ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13n10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK065196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E16, full insert sequence Length = 1398 Score = 456 bits (230), Expect = e-125 Identities = 368/414 (88%) Strand = Plus / Minus Query: 271 caggagtctatgaaggctgtggaatttcgtcaaggcggaacatgtttatctcttgctgct 330 ||||||| ||||||| || ||| |||| | ||||||| |||| | ||||||||||||| Sbjct: 1088 caggagtttatgaagattgcggagtttcttgaaggcggtacattgtgatctcttgctgct 1029 Query: 331 tgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtagtacttgacactga 390 ||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| Sbjct: 1028 tgaagtacctccggtcttcctcgtcaacaagaaccaggttcaggtagtacttgacattga 969 Query: 391 acttgttgtttatgttgcggtaagtcggggttagctcgtatggagtcaagaacagcctta 450 ||||||||||||||||||||||||||||||| | ||| ||||| |||||||| || |||| Sbjct: 968 acttgttgtttatgttgcggtaagtcggggtcaactcatatggtgtcaagaagagtctta 909 Query: 451 ctggaatagattctcctctgactggggcaccatccatcagctcaaatttagcaagtgtct 510 | |||||||| || ||||| || || || |||||||||| |||||| || |||||||||| Sbjct: 908 ccggaatagactcacctcttacgggagcgccatccatcaactcaaactttgcaagtgtct 849 Query: 511 cagtctcaacatatgtgttaggacctgatcctgttgattcccggcggcgaatctcaagct 570 ||||||||| ||||||| ||| || ||||||||||||||||| || ||||||||||||| Sbjct: 848 cagtctcaatatatgtgccaggcccagatcctgttgattcccgccgacgaatctcaagct 789 Query: 571 ccatgttttttatctttattctgactagaagaaaatagatctttcctacaatgacatcct 630 ||||||| |||||||||||||||||||||||||||||||| ||||| || || ||||||| Sbjct: 788 ccatgttctttatctttattctgactagaagaaaatagatttttcccacgatcacatcct 729 Query: 631 tgagatggtacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 728 tgagatggtacttgcttttgctgtactcaaattcaatatgcaaacaatcttcaa 675
>gb|AY105963.1| Zea mays PCO142195 mRNA sequence Length = 1337 Score = 367 bits (185), Expect = 3e-98 Identities = 311/353 (88%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtag 377 |||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| Sbjct: 996 atctcttgctgcttgaagtacctccgatcttcctcgtccacaaggaccagattcaggtaa 937 Query: 378 tacttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtc 437 |||||||| ||||| ||||||||||||||||||||||||||||| | ||| || || ||| Sbjct: 936 tacttgacgctgaatttgttgtttatgttgcggtaagtcggggtcaactcatagggtgtc 877 Query: 438 aagaacagccttactggaatagattctcctctgactggggcaccatccatcagctcaaat 497 | ||||||||| |||||||||||||| ||||| || || ||||||||||||| |||||| Sbjct: 876 aggaacagcctcactggaatagattcacctctcacaggagcaccatccatcaactcaaac 817 Query: 498 ttagcaagtgtctcagtctcaacatatgtgttaggacctgatcctgttgattcccggcgg 557 || ||||| |||||||| |||||||||||||||| ||||||||||||||||||| || Sbjct: 816 tttgcaagagtctcagtttcaacatatgtgttagagcctgatcctgttgattccctacgc 757 Query: 558 cgaatctcaagctccatgttttttatctttattctgactagaagaaaatagatctttcct 617 | ||| || || ||||| |||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 756 ctaatttccagttccatattttttatctttattctgacaagaaggaaatatatcttccca 697 Query: 618 acaatgacatccttgagatggtacttgcttttgctgtactcaaactcaatatg 670 | ||| ||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 696 ataatcacatcattgagatggtacttgcttttgctgtattcaaactcaatatg 644
>dbj|AK073408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F22, full insert sequence Length = 1386 Score = 303 bits (153), Expect = 4e-79 Identities = 303/353 (85%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtag 377 |||||||||||||||||||| |||| |||||||| || ||||||||||| || |||||| Sbjct: 982 atctcttgctgcttgaagtacctcctatcttcctcatcaacaaggaccagattcaggtag 923 Query: 378 tacttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtc 437 |||||||| |||||||||||||||||||| || || | ||||| |||||||| || ||| Sbjct: 922 tacttgacgctgaacttgttgtttatgttccgatacgaaggggtcagctcgtaaggcgtc 863 Query: 438 aagaacagccttactggaatagattctcctctgactggggcaccatccatcagctcaaat 497 ||||| ||||| || || || |||||||||||||| || ||||||||||||| |||||| Sbjct: 862 aagaatagcctcaccgggatggattctcctctgacaggagcaccatccatcaactcaaac 803 Query: 498 ttagcaagtgtctcagtctcaacatatgtgttaggacctgatcctgttgattcccggcgg 557 || ||||| || |||||||||||||||| ||| |||| |||||||||||||| || Sbjct: 802 tttgcaagagtttcagtctcaacatatgcactagagcctgctcctgttgattccctacga 743 Query: 558 cgaatctcaagctccatgttttttatctttattctgactagaagaaaatagatctttcct 617 || | || || |||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 742 cgtacttctagttccatgttttttatctttattctgacaagaagaaagtagatcttccca 683 Query: 618 acaatgacatccttgagatggtacttgcttttgctgtactcaaactcaatatg 670 | ||| |||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 682 ataatcacatccttgagatggtacttgcttttgctgtattcgaactcaatatg 630
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 202 bits (102), Expect = 1e-48 Identities = 147/162 (90%) Strand = Plus / Minus Query: 480 ccatccatcagctcaaatttagcaagtgtctcagtctcaacatatgtgttaggacctgat 539 |||||||||| |||||| || ||||||||||||||||||| ||||||| ||| || ||| Sbjct: 126479 ccatccatcaactcaaactttgcaagtgtctcagtctcaatatatgtgccaggcccagat 126420 Query: 540 cctgttgattcccggcggcgaatctcaagctccatgttttttatctttattctgactaga 599 |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 126419 cctgttgattcccgccgacgaatctcaagctccatgttctttatctttattctgactaga 126360 Query: 600 agaaaatagatctttcctacaatgacatccttgagatggtac 641 ||||||||||| ||||| || || |||||||||||||||||| Sbjct: 126359 agaaaatagatttttcccacgatcacatccttgagatggtac 126318 Score = 194 bits (98), Expect = 3e-46 Identities = 167/190 (87%) Strand = Plus / Minus Query: 271 caggagtctatgaaggctgtggaatttcgtcaaggcggaacatgtttatctcttgctgct 330 ||||||| ||||||| || ||| |||| | ||||||| |||| | ||||||||||||| Sbjct: 126816 caggagtttatgaagattgcggagtttcttgaaggcggtacattgtgatctcttgctgct 126757 Query: 331 tgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtagtacttgacactga 390 ||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| Sbjct: 126756 tgaagtacctccggtcttcctcgtcaacaagaaccaggttcaggtagtacttgacattga 126697 Query: 391 acttgttgtttatgttgcggtaagtcggggttagctcgtatggagtcaagaacagcctta 450 ||||||||||||||||||||||||||||||| | ||| ||||| |||||||| || |||| Sbjct: 126696 acttgttgtttatgttgcggtaagtcggggtcaactcatatggtgtcaagaagagtctta 126637 Query: 451 ctggaataga 460 | |||||||| Sbjct: 126636 ccggaataga 126627 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 639 tacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 ||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 126234 tacttgcttttgctgtactcaaattcaatatgcaaacaatcttcaa 126189
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 202 bits (102), Expect = 1e-48 Identities = 147/162 (90%) Strand = Plus / Minus Query: 480 ccatccatcagctcaaatttagcaagtgtctcagtctcaacatatgtgttaggacctgat 539 |||||||||| |||||| || ||||||||||||||||||| ||||||| ||| || ||| Sbjct: 23790441 ccatccatcaactcaaactttgcaagtgtctcagtctcaatatatgtgccaggcccagat 23790382 Query: 540 cctgttgattcccggcggcgaatctcaagctccatgttttttatctttattctgactaga 599 |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23790381 cctgttgattcccgccgacgaatctcaagctccatgttctttatctttattctgactaga 23790322 Query: 600 agaaaatagatctttcctacaatgacatccttgagatggtac 641 ||||||||||| ||||| || || |||||||||||||||||| Sbjct: 23790321 agaaaatagatttttcccacgatcacatccttgagatggtac 23790280 Score = 194 bits (98), Expect = 3e-46 Identities = 167/190 (87%) Strand = Plus / Minus Query: 271 caggagtctatgaaggctgtggaatttcgtcaaggcggaacatgtttatctcttgctgct 330 ||||||| ||||||| || ||| |||| | ||||||| |||| | ||||||||||||| Sbjct: 23790778 caggagtttatgaagattgcggagtttcttgaaggcggtacattgtgatctcttgctgct 23790719 Query: 331 tgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtagtacttgacactga 390 ||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| Sbjct: 23790718 tgaagtacctccggtcttcctcgtcaacaagaaccaggttcaggtagtacttgacattga 23790659 Query: 391 acttgttgtttatgttgcggtaagtcggggttagctcgtatggagtcaagaacagcctta 450 ||||||||||||||||||||||||||||||| | ||| ||||| |||||||| || |||| Sbjct: 23790658 acttgttgtttatgttgcggtaagtcggggtcaactcatatggtgtcaagaagagtctta 23790599 Query: 451 ctggaataga 460 | |||||||| Sbjct: 23790598 ccggaataga 23790589 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 639 tacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 ||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 23790196 tacttgcttttgctgtactcaaattcaatatgcaaacaatcttcaa 23790151
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 202 bits (102), Expect = 1e-48 Identities = 147/162 (90%) Strand = Plus / Minus Query: 480 ccatccatcagctcaaatttagcaagtgtctcagtctcaacatatgtgttaggacctgat 539 |||||||||| |||||| || ||||||||||||||||||| ||||||| ||| || ||| Sbjct: 24102110 ccatccatcaactcaaactttgcaagtgtctcagtctcaatatatgtgccaggcccagat 24102051 Query: 540 cctgttgattcccggcggcgaatctcaagctccatgttttttatctttattctgactaga 599 |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 24102050 cctgttgattcccgccgacgaatctcaagctccatgttctttatctttattctgactaga 24101991 Query: 600 agaaaatagatctttcctacaatgacatccttgagatggtac 641 ||||||||||| ||||| || || |||||||||||||||||| Sbjct: 24101990 agaaaatagatttttcccacgatcacatccttgagatggtac 24101949 Score = 194 bits (98), Expect = 3e-46 Identities = 167/190 (87%) Strand = Plus / Minus Query: 271 caggagtctatgaaggctgtggaatttcgtcaaggcggaacatgtttatctcttgctgct 330 ||||||| ||||||| || ||| |||| | ||||||| |||| | ||||||||||||| Sbjct: 24102447 caggagtttatgaagattgcggagtttcttgaaggcggtacattgtgatctcttgctgct 24102388 Query: 331 tgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtagtacttgacactga 390 ||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| Sbjct: 24102387 tgaagtacctccggtcttcctcgtcaacaagaaccaggttcaggtagtacttgacattga 24102328 Query: 391 acttgttgtttatgttgcggtaagtcggggttagctcgtatggagtcaagaacagcctta 450 ||||||||||||||||||||||||||||||| | ||| ||||| |||||||| || |||| Sbjct: 24102327 acttgttgtttatgttgcggtaagtcggggtcaactcatatggtgtcaagaagagtctta 24102268 Query: 451 ctggaataga 460 | |||||||| Sbjct: 24102267 ccggaataga 24102258 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 639 tacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 ||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 24101865 tacttgcttttgctgtactcaaattcaatatgcaaacaatcttcaa 24101820
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 200 bits (101), Expect = 4e-48 Identities = 155/173 (89%) Strand = Plus / Plus Query: 465 cctctgactggggcaccatccatcagctcaaatttagcaagtgtctcagtctcaacatat 524 ||||| |||||||| |||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 125365 cctctaactggggcgccatccatcagctcaaattttgctagtgtctcagtctcaacgtat 125424 Query: 525 gtgttaggacctgatcctgttgattcccggcggcgaatctcaagctccatgttttttatc 584 ||||| ||||| || ||||| ||||| ||||| |||||||||||||||||||| |||||| Sbjct: 125425 gtgttgggaccagaccctgtagattcacggcgacgaatctcaagctccatgttctttatc 125484 Query: 585 tttattctgactagaagaaaatagatctttcctacaatgacatccttgagatg 637 || |||||||| ||||||||||| |||||||||| |||||||| |||||||| Sbjct: 125485 ttaattctgaccagaagaaaatatatctttcctatgatgacatctttgagatg 125537 Score = 165 bits (83), Expect = 2e-37 Identities = 131/147 (89%) Strand = Plus / Plus Query: 321 tcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtagtac 380 ||||| |||||||| || || |||||||||| || |||||||||||||| ||||||||| Sbjct: 125059 tcttgttgcttgaaatacctgtggtcttcctcatcgacaaggaccaggttcaggtagtac 125118 Query: 381 ttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtcaag 440 |||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||| Sbjct: 125119 ttgacactgaacttgttgtttatgtttcggtaagttggggtaagctcatatggagtcaag 125178 Query: 441 aacagccttactggaatagattctcct 467 || || || |||||||| ||||||||| Sbjct: 125179 aatagtctcactggaatcgattctcct 125205 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 639 tacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 ||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 125635 tacttgcttttgctgtactcaaattcaatatgcaagcaatcttcaa 125680
>gb|DQ200367.1| Solanum tuberosum clone 056D03 vacuolar protein sorting-associated protein 26-like protein mRNA, complete cds Length = 1340 Score = 139 bits (70), Expect = 1e-29 Identities = 187/226 (82%) Strand = Plus / Minus Query: 459 gattctcctctgactggggcaccatccatcagctcaaatttagcaagtgtctcagtctca 518 ||||| ||||||||||| ||||||||||||| |||||| || || || ||||| || ||| Sbjct: 836 gattcacctctgactggagcaccatccatcaactcaaacttggccagcgtctctgtttca 777 Query: 519 acatatgtgttaggacctgatcctgttgattcccggcggcgaatctcaagctccatgttt 578 |||| || || || || ||||||||||| ||||| | ||||||||| |||||||| Sbjct: 776 acatgggtattttccccagaacctgttgattctcggcgtctaatctcaagatccatgttc 717 Query: 579 tttatctttattctgactagaagaaaatagatctttcctacaatgacatccttgagatgg 638 |||||||| ||||| || || |||||||| || ||||||| || ||||| || || || Sbjct: 716 tttatcttaattcttacaaggagaaaatatatttttcctatgataacatctttcaggtga 657 Query: 639 tacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 |||||||||||| ||||||||||||||||||| || |||||||||| Sbjct: 656 tacttgcttttgttgtactcaaactcaatatggaggcaatcttcaa 611
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 137 bits (69), Expect = 5e-29 Identities = 150/177 (84%) Strand = Plus / Minus Query: 465 cctctgactggggcaccatccatcagctcaaatttagcaagtgtctcagtctcaacatat 524 |||||||| || ||||||||||||| |||||| || ||||| || ||||||||||||||| Sbjct: 19100546 cctctgacaggagcaccatccatcaactcaaactttgcaagagtttcagtctcaacatat 19100487 Query: 525 gtgttaggacctgatcctgttgattcccggcggcgaatctcaagctccatgttttttatc 584 | ||| |||| |||||||||||||| || || | || || ||||||||||||||| Sbjct: 19100486 gcactagagcctgctcctgttgattccctacgacgtacttctagttccatgttttttatc 19100427 Query: 585 tttattctgactagaagaaaatagatctttcctacaatgacatccttgagatggtac 641 ||||||||||| |||||||| |||||||| || | ||| |||||||||||||||||| Sbjct: 19100426 tttattctgacaagaagaaagtagatcttcccaataatcacatccttgagatggtac 19100370 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtag 377 |||||||||||||||||||| |||| |||||||| || ||||||||||| || |||||| Sbjct: 19101436 atctcttgctgcttgaagtacctcctatcttcctcatcaacaaggaccagattcaggtag 19101377 Query: 378 tacttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtc 437 |||||||| |||||||||||||||||||| || || | ||||| |||||||| || ||| Sbjct: 19101376 tacttgacgctgaacttgttgtttatgttccgatacgaaggggtcagctcgtaaggcgtc 19101317 Query: 438 aagaacagccttactggaatagattctcct 467 ||||| ||||| || || || ||||||||| Sbjct: 19101316 aagaatagcctcaccgggatggattctcct 19101287 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 639 tacttgcttttgctgtactcaaactcaatatg 670 ||||||||||||||||| || ||||||||||| Sbjct: 19100274 tacttgcttttgctgtattcgaactcaatatg 19100243
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 137 bits (69), Expect = 5e-29 Identities = 150/177 (84%) Strand = Plus / Minus Query: 465 cctctgactggggcaccatccatcagctcaaatttagcaagtgtctcagtctcaacatat 524 |||||||| || ||||||||||||| |||||| || ||||| || ||||||||||||||| Sbjct: 19026773 cctctgacaggagcaccatccatcaactcaaactttgcaagagtttcagtctcaacatat 19026714 Query: 525 gtgttaggacctgatcctgttgattcccggcggcgaatctcaagctccatgttttttatc 584 | ||| |||| |||||||||||||| || || | || || ||||||||||||||| Sbjct: 19026713 gcactagagcctgctcctgttgattccctacgacgtacttctagttccatgttttttatc 19026654 Query: 585 tttattctgactagaagaaaatagatctttcctacaatgacatccttgagatggtac 641 ||||||||||| |||||||| |||||||| || | ||| |||||||||||||||||| Sbjct: 19026653 tttattctgacaagaagaaagtagatcttcccaataatcacatccttgagatggtac 19026597 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtag 377 |||||||||||||||||||| |||| |||||||| || ||||||||||| || |||||| Sbjct: 19027663 atctcttgctgcttgaagtacctcctatcttcctcatcaacaaggaccagattcaggtag 19027604 Query: 378 tacttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtc 437 |||||||| |||||||||||||||||||| || || | ||||| |||||||| || ||| Sbjct: 19027603 tacttgacgctgaacttgttgtttatgttccgatacgaaggggtcagctcgtaaggcgtc 19027544 Query: 438 aagaacagccttactggaatagattctcct 467 ||||| ||||| || || || ||||||||| Sbjct: 19027543 aagaatagcctcaccgggatggattctcct 19027514 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 639 tacttgcttttgctgtactcaaactcaatatg 670 ||||||||||||||||| || ||||||||||| Sbjct: 19026501 tacttgcttttgctgtattcgaactcaatatg 19026470
>emb|AL731746.5|CNS08C7V Oryza sativa chromosome 12, . BAC OSJNBa0039K19 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104289 Score = 137 bits (69), Expect = 5e-29 Identities = 150/177 (84%) Strand = Plus / Minus Query: 465 cctctgactggggcaccatccatcagctcaaatttagcaagtgtctcagtctcaacatat 524 |||||||| || ||||||||||||| |||||| || ||||| || ||||||||||||||| Sbjct: 104077 cctctgacaggagcaccatccatcaactcaaactttgcaagagtttcagtctcaacatat 104018 Query: 525 gtgttaggacctgatcctgttgattcccggcggcgaatctcaagctccatgttttttatc 584 | ||| |||| |||||||||||||| || || | || || ||||||||||||||| Sbjct: 104017 gcactagagcctgctcctgttgattccctacgacgtacttctagttccatgttttttatc 103958 Query: 585 tttattctgactagaagaaaatagatctttcctacaatgacatccttgagatggtac 641 ||||||||||| |||||||| |||||||| || | ||| |||||||||||||||||| Sbjct: 103957 tttattctgacaagaagaaagtagatcttcccaataatcacatccttgagatggtac 103901 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 639 tacttgcttttgctgtactcaaactcaatatg 670 ||||||||||||||||| || ||||||||||| Sbjct: 103805 tacttgcttttgctgtattcgaactcaatatg 103774
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127026 Score = 137 bits (69), Expect = 5e-29 Identities = 150/177 (84%) Strand = Plus / Plus Query: 465 cctctgactggggcaccatccatcagctcaaatttagcaagtgtctcagtctcaacatat 524 |||||||| || ||||||||||||| |||||| || ||||| || ||||||||||||||| Sbjct: 125433 cctctgacaggagcaccatccatcaactcaaactttgcaagagtttcagtctcaacatat 125492 Query: 525 gtgttaggacctgatcctgttgattcccggcggcgaatctcaagctccatgttttttatc 584 | ||| |||| |||||||||||||| || || | || || ||||||||||||||| Sbjct: 125493 gcactagagcctgctcctgttgattccctacgacgtacttctagttccatgttttttatc 125552 Query: 585 tttattctgactagaagaaaatagatctttcctacaatgacatccttgagatggtac 641 ||||||||||| |||||||| |||||||| || | ||| |||||||||||||||||| Sbjct: 125553 tttattctgacaagaagaaagtagatcttcccaataatcacatccttgagatggtac 125609 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtag 377 |||||||||||||||||||| |||| |||||||| || ||||||||||| || |||||| Sbjct: 124543 atctcttgctgcttgaagtacctcctatcttcctcatcaacaaggaccagattcaggtag 124602 Query: 378 tacttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtc 437 |||||||| |||||||||||||||||||| || || | ||||| |||||||| || ||| Sbjct: 124603 tacttgacgctgaacttgttgtttatgttccgatacgaaggggtcagctcgtaaggcgtc 124662 Query: 438 aagaacagccttactggaatagattctcct 467 ||||| ||||| || || || ||||||||| Sbjct: 124663 aagaatagcctcaccgggatggattctcct 124692 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 639 tacttgcttttgctgtactcaaactcaatatg 670 ||||||||||||||||| || ||||||||||| Sbjct: 125705 tacttgcttttgctgtattcgaactcaatatg 125736
>ref|NM_118908.3| Arabidopsis thaliana unknown protein AT4G27690 transcript variant AT4G27690.1 mRNA, complete cds Length = 1185 Score = 111 bits (56), Expect = 3e-21 Identities = 287/364 (78%) Strand = Plus / Minus Query: 321 tcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtagtac 380 ||||||||||||||||||| || || || || || || || || || || || || ||| Sbjct: 999 tcttgctgcttgaagtatcggcgatcctcttcatctaccagtacaagattcagataatac 940 Query: 381 ttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtcaag 440 ||||| ||||| |||||||| |||||||| | || || || || || ||||| | || Sbjct: 939 ttgacgctgaatttgttgttgatgttgcgatgcgttggtgtaagatcatatggggccaga 880 Query: 441 aacagccttactggaatagattctcctctgactggggcaccatccatcagctcaaattta 500 ||||| ||||| || || ||||| ||||| ||||| | |||||||||| ||||||||| Sbjct: 879 aacagtcttacaggtatcgattcacctctaactggagttccatccatcaactcaaatttt 820 Query: 501 gcaagtgtctcagtctcaacatatgtgttaggacctgatcctgttgattcccggcggcga 560 ||||| || || ||||| |||| || |||| ||||| |||||||||||||| || | Sbjct: 819 gcaagagtttctgtctcgacatgagtattagcacctgcacctgttgattcccgccgtctg 760 Query: 561 atctcaagctccatgttttttatctttattctgactagaagaaaatagatctttcctaca 620 |||||||| ||||| || || ||||| ||||| || ||||||||||| || || || | Sbjct: 759 atctcaagatccatattcttcatcttgattctcacaagaagaaaatatattttcccaagg 700 Query: 621 atgacatccttgagatggtacttgcttttgctgtactcaaactcaatatgcagacaatct 680 |||||||| || || || ||||||||||| ||||||||||||| || ||||| ||||| Sbjct: 699 atgacatcttttaggtgatacttgcttttattgtactcaaactcgatgtgcaggcaatcc 640 Query: 681 tcaa 684 |||| Sbjct: 639 tcaa 636
>ref|NM_001036655.1| Arabidopsis thaliana unknown protein AT4G27690 transcript variant AT4G27690.2 mRNA, complete cds Length = 1098 Score = 111 bits (56), Expect = 3e-21 Identities = 287/364 (78%) Strand = Plus / Minus Query: 321 tcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtagtac 380 ||||||||||||||||||| || || || || || || || || || || || || ||| Sbjct: 898 tcttgctgcttgaagtatcggcgatcctcttcatctaccagtacaagattcagataatac 839 Query: 381 ttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtcaag 440 ||||| ||||| |||||||| |||||||| | || || || || || ||||| | || Sbjct: 838 ttgacgctgaatttgttgttgatgttgcgatgcgttggtgtaagatcatatggggccaga 779 Query: 441 aacagccttactggaatagattctcctctgactggggcaccatccatcagctcaaattta 500 ||||| ||||| || || ||||| ||||| ||||| | |||||||||| ||||||||| Sbjct: 778 aacagtcttacaggtatcgattcacctctaactggagttccatccatcaactcaaatttt 719 Query: 501 gcaagtgtctcagtctcaacatatgtgttaggacctgatcctgttgattcccggcggcga 560 ||||| || || ||||| |||| || |||| ||||| |||||||||||||| || | Sbjct: 718 gcaagagtttctgtctcgacatgagtattagcacctgcacctgttgattcccgccgtctg 659 Query: 561 atctcaagctccatgttttttatctttattctgactagaagaaaatagatctttcctaca 620 |||||||| ||||| || || ||||| ||||| || ||||||||||| || || || | Sbjct: 658 atctcaagatccatattcttcatcttgattctcacaagaagaaaatatattttcccaagg 599 Query: 621 atgacatccttgagatggtacttgcttttgctgtactcaaactcaatatgcagacaatct 680 |||||||| || || || ||||||||||| ||||||||||||| || ||||| ||||| Sbjct: 598 atgacatcttttaggtgatacttgcttttattgtactcaaactcgatgtgcaggcaatcc 539 Query: 681 tcaa 684 |||| Sbjct: 538 tcaa 535
>gb|AY122891.1| Arabidopsis thaliana AT4g27690/T29A15_180 mRNA, complete cds Length = 912 Score = 111 bits (56), Expect = 3e-21 Identities = 287/364 (78%) Strand = Plus / Minus Query: 321 tcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtagtac 380 ||||||||||||||||||| || || || || || || || || || || || || ||| Sbjct: 872 tcttgctgcttgaagtatcggcgatcctcttcatctaccagtacaagattcagataatac 813 Query: 381 ttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtcaag 440 ||||| ||||| |||||||| |||||||| | || || || || || ||||| | || Sbjct: 812 ttgacgctgaatttgttgttgatgttgcgatgcgttggtgtaagatcatatggggccaga 753 Query: 441 aacagccttactggaatagattctcctctgactggggcaccatccatcagctcaaattta 500 ||||| ||||| || || ||||| ||||| ||||| | |||||||||| ||||||||| Sbjct: 752 aacagtcttacaggtatcgattcacctctaactggagttccatccatcaactcaaatttt 693 Query: 501 gcaagtgtctcagtctcaacatatgtgttaggacctgatcctgttgattcccggcggcga 560 ||||| || || ||||| |||| || |||| ||||| |||||||||||||| || | Sbjct: 692 gcaagagtttctgtctcgacatgagtattagcacctgcacctgttgattcccgccgtctg 633 Query: 561 atctcaagctccatgttttttatctttattctgactagaagaaaatagatctttcctaca 620 |||||||| ||||| || || ||||| ||||| || ||||||||||| || || || | Sbjct: 632 atctcaagatccatattcttcatcttgattctcacaagaagaaaatatattttcccaagg 573 Query: 621 atgacatccttgagatggtacttgcttttgctgtactcaaactcaatatgcagacaatct 680 |||||||| || || || ||||||||||| ||||||||||||| || ||||| ||||| Sbjct: 572 atgacatcttttaggtgatacttgcttttattgtactcaaactcgatgtgcaggcaatcc 513 Query: 681 tcaa 684 |||| Sbjct: 512 tcaa 509
>gb|AY094409.1| Arabidopsis thaliana AT4g27690/T29A15_180 mRNA, complete cds Length = 1158 Score = 111 bits (56), Expect = 3e-21 Identities = 287/364 (78%) Strand = Plus / Minus Query: 321 tcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtagtac 380 ||||||||||||||||||| || || || || || || || || || || || || ||| Sbjct: 999 tcttgctgcttgaagtatcggcgatcctcttcatctaccagtacaagattcagataatac 940 Query: 381 ttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtcaag 440 ||||| ||||| |||||||| |||||||| | || || || || || ||||| | || Sbjct: 939 ttgacgctgaatttgttgttgatgttgcgatgcgttggtgtaagatcatatggggccaga 880 Query: 441 aacagccttactggaatagattctcctctgactggggcaccatccatcagctcaaattta 500 ||||| ||||| || || ||||| ||||| ||||| | |||||||||| ||||||||| Sbjct: 879 aacagtcttacaggtatcgattcacctctaactggagttccatccatcaactcaaatttt 820 Query: 501 gcaagtgtctcagtctcaacatatgtgttaggacctgatcctgttgattcccggcggcga 560 ||||| || || ||||| |||| || |||| ||||| |||||||||||||| || | Sbjct: 819 gcaagagtttctgtctcgacatgagtattagcacctgcacctgttgattcccgccgtctg 760 Query: 561 atctcaagctccatgttttttatctttattctgactagaagaaaatagatctttcctaca 620 |||||||| ||||| || || ||||| ||||| || ||||||||||| || || || | Sbjct: 759 atctcaagatccatattcttcatcttgattctcacaagaagaaaatatattttcccaagg 700 Query: 621 atgacatccttgagatggtacttgcttttgctgtactcaaactcaatatgcagacaatct 680 |||||||| || || || ||||||||||| ||||||||||||| || ||||| ||||| Sbjct: 699 atgacatcttttaggtgatacttgcttttattgtactcaaactcgatgtgcaggcaatcc 640 Query: 681 tcaa 684 |||| Sbjct: 639 tcaa 636
>gb|BT011888.1| Arabidopsis thaliana At4g27690 mRNA sequence Length = 906 Score = 103 bits (52), Expect = 7e-19 Identities = 286/364 (78%) Strand = Plus / Minus Query: 321 tcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtagtac 380 ||||||||||||||||||| || || || || || || || || || || || || ||| Sbjct: 866 tcttgctgcttgaagtatcggcgatcctcttcatctaccagtacaagattcagataatac 807 Query: 381 ttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtcaag 440 ||||| ||||| |||||||| |||||||| | || || || || || ||||| | || Sbjct: 806 ttgacgctgaatttgttgttgatgttgcgatgcgttggtgtaagatcatatggggccaga 747 Query: 441 aacagccttactggaatagattctcctctgactggggcaccatccatcagctcaaattta 500 ||||| ||||| || || ||||| ||||| ||||| | |||||||||| ||||||||| Sbjct: 746 aacagtcttacaggtatcgattcacctctaactggagttccatccatcaactcaaatttt 687 Query: 501 gcaagtgtctcagtctcaacatatgtgttaggacctgatcctgttgattcccggcggcga 560 ||||| || || ||||| |||| || |||| ||||| |||||||||||||| || | Sbjct: 686 gcaagagtttctgtctcgacatgagtattagcacctgcacctgttgattcccgccgtctg 627 Query: 561 atctcaagctccatgttttttatctttattctgactagaagaaaatagatctttcctaca 620 |||||||| ||||| || || ||||| ||||| || ||||||||||| || || || | Sbjct: 626 atctcaagatccatattcttcatcttgattctcacaagaagaaaatatattttcccaagg 567 Query: 621 atgacatccttgagatggtacttgcttttgctgtactcaaactcaatatgcagacaatct 680 |||||||| || || || ||||||||||| ||||| ||||||| || ||||| ||||| Sbjct: 566 atgacatcttttaggtgatacttgcttttattgtacccaaactcgatgtgcaggcaatcc 507 Query: 681 tcaa 684 |||| Sbjct: 506 tcaa 503
>ref|NM_124733.2| Arabidopsis thaliana unknown protein AT5G53530 mRNA, complete cds Length = 1278 Score = 93.7 bits (47), Expect = 7e-16 Identities = 200/251 (79%) Strand = Plus / Minus Query: 426 tcgtatggagtcaagaacagccttactggaatagattctcctctgactggggcaccatcc 485 |||||||| |||||||||| ||||| || || ||||| ||||| ||||| ||||||||| Sbjct: 904 tcgtatggtgtcaagaacactcttacaggtatcgattcgcctctaactggagcaccatcc 845 Query: 486 atcagctcaaatttagcaagtgtctcagtctcaacatatgtgttaggacctgatcctgtt 545 || | ||||||||| || ||||| || || || || | || |||| |||| ||| ||| Sbjct: 844 attaactcaaatttggctagtgtttctgtttcgacgtgagtattagctcctgctccagtt 785 Query: 546 gattcccggcggcgaatctcaagctccatgttttttatctttattctgactagaagaaaa 605 ||||| || || | |||||||| ||||| || |||||||| ||||| || |||||||| Sbjct: 784 gattctcgccgtcttatctcaagatccatattctttatcttgattctcaccagaagaaag 725 Query: 606 tagatctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactca 665 || || || || | || ||||| || || || ||||||||||| ||||||||||||| Sbjct: 724 tatattttcccaaggataacatcttttaggtgatacttgcttttattgtactcaaactcg 665 Query: 666 atatgcagaca 676 ||||||||||| Sbjct: 664 atatgcagaca 654
>gb|BT011890.1| Arabidopsis thaliana At5g53530 mRNA sequence Length = 906 Score = 93.7 bits (47), Expect = 7e-16 Identities = 200/251 (79%) Strand = Plus / Minus Query: 426 tcgtatggagtcaagaacagccttactggaatagattctcctctgactggggcaccatcc 485 |||||||| |||||||||| ||||| || || ||||| ||||| ||||| ||||||||| Sbjct: 764 tcgtatggtgtcaagaacactcttacaggtatcgattcgcctctaactggagcaccatcc 705 Query: 486 atcagctcaaatttagcaagtgtctcagtctcaacatatgtgttaggacctgatcctgtt 545 || | ||||||||| || ||||| || || || || | || |||| |||| ||| ||| Sbjct: 704 attaactcaaatttggctagtgtttctgtttcgacgtgagtattagctcctgctccagtt 645 Query: 546 gattcccggcggcgaatctcaagctccatgttttttatctttattctgactagaagaaaa 605 ||||| || || | |||||||| ||||| || |||||||| ||||| || |||||||| Sbjct: 644 gattctcgccgtcttatctcaagatccatattctttatcttgattctcaccagaagaaag 585 Query: 606 tagatctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactca 665 || || || || | || ||||| || || || ||||||||||| ||||||||||||| Sbjct: 584 tatattttcccaaggataacatcttttaggtgatacttgcttttattgtactcaaactcg 525 Query: 666 atatgcagaca 676 ||||||||||| Sbjct: 524 atatgcagaca 514
>ref|XM_381331.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG01155.1) partial mRNA Length = 957 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 618 acaatgacatccttgagatggtacttgcttttgctgtactcaaactcaatatgcagaca 676 ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 563 acaataacatccttgagatggtacttgctcttgctgtactcgaactcaatatgcagaca 505
>emb|BX841606.1|CNS09YGS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL68ZB01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1112 Score = 85.7 bits (43), Expect = 2e-13 Identities = 226/287 (78%) Strand = Plus / Minus Query: 321 tcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggtagtac 380 ||||||||||||||||||| || || || || || || || || || || || || ||| Sbjct: 986 tcttgctgcttgaagtatcggcgatcctcttcatctaccagtacaagattcagataatac 927 Query: 381 ttgacactgaacttgttgtttatgttgcggtaagtcggggttagctcgtatggagtcaag 440 ||||| ||||| |||||||| |||||||| | || || || || || ||||| | || Sbjct: 926 ttgacgctgaatttgttgttgatgttgcgatgcgttggtgtaagatcatatggggccaga 867 Query: 441 aacagccttactggaatagattctcctctgactggggcaccatccatcagctcaaattta 500 ||||| ||||| || || ||||| ||||| ||||| | |||||||||| ||||||||| Sbjct: 866 aacagtcttacaggtatcgattcacctctaactggagttccatccatcaactcaaatttt 807 Query: 501 gcaagtgtctcagtctcaacatatgtgttaggacctgatcctgttgattcccggcggcga 560 ||||| || || ||||| |||| || |||| ||||| |||||||||||||| || | Sbjct: 806 gcaagagtttctgtctcgacatgagtattagcacctgcacctgttgattcccgccgtctg 747 Query: 561 atctcaagctccatgttttttatctttattctgactagaagaaaata 607 |||||||| ||||| || || ||||| ||||| || ||||||||||| Sbjct: 746 atctcaagatccatattcttcatcttgattctcacaagaagaaaata 700 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 639 tacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 ||||||||||| ||||||||||||| || ||||| ||||| |||| Sbjct: 583 tacttgcttttattgtactcaaactcgatgtgcaggcaatcctcaa 538
>gb|AY088115.1| Arabidopsis thaliana clone 41458 mRNA, complete sequence Length = 1130 Score = 85.7 bits (43), Expect = 2e-13 Identities = 199/251 (79%) Strand = Plus / Minus Query: 426 tcgtatggagtcaagaacagccttactggaatagattctcctctgactggggcaccatcc 485 |||||||| |||||||||| ||||| || || ||||| ||||| ||||| ||||||||| Sbjct: 874 tcgtatggtgtcaagaacactcttacaggtatcgattcgcctctaactggagcaccatcc 815 Query: 486 atcagctcaaatttagcaagtgtctcagtctcaacatatgtgttaggacctgatcctgtt 545 || | ||||||||| || ||||| || || || || | || |||| | || ||| ||| Sbjct: 814 attaactcaaatttggctagtgtttctgtttcgacgtgagtattagctcatgctccagtt 755 Query: 546 gattcccggcggcgaatctcaagctccatgttttttatctttattctgactagaagaaaa 605 ||||| || || | |||||||| ||||| || |||||||| ||||| || |||||||| Sbjct: 754 gattctcgccgtcttatctcaagatccatattctttatcttgattctcaccagaagaaag 695 Query: 606 tagatctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactca 665 || || || || | || ||||| || || || ||||||||||| ||||||||||||| Sbjct: 694 tatattttcccaaggataacatcttttaggtgatacttgcttttattgtactcaaactcg 635 Query: 666 atatgcagaca 676 ||||||||||| Sbjct: 634 atatgcagaca 624
>emb|BX829000.1|CNS0A2OH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL59ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1055 Score = 83.8 bits (42), Expect = 7e-13 Identities = 180/226 (79%) Strand = Plus / Minus Query: 459 gattctcctctgactggggcaccatccatcagctcaaatttagcaagtgtctcagtctca 518 ||||| ||||| ||||| | |||||||||| ||||||||| ||||| |||| ||||| Sbjct: 798 gattcacctctaactggagttccatccatcaactcaaattttgcaagactctctgtctcg 739 Query: 519 acatatgtgttaggacctgatcctgttgattcccggcggcgaatctcaagctccatgttt 578 |||| || |||| ||||| ||||| |||||||| || | | |||||| ||||| || Sbjct: 738 acatgagtcttagcacctgcacctgtcgattcccgccgtctgacctcaagatccatattc 679 Query: 579 tttatctttattctgactagaagaaaatagatctttcctacaatgacatccttgagatgg 638 || ||||| ||||| || ||||||||||| || || || | |||||||| || || || Sbjct: 678 ttcatcttgattctcacaagaagaaaatatattttcccaaggatgacatcttttaggtga 619 Query: 639 tacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 ||||||||||| ||||||||||||| || ||||| ||||| |||| Sbjct: 618 tacttgcttttattgtactcaaactcgatgtgcaggcaatcctcaa 573
>gb|BC046056.1| Danio rerio vacuolar protein sorting 26 homolog B, mRNA (cDNA clone MGC:56297 IMAGE:5603014), complete cds Length = 2151 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 582 atctttattctgactagaagaaaatagatctttcctacaatgacatccttgagatggtac 641 |||||||| || || ||||| ||||| ||||||||||| || |||||| | | |||||| Sbjct: 883 atctttatcctcacaagaaggaaataaatctttcctacgataacatccctcaagtggtac 824 Query: 642 ttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 ||| |||| |||| |||||||||||||| ||||||||||||| Sbjct: 823 ttggatttgttgtattcaaactcaatatgaagacaatcttcaa 781
>ref|NM_213375.1| Danio rerio vacuolar protein sorting 26 homolog B (vps26b), mRNA Length = 2151 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 582 atctttattctgactagaagaaaatagatctttcctacaatgacatccttgagatggtac 641 |||||||| || || ||||| ||||| ||||||||||| || |||||| | | |||||| Sbjct: 883 atctttatcctcacaagaaggaaataaatctttcctacgataacatccctcaagtggtac 824 Query: 642 ttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 ||| |||| |||| |||||||||||||| ||||||||||||| Sbjct: 823 ttggatttgttgtattcaaactcaatatgaagacaatcttcaa 781
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67 Length = 200001 Score = 71.9 bits (36), Expect = 3e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 480 ccatccatcagctcaaatttagcaagtgtctcagtctcaacatatgtgttaggacctgat 539 |||||||||| ||||||||| ||||| || || ||||| |||| || |||| ||||| Sbjct: 136447 ccatccatcaactcaaattttgcaagagtttctgtctcgacatgagtattagcacctgca 136388 Query: 540 cctgttgattcccggcggcgaatctcaagctccatgttttttatctttattctgactaga 599 |||||||||||||| || | |||||||| ||||| || || ||||| ||||| || ||| Sbjct: 136387 cctgttgattcccgccgtctgatctcaagatccatattcttcatcttgattctcacaaga 136328 Query: 600 agaaaata 607 |||||||| Sbjct: 136327 agaaaata 136320 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 639 tacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 ||||||||||| ||||||||||||| || ||||| ||||| |||| Sbjct: 136203 tacttgcttttattgtactcaaactcgatgtgcaggcaatcctcaa 136158
>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project) Length = 95679 Score = 71.9 bits (36), Expect = 3e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 480 ccatccatcagctcaaatttagcaagtgtctcagtctcaacatatgtgttaggacctgat 539 |||||||||| ||||||||| ||||| || || ||||| |||| || |||| ||||| Sbjct: 75737 ccatccatcaactcaaattttgcaagagtttctgtctcgacatgagtattagcacctgca 75678 Query: 540 cctgttgattcccggcggcgaatctcaagctccatgttttttatctttattctgactaga 599 |||||||||||||| || | |||||||| ||||| || || ||||| ||||| || ||| Sbjct: 75677 cctgttgattcccgccgtctgatctcaagatccatattcttcatcttgattctcacaaga 75618 Query: 600 agaaaata 607 |||||||| Sbjct: 75617 agaaaata 75610 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 639 tacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 ||||||||||| ||||||||||||| || ||||| ||||| |||| Sbjct: 75493 tacttgcttttattgtactcaaactcgatgtgcaggcaatcctcaa 75448
>emb|BX829346.1|CNS0A2L8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 67.9 bits (34), Expect = 4e-08 Identities = 178/226 (78%) Strand = Plus / Minus Query: 459 gattctcctctgactggggcaccatccatcagctcaaatttagcaagtgtctcagtctca 518 ||||| ||||| ||||| | |||||||||| ||||||||| ||||| || || ||||| Sbjct: 838 gattcacctctaactggagtgccatccatcaactcaaattttgcaagagtttctgtctcg 779 Query: 519 acatatgtgttaggacctgatcctgttgattcccggcggcgaatctcaagctccatgttt 578 |||| || |||| ||||| |||||||||||||| || | | |||||| ||||| || Sbjct: 778 acatgagtattagcacctgcacctgttgattcccgccgtctgaactcaagatccatattc 719 Query: 579 tttatctttattctgactagaagaaaatagatctttcctacaatgacatccttgagatgg 638 || ||||| ||| | || ||||||||||| || || || | |||||||| || || || Sbjct: 718 ttcatcttgattatcacaagaagaaaatatattttcccaaggatgacatcttttaggtga 659 Query: 639 tacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 || |||||||| |||||| |||||| || ||||| ||||| |||| Sbjct: 658 taattgcttttattgtactgaaactcgatgtgcaggcaatcctcaa 613
>ref|XM_960035.1| Neurospora crassa OR74A hypothetical protein (NCU02743.1) partial mRNA Length = 984 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 621 atgacatccttgagatggtacttgcttttgctgtactcaaactcaatatgcagaca 676 |||||||||||||| ||||||||||| ||||||||||| || || || |||||||| Sbjct: 560 atgacatccttgaggtggtacttgctcttgctgtactcgaattctatgtgcagaca 505
>ref|XM_331941.1| Neurospora crassa OR74A hypothetical protein (NCU02743.1) partial mRNA Length = 984 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 621 atgacatccttgagatggtacttgcttttgctgtactcaaactcaatatgcagaca 676 |||||||||||||| ||||||||||| ||||||||||| || || || |||||||| Sbjct: 560 atgacatccttgaggtggtacttgctcttgctgtactcgaattctatgtgcagaca 505
>ref|XM_656154.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3642.2), mRNA Length = 1044 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 618 acaatgacatccttgagatggtacttgcttttgctgtactcaaactcaatatgcagacaa 677 ||||| ||||||||||| ||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 566 acaatcacatccttgaggtggtacttggattttgagtactcaaactcaatgtgcagacaa 507 Query: 678 tc 679 || Sbjct: 506 tc 505
>gb|BC070968.1| Xenopus laevis hypothetical protein MGC78773, mRNA (cDNA clone MGC:78773 IMAGE:3400629), complete cds Length = 1885 Score = 56.0 bits (28), Expect = 2e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 585 tttattctgactagaagaaaatagatctttcctacaatgacatccttgagatggtacttg 644 ||||||||||| | |||||| ||||| ||||| ||||||||||| || | ||||||||| Sbjct: 672 tttattctgaccaaaagaaagtagatttttccaacaatgacatctttcaaatggtacttt 613 Query: 645 cttttgctgtactcaaactcaatatgca 672 |||| |||| ||||| || ||||||| Sbjct: 612 gatttgttgtattcaaattctatatgca 585
>ref|NM_004896.3| Homo sapiens vacuolar protein sorting 26 homolog A (yeast) (VPS26A), transcript variant 1, mRNA Length = 2707 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 316 ttatctcttgctgcttgaagtatctccggtcttcctcgtccacaag 361 ||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 1003 ttatctcctgctgtttgaagtacctccggtcttcctcatcaacaag 958 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 agccttactggaatagattctcctctgactggggcaccatccat 487 ||||||| |||||| ||||| ||| | ||||| ||||||||||| Sbjct: 875 agccttattggaattgattcaccttttactggtgcaccatccat 832
>ref|XM_517682.1| PREDICTED: Pan troglodytes similar to vacuolar protein sorting 26; Hbeta58 homolog; vacuolar protein sorting 26 (yeast homolog) (LOC461781), mRNA Length = 1157 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 316 ttatctcttgctgcttgaagtatctccggtcttcctcgtccacaag 361 ||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 927 ttatctcctgctgtttgaagtacctccggtcttcctcatcaacaag 882 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 agccttactggaatagattctcctctgactggggcaccatccat 487 ||||||| |||||| ||||| ||| | ||||| ||||||||||| Sbjct: 799 agccttattggaattgattcaccttttactggtgcaccatccat 756
>gb|BC022505.1| Homo sapiens vacuolar protein sorting 26 homolog A (yeast), mRNA (cDNA clone MGC:26471 IMAGE:4799288), complete cds Length = 2698 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 316 ttatctcttgctgcttgaagtatctccggtcttcctcgtccacaag 361 ||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 989 ttatctcctgctgtttgaagtacctccggtcttcctcatcaacaag 944 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 agccttactggaatagattctcctctgactggggcaccatccat 487 ||||||| |||||| ||||| ||| | ||||| ||||||||||| Sbjct: 861 agccttattggaattgattcaccttttactggtgcaccatccat 818
>ref|NM_001016540.2| Xenopus tropicalis hypothetical protein LOC549294 (LOC549294), mRNA Length = 2666 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 603 aaatagatctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaac 662 ||||| || ||||| ||||||||||| ||||| || || ||| ||| ||||||||||| Sbjct: 726 aaataaatttttcccacaatgacatctttgaggtgatatttggacttgttgtactcaaac 667 Query: 663 tcaatatgcagacaatcttcaa 684 ||||| || |||||||| |||| Sbjct: 666 tcaatgtgaagacaatcctcaa 645 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 453 ggaatagattctcctctgactggggcaccatccat 487 ||||||||||| ||||| ||||| ||||||||||| Sbjct: 876 ggaatagattcccctctcactggtgcaccatccat 842
>gb|BC076820.1| Xenopus laevis MGC83803 protein, mRNA (cDNA clone MGC:83803 IMAGE:6642158), complete cds Length = 2874 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 603 aaatagatctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaac 662 ||||| || ||||| ||||||||||| ||||| || || ||| ||| ||||||||||| Sbjct: 735 aaataaatttttcccacaatgacatctttgaggtgatatttggacttgttgtactcaaac 676 Query: 663 tcaatatgcagacaatcttcaa 684 ||||| || |||||||| |||| Sbjct: 675 tcaatgtgaagacaatcctcaa 654
>gb|BC080016.1| Xenopus laevis MGC82155 protein, mRNA (cDNA clone MGC:82155 IMAGE:7012480), complete cds Length = 2609 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 603 aaatagatctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaac 662 ||||| || ||||| ||||||||||| ||||| || || ||| ||| ||||||||||| Sbjct: 692 aaatatatttttcccacaatgacatctttgaggtgatatttggacttgttgtactcaaac 633 Query: 663 tcaatatgcagacaatcttcaa 684 ||||| || |||||||| |||| Sbjct: 632 tcaatgtgaagacaatcctcaa 611
>emb|CR861348.1| Pongo pygmaeus mRNA; cDNA DKFZp459G2011 (from clone DKFZp459G2011) Length = 2570 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 316 ttatctcttgctgcttgaagtatctccggtcttcctcgtccacaag 361 ||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 857 ttatctcctgctgtttgaagtacctccggtcttcctcatcaacaag 812
>emb|CR626890.8| Zebrafish DNA sequence from clone DKEY-83J7 in linkage group 15, complete sequence Length = 211127 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 647 tttgctgtactcaaactcaatatgcagacaatcttcaa 684 |||| |||| |||||||||||||| ||||||||||||| Sbjct: 22595 tttgttgtattcaaactcaatatgaagacaatcttcaa 22558 Score = 40.1 bits (20), Expect = 9.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 582 atctttattctgactagaagaaaatagatctttcctacaatgacatcc 629 |||||||| || || ||||| ||||| ||||||||||| || |||||| Sbjct: 23174 atctttatcctcacaagaaggaaataaatctttcctacgataacatcc 23127
>emb|BX324206.6| Zebrafish DNA sequence from clone CH211-66O10 in linkage group 15, complete sequence Length = 164638 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 647 tttgctgtactcaaactcaatatgcagacaatcttcaa 684 |||| |||| |||||||||||||| ||||||||||||| Sbjct: 71817 tttgttgtattcaaactcaatatgaagacaatcttcaa 71780 Score = 40.1 bits (20), Expect = 9.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 582 atctttattctgactagaagaaaatagatctttcctacaatgacatcc 629 |||||||| || || ||||| ||||| ||||||||||| || |||||| Sbjct: 72395 atctttatcctcacaagaaggaaataaatctttcctacgataacatcc 72348
>emb|CR618440.1| full-length cDNA clone CS0DI058YO09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 926 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 316 ttatctcttgctgcttgaagtatctccggtcttcctcgtccacaag 361 ||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 380 ttatctcctgctgtttgaagtacctccggtcttcctcatcaacaag 335 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 agccttactggaatagattctcctctgactggggcaccatccat 487 ||||||| |||||| ||||| ||| | ||||| ||||||||||| Sbjct: 252 agccttattggaattgattcaccttttactggtgcaccatccat 209
>emb|CR617214.1| full-length cDNA clone CS0DI084YH16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2498 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 316 ttatctcttgctgcttgaagtatctccggtcttcctcgtccacaag 361 ||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 875 ttatctcctgctgtttgaagtacctccggtcttcctcatcaacaag 830 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 agccttactggaatagattctcctctgactggggcaccatccat 487 ||||||| |||||| ||||| ||| | ||||| ||||||||||| Sbjct: 747 agccttattggaattgattcaccttttactggtgcaccatccat 704
>dbj|AK022992.1| Homo sapiens cDNA FLJ12930 fis, clone NT2RP2004816, highly similar to H58 PROTEIN Length = 2628 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 316 ttatctcttgctgcttgaagtatctccggtcttcctcgtccacaag 361 ||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 932 ttatctcctgctgtttgaagtacctccggtcttcctcatcaacaag 887 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 agccttactggaatagattctcctctgactggggcaccatccat 487 ||||||| |||||| ||||| ||| | ||||| ||||||||||| Sbjct: 804 agccttattggaattgattcaccttttactggtgcaccatccat 761
>gb|BC091021.1| Xenopus tropicalis hypothetical protein LOC549294, mRNA (cDNA clone MGC:107847 IMAGE:7022028), complete cds Length = 2687 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 603 aaatagatctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaac 662 ||||| || ||||| ||||||||||| ||||| || || ||| ||| ||||||||||| Sbjct: 746 aaataaatttttcccacaatgacatctttgaggtgatatttggacttgttgtactcaaac 687 Query: 663 tcaatatgcagacaatcttcaa 684 ||||| || |||||||| |||| Sbjct: 686 tcaatgtgaagacaatcctcaa 665 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 453 ggaatagattctcctctgactggggcaccatccat 487 ||||||||||| ||||| ||||| ||||||||||| Sbjct: 896 ggaatagattcccctctcactggtgcaccatccat 862
>emb|BX649092.1|HSM809243 Homo sapiens mRNA; cDNA DKFZp779H0669 (from clone DKFZp779H0669) Length = 2614 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 316 ttatctcttgctgcttgaagtatctccggtcttcctcgtccacaag 361 ||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 901 ttatctcctgctgtttgaagtacctccggtcttcctcatcaacaag 856 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 agccttactggaatagattctcctctgactggggcaccatccat 487 ||||||| |||||| ||||| ||| | ||||| ||||||||||| Sbjct: 773 agccttattggaattgattcaccttttactggtgcaccatccat 730
>emb|BX647725.1|HSM807871 Homo sapiens mRNA; cDNA DKFZp686H24262 (from clone DKFZp686H24262) Length = 4176 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 316 ttatctcttgctgcttgaagtatctccggtcttcctcgtccacaag 361 ||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 847 ttatctcctgctgtttgaagtacctccggtcttcctcatcaacaag 802 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 agccttactggaatagattctcctctgactggggcaccatccat 487 ||||||| |||||| ||||| ||| | ||||| ||||||||||| Sbjct: 719 agccttattggaattgattcaccttttactggtgcaccatccat 676
>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6 Length = 82952 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 639 tacttgcttttgctgtactcaaactcaatatgcagaca 676 ||||||||||| ||||||||||||| ||||||||||| Sbjct: 33033 tacttgcttttattgtactcaaactcgatatgcagaca 33070 Score = 48.1 bits (24), Expect = 0.038 Identities = 111/140 (79%) Strand = Plus / Plus Query: 465 cctctgactggggcaccatccatcagctcaaatttagcaagtgtctcagtctcaacatat 524 ||||| ||||| ||||||||||| | ||||||||| || ||||| || || || || | Sbjct: 32772 cctctaactggagcaccatccattaactcaaatttggctagtgtttctgtttcgacgtga 32831 Query: 525 gtgttaggacctgatcctgttgattcccggcggcgaatctcaagctccatgttttttatc 584 || |||| |||| ||| |||||||| || || | |||||||| ||||| || |||||| Sbjct: 32832 gtattagctcctgctccagttgattctcgccgtcttatctcaagatccatattctttatc 32891 Query: 585 tttattctgactagaagaaa 604 || ||||| || |||||||| Sbjct: 32892 ttgattctcaccagaagaaa 32911
>emb|CR760763.2| Xenopus tropicalis finished cDNA, clone TTpA009m02 Length = 2666 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 603 aaatagatctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaac 662 ||||| || ||||| ||||||||||| ||||| || || ||| ||| ||||||||||| Sbjct: 726 aaataaatttttcccacaatgacatctttgaggtgatatttggacttgttgtactcaaac 667 Query: 663 tcaatatgcagacaatcttcaa 684 ||||| || |||||||| |||| Sbjct: 666 tcaatgtgaagacaatcctcaa 645 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 453 ggaatagattctcctctgactggggcaccatccat 487 ||||||||||| ||||| ||||| ||||||||||| Sbjct: 876 ggaatagattcccctctcactggtgcaccatccat 842
>gb|AY880355.1| Gekko japonicus GekBS124P mRNA, complete cds Length = 1300 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccag 367 ||||| |||||||||||||| || | ||||||||| || ||||||||||| Sbjct: 937 atctcctgctgcttgaagtaccttctgtcttcctcatcaacaaggaccag 888
>ref|XM_641489.1| Dictyostelium discoideum hypothetical protein (DDB0191205), partial mRNA Length = 1050 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 453 ggaatagattctcctctgactggggcaccatccatcagctcaaatttag 501 ||||||||||| ||||| ||||| ||||||||||| | |||||||||| Sbjct: 743 ggaatagattcacctctaactggtgcaccatccataatttcaaatttag 695
>ref|XM_217099.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2310075A12 (LOC300472), mRNA Length = 3612 Score = 50.1 bits (25), Expect = 0.010 Identities = 76/93 (81%) Strand = Plus / Minus Query: 569 ctccatgttttttatctttattctgactagaagaaaatagatctttcctacaatgacatc 628 |||||||| || ||||| ||||| || || || || |||||||| |||||||||||||| Sbjct: 1090 ctccatgtgcttgatcttgattctcaccagcaggaagtagatcttccctacaatgacatc 1031 Query: 629 cttgagatggtacttgcttttgctgtactcaaa 661 || | ||||||||| |||| |||||||||| Sbjct: 1030 tttcaagtggtacttggatttgttgtactcaaa 998
>ref|XM_316201.2| Anopheles gambiae str. PEST ENSANGP00000017705 (ENSANGG00000015216), partial mRNA Length = 945 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 600 agaaaatagatctttcctacaatgacatccttgagatggtacttgcttttgctgtactca 659 ||||||||||| || || ||||| |||||||| | ||||||||||| ||| ||||||| Sbjct: 584 agaaaatagattttgcccacaatcacatcctttaagtggtacttgctcttgttgtactcg 525 Query: 660 aactc 664 ||||| Sbjct: 524 aactc 520
>gb|U61985.1|DDU61985 Dictyostelium discoideum PepA (pepA) mRNA, complete cds Length = 1321 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 453 ggaatagattctcctctgactggggcaccatccatcagctcaaatttag 501 ||||||||||| ||||| ||||| ||||||||||| | |||||||||| Sbjct: 791 ggaatagattcacctctaactggtgcaccatccataatttcaaatttag 743
>ref|XM_456852.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A12463g) partial mRNA Length = 936 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 653 gtactcaaactcaatatgcagacaatcttcaa 684 |||||||||||||||||| | ||||||||||| Sbjct: 579 gtactcaaactcaatatgtaaacaatcttcaa 548
>ref|NM_178027.3| Mus musculus vacuolar protein sorting 26 homolog B (yeast) (Vps26b), mRNA Length = 3608 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 1014 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 955 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 954 tgcaggcaatcctcaa 939
>ref|XM_844113.1| PREDICTED: Canis familiaris similar to Vacuolar protein sorting 26 homolog (VPS26 protein homolog) (LOC607442), mRNA Length = 1603 Score = 48.1 bits (24), Expect = 0.038 Identities = 57/68 (83%) Strand = Plus / Minus Query: 606 tagatctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactca 665 ||||||||||||||||| ||||| || | ||||| ||| ||| |||||||||||||| Sbjct: 1118 tagatctttcctacaataacatctttcaagtggtatttggatttattgtactcaaactca 1059 Query: 666 atatgcag 673 || ||||| Sbjct: 1058 atgtgcag 1051
>ref|XM_783169.1| PREDICTED: Strongylocentrotus purpuratus similar to Vacuolar protein sorting 26 homolog (VPS26 protein homolog) (LOC583249), mRNA Length = 1032 Score = 48.1 bits (24), Expect = 0.038 Identities = 42/48 (87%) Strand = Plus / Minus Query: 440 gaacagccttactggaatagattctcctctgactggggcaccatccat 487 ||||||||||| || || ||||| ||||| ||||||||||||||||| Sbjct: 792 gaacagccttatgggtatcgattcacctcttactggggcaccatccat 745 Score = 48.1 bits (24), Expect = 0.038 Identities = 42/48 (87%) Strand = Plus / Minus Query: 440 gaacagccttactggaatagattctcctctgactggggcaccatccat 487 ||||||||||| || || ||||| ||||| ||||||||||||||||| Sbjct: 576 gaacagccttatgggtattgattcacctcttactggggcaccatccat 529
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 653 gtactcaaactcaatatgcagacaatcttcaa 684 |||||||||||||||||| | ||||||||||| Sbjct: 1013150 gtactcaaactcaatatgtaaacaatcttcaa 1013181
>dbj|AK150929.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830018G16 product:hypothetical Vacuolar protein sorting-associated protein 26 containing protein, full insert sequence Length = 3526 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 972 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 913 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 912 tgcaggcaatcctcaa 897
>dbj|AK155578.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630330L21 product:Weakly similar to VPS26 protein homolog (RIKEN cDNA 1810012I05) (Hypothetical protein) (Fragment), full insert sequence Length = 3565 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 1012 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 953 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 952 tgcaggcaatcctcaa 937
>dbj|AK165539.1| Mus musculus brain CRL-1443 BC3H1 cDNA, RIKEN full-length enriched library, clone:G430001E19 product:Weakly similar to VPS26 protein homolog (RIKEN cDNA 1810012I05) (Hypothetical protein) (Fragment) homolog [Mus musculus], full insert sequence Length = 2657 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 990 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 931 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 930 tgcaggcaatcctcaa 915
>dbj|AK171154.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630228E13 product:hypothetical Vacuolar protein sorting-associated protein 26 containing protein, full insert sequence Length = 3564 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 1010 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 951 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 950 tgcaggcaatcctcaa 935
>dbj|AK010160.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310075A12 product:weakly similar to VPS26 PROTEIN HOMOLOG (H58 PROTEIN) (H BETA 58) [Mus musculus], full insert sequence Length = 1559 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 985 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 926 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 925 tgcaggcaatcctcaa 910
>dbj|AK031589.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030457A20 product:weakly similar to VPS26 PROTEIN HOMOLOG (H58 PROTEIN) (H BETA 58) [Mus musculus], full insert sequence Length = 3214 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 1054 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 995 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 994 tgcaggcaatcctcaa 979
>gb|AC104472.14| Homo sapiens 3 BAC RP11-674E16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158702 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 ttcctacaatgacatccttgagat 636 |||||||||||||||||||||||| Sbjct: 19368 ttcctacaatgacatccttgagat 19345
>dbj|AK215961.1| Mus musculus cDNA, clone:Y2G0136L21, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000034470, based on BLAT search Length = 399 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 96 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 37 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 36 tgcaggcaatcctcaa 21
>gb|BC062972.1| Mus musculus vacuolar protein sorting 26 homolog B (yeast), mRNA (cDNA clone MGC:79230 IMAGE:6809878), complete cds Length = 3547 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 975 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 916 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 915 tgcaggcaatcctcaa 900
>gb|BC052721.1| Mus musculus vacuolar protein sorting 26 homolog B (yeast), mRNA (cDNA clone MGC:64627 IMAGE:6809853), complete cds Length = 3547 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 975 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 916 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 915 tgcaggcaatcctcaa 900
>gb|BC049180.1| Mus musculus vacuolar protein sorting 26 homolog B (yeast), mRNA (cDNA clone MGC:54784 IMAGE:6314347), complete cds Length = 3608 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 1014 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 955 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 954 tgcaggcaatcctcaa 939
>gb|BC029758.1| Mus musculus vacuolar protein sorting 26 homolog B (yeast), mRNA (cDNA clone IMAGE:3603626), partial cds Length = 1999 Score = 48.1 bits (24), Expect = 0.038 Identities = 63/76 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| |||| |||||||||| ||||| Sbjct: 144 atcttccctacaatgacatctttcaagtggtatttggatttgttgtactcaaattcaatg 85 Query: 669 tgcagacaatcttcaa 684 ||||| ||||| |||| Sbjct: 84 tgcaggcaatcctcaa 69
>gb|BC076639.1| Xenopus laevis vacuolar protein sorting 26 (yeast), mRNA (cDNA clone MGC:78764 IMAGE:3397605), complete cds Length = 2258 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 585 tttattctgactagaagaaaatagatctttcctacaatgacatccttgagatggtactt 643 ||||||||||| | ||||| ||||| ||||| ||||||||||| || || |||||||| Sbjct: 629 tttattctgaccaatagaaagtagatttttccaacaatgacatcttttaggtggtactt 571 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 452 tggaatagattctcctctgactggggcaccatccat 487 |||||||||||| ||| ||||||| || |||||||| Sbjct: 762 tggaatagattcacctttgactggcgctccatccat 727
>ref|XM_362384.1| Magnaporthe grisea 70-15 hypothetical protein (MG04830.4) partial cds Length = 954 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 653 gtactcaaactcaatatgcagacaatc 679 |||||||||||| |||||||||||||| Sbjct: 528 gtactcaaactcgatatgcagacaatc 502
>ref|XM_855882.1| PREDICTED: Canis familiaris similar to vacuolar protein sorting 26, transcript variant 2 (LOC479233), mRNA Length = 1676 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggac 364 ||||| |||||||||||||| || | ||||||||| || |||||||| Sbjct: 972 atctcctgctgcttgaagtaccttctgtcttcctcatcaacaaggac 926
>ref|XM_536375.2| PREDICTED: Canis familiaris similar to vacuolar protein sorting 26, transcript variant 1 (LOC479233), mRNA Length = 1678 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggac 364 ||||| |||||||||||||| || | ||||||||| || |||||||| Sbjct: 974 atctcctgctgcttgaagtaccttctgtcttcctcatcaacaaggac 928
>gb|BC076160.1| Danio rerio zgc:92676, mRNA (cDNA clone MGC:92676 IMAGE:7073806), complete cds Length = 1454 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 570 tccatgttttttatctttattctgactagaagaaaatagatctttcctacaatgacatc 628 ||||||| ||| ||||| ||||| || | ||| |||||||||||||| ||||| ||||| Sbjct: 850 tccatgtgtttgatcttaattctcaccaaaaggaaatagatctttcccacaatcacatc 792
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 654 tactcaaactcaatatgcagaca 676 ||||||||||||||||||||||| Sbjct: 304236 tactcaaactcaatatgcagaca 304258
>ref|NM_001002415.1| Danio rerio zgc:92676 (zgc:92676), mRNA Length = 1454 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 570 tccatgttttttatctttattctgactagaagaaaatagatctttcctacaatgacatc 628 ||||||| ||| ||||| ||||| || | ||| |||||||||||||| ||||| ||||| Sbjct: 850 tccatgtgtttgatcttaattctcaccaaaaggaaatagatctttcccacaatcacatc 792
>emb|AL953846.6| Zebrafish DNA sequence from clone CH211-244D10, complete sequence Length = 153939 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 570 tccatgttttttatctttattctgactagaagaaaatagatctttcctacaatgacatc 628 ||||||| ||| ||||| ||||| || | ||| |||||||||||||| ||||| ||||| Sbjct: 89075 tccatgtgtttgatcttaattctcaccaaaaggaaatagatctttcccacaattacatc 89017
>ref|NM_210036.1| Eremothecium gossypii AEL178Cp (AEL178C), mRNA Length = 924 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 654 tactcaaactcaatatgcagaca 676 ||||||||||||||||||||||| Sbjct: 572 tactcaaactcaatatgcagaca 550
>emb|AJ716204.2| Mesobuthus gibbosus mitochondrion, complete genome Length = 15983 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 602 aaaatagatctttcctacaatga 624 ||||||||||||||||||||||| Sbjct: 7608 aaaatagatctttcctacaatga 7586
>gb|DQ096809.1| Cryptococcus gattii strain R265 mating type alpha locus, complete sequence Length = 120440 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 atctcttgctgcttgaagtatct 340 ||||||||||||||||||||||| Sbjct: 14705 atctcttgctgcttgaagtatct 14727
>emb|AL442635.11| Human DNA sequence from clone RP11-259F16 on chromosome 10 Contains the PRG1 gene for proteoglycan 1, secretory granule (PPG, PRG, SERGLYCIN), the 5' end of the VPS26 gene for vacuolar protein sorting 26 (yeast) (HB58, Hbeta58, FLJ12930), a ribosomal protein S12 (RPS12) pseudogene and a CpG island, complete sequence Length = 143093 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaag 361 ||||| |||||||| |||||||||||||| || ||||| Sbjct: 140824 tgctgtttgaagtacctccggtcttcctcatcaacaag 140787
>gb|AC018659.35| Homo sapiens 12 BAC RP11-528M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178145 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 569 ctccatgttttttatctttatt 590 |||||||||||||||||||||| Sbjct: 69932 ctccatgttttttatctttatt 69953
>gb|AC121304.7| Mus musculus chromosome 3, clone RP24-63C3, complete sequence Length = 192911 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 615 cctacaatgacatccttgaga 635 ||||||||||||||||||||| Sbjct: 180769 cctacaatgacatccttgaga 180789
>ref|XM_508870.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC10485 (LOC451681), mRNA Length = 1028 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 792 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 740 Score = 42.1 bits (21), Expect = 2.4 Identities = 72/89 (80%) Strand = Plus / Minus Query: 588 attctgactagaagaaaatagatctttcctacaatgacatccttgagatggtacttgctt 647 ||||| ||||| || || || ||||| |||||||||||||| || | ||||| ||| | Sbjct: 528 attctcactagcaggaagtatatcttccctacaatgacatctttcaagtggtatttggat 469 Query: 648 ttgctgtactcaaactcaatatgcagaca 676 || |||||||||| ||||| |||||||| Sbjct: 468 ttattgtactcaaattcaatgtgcagaca 440
>ref|XM_520218.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC10485 (LOC464693), mRNA Length = 771 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 482 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 430
>gb|BC007148.1| Mus musculus vacuolar protein sorting 26 (yeast), mRNA (cDNA clone MGC:6592 IMAGE:3485844), complete cds Length = 2535 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 941 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 889
>ref|NM_001007740.1| Rattus norvegicus vacuolar protein sorting 26 (yeast) (Vps26), mRNA Length = 1292 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 652 tgtactcaaactcaatatgcagacaatcttcaa 684 ||||||||||||| || |||||||| ||||||| Sbjct: 622 tgtactcaaactctatgtgcagacagtcttcaa 590
>gb|BC079150.1| Rattus norvegicus vacuolar protein sorting 26 (yeast), mRNA (cDNA clone MGC:94168 IMAGE:7128580), complete cds Length = 1292 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 652 tgtactcaaactcaatatgcagacaatcttcaa 684 ||||||||||||| || |||||||| ||||||| Sbjct: 622 tgtactcaaactctatgtgcagacagtcttcaa 590
>gb|BC058236.1| Mus musculus vacuolar protein sorting 26 (yeast), mRNA (cDNA clone IMAGE:6307366), complete cds Length = 2314 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 706 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 654
>gb|BC098386.1| Homo sapiens vacuolar protein sorting 26 homolog B (S. cerevisiae), mRNA (cDNA clone MGC:104580 IMAGE:30527559), complete cds Length = 3747 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 1382 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 1330 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| ||| |||||||||| ||||| Sbjct: 1097 atcttccctacaatgacatctttcaagtggtatttggatttattgtactcaaattcaatg 1038 Query: 669 tgcagaca 676 |||||||| Sbjct: 1037 tgcagaca 1030
>gb|BC009747.2| Homo sapiens vacuolar protein sorting 26 homolog B (S. cerevisiae), mRNA (cDNA clone MGC:10485 IMAGE:3938319), complete cds Length = 1588 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 1297 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 1245 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| ||| |||||||||| ||||| Sbjct: 1012 atcttccctacaatgacatctttcaagtggtatttggatttattgtactcaaattcaatg 953 Query: 669 tgcagaca 676 |||||||| Sbjct: 952 tgcagaca 945
>gb|BC014128.2| Homo sapiens vacuolar protein sorting 26 homolog B (S. cerevisiae), mRNA (cDNA clone MGC:20744 IMAGE:4580029), complete cds Length = 1617 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 1306 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 1254 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| ||| |||||||||| ||||| Sbjct: 1021 atcttccctacaatgacatctttcaagtggtatttggatttattgtactcaaattcaatg 962 Query: 669 tgcagaca 676 |||||||| Sbjct: 961 tgcagaca 954
>gb|BC013255.1| Homo sapiens vacuolar protein sorting 26 homolog B (S. cerevisiae), mRNA (cDNA clone IMAGE:3871805) Length = 2942 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 582 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 530 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| ||| |||||||||| ||||| Sbjct: 297 atcttccctacaatgacatctttcaagtggtatttggatttattgtactcaaattcaatg 238 Query: 669 tgcagaca 676 |||||||| Sbjct: 237 tgcagaca 230
>ref|NM_052875.3| Homo sapiens vacuolar protein sorting 26 homolog B (S. cerevisiae) (VPS26B), mRNA Length = 3685 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 1319 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 1267 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| ||| |||||||||| ||||| Sbjct: 1034 atcttccctacaatgacatctttcaagtggtatttggatttattgtactcaaattcaatg 975 Query: 669 tgcagaca 676 |||||||| Sbjct: 974 tgcagaca 967
>emb|CR861424.1| Pongo pygmaeus mRNA; cDNA DKFZp459P062 (from clone DKFZp459P062) Length = 3347 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 904 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 852 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| ||| |||||||||| ||||| Sbjct: 619 atcttccctacaatgacatctttcaagtggtatttggatttattgtactcaaattcaatg 560 Query: 669 tgcagaca 676 |||||||| Sbjct: 559 tgcagaca 552
>emb|BX469889.7| Zebrafish DNA sequence from clone DKEY-156P3 in linkage group 18, complete sequence Length = 177975 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 585 tttattctgactagaagaaaa 605 ||||||||||||||||||||| Sbjct: 149237 tttattctgactagaagaaaa 149257
>emb|CR625768.1| full-length cDNA clone CS0DI054YP23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1497 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 1298 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 1246 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| ||| |||||||||| ||||| Sbjct: 1013 atcttccctacaatgacatctttcaagtggtatttggatttattgtactcaaattcaatg 954 Query: 669 tgcagaca 676 |||||||| Sbjct: 953 tgcagaca 946
>emb|CR621034.1| full-length cDNA clone CS0DJ014YI18 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1572 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 1317 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 1265 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| ||| |||||||||| ||||| Sbjct: 1032 atcttccctacaatgacatctttcaagtggtatttggatttattgtactcaaattcaatg 973 Query: 669 tgcagaca 676 |||||||| Sbjct: 972 tgcagaca 965
>emb|CR610089.1| full-length cDNA clone CS0DC003YF05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1542 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 1287 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 1235 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| ||| |||||||||| ||||| Sbjct: 1002 atcttccctacaatgacatctttcaagtggtatttggatttattgtactcaaattcaatg 943 Query: 669 tgcagaca 676 |||||||| Sbjct: 942 tgcagaca 935
>dbj|AK149859.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530023N10 product:vacuolar protein sorting 26 (yeast), full insert sequence Length = 2315 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 945 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 893
>dbj|AK147989.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270128M13 product:vacuolar protein sorting 26 (yeast), full insert sequence Length = 3049 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 961 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 909
>dbj|AK152424.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830071F18 product:vacuolar protein sorting 26 (yeast), full insert sequence Length = 2536 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 964 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 912
>dbj|AK151360.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830028I15 product:vacuolar protein sorting 26 (yeast), full insert sequence Length = 2504 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 930 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 878
>dbj|AK150244.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530147I06 product:vacuolar protein sorting 26 (yeast), full insert sequence Length = 2491 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 918 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 866
>dbj|AK167592.1| Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530024F08 product:vacuolar protein sorting 26 (yeast), full insert sequence Length = 2552 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 975 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 923
>dbj|AK159783.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420031A19 product:vacuolar protein sorting 26 (yeast), full insert sequence Length = 2542 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 970 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 918
>dbj|AK168537.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920030G15 product:vacuolar protein sorting 26 (yeast), full insert sequence Length = 2548 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 975 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 923
>dbj|AK168213.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730067C18 product:vacuolar protein sorting 26 (yeast), full insert sequence Length = 2597 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 1020 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 968
>dbj|AK165853.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730007H05 product:vacuolar protein sorting 26 (yeast), full insert sequence Length = 2583 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 964 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 912
>gb|S41204.1| H beta 58=essential for embryogenesis [mice, embryo, mRNA, 2560 nt] Length = 2560 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 967 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 915
>gb|AF452718.1| Homo sapiens clone KU002852 unknown mRNA Length = 1607 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 1319 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 1267 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 609 atctttcctacaatgacatccttgagatggtacttgcttttgctgtactcaaactcaata 668 ||||| |||||||||||||| || | ||||| ||| ||| |||||||||| ||||| Sbjct: 1034 atcttccctacaatgacatctttcaagtggtatttggatttattgtactcaaattcaatg 975 Query: 669 tgcagaca 676 |||||||| Sbjct: 974 tgcagaca 967
>dbj|AK028096.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700109A21 product:vacuolar protein sorting 26 (yeast), full insert sequence Length = 2713 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 1094 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 1042
>ref|NM_133672.1| Mus musculus vacuolar protein sorting 26 (yeast) (Vps26), mRNA Length = 2560 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 atctcttgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggtt 370 ||||| |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 967 atctcctgctgcttgaagtaccttcggtcctcctcatcaacaagcacgaggtt 915
>dbj|BS000043.1| Pan troglodytes chromosome 22 clone:RP43-169N06, map 22, complete sequences Length = 189421 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 596 tagaagaaaatagatctttcc 616 ||||||||||||||||||||| Sbjct: 69018 tagaagaaaatagatctttcc 68998
>gb|AC115018.7| Mus musculus chromosome 3, clone RP24-221D2, complete sequence Length = 164720 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 615 cctacaatgacatccttgaga 635 ||||||||||||||||||||| Sbjct: 6602 cctacaatgacatccttgaga 6622
>dbj|AP000859.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-17I22, complete sequences Length = 118455 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 324 tgctgcttgaagtatctccggtcttcctcgtccacaaggaccaggttgaggta 376 |||||||||||||| | ||| || |||||||| | || |||||||||||||| Sbjct: 20435 tgctgcttgaagtagcgccgctcctcctcgtctatcagcaccaggttgaggta 20383
>gb|AY454535.1| Bartonella sp. ma106up FtsZ (ftsZ) gene, partial cds Length = 711 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 638 gtacttgcttttgctgtact 657 |||||||||||||||||||| Sbjct: 485 gtacttgcttttgctgtact 466
>gb|AC140383.2| Mus musculus BAC clone RP24-212K17 from chromosome 9, complete sequence Length = 183315 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 cacgattcaggccaggttcc 264 |||||||||||||||||||| Sbjct: 177340 cacgattcaggccaggttcc 177359
>emb|CR354584.8| Zebrafish DNA sequence from clone DKEY-7B6 in linkage group 12, complete sequence Length = 218091 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 actgaacttgttgtttatgt 405 |||||||||||||||||||| Sbjct: 51804 actgaacttgttgtttatgt 51785
>emb|CR450737.4| Zebrafish DNA sequence from clone CH211-167D24 in linkage group 12, complete sequence Length = 156532 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 actgaacttgttgtttatgt 405 |||||||||||||||||||| Sbjct: 128753 actgaacttgttgtttatgt 128772
>gb|AC122260.3| Mus musculus BAC clone RP23-185M15 from 6, complete sequence Length = 203877 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 ttttttatctttattctgac 595 |||||||||||||||||||| Sbjct: 77380 ttttttatctttattctgac 77361
>ref|XM_668785.1| Plasmodium berghei strain ANKA Hbeta58/Vps26 protein, (PB300566.00.0) partial mRNA Length = 474 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 570 tccatgttttttatctttattctgacta 597 ||||||| |||||| ||||||||||||| Sbjct: 194 tccatgtgttttatttttattctgacta 167
>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland Research Institute) complete sequence Length = 184149 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 gaacatgtttatctcttgct 327 |||||||||||||||||||| Sbjct: 178480 gaacatgtttatctcttgct 178461
>gb|AC110682.6| Rattus norvegicus 18 BAC CH230-197I20 (Children's Hospital Oakland Research Institute) complete sequence Length = 166696 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 tatgaaggctgtggaatttc 298 |||||||||||||||||||| Sbjct: 68620 tatgaaggctgtggaatttc 68639
>gb|AY193843.1| Mastigamoeba balamuthi vacuolar protein sorting 26-like (Vps26) gene, partial cds Length = 279 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 627 tccttgagatggtacttgcttttgctgtactc 658 |||||||| ||||||||||| ||| ||||||| Sbjct: 33 tccttgaggtggtacttgctcttgttgtactc 2
>ref|XM_503205.1| Yarrowia lipolytica CLIB122, YALI0D23793g predicted mRNA Length = 903 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 653 gtactcaaactcaatatgcagaca 676 ||||||||||||||| |||||||| Sbjct: 549 gtactcaaactcaatgtgcagaca 526
>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227849 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gaacatgtttatctcttgct 327 |||||||||||||||||||| Sbjct: 147415 gaacatgtttatctcttgct 147434
>emb|AL353574.8| Human DNA sequence from clone RP11-551M18 on chromosome 13 Contains the 5' end of the SLC15A1 gene for solute carrier family 15 (oligopeptide transporter) member 1 and a CpG island, complete sequence Length = 89515 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 atgaaggctgtggaatttcgtcaa 303 ||||||||||| |||||||||||| Sbjct: 47702 atgaaggctgttgaatttcgtcaa 47679
>gb|AC130003.3| Homo sapiens 3 BAC RP11-705F7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129812 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gaaaatgaaaatggtcaaaa 89 |||||||||||||||||||| Sbjct: 30522 gaaaatgaaaatggtcaaaa 30541
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 cctgatcctgttgattcccg 553 |||||||||||||||||||| Sbjct: 23009 cctgatcctgttgattcccg 23028
>gb|AC026347.17| Homo sapiens 3 BAC RP11-362A9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195430 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gaaaatgaaaatggtcaaaa 89 |||||||||||||||||||| Sbjct: 35248 gaaaatgaaaatggtcaaaa 35229
>dbj|AK093778.1| Homo sapiens cDNA FLJ36459 fis, clone THYMU2014762 Length = 1939 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gaaaatgaaaatggtcaaaa 89 |||||||||||||||||||| Sbjct: 1349 gaaaatgaaaatggtcaaaa 1330
>gb|AC108103.2| Homo sapiens chromosome 5 clone RP11-197O8, complete sequence Length = 151884 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 tccatgttttttatctttat 589 |||||||||||||||||||| Sbjct: 20524 tccatgttttttatctttat 20543
>gb|AC093371.6| Genomic sequence for Mus musculus, clone RP23-36P10, complete sequence Length = 177872 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gaacatgtttatctcttgct 327 |||||||||||||||||||| Sbjct: 128633 gaacatgtttatctcttgct 128652
>ref|XM_684899.1| PREDICTED: Danio rerio similar to Tmc5 protein (LOC561497), mRNA Length = 2065 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 agtgattgtatccaaaccag 128 |||||||||||||||||||| Sbjct: 703 agtgattgtatccaaaccag 722
>emb|BX470132.6| Zebrafish DNA sequence from clone DKEY-202L16 in linkage group 3, complete sequence Length = 163404 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 agtgattgtatccaaaccag 128 |||||||||||||||||||| Sbjct: 1206 agtgattgtatccaaaccag 1225
>gb|AC090513.3| Homo sapiens chromosome 15 clone RP11-213B23 map 15q15, complete sequence Length = 161867 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 atgaaggctgtggaatttcgtcaa 303 ||||||||||| |||||||||||| Sbjct: 29105 atgaaggctgttgaatttcgtcaa 29082
>dbj|AK040512.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430104F18 product:unclassifiable, full insert sequence Length = 3227 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 gaacatgtttatctcttgct 327 |||||||||||||||||||| Sbjct: 3039 gaacatgtttatctcttgct 3020
>gb|AC090516.3| Homo sapiens chromosome 15 clone RP11-319G10 map 15q15, complete sequence Length = 161958 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 atgaaggctgtggaatttcgtcaa 303 ||||||||||| |||||||||||| Sbjct: 89560 atgaaggctgttgaatttcgtcaa 89537
>gb|AF054179.1|AF054179 Homo sapiens H beta 58 homolog mRNA, complete cds Length = 2669 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 agccttactggaatagattctcctctgactggggcaccatccat 487 ||||||| |||||| ||||| ||| | ||||| ||||||||||| Sbjct: 828 agccttattggaattgattcaccttttactggtgcaccatccat 785
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 actgcactgcatgctctcct 193 |||||||||||||||||||| Sbjct: 42936041 actgcactgcatgctctcct 42936060
>gb|AF296100.1|AF296100 Porcine teschovirus strain DS 562/91 polyprotein gene, complete cds Length = 7008 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cttgacactgaacttgttgt 399 |||||||||||||||||||| Sbjct: 2701 cttgacactgaacttgttgt 2720
>gb|AC096735.3| Homo sapiens BAC clone RP11-135M12 from 4, complete sequence Length = 193510 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 tttttatctttattctgact 596 |||||||||||||||||||| Sbjct: 28232 tttttatctttattctgact 28251
>gb|AF175266.1|AF175266 Homo sapiens vacuolar sorting protein 26 (VPS26) mRNA, complete cds Length = 2669 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 agccttactggaatagattctcctctgactggggcaccatccat 487 ||||||| |||||| ||||| ||| | ||||| ||||||||||| Sbjct: 828 agccttattggaattgattcaccttttactggtgcaccatccat 785
>gb|AC012073.9| Homo sapiens BAC clone RP11-443B20 from 2, complete sequence Length = 153792 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 tgttttttatctttattctg 593 |||||||||||||||||||| Sbjct: 70848 tgttttttatctttattctg 70829
>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698H10 Length = 153449 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 actgcactgcatgctctcct 193 |||||||||||||||||||| Sbjct: 36920 actgcactgcatgctctcct 36939
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 actgcactgcatgctctcct 193 |||||||||||||||||||| Sbjct: 129775 actgcactgcatgctctcct 129794
>gb|AF250284.1|AF250284 Amsacta moorei entomopoxvirus, complete genome Length = 232392 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 catgttttttatctttattc 591 |||||||||||||||||||| Sbjct: 134038 catgttttttatctttattc 134019
>gb|AC009960.10| Homo sapiens BAC clone RP11-354N12 from 2, complete sequence Length = 207983 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cagattgctatggaaaaggc 145 |||||||||||||||||||| Sbjct: 16515 cagattgctatggaaaaggc 16496
>gb|AC160944.2| Pan troglodytes BAC clone CH251-7D22 from chromosome unknown, complete sequence Length = 191791 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 atgaaggctgtggaatttcgtcaa 303 ||||||||||| |||||||||||| Sbjct: 90879 atgaaggctgttgaatttcgtcaa 90856
>emb|CR847568.13| Zebrafish DNA sequence from clone DKEYP-74C2 in linkage group 3, complete sequence Length = 173689 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 agtgattgtatccaaaccag 128 |||||||||||||||||||| Sbjct: 172895 agtgattgtatccaaaccag 172914
>emb|AL109847.5|CNS018P0 Human chromosome 14 DNA sequence BAC R-603H7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 186158 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 aatagattctcctctgactg 474 |||||||||||||||||||| Sbjct: 133558 aatagattctcctctgactg 133539
>gb|AC174646.2| Mus musculus BAC clone RP23-9P6 from chromosome 9, complete sequence Length = 199765 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 cacgattcaggccaggttcc 264 |||||||||||||||||||| Sbjct: 165422 cacgattcaggccaggttcc 165441
>dbj|AK114134.1| Ciona intestinalis cDNA, clone:cicl031k05, full insert sequence Length = 1692 Score = 40.1 bits (20), Expect = 9.4 Identities = 50/60 (83%) Strand = Plus / Minus Query: 625 catccttgagatggtacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 |||||||||| || ||||| |||| |||| || || |||||||| ||||||||||||| Sbjct: 656 catccttgaggtgatacttttgtttgttgtattcgaattcaatatgaagacaatcttcaa 597
>dbj|AK113003.1| Ciona intestinalis cDNA, clone:cieg011m23, full insert sequence Length = 1525 Score = 40.1 bits (20), Expect = 9.4 Identities = 50/60 (83%) Strand = Plus / Minus Query: 625 catccttgagatggtacttgcttttgctgtactcaaactcaatatgcagacaatcttcaa 684 |||||||||| || ||||| |||| |||| || || |||||||| ||||||||||||| Sbjct: 660 catccttgaggtgatacttttgtttgttgtattcgaattcaatatgaagacaatcttcaa 601
>gb|AC161760.4| Mus musculus BAC clone RP23-428J22 from chromosome 14, complete sequence Length = 187639 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 atgttttttatctttattct 592 |||||||||||||||||||| Sbjct: 121091 atgttttttatctttattct 121072
>gb|U32177.1|MMU32177 Mus musculus type VII collagen gene, complete cds Length = 31771 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cacgattcaggccaggttcc 264 |||||||||||||||||||| Sbjct: 76 cacgattcaggccaggttcc 57
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 653 gtactcaaactcaatatgcagaca 676 ||||||||||||||| |||||||| Sbjct: 3099963 gtactcaaactcaatgtgcagaca 3099986
>emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chromosome 2, complete sequence Length = 183985 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 aaaccagattgctatggaaa 141 |||||||||||||||||||| Sbjct: 90995 aaaccagattgctatggaaa 91014 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,921,767 Number of Sequences: 3902068 Number of extensions: 5921767 Number of successful extensions: 109320 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 108810 Number of HSP's gapped (non-prelim): 506 length of query: 684 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 661 effective length of database: 17,143,297,704 effective search space: 11331719782344 effective search space used: 11331719782344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
