE 327



to top

>HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)|
          Length = 892

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
 Frame = -1

Query: 350 NLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRSPRSVIGTAGSAAGGE 171
           NL+D      +    + C     P+A SP      R G    CR     I   G   G E
Sbjct: 66  NLQDLLSSASASLLAQVCARGRSPAAHSPRVAARWRHGRGSVCRFGPLQIRVCGKRGGAE 125

Query: 170 TR-----DRFAGGWDKLLEGRRKIYCLHTVTW 90
           TR     D  A   D+   GRR  +C H   W
Sbjct: 126 TRPGRGEDGPARQTDRGPGGRRAAHCSHVPPW 157



to top

>XPC_HUMAN (Q01831) DNA-repair protein complementing XP-C cells (Xeroderma|
           pigmentosum group C complementing protein) (p125)
          Length = 939

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -1

Query: 596 PGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARS 429
           PG S    S   E+   P +S GT  E+ F   T + +A+G  + G  + RS+  S
Sbjct: 342 PGGSSETSSQVLENHTKPKTSKGTKQEETFAKGTCRPSAKGKRNKGGRKKRSKPSS 397



to top

>YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region|
          Length = 260

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -1

Query: 395 CRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRS 216
           CR ++ +KP+    +   D A + P  +  K  +  G P     PS  + RQGSL  C  
Sbjct: 155 CRLMAAIKPKYTVRMTSCDVASQAPLAQILKGMVPCGSPL----PSCRVSRQGSLSACPW 210

Query: 215 PR 210
           PR
Sbjct: 211 PR 212



to top

>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9|
          Length = 3178

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 24/85 (28%), Positives = 38/85 (44%)
 Frame = -1

Query: 707 PRSPSSSLTAMSDGLNMLTRLVEPPGTLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTG 528
           P +PSS+L+  +        + EP  T S  S +     T+    S+T        SST 
Sbjct: 677 PSTPSSTLSTST--------VTEPSSTRSSDSTTTSAGSTTTLQESTTTSEESTTDSSTT 728

Query: 527 TMSEK*FTTATSQATARGSAHTGSV 453
           T+S+   T+++  +T   S  T SV
Sbjct: 729 TISDTSTTSSSPSSTTADSTSTLSV 753



to top

>YMH1_CAEEL (P34468) Hypothetical protein F58A4.1|
          Length = 254

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
 Frame = -1

Query: 707 PRSPSSSLTAMSDGLNMLTRLVEPPGTLSQPSWSLRKPGTSITCHSSTQES---SHCPGS 537
           P+SP+++  + S       RL +P      P  +   P TS +  +ST  S   S    +
Sbjct: 60  PKSPTTTSISTSTVSTTPERLTKPYEETDTPIPTHSSPSTSTSTSTSTSTSTSTSRSTST 119

Query: 536 STGTMSEK*FTTATSQATARGSAHTGSVR 450
            T T      TTATS  T+   A T S +
Sbjct: 120 VTPTTRSSTTTTATSTPTSSSKATTTSAQ 148



to top

>TIG_STRMU (Q8CWZ6) Trigger factor (TF)|
          Length = 427

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
 Frame = +1

Query: 430 ERARDLALTDPVCAEPRAVACEVAVVNYFSDIVPVELPGQCEDS*-VEEWQVIDVPGFRR 606
           ER R+  L + V  E  AV  +  V+++   +  VE  G   D+  +E      +PGF  
Sbjct: 144 ERERN-NLAELVLKEDAAVEGDTVVIDFVGSVDGVEFDGGKGDNFSLELGSGQFIPGF-- 200

Query: 607 LQDGCDSVPGGSTSRVNMFKPSDIAVKELDGERGNITNSIHRAVA 741
            +D       G T +VN+  P D    +L G+      +IH   A
Sbjct: 201 -EDQLVGKKAGETVKVNVTFPEDYQSADLAGKDATFVTTIHEVKA 244



to top

>PININ_BOVIN (P79122) Pinin|
          Length = 703

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 33/120 (27%), Positives = 52/120 (43%)
 Frame = -1

Query: 629 TLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVR 450
           T    S S     +S +  SS+  SS   GSS+   S    +T+ S +    S+ T S  
Sbjct: 583 TSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRTSSSSSSTSGSSSRDSSSSTTSSSE 642

Query: 449 ARSRARSWKVGTGTTTRHCRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAK 270
           +RSR+R    G     +H R +   K R  + L    K+ +  S +  K   ++G+P  K
Sbjct: 643 SRSRSRG--RGHNRDRKHRRSVDR-KRRDASGLERSHKSAKGGSSRDAKAVSSSGMPRFK 699



to top

>CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1353

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 232 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 128
           C   DL+++L VR + PQ +K    L A G N WK
Sbjct: 503 CPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWK 537



to top

>TIR2_YEAST (P33890) Cold shock-induced protein TIR2 precursor (Serine-rich|
           protein 2)
          Length = 251

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = -1

Query: 593 GTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRA 435
           GTS T  SST+ SS    S+  + SE   +   S + A  SA   S  A S A
Sbjct: 111 GTSTTAASSTEASSAATSSAVASSSETTSSAVASSSEATSSAVASSSEASSSA 163



to top

>CHRD_HUMAN (Q9H2X0) Chordin precursor|
          Length = 955

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
 Frame = +1

Query: 457 DPVCA----EPRAVACEVAVVNYFSDIVPVELPGQCEDS*VEEWQVIDVPGFRRLQD--- 615
           DP+C+    + R V C+  V    S   PV+ P QC     E+  V D+PG  R +D   
Sbjct: 723 DPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGE 782

Query: 616 GC 621
           GC
Sbjct: 783 GC 784



to top

>COBQ_METTH (O26880) Probable cobyric acid synthase|
          Length = 504

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -3

Query: 423 GGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPDSGVTLG 274
           G + DD +A+ +   R T  SD+  LE  G A  I++  +E+P  G+  G
Sbjct: 286 GDSLDDLDAIIIPGTRNT-ISDLIHLEENGFADEIRDLSREIPVFGICGG 334



to top

>PHC2_HUMAN (Q8IXK0) Polyhomeotic-like protein 2 (hPH2) (Early development|
           regulatory protein 2)
          Length = 858

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = -1

Query: 701 SPSSSLTAMSDGLNMLTRLVEPPGTLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTG 528
           SPS +L   S+   M    V P   L  P+ +L KPG S  CH  T ++    G   G
Sbjct: 382 SPSVALQPSSEAHAMPLGPVTPALPLQCPTANLHKPGGSQQCHPPTPDTGPQNGHPEG 439



to top

>VE2_HPV05 (P06921) Regulatory protein E2|
          Length = 514

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 47/195 (24%), Positives = 72/195 (36%), Gaps = 12/195 (6%)
 Frame = -1

Query: 707 PRSPSSSLTAMSDGLNMLTRLVEPPGTLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTG 528
           P +P++S TA+      LT   +P  T ++     R+P                      
Sbjct: 217 PATPTTSTTAVDSTSRQLTTSKQPQQTETRGRRYGRRP---------------------- 254

Query: 527 TMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTGTTTRHCRWLSGVKPR------ 366
             S K   + T Q  +R S H    R+RSR++S    T +TTR  R  S  K R      
Sbjct: 255 --SSKSRRSQTQQRRSR-SRHRSRSRSRSRSKSQTHTTRSTTR-SRSTSLTKTRALTSRS 310

Query: 365 ------PRTCLNLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRSPRSV 204
                 P TC   +    R P R++R    ++   + +S      + +      R  R  
Sbjct: 311 RSRGRSPTTC---RRGGGRSPRRRSRSPSTSSSCTTQRS-----QRARAESSTTRGARGS 362

Query: 203 IGTAGSAAGGETRDR 159
            G+ G + GG  R R
Sbjct: 363 RGSRGGSRGGRGRRR 377


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,346,722
Number of Sequences: 219361
Number of extensions: 2928692
Number of successful extensions: 9681
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 8999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9642
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 7902193040
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top