>PYRD_BUCAP (Q8K9I5) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 336

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/60 (30%), Positives = 34/60 (56%)
 Frame = -1

Query: 226 EGYLGYSGGKLDDVTVVVSIVRKSEL*AVDKLYFYSDLMAMAAASCEPYSDRVRMLAFGL 47
           +G +G + GK  D  +  +I  K  L  ++K+YFY+  +A+  +S  P +  +R L +G+
Sbjct: 133 KGIIGINIGKNKDTKIEDAI--KDYLICIEKIYFYASYIAINISS--PNTINLRKLQYGI 188

>HEXA_MOUSE (P29416) Beta-hexosaminidase alpha chain precursor (EC 3.2.1.52)|
           (N-acetyl-beta-glucosaminidase)
           (Beta-N-acetylhexosaminidase) (Hexosaminidase A)
          Length = 528

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 174 CPLLGNLNYKLLISCISTRILWPWPQQVASHIR 76
           C L  +L     ++C++T  LWPWPQ + ++ R
Sbjct: 4   CRLWVSLLLAAALACLATA-LWPWPQYIQTYHR 35

>Y2049_PROAC (Q6A651) UPF0085 protein PPA2049|
          Length = 294

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = -1

Query: 268 SGSGRSPFSDAALAEGYLGYSGGKLDDVTVVVSIVRKSEL*AVDK 134
           S SG++P S       YLGY G K  +V +V  I   +EL AVD+
Sbjct: 158 SRSGKTPLSI------YLGYLGYKTVNVPLVPGIAPPTELAAVDR 196

>XKDO_BACSU (P54334) Phage-like element PBSX protein xkdO|
          Length = 1332

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 271  GSGSGRSPFSDAALAEGYLGYSGGKLDDVTVVVSIVR 161
            G G+ R+P  +AA A GY+    G +D+V  + S+ R
Sbjct: 1161 GMGNIRNPIHNAAAAIGYIKSRYGSIDNVPGIKSLKR 1197

>GLGB_SHEON (Q8EGU7) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 746

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 113 YGHGRSKLRAIFGSSPNACIWAEEXPIPGLR 21
           Y +GR ++R+   S  NAC W  E  + GLR
Sbjct: 386 YNYGRGEVRSFLLS--NACYWLREFHLDGLR 414

>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor|
          Length = 1736

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 152 FRFPNNGHDNCYIIQLAPGVAQIAFCERRVRERAPPGP 265
           FRF ++G D   ++      AQ    + R+  R PPGP
Sbjct: 454 FRFGSSGGDKGPVVAAQEAQAQAILQQARLALRGPPGP 491

>HEXA_RAT (Q641X3) Beta-hexosaminidase alpha chain precursor (EC 3.2.1.52)|
           (N-acetyl-beta-glucosaminidase)
           (Beta-N-acetylhexosaminidase) (Hexosaminidase A)
          Length = 528

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 174 CPLLGNLNYKLLISCISTRILWPWPQQV-ASHIR 76
           C L  +L     ++C++T  LWPWPQ +  SH R
Sbjct: 4   CRLWVSLLLAAALACLATA-LWPWPQYIQTSHRR 36


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,176,304
Number of Sequences: 219361
Number of extensions: 697254
Number of successful extensions: 1988
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1988
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)