ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482956.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
3dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
4gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster 46 0.15
5ref|XM_477103.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.58
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
7dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.58
8dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
9dbj|AK120944.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.58
10dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.58
11gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 2.3
12ref|XM_362484.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.3
13gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 2.3
14gb|AC145802.2| Xenopus tropicalis clone CH216-80C17, complete se... 42 2.3
15emb|AL606754.6| Human DNA sequence from clone RP11-479E16 on chr... 42 2.3
16emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 2.3
17dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 2.3
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
19dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 2.3
20dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
21dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
22emb|AJ007559.1|CRE7559 Chlamydomonas reinhardtii mRNA for 1-deox... 42 2.3
23ref|XM_566224.1| Anopheles gambiae str. PEST ENSANGP00000026283 ... 42 2.3
24ref|XM_310956.2| Anopheles gambiae str. PEST ENSANGP00000019430 ... 42 2.3
25gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 2.3
26gb|AC152976.1| Mus musculus BAC RP23-103K17 (Roswell Park Cance... 40 9.1
27gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 9.1
28gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 9.1
29gb|AC115767.14| Mus musculus chromosome 6, clone RP23-83K15, com... 40 9.1
30gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
31gb|AC102668.12| Mus musculus chromosome 6, clone RP23-296I18, co... 40 9.1
32gb|AC122395.4| Mus musculus BAC clone RP24-86H17 from chromosome... 40 9.1
33gb|DQ462412.1| Spinibarbus sinensis neuropeptide Y mRNA, complet... 40 9.1
34ref|XM_739811.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 9.1
35emb|BX016260.1|CNS08KPK Single read from an extremity of a full-... 40 9.1
36emb|BX119976.8| Zebrafish DNA sequence from clone CH211-196F5 in... 40 9.1
37emb|CR762418.5| Zebrafish DNA sequence from clone RP71-15A9 in l... 40 9.1
38gb|AC107960.3| Homo sapiens chromosome 8, clone RP11-983C19, com... 40 9.1
39gb|AC107870.6| Homo sapiens chromosome 8, clone CTC-777N14, comp... 40 9.1
40gb|AC099818.2| Homo sapiens chromosome 8, clone RP11-99I9, compl... 40 9.1
41gb|DQ380626.1| Environmental sequence clone W1-9 arsenite oxidas... 40 9.1
42ref|NM_131074.1| Danio rerio neuropeptide Y (npy), mRNA 40 9.1
43gb|CP000249.1| Frankia sp. CcI3, complete genome 40 9.1
44dbj|AK086176.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 9.1
45dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
46dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 9.1
47gb|AC098645.3| Papio anubis clone RP41-470J23, complete sequence 40 9.1
48gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 9.1
49gb|AF287347.1|AF287347 Cyprinus carpio neuropeptide Y mRNA, comp... 40 9.1
50gb|AF233874.1|AF233874 Danio rerio neuropeptide Y precursor gene... 40 9.1
51emb|BX640495.10| Zebrafish DNA sequence from clone CH211-107H7 i... 40 9.1
52gb|AE005103.1| Halobacterium sp. NRC-1 section 134 of 170 of the... 40 9.1
53emb|BX640464.10| Zebrafish DNA sequence from clone DKEY-22M8 in ... 40 9.1
54emb|BX510657.9| Zebrafish DNA sequence from clone CH211-142K18 i... 40 9.1
55dbj|AP005661.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 9.1
56emb|AL645911.14| Mouse DNA sequence from clone RP23-25M3 on chro... 40 9.1
57gb|M87297.1|CRANPY Carassius auratus neuropeptide Y mRNA, comple... 40 9.1 
>ref|XM_482956.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1218

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 158/196 (80%)
 Strand = Plus / Minus

                                                                        
Query: 221  ggcgtcggcggcgctcatcggagagctgccttgcgtacttggcgagctcctccgcgtttg 280
            |||| ||||| ||||| |||||||||||| ||||| ||||||| ||||  ||   ||| |
Sbjct: 1198 ggcgccggcgccgctcgtcggagagctgctttgcgaacttggcaagctgatctctgttcg 1139

                                                                        
Query: 281  tgcctccaccgggcacctccacattccggccggtctccaggtccaccccggacaccttct 340
            ||||| | |||| ||| ||||| |   |||||||||||||||| || |  || || ||||
Sbjct: 1138 tgccttcgccggccacatccacgtaatggccggtctccaggtctactcgtgagacgttct 1079

                                                                        
Query: 341  cggcgagaagctcatccccaatcttcaccaacctatccaagttggccttggagcagtcgt 400
             | ||||||||   ||||||||||||||||   |||||| |||  |||||||||||||||
Sbjct: 1078 tgtcgagaagcatttccccaatcttcaccaggttatccatgttttccttggagcagtcgt 1019

                            
Query: 401  cgatggagcccgcact 416
            |||| |||||||||||
Sbjct: 1018 cgatcgagcccgcact 1003



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 551 ccttgacgagccagctcaagatgccccacttggcggcgtccttggc 596
           |||||| ||||||| | ||||| ||||||||||| |||||||||||
Sbjct: 868 ccttgatgagccagttgaagattccccacttggcagcgtccttggc 823
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 158/196 (80%)
 Strand = Plus / Plus

                                                                            
Query: 221      ggcgtcggcggcgctcatcggagagctgccttgcgtacttggcgagctcctccgcgtttg 280
                |||| ||||| ||||| |||||||||||| ||||| ||||||| ||||  ||   ||| |
Sbjct: 23538537 ggcgccggcgccgctcgtcggagagctgctttgcgaacttggcaagctgatctctgttcg 23538596

                                                                            
Query: 281      tgcctccaccgggcacctccacattccggccggtctccaggtccaccccggacaccttct 340
                ||||| | |||| ||| ||||| |   |||||||||||||||| || |  || || ||||
Sbjct: 23538597 tgccttcgccggccacatccacgtaatggccggtctccaggtctactcgtgagacgttct 23538656

                                                                            
Query: 341      cggcgagaagctcatccccaatcttcaccaacctatccaagttggccttggagcagtcgt 400
                 | ||||||||   ||||||||||||||||   |||||| |||  |||||||||||||||
Sbjct: 23538657 tgtcgagaagcatttccccaatcttcaccaggttatccatgttttccttggagcagtcgt 23538716

                                
Query: 401      cgatggagcccgcact 416
                |||| |||||||||||
Sbjct: 23538717 cgatcgagcccgcact 23538732



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 551      ccttgacgagccagctcaagatgccccacttggcggcgtccttggc 596
                |||||| ||||||| | ||||| ||||||||||| |||||||||||
Sbjct: 23539315 ccttgatgagccagttgaagattccccacttggcagcgtccttggc 23539360



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 351      ctcatccccaatcttcaccaa 371
                |||||||||||||||||||||
Sbjct: 26302374 ctcatccccaatcttcaccaa 26302394
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>dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1666_A04
          Length = 90097

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 158/196 (80%)
 Strand = Plus / Plus

                                                                         
Query: 221   ggcgtcggcggcgctcatcggagagctgccttgcgtacttggcgagctcctccgcgtttg 280
             |||| ||||| ||||| |||||||||||| ||||| ||||||| ||||  ||   ||| |
Sbjct: 18312 ggcgccggcgccgctcgtcggagagctgctttgcgaacttggcaagctgatctctgttcg 18371

                                                                         
Query: 281   tgcctccaccgggcacctccacattccggccggtctccaggtccaccccggacaccttct 340
             ||||| | |||| ||| ||||| |   |||||||||||||||| || |  || || ||||
Sbjct: 18372 tgccttcgccggccacatccacgtaatggccggtctccaggtctactcgtgagacgttct 18431

                                                                         
Query: 341   cggcgagaagctcatccccaatcttcaccaacctatccaagttggccttggagcagtcgt 400
              | ||||||||   ||||||||||||||||   |||||| |||  |||||||||||||||
Sbjct: 18432 tgtcgagaagcatttccccaatcttcaccaggttatccatgttttccttggagcagtcgt 18491

                             
Query: 401   cgatggagcccgcact 416
             |||| |||||||||||
Sbjct: 18492 cgatcgagcccgcact 18507



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 551   ccttgacgagccagctcaagatgccccacttggcggcgtccttggc 596
             |||||| ||||||| | ||||| ||||||||||| |||||||||||
Sbjct: 19090 ccttgatgagccagttgaagattccccacttggcagcgtccttggc 19135
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>gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster
          Length = 162249

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 490   tggaagtcgaccatgtcggcgctggcg 516
             |||| ||||||||||||||||||||||
Sbjct: 73766 tggatgtcgaccatgtcggcgctggcg 73740
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>ref|XM_477103.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2292

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 506  cggcgctggcggcgttgaacatgtcgagga 535
            |||||| | |||||||||||||||||||||
Sbjct: 2077 cggcgccgccggcgttgaacatgtcgagga 2048
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 506     cggcgctggcggcgttgaacatgtcgagga 535
               |||||| | |||||||||||||||||||||
Sbjct: 5923248 cggcgccgccggcgttgaacatgtcgagga 5923277
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 468     gatggcggagaggacggagagg 489
               ||||||||||||||||||||||
Sbjct: 3671790 gatggcggagaggacggagagg 3671811
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>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_A05
          Length = 120823

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 506   cggcgctggcggcgttgaacatgtcgagga 535
             |||||| | |||||||||||||||||||||
Sbjct: 65696 cggcgccgccggcgttgaacatgtcgagga 65725
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>dbj|AK120944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N02, full
            insert sequence
          Length = 2827

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 506  cggcgctggcggcgttgaacatgtcgagga 535
            |||||| | |||||||||||||||||||||
Sbjct: 2307 cggcgccgccggcgttgaacatgtcgagga 2278
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 620   gatgatgtcccgcagccgatgg 641
             ||||||||||||||||||||||
Sbjct: 36089 gatgatgtcccgcagccgatgg 36068
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 579     cttggcggcgtccttggcgctgtac 603
               |||| ||||||||||||||||||||
Sbjct: 2306056 cttgccggcgtccttggcgctgtac 2306080
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>ref|XM_362484.1| Magnaporthe grisea 70-15 hypothetical protein (MG08067.4) partial
            mRNA
          Length = 3513

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 579  cttggcggcgtccttggcgct 599
            |||||||||||||||||||||
Sbjct: 3393 cttggcggcgtccttggcgct 3373
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 579     cttggcggcgtccttggcgctgtac 603
               |||| ||||||||||||||||||||
Sbjct: 1378525 cttgccggcgtccttggcgctgtac 1378549
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>gb|AC145802.2| Xenopus tropicalis clone CH216-80C17, complete sequence
          Length = 163910

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    aagcacatattatatgtgcta 59
             |||||||||||||||||||||
Sbjct: 98064 aagcacatattatatgtgcta 98084
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>emb|AL606754.6| Human DNA sequence from clone RP11-479E16 on chromosome X Contains the
             3' end of the gene for a novel protein (FLJ31204),
             complete sequence
          Length = 106636

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    tataaagcacatattatatgt 55
             |||||||||||||||||||||
Sbjct: 54287 tataaagcacatattatatgt 54307
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 579     cttggcggcgtccttggcgctgtac 603
               |||| ||||||||||||||||||||
Sbjct: 1250449 cttgccggcgtccttggcgctgtac 1250473
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 217     ttacggcgtcggcggcgctca 237
               |||||||||||||||||||||
Sbjct: 4049712 ttacggcgtcggcggcgctca 4049692
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 465      gaggatggcggagaggacggagagg 489
                |||| ||||||||||||||||||||
Sbjct: 11442192 gagggtggcggagaggacggagagg 11442168
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 308     ggccggtctccaggtccaccc 328
               |||||||||||||||||||||
Sbjct: 1129003 ggccggtctccaggtccaccc 1129023
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>dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0022N24
          Length = 124062

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 465   gaggatggcggagaggacggagagg 489
             |||| ||||||||||||||||||||
Sbjct: 79390 gagggtggcggagaggacggagagg 79366
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>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1770_H02
          Length = 170648

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 351   ctcatccccaatcttcaccaa 371
             |||||||||||||||||||||
Sbjct: 31955 ctcatccccaatcttcaccaa 31975
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>emb|AJ007559.1|CRE7559 Chlamydomonas reinhardtii mRNA for 1-deoxy-D-xylulose-5-phosphate
            synthase, partial
          Length = 3232

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 578  acttggcggcgtccttggcgc 598
            |||||||||||||||||||||
Sbjct: 2316 acttggcggcgtccttggcgc 2296
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>ref|XM_566224.1| Anopheles gambiae str. PEST ENSANGP00000026283 (ENSANGG00000016941),
            partial mRNA
          Length = 1459

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 254  cgtacttggcgagctcctccgcgtt 278
            |||||||||| ||||||||||||||
Sbjct: 1264 cgtacttggccagctcctccgcgtt 1240
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>ref|XM_310956.2| Anopheles gambiae str. PEST ENSANGP00000019430 (ENSANGG00000016941),
            mRNA
          Length = 1731

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 254  cgtacttggcgagctcctccgcgtt 278
            |||||||||| ||||||||||||||
Sbjct: 1536 cgtacttggccagctcctccgcgtt 1512
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 308    ggccggtctccaggtccaccc 328
              |||||||||||||||||||||
Sbjct: 802362 ggccggtctccaggtccaccc 802382
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>gb|AC152976.1| Mus musculus  BAC RP23-103K17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 194151

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    catataaagcacatattata 52
             ||||||||||||||||||||
Sbjct: 70465 catataaagcacatattata 70446
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 515     cggcgttgaacatgtcgagg 534
               ||||||||||||||||||||
Sbjct: 2299749 cggcgttgaacatgtcgagg 2299730
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    cggcgtcggcggcgctcatc 239
              ||||||||||||||||||||
Sbjct: 113747 cggcgtcggcggcgctcatc 113766
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>gb|AC115767.14| Mus musculus chromosome 6, clone RP23-83K15, complete sequence
          Length = 257790

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     catataaagcacatattata 52
              ||||||||||||||||||||
Sbjct: 255591 catataaagcacatattata 255610
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>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0094K23, complete sequence
          Length = 167482

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   gaggagccgaggatggcgga 476
             ||||||||||||||||||||
Sbjct: 34256 gaggagccgaggatggcgga 34237
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>gb|AC102668.12| Mus musculus chromosome 6, clone RP23-296I18, complete sequence
          Length = 186488

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     catataaagcacatattata 52
              ||||||||||||||||||||
Sbjct: 152716 catataaagcacatattata 152697
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>gb|AC122395.4| Mus musculus BAC clone RP24-86H17 from chromosome 9, complete sequence
          Length = 203891

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     taatgactcttgcacaagac 80
              ||||||||||||||||||||
Sbjct: 129318 taatgactcttgcacaagac 129337
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>gb|DQ462412.1| Spinibarbus sinensis neuropeptide Y mRNA, complete cds
          Length = 740

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 tacttggcgagctcctccgc 275
           ||||||||||||||||||||
Sbjct: 202 tacttggcgagctcctccgc 183
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>ref|XM_739811.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000210.02.0)
           partial mRNA
          Length = 888

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  cacatattatatgtgctaat 61
           ||||||||||||||||||||
Sbjct: 274 cacatattatatgtgctaat 255
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>emb|BX016260.1|CNS08KPK Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA24BE12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 974

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 293 gcacctccacattccggccggtct 316
           ||||||||||||||| ||||||||
Sbjct: 310 gcacctccacattcccgccggtct 287
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>emb|BX119976.8| Zebrafish DNA sequence from clone CH211-196F5 in linkage group 20
             Contains the gene for a novel protein (zgc:63952), the 3'
             end of the gene for a novel protein similar to mouse and
             human importin 4 (IPO4), three genes for transposase, a
             novel gene and six CpG islands, complete sequence
          Length = 190000

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 184   caattgctagtttggtttgaggca 207
             |||||||| |||||||||||||||
Sbjct: 60892 caattgctggtttggtttgaggca 60869
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>emb|CR762418.5| Zebrafish DNA sequence from clone RP71-15A9 in linkage group 19,
             complete sequence
          Length = 147881

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tacttggcgagctcctccgc 275
             ||||||||||||||||||||
Sbjct: 57178 tacttggcgagctcctccgc 57197
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>gb|AC107960.3| Homo sapiens chromosome 8, clone RP11-983C19, complete sequence
          Length = 180854

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   ttgaacacatacattaaact 177
             ||||||||||||||||||||
Sbjct: 37889 ttgaacacatacattaaact 37870
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>gb|AC107870.6| Homo sapiens chromosome 8, clone CTC-777N14, complete sequence
          Length = 73460

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   ttgaacacatacattaaact 177
             ||||||||||||||||||||
Sbjct: 50721 ttgaacacatacattaaact 50702
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>gb|AC099818.2| Homo sapiens chromosome 8, clone RP11-99I9, complete sequence
          Length = 160046

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    ttgaacacatacattaaact 177
              ||||||||||||||||||||
Sbjct: 151905 ttgaacacatacattaaact 151886
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>gb|DQ380626.1| Environmental sequence clone W1-9 arsenite oxidase Mo-pterin
           subunit (aoxB) gene, partial cds
          Length = 483

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 496 tcgaccatgtcggcgctggcggcg 519
           ||||||||| ||||||||||||||
Sbjct: 395 tcgaccatggcggcgctggcggcg 418
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>ref|NM_131074.1| Danio rerio neuropeptide Y (npy), mRNA
          Length = 1033

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 tacttggcgagctcctccgc 275
           ||||||||||||||||||||
Sbjct: 204 tacttggcgagctcctccgc 185
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 286     ccaccgggcacctccacattccggccgg 313
               |||||||||| ||| |||||||||||||
Sbjct: 3069891 ccaccgggcagctcgacattccggccgg 3069864
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>dbj|AK086176.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930010J19 product:CARD14, full insert
           sequence
          Length = 1600

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 592 ttggcgctgtactttgagttttgg 615
           ||||||||| ||||||||||||||
Sbjct: 175 ttggcgctggactttgagttttgg 198
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 457      gaggagccgaggatggcgga 476
                ||||||||||||||||||||
Sbjct: 19438849 gaggagccgaggatggcgga 19438830
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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 333     caccttctcggcgagaagct 352
               ||||||||||||||||||||
Sbjct: 1880735 caccttctcggcgagaagct 1880754
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>gb|AC098645.3| Papio anubis clone RP41-470J23, complete sequence
          Length = 193317

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    ataattaaatcaaacaaaca 124
              ||||||||||||||||||||
Sbjct: 124975 ataattaaatcaaacaaaca 124994
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 496   tcgaccatgtcggcgctggc 515
             ||||||||||||||||||||
Sbjct: 53880 tcgaccatgtcggcgctggc 53899
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>gb|AF287347.1|AF287347 Cyprinus carpio neuropeptide Y mRNA, complete cds
          Length = 730

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 tacttggcgagctcctccgc 275
           ||||||||||||||||||||
Sbjct: 211 tacttggcgagctcctccgc 192
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>gb|AF233874.1|AF233874 Danio rerio neuropeptide Y precursor gene, complete cds
          Length = 2987

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 tacttggcgagctcctccgc 275
           ||||||||||||||||||||
Sbjct: 879 tacttggcgagctcctccgc 860
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>emb|BX640495.10| Zebrafish DNA sequence from clone CH211-107H7 in linkage group 20,
             complete sequence
          Length = 73842

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tataaagcacatattatatg 54
             ||||||||||||||||||||
Sbjct: 27565 tataaagcacatattatatg 27584
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>gb|AE005103.1| Halobacterium sp. NRC-1 section 134 of 170 of the complete genome
          Length = 11252

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 506 cggcgctggcggcgttgaac 525
           ||||||||||||||||||||
Sbjct: 867 cggcgctggcggcgttgaac 886
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>emb|BX640464.10| Zebrafish DNA sequence from clone DKEY-22M8 in linkage group 19, complete
              sequence
          Length = 255824

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    tacttggcgagctcctccgc 275
              ||||||||||||||||||||
Sbjct: 226591 tacttggcgagctcctccgc 226610
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>emb|BX510657.9| Zebrafish DNA sequence from clone CH211-142K18 in linkage group 20,
             complete sequence
          Length = 163967

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    ttttcatgtcatataaagca 43
             ||||||||||||||||||||
Sbjct: 59860 ttttcatgtcatataaagca 59879
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>dbj|AP005661.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1182F3, complete
             sequence
          Length = 151887

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   ttgaacacatacattaaact 177
             ||||||||||||||||||||
Sbjct: 81263 ttgaacacatacattaaact 81244
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>emb|AL645911.14| Mouse DNA sequence from clone RP23-25M3 on chromosome 11, complete
             sequence
          Length = 244653

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 592   ttggcgctgtactttgagttttgg 615
             ||||||||| ||||||||||||||
Sbjct: 21647 ttggcgctggactttgagttttgg 21670
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>gb|M87297.1|CRANPY Carassius auratus neuropeptide Y mRNA, complete cds
          Length = 1051

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 tacttggcgagctcctccgc 275
           ||||||||||||||||||||
Sbjct: 190 tacttggcgagctcctccgc 171


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,217,979
Number of Sequences: 3902068
Number of extensions: 5217979
Number of successful extensions: 119218
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117925
Number of HSP's gapped (non-prelim): 1290
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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