Clone Name | rbasd14c11 |
---|---|
Clone Library Name | barley_pub |
>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic| isoform 2 (EC 1.6.5.4) (MDAR 2) Length = 488 Score = 210 bits (535), Expect = 3e-54 Identities = 105/196 (53%), Positives = 142/196 (72%), Gaps = 15/196 (7%) Frame = -3 Query: 750 MQTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPF 571 MQ+SDSSVYA+GDVA FP+KLF G++RRLEHVDSAR++ARHAV+AI++P KT D DYLPF Sbjct: 284 MQSSDSSVYAIGDVATFPVKLF-GEMRRLEHVDSARKSARHAVSAIMDPIKTGDFDYLPF 342 Query: 570 FYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRDDYEALS 391 FYSRVF SWQFYGD G+V+H+G++ + FGAYWV KG + G+FLEGG +++YE +S Sbjct: 343 FYSRVFAFSWQFYGDPTGDVVHFGEY-EDGKSFGAYWVKKGHLVGSFLEGGTKEEYETIS 401 Query: 390 VVVRRKTKAS-DMSELERQGLAFA---IQESK----KEVP-------DSGVTLGEKPTFV 256 + K + D+ ELER+GL FA + + K K++P + V + +KP +V Sbjct: 402 KATQLKPAVTIDLEELEREGLGFAHTVVSQQKVPEVKDIPSAEMVKQSASVVMIKKPLYV 461 Query: 255 WYATAGVVAAVSISAF 208 W+A GVV A S++AF Sbjct: 462 WHAATGVVVAASVAAF 477
>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 154 bits (390), Expect = 2e-37 Identities = 77/147 (52%), Positives = 103/147 (70%), Gaps = 5/147 (3%) Frame = -3 Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDV---DYL 577 +TS VYAVGDVA FP+KL++ DVRR+EHVD AR++A A AI + V DYL Sbjct: 285 KTSVPDVYAVGDVATFPLKLYN-DVRRVEHVDHARKSAEQAAKAIFAADVGKSVEEYDYL 343 Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDF--TSNSPRFGAYWVSKGQITGAFLEGGNRDDY 403 P+FYSR F LSWQFYGDNVGE + +GD S+ P+FG YW+ +G++ GAFLEGG D+ Sbjct: 344 PYFYSRSFDLSWQFYGDNVGETVLFGDNDPASSKPKFGTYWIKEGKVVGAFLEGGTPDEN 403 Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322 +A++ V R K D+++L +GL+FA Sbjct: 404 KAIAKVARAKPAVEDVNQLAEEGLSFA 430
>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic| isoform 3 (EC 1.6.5.4) (MDAR 3) Length = 434 Score = 154 bits (390), Expect = 2e-37 Identities = 77/147 (52%), Positives = 105/147 (71%), Gaps = 5/147 (3%) Frame = -3 Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEP---SKTRDVDYL 577 +TS VYAVGDVA FP+K++ GDVRR+EHVD +R++A AV AI + + DYL Sbjct: 286 KTSVPDVYAVGDVATFPLKMY-GDVRRVEHVDHSRKSAEQAVKAIKAAEGGAAVEEYDYL 344 Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVSKGQITGAFLEGGNRDDY 403 PFFYSR F LSWQFYGDNVG+ + +GD ++ PRFGAYWV G++ GAF+EGG+ D+ Sbjct: 345 PFFYSRSFDLSWQFYGDNVGDSVLFGDSNPSNPKPRFGAYWVQGGKVVGAFMEGGSGDEN 404 Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322 +AL+ V + + A + EL +QG++FA Sbjct: 405 KALAKVAKARPSAESLDELVKQGISFA 431
>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic| isoform 1 (EC 1.6.5.4) (MDAR 1) Length = 441 Score = 142 bits (358), Expect = 1e-33 Identities = 72/147 (48%), Positives = 100/147 (68%), Gaps = 5/147 (3%) Frame = -3 Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAIL--EPSKT-RDVDYL 577 +TS VYA+GDVA FP+K++ G RR+EH D+AR++A AV AI E KT D DYL Sbjct: 288 KTSVPDVYALGDVATFPMKMYGG-TRRVEHADNARKSAAQAVKAIKAGEEGKTIPDYDYL 346 Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVSKGQITGAFLEGGNRDDY 403 P+FYSR F LSW+FYG+NVGE + +GD S P+FG YWV G++ G FLEGG ++++ Sbjct: 347 PYFYSRFFKLSWEFYGENVGESVLFGDNDPKSPKPKFGTYWVKDGKVVGVFLEGGTQEEH 406 Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322 +A++ V R + + L +GL+FA Sbjct: 407 KAIAKVARAQPSVESLDVLSEEGLSFA 433
>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic| isoform 4 (EC 1.6.5.4) (MDAR 4) Length = 435 Score = 142 bits (357), Expect = 1e-33 Identities = 70/147 (47%), Positives = 102/147 (69%), Gaps = 5/147 (3%) Frame = -3 Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAIL---EPSKTRDVDYL 577 +TS VYA+GDVA FP+KL++ ++RR+EHVD AR++A AV AI E + + DYL Sbjct: 287 KTSLPDVYAIGDVATFPMKLYN-EMRRVEHVDHARKSAEQAVKAIKAAEEGNSIPEYDYL 345 Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVSKGQITGAFLEGGNRDDY 403 P+FYSR F LSWQFYGDNVGE + +GD S P+FG+YW+ + ++ GAFLEGG+ ++ Sbjct: 346 PYFYSRAFDLSWQFYGDNVGESVLFGDNDPESPKPKFGSYWIKERKVVGAFLEGGSPEEN 405 Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322 A++ + R + + L ++GL+FA Sbjct: 406 NAIAKLARAQPSVESLEVLSKEGLSFA 432
>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 139 bits (351), Expect = 7e-33 Identities = 70/147 (47%), Positives = 104/147 (70%), Gaps = 5/147 (3%) Frame = -3 Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVD---YL 577 +TS VYAVGDVA FP+K+++ ++RR+EHVD +R++A AV AI + + VD YL Sbjct: 286 KTSVPDVYAVGDVATFPLKMYN-EIRRVEHVDHSRKSAEQAVKAIFASEQGKSVDEYDYL 344 Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAYWVSKGQITGAFLEGGNRDDY 403 P+FYSR F LSWQFYGDNVGE + +GD NS +FG YW+ G+I GAFLE G+ ++ Sbjct: 345 PYFYSRAFDLSWQFYGDNVGETVLFGDADPNSATHKFGQYWIKDGKIVGAFLESGSPEEN 404 Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322 +A++ V + + A+ + +L ++G++FA Sbjct: 405 KAIAKVAKVQPPAT-LDQLAQEGISFA 430
>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC| 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) Length = 434 Score = 136 bits (342), Expect = 8e-32 Identities = 68/147 (46%), Positives = 101/147 (68%), Gaps = 5/147 (3%) Frame = -3 Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAIL---EPSKTRDVDYL 577 +TS VYAVGDVA FP+KL++ ++RR+EHVD +R++A AV AI E + DYL Sbjct: 286 KTSVPDVYAVGDVATFPLKLYN-ELRRVEHVDHSRKSAEQAVKAIKASEEGKAIEEYDYL 344 Query: 576 PFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAYWVSKGQITGAFLEGGNRDDY 403 P+FYSR F LSWQFYGDNVG+ + +GD + +S +FG+YW+ G++ GAFLE G+ ++ Sbjct: 345 PYFYSRSFDLSWQFYGDNVGDAVLFGDNSPDSATHKFGSYWIKDGKVVGAFLESGSPEEN 404 Query: 402 EALSVVVRRKTKASDMSELERQGLAFA 322 +A++ V R + L ++G++FA Sbjct: 405 KAIAKVARIQPSVESSDLLLKEGISFA 431
>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC| 1.6.5.4) (MDAR) Length = 493 Score = 113 bits (282), Expect = 7e-25 Identities = 58/147 (39%), Positives = 90/147 (61%), Gaps = 12/147 (8%) Frame = -3 Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPFF 568 +TS ++A+GDVAAFP+K++D + R+EHVD ARR+A+H V ++L + T DYLP+F Sbjct: 340 RTSTPGIFAIGDVAAFPLKIYD-RMTRVEHVDHARRSAQHCVKSLL-TAHTDTYDYLPYF 397 Query: 567 YSRVFTLS-------WQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRD 409 YSRVF WQF+GDNVGE + G+F P+ +W+ G++ G +E G+ + Sbjct: 398 YSRVFEYEGSPRKVWWQFFGDNVGETVEVGNF---DPKIATFWIESGRLKGVLVESGSPE 454 Query: 408 DYEALSVVVRR-----KTKASDMSELE 343 +++ L + R K K + S +E Sbjct: 455 EFQLLPKLARSQPLVDKAKLASASSVE 481
>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)| (MDAR fruit) (Ascorbate free radical reductase fruit) (AFR reductase fruit) (Fragments) Length = 166 Score = 105 bits (262), Expect = 1e-22 Identities = 55/120 (45%), Positives = 74/120 (61%) Frame = -3 Query: 747 QTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPFF 568 +TS VYAVGDVA +P+KL++ ++RR+EHVD AR + + DYLP+F Sbjct: 58 KTSIPDVYAVGDVATYPLKLYN-ELRRVEHVDHARLSIE-------------EYDYLPYF 103 Query: 567 YSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRDDYEALSV 388 YSR F L+WQFYGDNVGE + + D FG YW+ ++ G FLEGG D+Y+ V Sbjct: 104 YSRTFNLAWQFYGDNVGETVLFPD------NFGTYWI---KVVGVFLEGGTPDEYKVARV 154
>CAMA_PSEPU (P16640) Putidaredoxin reductase (EC 1.18.1.-)| Length = 422 Score = 40.4 bits (93), Expect = 0.006 Identities = 31/78 (39%), Positives = 44/78 (56%) Frame = -3 Query: 750 MQTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPF 571 MQTSD + AVGD A F +L+D V R+E V +A AR +AAIL RD + P+ Sbjct: 272 MQTSDPLIMAVGDCARFHSQLYDRWV-RIESVPNALEQAR-KIAAILCGKVPRD-EAAPW 328 Query: 570 FYSRVFTLSWQFYGDNVG 517 F+S + + + G + G Sbjct: 329 FWSDQYEIGLKMVGLSEG 346
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 37.7 bits (86), Expect = 0.038 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 2/103 (1%) Frame = -1 Query: 701 SPSSSLTAMSDGLNMLTRLVEPPGTLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTGTM 522 S SSS T+ + + T + S S + TS T +S+ S+ +S + Sbjct: 165 SSSSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSS 224 Query: 521 SEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTGT--TTR 399 SE T ATS +T S+ T + S S +GT T TTR Sbjct: 225 SETSSTQATSSSTTSTSSSTSTATVTSTPSSTSIGTSTHYTTR 267
>TODA_PSEPU (P13452) Toluene 1,2-dioxygenase system ferredoxin--NAD(+)| reductase component (EC 1.18.1.3) Length = 409 Score = 37.7 bits (86), Expect = 0.038 Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Frame = -3 Query: 744 TSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPFFY 565 T V+AVGDVA++P++ G R LE +A+R A AAIL K LP + Sbjct: 264 TLAKGVFAVGDVASWPLRA--GGRRSLETYMNAQRQAAAVAAAIL--GKNVSAPQLPVSW 319 Query: 564 SRVFTLSWQFYGDNVGEVIHYGDFTSNS-PRFGA 466 + + Q GD G GDF S P GA Sbjct: 320 TEIAGHRMQMAGDIEGP----GDFVSRGMPGSGA 349
>XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells homolog| (Xeroderma pigmentosum group C-complementing protein homolog) (p125) Length = 930 Score = 35.8 bits (81), Expect = 0.15 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Frame = -1 Query: 665 LNMLTRLV---EP--------PGTLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTGTMS 519 L +LTRLV +P G S S+ PG S S++ ES + P +S Sbjct: 305 LQLLTRLVLSLQPIPLKSAVTKGRKSSKETSVEGPGGSSELSSNSPESHNKPTTSRRIKE 364 Query: 518 EK*FTTATSQATARGSAHTGSVRARSRAR 432 E+ + +ATARG TG+ +R R + Sbjct: 365 EETLSEGRGKATARGKRGTGTAGSRQRRK 393
>BPHG_BURCE (P37337) Biphenyl dioxygenase system ferredoxin--NAD(+) reductase| component (EC 1.18.1.3) Length = 408 Score = 35.8 bits (81), Expect = 0.15 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%) Frame = -3 Query: 744 TSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPFFY 565 TS V+A GDVAA+P++ G R LE +++ A A +A+L S+ +P + Sbjct: 265 TSCPEVFAAGDVAAWPLR--QGGQRSLETYLNSQMEAEIAASAML--SQPVPAPQVPTSW 320 Query: 564 SRVFTLSWQFYGD--NVGEVIHYGDFTSNSP 478 + + Q GD GE++ GD S P Sbjct: 321 TEIAGHRIQMIGDAEGPGEIVVRGDAQSGQP 351
>THCD_RHOER (P43494) Rhodocoxin reductase (EC 1.18.1.-)| Length = 426 Score = 35.4 bits (80), Expect = 0.19 Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 2/163 (1%) Frame = -3 Query: 750 MQTSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPF 571 ++T D ++ A+GD AA+PI G V RLE V +A AR +AA L + T +P+ Sbjct: 262 LRTPDENISAIGDCAAYPIPGKAGLV-RLESVQNAVDQAR-CLAAQLTGTSTH-YRSVPW 318 Query: 570 FYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRDDYEALS 391 F+S + Q G G H + +S F + ++ G RD A Sbjct: 319 FWSEQYESKLQMAGLTAGADTHVVRGSVDSGVFSIFCFLGTRLLGVESVNKPRDHMAARK 378 Query: 390 VVVRRKTKASDMSELERQGLAFAIQESKKEVPD--SGVTLGEK 268 ++ + + L AI K D + +GE+ Sbjct: 379 ILATEMPLTPEQAADTDFDLKLAIARHKDTHKDEVASADIGER 421
>BEDA_PSEPU (Q07946) Benzene 1,2-dioxygenase system ferredoxin--NAD(+)| reductase subunit (EC 1.18.1.3) Length = 410 Score = 34.7 bits (78), Expect = 0.32 Identities = 27/76 (35%), Positives = 35/76 (46%) Frame = -3 Query: 744 TSDSSVYAVGDVAAFPIKLFDGDVRRLEHVDSARRTARHAVAAILEPSKTRDVDYLPFFY 565 TS ++AVGDVA +P L G R LE +A+R A AIL K LP + Sbjct: 265 TSAKGIFAVGDVATWP--LHSGGKRSLETYMNAQRQATAVAKAIL--GKEVSAPQLPVSW 320 Query: 564 SRVFTLSWQFYGDNVG 517 + + Q GD G Sbjct: 321 TEIAGHRMQMAGDIEG 336
>CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-1-H)| Length = 1234 Score = 32.7 bits (73), Expect = 1.2 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +3 Query: 294 QAPLSCFPGWQTLGLVFQVQTCPRPWFYAGQPPTMPRSRPGSHLPGTRP 440 QA C PG++TLG + V+ C + A P + R +P H PG P Sbjct: 47 QATYKCRPGYRTLGTI--VKVCKNGKWVASNPSRICRKKPCGH-PGDTP 92
>LPLA_ECOL6 (Q8FA49) Lipoate-protein ligase A (EC 6.3.2.-)| Length = 337 Score = 32.3 bits (72), Expect = 1.6 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 6/116 (5%) Frame = -3 Query: 621 AAILEPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGA----YWVS 454 A I+ P KT D+ ++R + W F G+ + +G + V Sbjct: 217 AEIISPDKTPDLPNFAETFARQSSWEWNF-----GQAPAFSHLLDERFSWGGVELHFDVE 271 Query: 453 KGQITGA--FLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPD 292 KG IT A F + N EAL+ ++ +DM + E + L E +KE+P+ Sbjct: 272 KGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELPE 327
>HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)| Length = 892 Score = 32.3 bits (72), Expect = 1.6 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Frame = -1 Query: 350 NLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRSPRSVIGTAGSAAGGE 171 NL+D + + C P+A SP R G CR I G G E Sbjct: 66 NLQDLLSSASASLLAQVCARGRSPAAHSPRVAARWRHGRGSVCRFGPLQIRVCGKRGGAE 125 Query: 170 TR-----DRFAGGWDKLLEGRRKIYCLHTVTW 90 TR D A D+ GRR +C H W Sbjct: 126 TRPGRGEDGPARQTDRGPGGRRAAHCSHVPPW 157
>XPC_HUMAN (Q01831) DNA-repair protein complementing XP-C cells (Xeroderma| pigmentosum group C complementing protein) (p125) Length = 939 Score = 32.0 bits (71), Expect = 2.1 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = -1 Query: 596 PGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARS 429 PG S S E+ P +S GT E+ F T + +A+G + G + RS+ S Sbjct: 342 PGGSSETSSQVLENHTKPKTSKGTKQEETFAKGTCRPSAKGKRNKGGRKKRSKPSS 397
>YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region| Length = 260 Score = 31.6 bits (70), Expect = 2.7 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = -1 Query: 395 CRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRS 216 CR ++ +KP+ + D A + P + K + G P PS + RQGSL C Sbjct: 155 CRLMAAIKPKYTVRMTSCDVASQAPLAQILKGMVPCGSPL----PSCRVSRQGSLSACPW 210 Query: 215 PR 210 PR Sbjct: 211 PR 212
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 31.6 bits (70), Expect = 2.7 Identities = 24/85 (28%), Positives = 38/85 (44%) Frame = -1 Query: 707 PRSPSSSLTAMSDGLNMLTRLVEPPGTLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTG 528 P +PSS+L+ + + EP T S S + T+ S+T SST Sbjct: 677 PSTPSSTLSTST--------VTEPSSTRSSDSTTTSAGSTTTLQESTTTSEESTTDSSTT 728 Query: 527 TMSEK*FTTATSQATARGSAHTGSV 453 T+S+ T+++ +T S T SV Sbjct: 729 TISDTSTTSSSPSSTTADSTSTLSV 753
>YMH1_CAEEL (P34468) Hypothetical protein F58A4.1| Length = 254 Score = 31.6 bits (70), Expect = 2.7 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 3/89 (3%) Frame = -1 Query: 707 PRSPSSSLTAMSDGLNMLTRLVEPPGTLSQPSWSLRKPGTSITCHSSTQES---SHCPGS 537 P+SP+++ + S RL +P P + P TS + +ST S S + Sbjct: 60 PKSPTTTSISTSTVSTTPERLTKPYEETDTPIPTHSSPSTSTSTSTSTSTSTSTSRSTST 119 Query: 536 STGTMSEK*FTTATSQATARGSAHTGSVR 450 T T TTATS T+ A T S + Sbjct: 120 VTPTTRSSTTTTATSTPTSSSKATTTSAQ 148
>TIG_STRMU (Q8CWZ6) Trigger factor (TF)| Length = 427 Score = 31.2 bits (69), Expect = 3.6 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%) Frame = +1 Query: 430 ERARDLALTDPVCAEPRAVACEVAVVNYFSDIVPVELPGQCEDS*-VEEWQVIDVPGFRR 606 ER R+ L + V E AV + V+++ + VE G D+ +E +PGF Sbjct: 144 ERERN-NLAELVLKEDAAVEGDTVVIDFVGSVDGVEFDGGKGDNFSLELGSGQFIPGF-- 200 Query: 607 LQDGCDSVPGGSTSRVNMFKPSDIAVKELDGERGNITNSIHRAVA 741 +D G T +VN+ P D +L G+ +IH A Sbjct: 201 -EDQLVGKKAGETVKVNVTFPEDYQSADLAGKDATFVTTIHEVKA 244
>PININ_BOVIN (P79122) Pinin| Length = 703 Score = 31.2 bits (69), Expect = 3.6 Identities = 33/120 (27%), Positives = 52/120 (43%) Frame = -1 Query: 629 TLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVR 450 T S S +S + SS+ SS GSS+ S +T+ S + S+ T S Sbjct: 583 TSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRTSSSSSSTSGSSSRDSSSSTTSSSE 642 Query: 449 ARSRARSWKVGTGTTTRHCRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAK 270 +RSR+R G +H R + K R + L K+ + S + K ++G+P K Sbjct: 643 SRSRSRG--RGHNRDRKHRRSVDR-KRRDASGLERSHKSAKGGSSRDAKAVSSSGMPRFK 699
>CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) Length = 1353 Score = 31.2 bits (69), Expect = 3.6 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 232 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 128 C DL+++L VR + PQ +K L A G N WK Sbjct: 503 CPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWK 537
>TIR2_YEAST (P33890) Cold shock-induced protein TIR2 precursor (Serine-rich| protein 2) Length = 251 Score = 30.8 bits (68), Expect = 4.7 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = -1 Query: 593 GTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRA 435 GTS T SST+ SS S+ + SE + S + A SA S A S A Sbjct: 111 GTSTTAASSTEASSAATSSAVASSSETTSSAVASSSEATSSAVASSSEASSSA 163
>CHRD_HUMAN (Q9H2X0) Chordin precursor| Length = 955 Score = 30.8 bits (68), Expect = 4.7 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%) Frame = +1 Query: 457 DPVCA----EPRAVACEVAVVNYFSDIVPVELPGQCEDS*VEEWQVIDVPGFRRLQD--- 615 DP+C+ + R V C+ V S PV+ P QC E+ V D+PG R +D Sbjct: 723 DPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGE 782 Query: 616 GC 621 GC Sbjct: 783 GC 784
>COBQ_METTH (O26880) Probable cobyric acid synthase| Length = 504 Score = 30.4 bits (67), Expect = 6.1 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 423 GGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPDSGVTLG 274 G + DD +A+ + R T SD+ LE G A I++ +E+P G+ G Sbjct: 286 GDSLDDLDAIIIPGTRNT-ISDLIHLEENGFADEIRDLSREIPVFGICGG 334
>PHC2_HUMAN (Q8IXK0) Polyhomeotic-like protein 2 (hPH2) (Early development| regulatory protein 2) Length = 858 Score = 30.4 bits (67), Expect = 6.1 Identities = 20/58 (34%), Positives = 26/58 (44%) Frame = -1 Query: 701 SPSSSLTAMSDGLNMLTRLVEPPGTLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTG 528 SPS +L S+ M V P L P+ +L KPG S CH T ++ G G Sbjct: 382 SPSVALQPSSEAHAMPLGPVTPALPLQCPTANLHKPGGSQQCHPPTPDTGPQNGHPEG 439
>VE2_HPV05 (P06921) Regulatory protein E2| Length = 514 Score = 30.0 bits (66), Expect = 8.0 Identities = 47/195 (24%), Positives = 72/195 (36%), Gaps = 12/195 (6%) Frame = -1 Query: 707 PRSPSSSLTAMSDGLNMLTRLVEPPGTLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTG 528 P +P++S TA+ LT +P T ++ R+P Sbjct: 217 PATPTTSTTAVDSTSRQLTTSKQPQQTETRGRRYGRRP---------------------- 254 Query: 527 TMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTGTTTRHCRWLSGVKPR------ 366 S K + T Q +R S H R+RSR++S T +TTR R S K R Sbjct: 255 --SSKSRRSQTQQRRSR-SRHRSRSRSRSRSKSQTHTTRSTTR-SRSTSLTKTRALTSRS 310 Query: 365 ------PRTCLNLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRSPRSV 204 P TC + R P R++R ++ + +S + + R R Sbjct: 311 RSRGRSPTTC---RRGGGRSPRRRSRSPSTSSSCTTQRS-----QRARAESSTTRGARGS 362 Query: 203 IGTAGSAAGGETRDR 159 G+ G + GG R R Sbjct: 363 RGSRGGSRGGRGRRR 377 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 122,346,722 Number of Sequences: 219361 Number of extensions: 2928692 Number of successful extensions: 9681 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 8999 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9642 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 7902193040 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)