ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467086.1| Oryza sativa (japonica cultivar-group), mRNA 317 2e-83
2ref|XM_506887.1| PREDICTED Oryza sativa (japonica cultivar-group... 317 2e-83
3dbj|AK104153.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
4dbj|AK068164.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
5dbj|AK060578.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
6gb|AY105955.1| Zea mays PCO121693 mRNA sequence 313 4e-82
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
8dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
9emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 153 8e-34
10emb|AM085509.1| Hordeum vulgare mRNA for autophagy protein 9 (at... 101 3e-18
11emb|AL139409.9| Human DNA sequence from clone RP11-120D12 on chr... 46 0.14
12ref|XM_385229.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 42 2.2
13gb|AC114995.7| Mus musculus chromosome 8, clone RP23-171P5, comp... 42 2.2
14emb|AL135842.15| Human DNA sequence from clone RP1-91G5 on chrom... 42 2.2
15emb|BX842628.1| Neurospora crassa DNA linkage group I BAC clone ... 42 2.2
16gb|AC026807.4| Homo sapiens chromosome 5 clone RPCI-1_58P9, comp... 42 2.2
17ref|XM_392585.2| PREDICTED: Apis mellifera similar to hypothetic... 42 2.2
18gb|AC158171.2| Pan troglodytes BAC clone CH251-434I6 from chromo... 42 2.2
19gb|AF261103.1|AF261103 Myxococcus xanthus nusA/infB operon, part... 42 2.2
20ref|NM_016523.1| Homo sapiens killer cell lectin-like receptor s... 40 8.7
21emb|BX842623.1| Neurospora crassa DNA linkage group I BAC clone ... 40 8.7
22gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 8.7
23emb|AJ305370.1|HSA305370 Homo sapiens mRNA for activating corece... 40 8.7
24gb|AC007068.17| Homo sapiens 12p BAC RPCI11-75L1 (Roswell Park C... 40 8.7
25gb|AF267245.1|AF267245 Homo sapiens killer cell lectin-like rece... 40 8.7
26gb|AF267244.1|AF267244 Homo sapiens killer cell lectin-like rece... 40 8.7
27gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Canc... 40 8.7
28dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
29gb|AY747799.1| Nomonyx dominicus voucher UAM 14601 (KGM 476) D-l... 40 8.7
30gb|AY747798.1| Nomonyx dominicus voucher UAM 14785 (KGM 466) D-l... 40 8.7
31gb|AY747797.1| Nomonyx dominicus voucher UAM 14785 (KGM 466) D-l... 40 8.7
32gb|AY747796.1| Nomonyx dominicus voucher UAM 19510 (KGM 465) D-l... 40 8.7
33gb|AY747795.1| Nomonyx dominicus voucher UAM 14784 (KGM 464) D-l... 40 8.7
34gb|AY747794.1| Nomonyx dominicus voucher UAM 14784 (KGM 464) D-l... 40 8.7
35gb|AY747790.1| Nomonyx dominicus voucher LSUMZ 123431 D-loop and... 40 8.7
36gb|AC079378.2| Rattus norvegicus strain Brown Norway chromosome ... 40 8.7
37gb|BC040358.1| Homo sapiens, clone IMAGE:4340526, mRNA 40 8.7
38gb|BC098354.1| Homo sapiens killer cell lectin-like receptor sub... 40 8.7
39gb|AF175207.1|AF175207 Homo sapiens lectin-like receptor F1, spl... 40 8.7
40gb|AF175206.1|AF175206 Homo sapiens lectin-like receptor F1 (KLR... 40 8.7
41gb|BC098166.1| Homo sapiens killer cell lectin-like receptor sub... 40 8.7
42gb|BC096734.1| Homo sapiens killer cell lectin-like receptor sub... 40 8.7
43gb|BC098257.1| Homo sapiens killer cell lectin-like receptor sub... 40 8.7
44dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
45emb|AJ534355.1|ABI534355 Agaricus bisporus partial mRNA for puta... 40 8.7
46gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malay... 40 8.7
47gb|AC107884.15| Homo sapiens chromosome 11, clone CTD-2516F10, c... 40 8.7 
>ref|XM_467086.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 909

 Score =  317 bits (160), Expect = 2e-83
 Identities = 301/348 (86%)
 Strand = Plus / Minus

                                                                       
Query: 263 acttgaaggttgagaaacggggaagcttgtacttcaggtagtacaactttgccctcctca 322
           ||||||| ||||| || ||||||||||||| |||||  || || |||||||| || ||||
Sbjct: 760 acttgaaagttgaaaagcggggaagcttgtgcttcaaataatataactttgctcttctca 701

                                                                       
Query: 323 ccttcttgtgtctgattactttgatctccttgatccttggtgagtatatggggaatgtaa 382
           | |||||||| ||||||||||| || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 700 ctttcttgtgcctgattactttaatttccttgatcctgggtgaatatatagggaaggtaa 641

                                                                       
Query: 383 tttcaactccaacaccggcaataatcctcctgacgcggatcgtggtgtgaacaccagatt 442
           | |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 640 tctcaactccgacaccagcaataatccttctgacacggattgtggtgtgaacaccagatt 581

                                                                       
Query: 443 tgtgctttgcaatgattatacccttaaagagagacaatctcctcttgttgggacgttgca 502
           |||| ||||| || ||||| ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 580 tgtgttttgctataattatgcccttaaagagcgacaatctcctcttgttgggccgttgca 521

                                                                       
Query: 503 ttctaagctcgatgatgtcaccgggcttcaaatccggaagtactttcaccttctcagcct 562
           |||||||||| ||||||||||| ||| | | ||| || |     |||||||| |||||||
Sbjct: 520 ttctaagctcaatgatgtcaccaggcctaagatctggtaaagtcttcaccttttcagcct 461

                                                           
Query: 563 cctcgatgaactgcttgttcagaatcccgatgatctcgccgaacttaa 610
           |||| |||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 460 cctcaatgaactgtttgttcagaatcccaatgatctccccgaacttaa 413
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>ref|XM_506887.1| PREDICTED Oryza sativa (japonica cultivar-group), P0491E01.20 mRNA
          Length = 1005

 Score =  317 bits (160), Expect = 2e-83
 Identities = 301/348 (86%)
 Strand = Plus / Minus

                                                                       
Query: 263 acttgaaggttgagaaacggggaagcttgtacttcaggtagtacaactttgccctcctca 322
           ||||||| ||||| || ||||||||||||| |||||  || || |||||||| || ||||
Sbjct: 761 acttgaaagttgaaaagcggggaagcttgtgcttcaaataatataactttgctcttctca 702

                                                                       
Query: 323 ccttcttgtgtctgattactttgatctccttgatccttggtgagtatatggggaatgtaa 382
           | |||||||| ||||||||||| || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 701 ctttcttgtgcctgattactttaatttccttgatcctgggtgaatatatagggaaggtaa 642

                                                                       
Query: 383 tttcaactccaacaccggcaataatcctcctgacgcggatcgtggtgtgaacaccagatt 442
           | |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 641 tctcaactccgacaccagcaataatccttctgacacggattgtggtgtgaacaccagatt 582

                                                                       
Query: 443 tgtgctttgcaatgattatacccttaaagagagacaatctcctcttgttgggacgttgca 502
           |||| ||||| || ||||| ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 581 tgtgttttgctataattatgcccttaaagagcgacaatctcctcttgttgggccgttgca 522

                                                                       
Query: 503 ttctaagctcgatgatgtcaccgggcttcaaatccggaagtactttcaccttctcagcct 562
           |||||||||| ||||||||||| ||| | | ||| || |     |||||||| |||||||
Sbjct: 521 ttctaagctcaatgatgtcaccaggcctaagatctggtaaagtcttcaccttttcagcct 462

                                                           
Query: 563 cctcgatgaactgcttgttcagaatcccgatgatctcgccgaacttaa 610
           |||| |||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 461 cctcaatgaactgtttgttcagaatcccaatgatctccccgaacttaa 414
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>dbj|AK104153.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-G03, full
           insert sequence
          Length = 909

 Score =  317 bits (160), Expect = 2e-83
 Identities = 301/348 (86%)
 Strand = Plus / Minus

                                                                       
Query: 263 acttgaaggttgagaaacggggaagcttgtacttcaggtagtacaactttgccctcctca 322
           ||||||| ||||| || ||||||||||||| |||||  || || |||||||| || ||||
Sbjct: 760 acttgaaagttgaaaagcggggaagcttgtgcttcaaataatataactttgctcttctca 701

                                                                       
Query: 323 ccttcttgtgtctgattactttgatctccttgatccttggtgagtatatggggaatgtaa 382
           | |||||||| ||||||||||| || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 700 ctttcttgtgcctgattactttaatttccttgatcctgggtgaatatatagggaaggtaa 641

                                                                       
Query: 383 tttcaactccaacaccggcaataatcctcctgacgcggatcgtggtgtgaacaccagatt 442
           | |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 640 tctcaactccgacaccagcaataatccttctgacacggattgtggtgtgaacaccagatt 581

                                                                       
Query: 443 tgtgctttgcaatgattatacccttaaagagagacaatctcctcttgttgggacgttgca 502
           |||| ||||| || ||||| ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 580 tgtgttttgctataattatgcccttaaagagcgacaatctcctcttgttgggccgttgca 521

                                                                       
Query: 503 ttctaagctcgatgatgtcaccgggcttcaaatccggaagtactttcaccttctcagcct 562
           |||||||||| ||||||||||| ||| | | ||| || |     |||||||| |||||||
Sbjct: 520 ttctaagctcaatgatgtcaccaggcctaagatctggtaaagtcttcaccttttcagcct 461

                                                           
Query: 563 cctcgatgaactgcttgttcagaatcccgatgatctcgccgaacttaa 610
           |||| |||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 460 cctcaatgaactgtttgttcagaatcccaatgatctccccgaacttaa 413
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>dbj|AK068164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135C05, full
           insert sequence
          Length = 1005

 Score =  317 bits (160), Expect = 2e-83
 Identities = 301/348 (86%)
 Strand = Plus / Minus

                                                                       
Query: 263 acttgaaggttgagaaacggggaagcttgtacttcaggtagtacaactttgccctcctca 322
           ||||||| ||||| || ||||||||||||| |||||  || || |||||||| || ||||
Sbjct: 761 acttgaaagttgaaaagcggggaagcttgtgcttcaaataatataactttgctcttctca 702

                                                                       
Query: 323 ccttcttgtgtctgattactttgatctccttgatccttggtgagtatatggggaatgtaa 382
           | |||||||| ||||||||||| || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 701 ctttcttgtgcctgattactttaatttccttgatcctgggtgaatatatagggaaggtaa 642

                                                                       
Query: 383 tttcaactccaacaccggcaataatcctcctgacgcggatcgtggtgtgaacaccagatt 442
           | |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 641 tctcaactccgacaccagcaataatccttctgacacggattgtggtgtgaacaccagatt 582

                                                                       
Query: 443 tgtgctttgcaatgattatacccttaaagagagacaatctcctcttgttgggacgttgca 502
           |||| ||||| || ||||| ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 581 tgtgttttgctataattatgcccttaaagagcgacaatctcctcttgttgggccgttgca 522

                                                                       
Query: 503 ttctaagctcgatgatgtcaccgggcttcaaatccggaagtactttcaccttctcagcct 562
           |||||||||| ||||||||||| ||| | | ||| || |     |||||||| |||||||
Sbjct: 521 ttctaagctcaatgatgtcaccaggcctaagatctggtaaagtcttcaccttttcagcct 462

                                                           
Query: 563 cctcgatgaactgcttgttcagaatcccgatgatctcgccgaacttaa 610
           |||| |||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 461 cctcaatgaactgtttgttcagaatcccaatgatctccccgaacttaa 414
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>dbj|AK060578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E10, full
            insert sequence
          Length = 1278

 Score =  317 bits (160), Expect = 2e-83
 Identities = 301/348 (86%)
 Strand = Plus / Minus

                                                                        
Query: 263  acttgaaggttgagaaacggggaagcttgtacttcaggtagtacaactttgccctcctca 322
            ||||||| ||||| || ||||||||||||| |||||  || || |||||||| || ||||
Sbjct: 1060 acttgaaagttgaaaagcggggaagcttgtgcttcaaataatataactttgctcttctca 1001

                                                                        
Query: 323  ccttcttgtgtctgattactttgatctccttgatccttggtgagtatatggggaatgtaa 382
            | |||||||| ||||||||||| || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 1000 ctttcttgtgcctgattactttaatttccttgatcctgggtgaatatatagggaaggtaa 941

                                                                        
Query: 383  tttcaactccaacaccggcaataatcctcctgacgcggatcgtggtgtgaacaccagatt 442
            | |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 940  tctcaactccgacaccagcaataatccttctgacacggattgtggtgtgaacaccagatt 881

                                                                        
Query: 443  tgtgctttgcaatgattatacccttaaagagagacaatctcctcttgttgggacgttgca 502
            |||| ||||| || ||||| ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 880  tgtgttttgctataattatgcccttaaagagcgacaatctcctcttgttgggccgttgca 821

                                                                        
Query: 503  ttctaagctcgatgatgtcaccgggcttcaaatccggaagtactttcaccttctcagcct 562
            |||||||||| ||||||||||| ||| | | ||| || |     |||||||| |||||||
Sbjct: 820  ttctaagctcaatgatgtcaccaggcctaagatctggtaaagtcttcaccttttcagcct 761

                                                            
Query: 563  cctcgatgaactgcttgttcagaatcccgatgatctcgccgaacttaa 610
            |||| |||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 760  cctcaatgaactgtttgttcagaatcccaatgatctccccgaacttaa 713
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>gb|AY105955.1| Zea mays PCO121693 mRNA sequence
          Length = 1004

 Score =  313 bits (158), Expect = 4e-82
 Identities = 302/350 (86%)
 Strand = Plus / Minus

                                                                       
Query: 261 tcacttgaaggttgagaaacggggaagcttgtacttcaggtagtacaactttgccctcct 320
           ||||||||| ||||| || |||||||||||||  |||||||||||||||||||| |||||
Sbjct: 817 tcacttgaatgttgaaaagcggggaagcttgtctttcaggtagtacaactttgctctcct 758

                                                                       
Query: 321 caccttcttgtgtctgattactttgatctccttgatccttggtgagtatatggggaatgt 380
           ||| |||||||| ||||| ||  |||| ||||||||||| |||||||| |  ||||| ||
Sbjct: 757 cactttcttgtgcctgataaccgtgatttccttgatcctgggtgagtacactgggaaggt 698

                                                                       
Query: 381 aatttcaactccaacaccggcaataatcctcctgacgcggatcgtggtgtgaacaccaga 440
           ||| |||||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||||| 
Sbjct: 697 aatctcaactcctacaccagcaatgatccttctgacacggattgtggtgtgaacaccagc 638

                                                                       
Query: 441 tttgtgctttgcaatgattatacccttaaagagagacaatctcctcttgttgggacgttg 500
           |||||||||||| |||||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 637 tttgtgctttgcgatgattatgcccttaaagagcgacaatctccttttgttgggccgttg 578

                                                                       
Query: 501 cattctaagctcgatgatgtcaccgggcttcaaatccggaagtactttcaccttctcagc 560
           ||| |||||||| ||||| || || ||| ||| |||||| |     ||||||||||||||
Sbjct: 577 catcctaagctcaatgatatcgccaggcctcagatccggtacagtcttcaccttctcagc 518

                                                             
Query: 561 ctcctcgatgaactgcttgttcagaatcccgatgatctcgccgaacttaa 610
           |||||| ||||||||||| ||||||||||| || || |||||||||||||
Sbjct: 517 ctcctcaatgaactgcttattcagaatcccaattatttcgccgaacttaa 468
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  153 bits (77), Expect = 8e-34
 Identities = 116/129 (89%)
 Strand = Plus / Plus

                                                                            
Query: 373      gggaatgtaatttcaactccaacaccggcaataatcctcctgacgcggatcgtggtgtga 432
                ||||| ||||| |||||||| ||||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 26337384 gggaaggtaatctcaactccgacaccagcaataatccttctgacacggattgtggtgtga 26337443

                                                                            
Query: 433      acaccagatttgtgctttgcaatgattatacccttaaagagagacaatctcctcttgttg 492
                |||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||||
Sbjct: 26337444 acaccagatttgtgttttgctataattatgcccttaaagagcgacaatctcctcttgttg 26337503

                         
Query: 493      ggacgttgc 501
                || ||||||
Sbjct: 26337504 ggccgttgc 26337512



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                            
Query: 263      acttgaaggttgagaaacggggaagcttgtacttcaggtagtacaactttgccctcctca 322
                ||||||| ||||| || ||||||||||||| |||||  || || |||||||| || ||||
Sbjct: 26336234 acttgaaagttgaaaagcggggaagcttgtgcttcaaataatataactttgctcttctca 26336293

                                                           
Query: 323      ccttcttgtgtctgattactttgatctccttgatccttggtga 365
                | |||||||| ||||||||||| || ||||||||||| |||||
Sbjct: 26336294 ctttcttgtgcctgattactttaatttccttgatcctgggtga 26336336



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                          
Query: 547      ttcaccttctcagcctcctcgatgaactgcttgttcagaatc 588
                |||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 26337640 ttcaccttttcagcctcctcaatgaactgtttgttcagaatc 26337681
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>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:P0491E01
          Length = 136150

 Score =  153 bits (77), Expect = 8e-34
 Identities = 116/129 (89%)
 Strand = Plus / Plus

                                                                         
Query: 373   gggaatgtaatttcaactccaacaccggcaataatcctcctgacgcggatcgtggtgtga 432
             ||||| ||||| |||||||| ||||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 69736 gggaaggtaatctcaactccgacaccagcaataatccttctgacacggattgtggtgtga 69795

                                                                         
Query: 433   acaccagatttgtgctttgcaatgattatacccttaaagagagacaatctcctcttgttg 492
             |||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||||
Sbjct: 69796 acaccagatttgtgttttgctataattatgcccttaaagagcgacaatctcctcttgttg 69855

                      
Query: 493   ggacgttgc 501
             || ||||||
Sbjct: 69856 ggccgttgc 69864



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                         
Query: 263   acttgaaggttgagaaacggggaagcttgtacttcaggtagtacaactttgccctcctca 322
             ||||||| ||||| || ||||||||||||| |||||  || || |||||||| || ||||
Sbjct: 68586 acttgaaagttgaaaagcggggaagcttgtgcttcaaataatataactttgctcttctca 68645

                                                        
Query: 323   ccttcttgtgtctgattactttgatctccttgatccttggtga 365
             | |||||||| ||||||||||| || ||||||||||| |||||
Sbjct: 68646 ctttcttgtgcctgattactttaatttccttgatcctgggtga 68688



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 547   ttcaccttctcagcctcctcgatgaactgcttgttcagaatc 588
             |||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 69992 ttcaccttttcagcctcctcaatgaactgtttgttcagaatc 70033
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score =  153 bits (77), Expect = 8e-34
 Identities = 116/129 (89%)
 Strand = Plus / Plus

                                                                         
Query: 373   gggaatgtaatttcaactccaacaccggcaataatcctcctgacgcggatcgtggtgtga 432
             ||||| ||||| |||||||| ||||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 60055 gggaaggtaatctcaactccgacaccagcaataatccttctgacacggattgtggtgtga 60114

                                                                         
Query: 433   acaccagatttgtgctttgcaatgattatacccttaaagagagacaatctcctcttgttg 492
             |||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||||
Sbjct: 60115 acaccagatttgtgttttgctataattatgcccttaaagagcgacaatctcctcttgttg 60174

                      
Query: 493   ggacgttgc 501
             || ||||||
Sbjct: 60175 ggccgttgc 60183



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                         
Query: 263   acttgaaggttgagaaacggggaagcttgtacttcaggtagtacaactttgccctcctca 322
             ||||||| ||||| || ||||||||||||| |||||  || || |||||||| || ||||
Sbjct: 58903 acttgaaagttgaaaagcggggaagcttgtgcttcaaataatataactttgctcttctca 58962

                                                        
Query: 323   ccttcttgtgtctgattactttgatctccttgatccttggtga 365
             | |||||||| ||||||||||| || ||||||||||| |||||
Sbjct: 58963 ctttcttgtgcctgattactttaatttccttgatcctgggtga 59005



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 547   ttcaccttctcagcctcctcgatgaactgcttgttcagaatc 588
             |||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 60311 ttcaccttttcagcctcctcaatgaactgtttgttcagaatc 60352
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>emb|AM085509.1| Hordeum vulgare mRNA for autophagy protein 9 (atg9 gene)
          Length = 3302

 Score =  101 bits (51), Expect = 3e-18
 Identities = 102/119 (85%)
 Strand = Plus / Plus

                                                                       
Query: 448 tttgcaatgattatacccttaaagagagacaatctcctcttgttgggacgttgcattcta 507
           ||||||||||||   ||| |||| |||| | ||| |||||||||||  |||  |||||||
Sbjct: 248 tttgcaatgatttcccccctaaaaagagcccatcccctcttgttggcccgtgccattcta 307

                                                                      
Query: 508 agctcgatgatgtcaccgggcttcaaatccggaagtactttcaccttctcagcctcctc 566
           ||||||||||||||||||| | |||||||||||||||||||||||| |||  |||||||
Sbjct: 308 agctcgatgatgtcaccggccctcaaatccggaagtactttcacctcctcctcctcctc 366
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>emb|AL139409.9| Human DNA sequence from clone RP11-120D12 on chromosome 1q21.2-22
             Contains the 5' end of the gene for Fc receptor-like
             protein 1 (FCRH1), the CD5L gene for CD5 antigen-like
             (scavenger receptor cysteine rich family) and a
             mitochondrial ribosomal protein S21 (MRPS21) pseudogene,
             complete sequence
          Length = 63633

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 347   tctccttgatccttggtgagtat 369
             |||||||||||||||||||||||
Sbjct: 35498 tctccttgatccttggtgagtat 35476
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>ref|XM_385229.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05053.1)
           partial mRNA
          Length = 1176

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 552 cttctcagcctcctcgatgaa 572
           |||||||||||||||||||||
Sbjct: 402 cttctcagcctcctcgatgaa 382
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>gb|AC114995.7| Mus musculus chromosome 8, clone RP23-171P5, complete sequence
          Length = 242745

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 74    tacacactcagaatgaaacacactc 98
             |||||||||| ||||||||||||||
Sbjct: 71851 tacacactcataatgaaacacactc 71875
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>emb|AL135842.15| Human DNA sequence from clone RP1-91G5 on chromosome 1q21.1-21.3
             Contains the 3' end of a novel gene, a novel gene, a high
             mobility group nucleosomal binding domain 3 (HMGN3)
             pseudogene, the C1orf10 gene for chromosome 1 open reading
             frame 10, the SPRL5A for small proline rich-like
             (epidermal differentiation complex) 5A and the NICE-1 gene
             for NICE-1 protein, complete sequence
          Length = 188285

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 428   tgtgaacaccagatttgtgct 448
             |||||||||||||||||||||
Sbjct: 29903 tgtgaacaccagatttgtgct 29883
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>emb|BX842628.1| Neurospora crassa DNA linkage group I BAC clone B23L4
          Length = 61971

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    aaacatcaccatgttcatacc 54
             |||||||||||||||||||||
Sbjct: 46005 aaacatcaccatgttcatacc 46025
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>gb|AC026807.4| Homo sapiens chromosome 5 clone RPCI-1_58P9, complete sequence
          Length = 101716

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 544   actttcaccttctcagcctcc 564
             |||||||||||||||||||||
Sbjct: 69064 actttcaccttctcagcctcc 69084
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>ref|XM_392585.2| PREDICTED: Apis mellifera similar to hypothetical protein
           (LOC409059), mRNA
          Length = 1428

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 129 gaaaaagatgtaaaattatgc 149
           |||||||||||||||||||||
Sbjct: 436 gaaaaagatgtaaaattatgc 456
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>gb|AC158171.2| Pan troglodytes BAC clone CH251-434I6 from chromosome unknown, complete
              sequence
          Length = 184468

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 544    actttcaccttctcagcctcc 564
              |||||||||||||||||||||
Sbjct: 145334 actttcaccttctcagcctcc 145354
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>gb|AF261103.1|AF261103 Myxococcus xanthus nusA/infB operon, partial sequence; and unknown
            gene
          Length = 4674

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 510  ctcgatgatgtcaccgggctt 530
            |||||||||||||||||||||
Sbjct: 4376 ctcgatgatgtcaccgggctt 4356
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>ref|NM_016523.1| Homo sapiens killer cell lectin-like receptor subfamily F, member 1
           (KLRF1), mRNA
          Length = 1242

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 actttgatctccttgatcct 359
           ||||||||||||||||||||
Sbjct: 224 actttgatctccttgatcct 243
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>emb|BX842623.1| Neurospora crassa DNA linkage group I BAC clone B2I10
          Length = 83703

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   ggttgagaaacggggaagct 289
             ||||||||||||||||||||
Sbjct: 33637 ggttgagaaacggggaagct 33618
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 580     ttcagaatcccgatgatctc 599
               ||||||||||||||||||||
Sbjct: 1784144 ttcagaatcccgatgatctc 1784163
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>emb|AJ305370.1|HSA305370 Homo sapiens mRNA for activating coreceptor NKp80 (ML/KLRF1 gene)
          Length = 1249

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 actttgatctccttgatcct 359
           ||||||||||||||||||||
Sbjct: 207 actttgatctccttgatcct 226
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>gb|AC007068.17| Homo sapiens 12p BAC RPCI11-75L1 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178607

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   actttgatctccttgatcct 359
             ||||||||||||||||||||
Sbjct: 31126 actttgatctccttgatcct 31107
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>gb|AF267245.1|AF267245 Homo sapiens killer cell lectin-like receptor KLRF1-S3 (KLRF1)
           mRNA, complete cds., alternatively spliced
          Length = 839

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 actttgatctccttgatcct 359
           ||||||||||||||||||||
Sbjct: 224 actttgatctccttgatcct 243
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>gb|AF267244.1|AF267244 Homo sapiens killer cell lectin-like receptor KLRF1-S2 (KLRF1)
           mRNA, complete cds., alternatively spliced
          Length = 952

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 actttgatctccttgatcct 359
           ||||||||||||||||||||
Sbjct: 224 actttgatctccttgatcct 243
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>gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 215953

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   cacagatctgaacaagatgg 201
             ||||||||||||||||||||
Sbjct: 78635 cacagatctgaacaagatgg 78616
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 27       acaatctaaacatcaccatg 46
                ||||||||||||||||||||
Sbjct: 29409415 acaatctaaacatcaccatg 29409434
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>gb|AY747799.1| Nomonyx dominicus voucher UAM 14601 (KGM 476) D-loop and tRNA-Phe
           gene, partial sequence; mitochondrial
          Length = 1004

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 539 gaagtactttcaccttctca 558
           ||||||||||||||||||||
Sbjct: 468 gaagtactttcaccttctca 487
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>gb|AY747798.1| Nomonyx dominicus voucher UAM 14785 (KGM 466) D-loop and tRNA-Phe
           gene, partial sequence; mitochondrial
          Length = 1062

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 539 gaagtactttcaccttctca 558
           ||||||||||||||||||||
Sbjct: 468 gaagtactttcaccttctca 487
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>gb|AY747797.1| Nomonyx dominicus voucher UAM 14785 (KGM 466) D-loop and tRNA-Phe
           gene, partial sequence; mitochondrial
          Length = 1004

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 539 gaagtactttcaccttctca 558
           ||||||||||||||||||||
Sbjct: 468 gaagtactttcaccttctca 487
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>gb|AY747796.1| Nomonyx dominicus voucher UAM 19510 (KGM 465) D-loop and tRNA-Phe
           gene, partial sequence; mitochondrial
          Length = 1055

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 539 gaagtactttcaccttctca 558
           ||||||||||||||||||||
Sbjct: 468 gaagtactttcaccttctca 487
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>gb|AY747795.1| Nomonyx dominicus voucher UAM 14784 (KGM 464) D-loop and tRNA-Phe
           gene, partial sequence; mitochondrial
          Length = 1062

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 539 gaagtactttcaccttctca 558
           ||||||||||||||||||||
Sbjct: 468 gaagtactttcaccttctca 487
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>gb|AY747794.1| Nomonyx dominicus voucher UAM 14784 (KGM 464) D-loop and tRNA-Phe
           gene, partial sequence; mitochondrial
          Length = 1004

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 539 gaagtactttcaccttctca 558
           ||||||||||||||||||||
Sbjct: 468 gaagtactttcaccttctca 487
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>gb|AY747790.1| Nomonyx dominicus voucher LSUMZ 123431 D-loop and tRNA-Phe gene,
           partial sequence; mitochondrial
          Length = 1097

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 539 gaagtactttcaccttctca 558
           ||||||||||||||||||||
Sbjct: 468 gaagtactttcaccttctca 487
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>gb|AC079378.2| Rattus norvegicus strain Brown Norway chromosome 4 clone RP31-7L11,
              complete sequence
          Length = 189137

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     gaattttacacactcagaat 87
              ||||||||||||||||||||
Sbjct: 120075 gaattttacacactcagaat 120094
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>gb|BC040358.1| Homo sapiens, clone IMAGE:4340526, mRNA
          Length = 4487

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 244  gaggagcgtgtctaatctca 263
            ||||||||||||||||||||
Sbjct: 2724 gaggagcgtgtctaatctca 2705
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>gb|BC098354.1| Homo sapiens killer cell lectin-like receptor subfamily F, member
           1, mRNA (cDNA clone MGC:119906 IMAGE:40015531), complete
           cds
          Length = 852

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 actttgatctccttgatcct 359
           ||||||||||||||||||||
Sbjct: 184 actttgatctccttgatcct 203
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>gb|AF175207.1|AF175207 Homo sapiens lectin-like receptor F1, splice variant 1 KLRF1-s1
           (KLRF1) mRNA, complete cds
          Length = 1092

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 actttgatctccttgatcct 359
           ||||||||||||||||||||
Sbjct: 224 actttgatctccttgatcct 243
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>gb|AF175206.1|AF175206 Homo sapiens lectin-like receptor F1 (KLRF1) mRNA, complete cds
          Length = 1242

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 actttgatctccttgatcct 359
           ||||||||||||||||||||
Sbjct: 224 actttgatctccttgatcct 243
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>gb|BC098166.1| Homo sapiens killer cell lectin-like receptor subfamily F, member
           1, mRNA (cDNA clone MGC:119908 IMAGE:40015535), complete
           cds
          Length = 730

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 actttgatctccttgatcct 359
           ||||||||||||||||||||
Sbjct: 184 actttgatctccttgatcct 203
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>gb|BC096734.1| Homo sapiens killer cell lectin-like receptor subfamily F, member
           1, mRNA (cDNA clone IMAGE:40015537), complete cds
          Length = 598

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 actttgatctccttgatcct 359
           ||||||||||||||||||||
Sbjct: 184 actttgatctccttgatcct 203
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>gb|BC098257.1| Homo sapiens killer cell lectin-like receptor subfamily F, member
           1, mRNA (cDNA clone MGC:119907 IMAGE:40015534), complete
           cds
          Length = 711

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 actttgatctccttgatcct 359
           ||||||||||||||||||||
Sbjct: 184 actttgatctccttgatcct 203
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    acaatctaaacatcaccatg 46
             ||||||||||||||||||||
Sbjct: 72337 acaatctaaacatcaccatg 72356
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>emb|AJ534355.1|ABI534355 Agaricus bisporus partial mRNA for putative glyoxylate pathway
           regulator (gpr gene), clone pm71
          Length = 520

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 gccctcctcaccttcttgtg 332
           ||||||||||||||||||||
Sbjct: 313 gccctcctcaccttcttgtg 332
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>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome
          Length = 1080084

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    aggtagtacaactttgccct 317
              ||||||||||||||||||||
Sbjct: 300959 aggtagtacaactttgccct 300940
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>gb|AC107884.15| Homo sapiens chromosome 11, clone CTD-2516F10, complete sequence
          Length = 177416

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 244    gaggagcgtgtctaatctca 263
              ||||||||||||||||||||
Sbjct: 149325 gaggagcgtgtctaatctca 149306


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,295,655
Number of Sequences: 3902068
Number of extensions: 5295655
Number of successful extensions: 90040
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89881
Number of HSP's gapped (non-prelim): 159
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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