ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13m23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein,... 353 2e-94
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 131 1e-27
3dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic D... 131 1e-27
4dbj|AK103949.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 1e-27
5dbj|AK102423.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 1e-27
6dbj|AK061776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 1e-27
7gb|BT016261.1| Zea mays clone Contig94 mRNA sequence 109 4e-21
8gb|AF015522.1|AF015522 Zea mays ribsomal protein S4 (rps4) mRNA,... 109 4e-21
9ref|NM_193994.1| Oryza sativa (japonica cultivar-group), predic... 101 1e-18
10gb|AY525608.1| Zea mays ribosomal protein S4 mRNA, complete cds 101 1e-18
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
12dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
13emb|Y15009.1|OSY15009 Oryza sativa mRNA for ribosomal protein S4 101 1e-18
14dbj|AK061826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
15gb|AF013487.1|AF013487 Zea mays ribosomal protein S4 type I (rps... 101 1e-18
16gb|BT017558.1| Zea mays clone EL01N0424H12.c mRNA sequence 86 6e-14
17ref|XM_475130.1| Oryza sativa (japonica cultivar-group), predic... 70 4e-09
18gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome... 70 4e-09
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 70 4e-09
20dbj|AK071862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 4e-09
21ref|XM_366671.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 56 5e-05
22ref|XM_388890.1| Gibberella zeae PH-1 chromosome 2 conserved hyp... 56 5e-05
23gb|AY850339.1| Magnaporthe grisea 40S ribosomal protein S4-A-lik... 56 5e-05
24dbj|AB232685.1| Panax ginseng mRNA for ribosomal protein S4, com... 54 2e-04
25ref|XM_502766.1| Yarrowia lipolytica CLIB122, YALI0D12903g predi... 50 0.003
26gb|AF054511.1|AF054511 Yarrowia lipolytica ribosomal protein S7 ... 50 0.003
27emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 50 0.003
28ref|NM_125228.3| Arabidopsis thaliana structural constituent of ... 46 0.051
29ref|NM_001036769.1| Arabidopsis thaliana structural constituent ... 46 0.051
30ref|NM_120791.2| Arabidopsis thaliana structural constituent of ... 46 0.051
31gb|AY143834.1| Arabidopsis thaliana At5g58420/mqj2_10 mRNA, comp... 46 0.051
32gb|AY079417.1| Arabidopsis thaliana putative 40S ribosomal prote... 46 0.051
33gb|AY050933.1| Arabidopsis thaliana putative 40S ribosomal prote... 46 0.051
34emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, B... 46 0.051
35gb|AY093715.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, co... 46 0.051
36gb|AY070769.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, co... 46 0.051
37gb|AY070467.1| Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, comp... 46 0.051
38gb|AF428285.1|AF428285 Arabidopsis thaliana AT5g58420/mqj2_10 mR... 46 0.051
39emb|BX824247.1|CNS0A6X1 Arabidopsis thaliana Full-length cDNA Co... 46 0.051
40emb|BX832664.1|CNS09ZT5 Arabidopsis thaliana Full-length cDNA Co... 46 0.051
41emb|BX832452.1|CNS09ZTE Arabidopsis thaliana Full-length cDNA Co... 46 0.051
42emb|BX832274.1|CNS09ZPH Arabidopsis thaliana Full-length cDNA Co... 46 0.051
43emb|BX832256.1|CNS09ZVR Arabidopsis thaliana Full-length cDNA Co... 46 0.051
44emb|BX832133.1|CNS09ZP1 Arabidopsis thaliana Full-length cDNA Co... 46 0.051
45emb|BX830283.1|CNS09ZZO Arabidopsis thaliana Full-length cDNA Co... 46 0.051
46emb|BX830139.1|CNS09ZZ0 Arabidopsis thaliana Full-length cDNA Co... 46 0.051
47emb|BX829418.1|CNS09ZZ4 Arabidopsis thaliana Full-length cDNA Co... 46 0.051
48emb|BX832264.1|CNS09ZM6 Arabidopsis thaliana Full-length cDNA Co... 46 0.051
49gb|AY086206.1| Arabidopsis thaliana clone 22434 mRNA, complete s... 46 0.051
50gb|AY085205.1| Arabidopsis thaliana clone 13813 mRNA, complete s... 46 0.051
51dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 46 0.051
52dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 46 0.051
53gb|DQ362415.1| Shigella dysenteriae strain G1274 GcvT (gcvT) gen... 44 0.20
54gb|AC148078.2| Mus musculus BAC clone RP24-186K12 from chromosom... 42 0.80
55ref|XM_657306.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 0.80
56ref|XM_749829.1| Aspergillus fumigatus Af293 cytosolic small rib... 42 0.80
57dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 42 0.80
58gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 3.2
59gb|AC101844.7| Mus musculus chromosome 7, clone RP23-257M22, com... 40 3.2
60gb|AC147681.8| Canis Familiaris, clone XX-10A1, complete sequence 40 3.2
61gb|AC154910.3| Mus musculus BAC clone RP23-70L9 from chromosome ... 40 3.2
62ref|XM_567206.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 3.2
63gb|AC132320.4| Mus musculus BAC clone RP24-259L9 from chromosome... 40 3.2
64gb|BC025658.1| Homo sapiens glycine/arginine rich protein 1, mRN... 40 3.2
65emb|AL731567.6| Human DNA sequence from clone RP11-67C2 on chrom... 40 3.2
66ref|XM_505600.1| Yarrowia lipolytica CLIB122, YALI0F18920g predi... 40 3.2
67ref|XM_795025.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 3.2
68emb|BX293994.28| Zebrafish DNA sequence from clone DKEY-256K14 i... 40 3.2
69gb|AC009806.9| Homo sapiens chromosome 11, clone RP11-51B23, com... 40 3.2
70gb|AC007437.16| Homo sapiens 12q22 BAC RPCI11-541G9 (Roswell Par... 40 3.2
71gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Par... 40 3.2
72dbj|BS000205.2| Pan troglodytes chromosome 22 clone:RP43-093B21,... 40 3.2
73emb|AL096869.8|CNS00YVH Human chromosome 14 DNA sequence BAC R-1... 40 3.2
74gb|AY919674.1| Homo sapiens amyloid beta (A4) precursor protein ... 40 3.2
75gb|AC151990.6| Mus musculus BAC clone RP23-299K14 from chromosom... 40 3.2
76dbj|AP001694.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 3.2
77gb|AF071891.1|AF071891 Prunus armeniaca 40S ribosomal protein S4... 40 3.2
78gb|AC140464.3| Mus musculus BAC clone RP24-383H6 from 12, comple... 40 3.2
79gb|AC102003.5| Mus musculus chromosome 7, clone RP24-488I10, com... 40 3.2
80emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 3.2
81emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chr... 40 3.2
82emb|AL139193.4|CNS01DXA Human chromosome 14 DNA sequence BAC R-6... 40 3.2
83dbj|AP000141.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 40 3.2
84dbj|D87675.1| Homo sapiens DNA for amyloid precursor protein, co... 40 3.2
85dbj|AP001442.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 3.2
86dbj|AP000088.1| Homo sapiens genomic DNA of 21q22.1, APP related... 40 3.2 
>dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds
          Length = 1053

 Score =  353 bits (178), Expect = 2e-94
 Identities = 230/246 (93%), Gaps = 1/246 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    attacatctagcagcatccatgggttcgcaaatcaacaaacatcaggcaaaacttaaaaa 60
            |||||||||||||||| |||||||||| ||| |||||||||||||||||||| |||||||
Sbjct: 1025 attacatctagcagcaaccatgggttcacaattcaacaaacatcaggcaaaatttaaaaa 966

                                                                        
Query: 61   agatggttccaggaacatagttctatatccttgcagataactggctatagcaaaacgact 120
             ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 965  cgatggttccagaaacatagttctatatcctt-cagataactggctatagcaaaacgaat 907

                                                                        
Query: 121  caatgcctcagaatcaggccttggcagcagcctgagctgcggcatccctcttcctctgct 180
            ||| |||||||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 906  caacgcctcagaatcaggccttggcagctgcctgggcagcggcatccctcttcctctgct 847

                                                                        
Query: 181  cctcaatgatggtgagcttgatacccttgcccttggggaggctcacccaaggcttggtgc 240
            ||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||
Sbjct: 846  cctcaatgatggtcagcttgatacctttgcccttggggagggtcacccacggcttggtgc 787

                  
Query: 241  ccttgc 246
            ||||||
Sbjct: 786  ccttgc 781
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score =  131 bits (66), Expect = 1e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                          
Query: 141    ttggcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttg 200
              |||||||||||||| || || ||||||| |||||| |||||||| |||||| ||||||||
Sbjct: 316967 ttggcagcagcctgggcggcagcatcccgcttcctttgctcctcgatgatgctgagcttg 317026

                                                            
Query: 201    atacccttgcccttggggaggctcacccaaggcttggtgcccttgc 246
              || |||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 317027 atgcccttgcccttgggcaggctcacccaaggcttgttgcccttgc 317072



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                      
Query: 77     atagttctatatccttgcagataactggctatagcaaaac 116
              ||||||||||||||||||| | |||| |||||||||||||
Sbjct: 316896 atagttctatatccttgcaaacaactcgctatagcaaaac 316935
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>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1359_D06
          Length = 146805

 Score =  131 bits (66), Expect = 1e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                         
Query: 141   ttggcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttg 200
             |||||||||||||| || || ||||||| |||||| |||||||| |||||| ||||||||
Sbjct: 45751 ttggcagcagcctgggcggcagcatcccgcttcctttgctcctcgatgatgctgagcttg 45810

                                                           
Query: 201   atacccttgcccttggggaggctcacccaaggcttggtgcccttgc 246
             || |||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 45811 atgcccttgcccttgggcaggctcacccaaggcttgttgcccttgc 45856



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 77    atagttctatatccttgcagataactggctatagcaaaac 116
             ||||||||||||||||||| | |||| |||||||||||||
Sbjct: 45680 atagttctatatccttgcaaacaactcgctatagcaaaac 45719
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>dbj|AK103949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B09, full
           insert sequence
          Length = 1016

 Score =  131 bits (66), Expect = 1e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttggcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttg 200
           |||||||||||||| || || ||||||| |||||| |||||||| |||||| ||||||||
Sbjct: 886 ttggcagcagcctgggcggcagcatcccgcttcctttgctcctcgatgatgctgagcttg 827

                                                         
Query: 201 atacccttgcccttggggaggctcacccaaggcttggtgcccttgc 246
           || |||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 826 atgcccttgcccttgggcaggctcacccaaggcttgttgcccttgc 781



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 77  atagttctatatccttgcagataactggctatagcaaaac 116
           ||||||||||||||||||| | |||| |||||||||||||
Sbjct: 957 atagttctatatccttgcaaacaactcgctatagcaaaac 918
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>dbj|AK102423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093E13, full
           insert sequence
          Length = 1157

 Score =  131 bits (66), Expect = 1e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttggcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttg 200
           |||||||||||||| || || ||||||| |||||| |||||||| |||||| ||||||||
Sbjct: 890 ttggcagcagcctgggcggcagcatcccgcttcctttgctcctcgatgatgctgagcttg 831

                                                         
Query: 201 atacccttgcccttggggaggctcacccaaggcttggtgcccttgc 246
           || |||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 830 atgcccttgcccttgggcaggctcacccaaggcttgttgcccttgc 785



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 77  atagttctatatccttgcagataactggctatagcaaaac 116
           ||||||||||||||||||| | |||| |||||||||||||
Sbjct: 961 atagttctatatccttgcaaacaactcgctatagcaaaac 922
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>dbj|AK061776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D06, full
           insert sequence
          Length = 1079

 Score =  131 bits (66), Expect = 1e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttggcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttg 200
           |||||||||||||| || || ||||||| |||||| |||||||| |||||| ||||||||
Sbjct: 882 ttggcagcagcctgggcggcagcatcccgcttcctttgctcctcgatgatgctgagcttg 823

                                                         
Query: 201 atacccttgcccttggggaggctcacccaaggcttggtgcccttgc 246
           || |||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 822 atgcccttgcccttgggcaggctcacccaaggcttgttgcccttgc 777



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 77  atagttctatatccttgcagataactggctatagcaaaac 116
           ||||||||||||||||||| | |||| |||||||||||||
Sbjct: 953 atagttctatatccttgcaaacaactcgctatagcaaaac 914
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>gb|BT016261.1| Zea mays clone Contig94 mRNA sequence
          Length = 1116

 Score =  109 bits (55), Expect = 4e-21
 Identities = 70/75 (93%)
 Strand = Plus / Minus

                                                                       
Query: 172 tcctctgctcctcaatgatggtgagcttgatacccttgcccttggggaggctcacccaag 231
           ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |
Sbjct: 865 tcctctgctcctcgatgatgctgagcttgatacccttgcccttgggcaggctcacccacg 806

                          
Query: 232 gcttggtgcccttgc 246
           ||||| |||||||||
Sbjct: 805 gcttgttgcccttgc 791
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>gb|AF015522.1|AF015522 Zea mays ribsomal protein S4 (rps4) mRNA, complete cds
          Length = 1090

 Score =  109 bits (55), Expect = 4e-21
 Identities = 70/75 (93%)
 Strand = Plus / Minus

                                                                       
Query: 172 tcctctgctcctcaatgatggtgagcttgatacccttgcccttggggaggctcacccaag 231
           ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |
Sbjct: 844 tcctctgctcctcgatgatgctgagcttgatacccttgcccttgggcaggctcacccacg 785

                          
Query: 232 gcttggtgcccttgc 246
           ||||| |||||||||
Sbjct: 784 gcttgttgcccttgc 770
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>ref|NM_193994.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 768

 Score =  101 bits (51), Expect = 1e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                       
Query: 144 gcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttgata 203
           |||||||||||||| || ||||| | ||||||||| ||||| |||||| |||||||||||
Sbjct: 758 gcagcagcctgagcagcagcatctcgcttcctctgttcctcgatgatgctgagcttgata 699

                                                      
Query: 204 cccttgcccttggggaggctcacccaaggcttggtgcccttgc 246
           ||||||||||| |||||   |||||| |||||| |||||||||
Sbjct: 698 cccttgcccttagggagagacacccatggcttgttgcccttgc 656
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>gb|AY525608.1| Zea mays ribosomal protein S4 mRNA, complete cds
          Length = 1037

 Score =  101 bits (51), Expect = 1e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttggcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttg 200
           |||||||||||||| || |||||||||| |||||| ||||| || |||||| | ||||||
Sbjct: 862 ttggcagcagcctgggcagcggcatcccgcttcctttgctcttctatgatgctcagcttg 803

                                              
Query: 201 atacccttgcccttggggaggctcacccaaggctt 235
           || |||||||||||||| ||||||||||| |||||
Sbjct: 802 attcccttgcccttgggcaggctcacccacggctt 768



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 73  gaacatagttctatatccttgcaga 97
           |||||| ||||||||||||||||||
Sbjct: 934 gaacattgttctatatccttgcaga 910
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  101 bits (51), Expect = 1e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                            
Query: 144      gcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttgata 203
                |||||||||||||| || ||||| | ||||||||| ||||| |||||| |||||||||||
Sbjct: 14497969 gcagcagcctgagcagcagcatctcgcttcctctgttcctcgatgatgctgagcttgata 14497910

                                                           
Query: 204      cccttgcccttggggaggctcacccaaggcttggtgcccttgc 246
                ||||||||||| |||||   |||||| |||||| |||||||||
Sbjct: 14497909 cccttgcccttagggagagacacccatggcttgttgcccttgc 14497867
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>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0514H03
          Length = 167230

 Score =  101 bits (51), Expect = 1e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                         
Query: 144   gcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttgata 203
             |||||||||||||| || ||||| | ||||||||| ||||| |||||| |||||||||||
Sbjct: 57282 gcagcagcctgagcagcagcatctcgcttcctctgttcctcgatgatgctgagcttgata 57223

                                                        
Query: 204   cccttgcccttggggaggctcacccaaggcttggtgcccttgc 246
             ||||||||||| |||||   |||||| |||||| |||||||||
Sbjct: 57222 cccttgcccttagggagagacacccatggcttgttgcccttgc 57180
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>emb|Y15009.1|OSY15009 Oryza sativa mRNA for ribosomal protein S4
          Length = 1148

 Score =  101 bits (51), Expect = 1e-18
 Identities = 95/107 (88%), Gaps = 2/107 (1%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttggcagcagcctgagctgcggcatccctcttcctctgctcct-caatgatggtgagctt 199
           |||||||||||||| || || || |||| |||||| ||||||| | |||||| |||||||
Sbjct: 865 ttggcagcagcctgggcggccgc-tcccgcttcctttgctccttcgatgatgctgagctt 807

                                                          
Query: 200 gatacccttgcccttggggaggctcacccaaggcttggtgcccttgc 246
           ||| |||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 806 gatgcccttgcccttgggcaggctcacccaaggcttgttgcccttgc 760



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 37/41 (90%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                    
Query: 77  atagttctatatcc-ttgcagataactggctatagcaaaac 116
           |||||||||||||| ||||| | |||| |||||||||||||
Sbjct: 937 atagttctatatcctttgcaaacaactcgctatagcaaaac 897
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>dbj|AK061826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C06, full
           insert sequence
          Length = 1035

 Score =  101 bits (51), Expect = 1e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                       
Query: 144 gcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttgata 203
           |||||||||||||| || ||||| | ||||||||| ||||| |||||| |||||||||||
Sbjct: 875 gcagcagcctgagcagcagcatctcgcttcctctgttcctcgatgatgctgagcttgata 816

                                                      
Query: 204 cccttgcccttggggaggctcacccaaggcttggtgcccttgc 246
           ||||||||||| |||||   |||||| |||||| |||||||||
Sbjct: 815 cccttgcccttagggagagacacccatggcttgttgcccttgc 773
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>gb|AF013487.1|AF013487 Zea mays ribosomal protein S4 type I (rps4) mRNA, complete cds
          Length = 1013

 Score =  101 bits (51), Expect = 1e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                       
Query: 141 ttggcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttg 200
           |||||||||||||| || |||||||||| |||||| ||||| || |||||| | ||||||
Sbjct: 864 ttggcagcagcctgggcagcggcatcccgcttcctttgctcttctatgatgctcagcttg 805

                                              
Query: 201 atacccttgcccttggggaggctcacccaaggctt 235
           || |||||||||||||| ||||||||||| |||||
Sbjct: 804 attcccttgcccttgggcaggctcacccacggctt 770



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 73  gaacatagttctatatccttgcaga 97
           |||||| ||||||||||||||||||
Sbjct: 936 gaacattgttctatatccttgcaga 912
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>gb|BT017558.1| Zea mays clone EL01N0424H12.c mRNA sequence
          Length = 1145

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 141 ttggcagcagcctgagctgcggcatccctcttcctctgctcctcaatgatggtgagcttg 200
           |||||||||||||| || || ||||||| |||||| ||||| || |||||| | ||||||
Sbjct: 178 ttggcagcagcctgggcagcagcatcccgcttcctttgctcttctatgatgctcagcttg 237

                                              
Query: 201 atacccttgcccttggggaggctcacccaaggctt 235
           || ||||| |||||||| ||||||||||| |||||
Sbjct: 238 attcccttacccttgggcaggctcacccacggctt 272



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 72  ggaacatagttctatatccttgcaga 97
           ||||||| ||||||||||||||||||
Sbjct: 105 ggaacattgttctatatccttgcaga 130
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>ref|XM_475130.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 738

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                              
Query: 170 cttcctctgctcctcaatgatggtgagcttgatacccttgcccttggggag 220
           |||||||  ||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 708 cttcctcgcctcctcaatgatgctgagcttgatgcccttgcccttggggag 658
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>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07,
             complete sequence
          Length = 159932

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                
Query: 170   cttcctctgctcctcaatgatggtgagcttgatacccttgcccttggggag 220
             |||||||  ||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 81033 cttcctcgcctcctcaatgatgctgagcttgatgcccttgcccttggggag 80983
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                   
Query: 170      cttcctctgctcctcaatgatggtgagcttgatacccttgcccttggggag 220
                |||||||  ||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 17551228 cttcctcgcctcctcaatgatgctgagcttgatgcccttgcccttggggag 17551178
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>dbj|AK071862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123J20, full
           insert sequence
          Length = 1162

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                              
Query: 170 cttcctctgctcctcaatgatggtgagcttgatacccttgcccttggggag 220
           |||||||  ||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 860 cttcctcgcctcctcaatgatgctgagcttgatgcccttgcccttggggag 810
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>ref|XM_366671.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG02747.4) partial mRNA
          Length = 735

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 gctcctcaatgatggtgagcttgatacccttgcccttggg 217
           ||||||||  |||||||||||||| |||||||||||||||
Sbjct: 697 gctcctcagcgatggtgagcttgacacccttgcccttggg 658
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>ref|XM_388890.1| Gibberella zeae PH-1 chromosome 2 conserved hypothetical protein
           (FG08714.1) partial mRNA
          Length = 732

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 gctcctcaatgatggtgagcttgatacccttgcccttggg 217
           ||||||||  |||||||||||||| |||||||||||||||
Sbjct: 697 gctcctcagcgatggtgagcttgacacccttgcccttggg 658
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>gb|AY850339.1| Magnaporthe grisea 40S ribosomal protein S4-A-like protein mRNA,
           complete cds
          Length = 1024

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 gctcctcaatgatggtgagcttgatacccttgcccttggg 217
           ||||||||  |||||||||||||| |||||||||||||||
Sbjct: 766 gctcctcagcgatggtgagcttgacacccttgcccttggg 727
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>dbj|AB232685.1| Panax ginseng mRNA for ribosomal protein S4, complete cds
          Length = 1105

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           ||||||||||||||| |  ||||||||||||||||||||
Sbjct: 840 ctcctcaatgatggttaatttgatacccttgcccttggg 802
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>ref|XM_502766.1| Yarrowia lipolytica CLIB122, YALI0D12903g predicted mRNA
          Length = 783

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 189 atggtgagcttgatacccttgcccttggg 217
           |||| ||||||||||||||||||||||||
Sbjct: 743 atggagagcttgatacccttgcccttggg 715
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>gb|AF054511.1|AF054511 Yarrowia lipolytica ribosomal protein S7 (RPS7) mRNA, complete cds
          Length = 852

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 189 atggtgagcttgatacccttgcccttggg 217
           |||| ||||||||||||||||||||||||
Sbjct: 745 atggagagcttgatacccttgcccttggg 717
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 189     atggtgagcttgatacccttgcccttggg 217
               |||| ||||||||||||||||||||||||
Sbjct: 1601891 atggagagcttgatacccttgcccttggg 1601919
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>ref|NM_125228.3| Arabidopsis thaliana structural constituent of ribosome AT5G58420
           mRNA, complete cds
          Length = 1080

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 846 ctcctcgatgatagtcagcttgatacctttgcccttggg 808
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>ref|NM_001036769.1| Arabidopsis thaliana structural constituent of ribosome AT5G07090
           transcript variant AT5G07090.2 mRNA, complete cds
          Length = 1174

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 180 tcctcaatgatggtgagcttgatacccttgccctt 214
           |||||||||||||| ||||| ||||| ||||||||
Sbjct: 864 tcctcaatgatggtcagcttaatacctttgccctt 830
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>ref|NM_120791.2| Arabidopsis thaliana structural constituent of ribosome AT5G07090
           transcript variant AT5G07090.1 mRNA, complete cds
          Length = 1088

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 180 tcctcaatgatggtgagcttgatacccttgccctt 214
           |||||||||||||| ||||| ||||| ||||||||
Sbjct: 779 tcctcaatgatggtcagcttaatacctttgccctt 745
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>gb|AY143834.1| Arabidopsis thaliana At5g58420/mqj2_10 mRNA, complete cds
          Length = 789

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 753 ctcctcgatgatagtcagcttgatacctttgcccttggg 715
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>gb|AY079417.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090)
           mRNA, complete cds
          Length = 820

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 180 tcctcaatgatggtgagcttgatacccttgccctt 214
           |||||||||||||| ||||| ||||| ||||||||
Sbjct: 752 tcctcaatgatggtcagcttaatacctttgccctt 718
to top
>gb|AY050933.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090)
           mRNA, complete cds
          Length = 1059

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 180 tcctcaatgatggtgagcttgatacccttgccctt 214
           |||||||||||||| ||||| ||||| ||||||||
Sbjct: 776 tcctcaatgatggtcagcttaatacctttgccctt 742
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>emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, BAC clone T28J14 (ESSA
            project)
          Length = 104607

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 180  tcctcaatgatggtgagcttgatacccttgccctt 214
            |||||||||||||| ||||| ||||| ||||||||
Sbjct: 8021 tcctcaatgatggtcagcttaatacctttgccctt 7987
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>gb|AY093715.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds
          Length = 789

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 180 tcctcaatgatggtgagcttgatacccttgccctt 214
           |||||||||||||| ||||| ||||| ||||||||
Sbjct: 752 tcctcaatgatggtcagcttaatacctttgccctt 718
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>gb|AY070769.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds
          Length = 1008

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 180 tcctcaatgatggtgagcttgatacccttgccctt 214
           |||||||||||||| ||||| ||||| ||||||||
Sbjct: 776 tcctcaatgatggtcagcttaatacctttgccctt 742
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>gb|AY070467.1| Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds
          Length = 995

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 826 ctcctcgatgatagtcagcttgatacctttgcccttggg 788
to top
>gb|AF428285.1|AF428285 Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds
          Length = 1005

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 837 ctcctcgatgatagtcagcttgatacctttgcccttggg 799
to top
>emb|BX824247.1|CNS0A6X1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH32ZH05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1168

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 180 tcctcaatgatggtgagcttgatacccttgccctt 214
           |||||||||||||| ||||| ||||| ||||||||
Sbjct: 229 tcctcaatgatggtcagcttaatacctttgccctt 263
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>emb|BX832664.1|CNS09ZT5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH87ZG07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 976

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 180 tcctcaatgatggtgagcttgatacccttgccctt 214
           |||||||||||||| ||||| ||||| ||||||||
Sbjct: 746 tcctcaatgatggtcagcttaatacctttgccctt 712
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>emb|BX832452.1|CNS09ZTE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH74ZD04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 942

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 180 tcctcaatgatggtgagcttgatacccttgccctt 214
           |||||||||||||| ||||| ||||| ||||||||
Sbjct: 750 tcctcaatgatggtcagcttaatacctttgccctt 716
to top
>emb|BX832274.1|CNS09ZPH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH62ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 978

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 847 ctcctcgatgatagtcagcttgatacctttgcccttggg 809
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>emb|BX832256.1|CNS09ZVR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 952

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 180 tcctcaatgatggtgagcttgatacccttgccctt 214
           |||||||||||||| ||||| ||||| ||||||||
Sbjct: 739 tcctcaatgatggtcagcttaatacctttgccctt 705
to top
>emb|BX832133.1|CNS09ZP1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH53ZH10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 537

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 366 ctcctcgatgatagtcagcttgatacctttgcccttggg 328
to top
>emb|BX830283.1|CNS09ZZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB70ZD03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 988

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 817 ctcctcgatgatagtcagcttgatacctttgcccttggg 779
to top
>emb|BX830139.1|CNS09ZZ0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB61ZG04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 737

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 566 ctcctcgatgatagtcagcttgatacctttgcccttggg 528
to top
>emb|BX829418.1|CNS09ZZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB12ZD07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 566

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 395 ctcctcgatgatagtcagcttgatacctttgcccttggg 357
to top
>emb|BX832264.1|CNS09ZM6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZG11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 997

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 826 ctcctcgatgatagtcagcttgatacctttgcccttggg 788
to top
>gb|AY086206.1| Arabidopsis thaliana clone 22434 mRNA, complete sequence
          Length = 1010

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 179 ctcctcaatgatggtgagcttgatacccttgcccttggg 217
           |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 841 ctcctcgatgatagtcagcttgatacctttgcccttggg 803
to top
>gb|AY085205.1| Arabidopsis thaliana clone 13813 mRNA, complete sequence
          Length = 1011

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 180 tcctcaatgatggtgagcttgatacccttgccctt 214
           |||||||||||||| ||||| ||||| ||||||||
Sbjct: 779 tcctcaatgatggtcagcttaatacctttgccctt 745
to top
>dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ2
          Length = 51440

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 179  ctcctcaatgatggtgagcttgatacccttgcccttggg 217
            |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 6898 ctcctcgatgatagtcagcttgatacctttgcccttggg 6860
to top
>dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOJ9
          Length = 86380

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 180   tcctcaatgatggtgagcttgatacccttgccctt 214
             |||||||||||||| ||||| ||||| ||||||||
Sbjct: 82744 tcctcaatgatggtcagcttaatacctttgccctt 82710
to top
>gb|DQ362415.1| Shigella dysenteriae strain G1274 GcvT (gcvT) gene, partial cds
          Length = 416

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 23  ggttcgcaaatcaacaaacatcaggc 48
           |||||||||||| |||||||||||||
Sbjct: 88  ggttcgcaaatcgacaaacatcaggc 113
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>gb|AC148078.2| Mus musculus BAC clone RP24-186K12 from chromosome 13, complete sequence
          Length = 149455

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 211    ccttggggaggctcacccaag 231
              |||||||||||||||||||||
Sbjct: 134897 ccttggggaggctcacccaag 134877
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>ref|XM_657306.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4794.2), mRNA
          Length = 720

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 189 atggtgagcttgatacccttgcccttggg 217
           |||| |||||||| |||||||||||||||
Sbjct: 674 atggagagcttgacacccttgcccttggg 646
to top
>ref|XM_749829.1| Aspergillus fumigatus Af293 cytosolic small ribosomal subunit S4
           (Afu3g06840) partial mRNA
          Length = 786

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 189 atggtgagcttgatacccttgcccttggg 217
           ||||||||||| | |||||||||||||||
Sbjct: 740 atggtgagcttaacacccttgcccttggg 712
to top
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 197    cttgatacccttgcccttggggagg 221
              ||||| |||||||||||||||||||
Sbjct: 775952 cttgacacccttgcccttggggagg 775976
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 194     gagcttgatacccttgcccttggg 217
               |||||||| |||||||||||||||
Sbjct: 1677741 gagcttgacacccttgcccttggg 1677718
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>gb|AC101844.7| Mus musculus chromosome 7, clone RP23-257M22, complete sequence
          Length = 197827

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   cttcctctgctcctcaatga 189
             ||||||||||||||||||||
Sbjct: 23788 cttcctctgctcctcaatga 23769
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>gb|AC147681.8| Canis Familiaris, clone XX-10A1, complete sequence
          Length = 160031

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   tccctcttcctctgctcctc 184
             ||||||||||||||||||||
Sbjct: 75373 tccctcttcctctgctcctc 75392
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>gb|AC154910.3| Mus musculus BAC clone RP23-70L9 from chromosome 12, complete sequence
          Length = 243671

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     ggttccaggaacatagttct 84
              ||||||||||||||||||||
Sbjct: 192051 ggttccaggaacatagttct 192032
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>ref|XM_567206.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNA06200) partial mRNA
          Length = 840

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 194 gagcttgatacccttgcccttggg 217
           |||||||| |||||||||||||||
Sbjct: 738 gagcttgacacccttgcccttggg 715
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>gb|AC132320.4| Mus musculus BAC clone RP24-259L9 from chromosome 18, complete sequence
          Length = 156239

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   ctcttcctctgctcctcaat 187
             ||||||||||||||||||||
Sbjct: 47354 ctcttcctctgctcctcaat 47335
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>gb|BC025658.1| Homo sapiens glycine/arginine rich protein 1, mRNA (cDNA clone
           MGC:34152 IMAGE:5198480), complete cds
          Length = 1554

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 131 gaatcaggccttggcagcagcctg 154
           |||||||||||||||||| |||||
Sbjct: 421 gaatcaggccttggcagccgcctg 398
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>emb|AL731567.6| Human DNA sequence from clone RP11-67C2 on chromosome 10 Contains the
             ALOX5 gene for arachidonate 5-lipoxygenase, a novel gene,
             the 3' end of a gene for cellular modulator of immune
             recognition (c-MIR) and five CpG islands, complete
             sequence
          Length = 129266

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 81    ttctatatccttgcagataactgg 104
             |||||||||||| |||||||||||
Sbjct: 81474 ttctatatccttacagataactgg 81451
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>ref|XM_505600.1| Yarrowia lipolytica CLIB122, YALI0F18920g predicted mRNA
          Length = 1485

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 170  cttcctctgctcctcaatga 189
            ||||||||||||||||||||
Sbjct: 1026 cttcctctgctcctcaatga 1007
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>ref|XM_795025.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC581083 (LOC581083), mRNA
          Length = 1197

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 165 tccctcttcctctgctcctc 184
           ||||||||||||||||||||
Sbjct: 764 tccctcttcctctgctcctc 745
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>emb|BX293994.28| Zebrafish DNA sequence from clone DKEY-256K14 in linkage group 10,
             complete sequence
          Length = 210640

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   tcttcctctgctcctcaatg 188
             ||||||||||||||||||||
Sbjct: 25208 tcttcctctgctcctcaatg 25189
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>gb|AC009806.9| Homo sapiens chromosome 11, clone RP11-51B23, complete sequence
          Length = 175223

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     cttaaaaaagatggttccag 72
              ||||||||||||||||||||
Sbjct: 158366 cttaaaaaagatggttccag 158385
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>gb|AC007437.16| Homo sapiens 12q22 BAC RPCI11-541G9 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 179854

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 216   gggaggctcacccaaggcttggtg 239
             |||||||||||||||| |||||||
Sbjct: 12827 gggaggctcacccaagccttggtg 12850
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>gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 171236

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 216    gggaggctcacccaaggcttggtg 239
              |||||||||||||||| |||||||
Sbjct: 157441 gggaggctcacccaagccttggtg 157464
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>dbj|BS000205.2| Pan troglodytes chromosome 22 clone:RP43-093B21, map 22, complete
              sequences
          Length = 203521

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     tagttctatatccttgcaga 97
              ||||||||||||||||||||
Sbjct: 130844 tagttctatatccttgcaga 130825
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>emb|AL096869.8|CNS00YVH Human chromosome 14 DNA sequence BAC R-1078H9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 228097

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   ctcttcctctgctcctcaat 187
             ||||||||||||||||||||
Sbjct: 63018 ctcttcctctgctcctcaat 62999
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>gb|AY919674.1| Homo sapiens amyloid beta (A4) precursor protein (protease nexin-II,
              Alzheimer disease) (APP) gene, complete cds
          Length = 293960

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     tagttctatatccttgcaga 97
              ||||||||||||||||||||
Sbjct: 254416 tagttctatatccttgcaga 254435
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>gb|AC151990.6| Mus musculus BAC clone RP23-299K14 from chromosome 18, complete
             sequence
          Length = 205253

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   ctcttcctctgctcctcaat 187
             ||||||||||||||||||||
Sbjct: 62232 ctcttcctctgctcctcaat 62251
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>dbj|AP001694.1| Homo sapiens genomic DNA, chromosome 21q, section 38/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     tagttctatatccttgcaga 97
              ||||||||||||||||||||
Sbjct: 325187 tagttctatatccttgcaga 325168
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>gb|AF071891.1|AF071891 Prunus armeniaca 40S ribosomal protein S4 (RPS4) mRNA, complete cds
          Length = 1086

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 183 tcaatgatggtgagcttgatacccttgcccttggggaggctcacccaaggcttggtgccc 242
           |||| |||||| ||||||||||| || |||||||| ||   ||||||||| || || |||
Sbjct: 783 tcaaggatggttagcttgatacctttccccttgggaagagacacccaaggttttgtaccc 724

               
Query: 243 ttgc 246
           ||||
Sbjct: 723 ttgc 720
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>gb|AC140464.3| Mus musculus BAC clone RP24-383H6 from 12, complete sequence
          Length = 113482

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ggttccaggaacatagttct 84
             ||||||||||||||||||||
Sbjct: 64196 ggttccaggaacatagttct 64177
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>gb|AC102003.5| Mus musculus chromosome 7, clone RP24-488I10, complete sequence
          Length = 150428

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    cttcctctgctcctcaatga 189
              ||||||||||||||||||||
Sbjct: 147440 cttcctctgctcctcaatga 147421
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 170     cttcctctgctcctcaatga 189
               ||||||||||||||||||||
Sbjct: 2525910 cttcctctgctcctcaatga 2525929
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>emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chromosome 7, complete
              sequence
          Length = 215366

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    tgcccttggggaggctcacc 227
              ||||||||||||||||||||
Sbjct: 213316 tgcccttggggaggctcacc 213297
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>emb|AL139193.4|CNS01DXA Human chromosome 14 DNA sequence BAC R-661G16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 162691

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   ctcttcctctgctcctcaat 187
             ||||||||||||||||||||
Sbjct: 27574 ctcttcctctgctcctcaat 27593
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>dbj|AP000141.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone
             B2291C14-R44F3, segment 6/10, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    tagttctatatccttgcaga 97
             ||||||||||||||||||||
Sbjct: 24483 tagttctatatccttgcaga 24464
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>dbj|D87675.1| Homo sapiens DNA for amyloid precursor protein, complete cds
          Length = 301692

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     tagttctatatccttgcaga 97
              ||||||||||||||||||||
Sbjct: 258129 tagttctatatccttgcaga 258148
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>dbj|AP001442.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:T1715,
            LL56-APP region, complete sequence
          Length = 68001

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 78   tagttctatatccttgcaga 97
            ||||||||||||||||||||
Sbjct: 7611 tagttctatatccttgcaga 7592
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>dbj|AP000088.1| Homo sapiens genomic DNA of 21q22.1, APP related, B2291C14-T1533 region,
              segment 5/7
          Length = 161014

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     tagttctatatccttgcaga 97
              ||||||||||||||||||||
Sbjct: 124483 tagttctatatccttgcaga 124464


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,539,013
Number of Sequences: 3902068
Number of extensions: 2539013
Number of successful extensions: 54247
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54050
Number of HSP's gapped (non-prelim): 194
length of query: 246
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 224
effective length of database: 17,147,199,772
effective search space: 3840972748928
effective search space used: 3840972748928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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